>RL34_TOBAC (P41098) 60S ribosomal protein L34|
          Length = 120

 Score =  153 bits (387), Expect = 3e-37
 Identities = 79/96 (82%), Positives = 83/96 (86%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           MVQRLTYR   +    S    RVVKTPGGKL+YQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1   MVQRLTYRKRHSYATKS-NQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           TEYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAF
Sbjct: 60  TEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

>RL34_PEA (P40590) 60S ribosomal protein L34|
          Length = 120

 Score =  152 bits (385), Expect = 5e-37
 Identities = 80/96 (83%), Positives = 82/96 (85%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           MVQRLTYR   +    S    RVVKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1   MVQRLTYRRRHSYATKS-NQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           TEYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 60  TEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

>RL34_ARATH (Q42351) 60S ribosomal protein L34|
          Length = 120

 Score =  150 bits (379), Expect = 2e-36
 Identities = 77/96 (80%), Positives = 82/96 (85%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           MVQRL YR   +    S    R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1   MVQRLVYRSRHSYATKS-NQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           +EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAF
Sbjct: 60  SEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

>RL34A_SCHPO (O42846) 60S ribosomal protein L34-A|
          Length = 112

 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 47/96 (48%), Positives = 62/96 (64%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           M QR+TYR    A       TR++KTPG  + Y + KK  + P+C  TG  +QGIP LRP
Sbjct: 1   MAQRVTYRRR-LAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
            E+  +RLS N++TV R YGG LS  AV++RI+RAF
Sbjct: 60  REF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93

>RL34B_SCHPO (Q9URT8) 60S ribosomal protein L34-B (60S ribosomal protein L34-2)|
          Length = 111

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 46/96 (47%), Positives = 61/96 (63%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           M QR+TYR    A       TR++KTPG  + Y + KK  + P+C  TG  +QGIP LRP
Sbjct: 1   MAQRVTYRRR-LAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
            E+  +RLS N++ V R YGG LS  AV++RI+RAF
Sbjct: 60  REF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93

>RL34_AEDAL (P45842) 60S ribosomal protein L34 (L31)|
          Length = 129

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 47/95 (49%), Positives = 59/95 (62%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 209
           VQRLT R   +    S    RVV+TPGG+LVY Y KK+ + PKC    +K+ GI   RP+
Sbjct: 1   VQRLTLRRRLSYNTKS-NKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPS 59

Query: 210 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct: 60  E--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92

>RL34_AEDTR (Q9NB34) 60S ribosomal protein L34|
          Length = 138

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 47/95 (49%), Positives = 59/95 (62%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 209
           VQRLT R   +    S    RVV+TPGG+LVY Y KK+ + PKC    +K+ GI   RP+
Sbjct: 1   VQRLTLRRRLSYNTKS-NKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPS 59

Query: 210 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct: 60  E--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92

>RL34A_YEAST (P87262) 60S ribosomal protein L34-A|
          Length = 121

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 44/96 (45%), Positives = 57/96 (59%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           M QR+T+R        S    +VVKTPGG L  Q+ KK A+ PKC   G  +QGI  LRP
Sbjct: 1   MAQRVTFRRRNPYNTRS-NKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
            +Y  + +S+  +TV+R YGG      V+ERIIRAF
Sbjct: 60  RQY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93

>RL34B_YEAST (P40525) 60S ribosomal protein L34-B|
          Length = 121

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 43/96 (44%), Positives = 57/96 (59%)
 Frame = +3

Query: 27  MVQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 206
           M QR+T+R        S    +VVKTPGG L  Q+ KK A+ PKC   G  +QGI  LRP
Sbjct: 1   MAQRVTFRRRNPYNTRS-NKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRP 59

Query: 207 TEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
            +Y  + +S+  +TV+R YGG      V+ERI+RAF
Sbjct: 60  RQY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93

>RL34_ICTPU (Q90YT5) 60S ribosomal protein L34|
          Length = 116

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C +   +++GI  +R
Sbjct: 1   VQRLTYRRT-VSYNTTSNKTRLSRTPGNRIVYLYTKKTGKAPKSACGICPGRLRGIRAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P    R  LS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 60  PQVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_BRARE (Q7ZWJ7) 60S ribosomal protein L34|
          Length = 116

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C +   +++GI  +R
Sbjct: 1   VQRLTYRRR-LSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P    R  LS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 60  PQVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_HUMAN (P49207) 60S ribosomal protein L34|
          Length = 116

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C V   +++G+  +R
Sbjct: 1   VQRLTYRRR-LSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P    R  LS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 60  PKVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_MOUSE (Q9D1R9) 60S ribosomal protein L34|
          Length = 116

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C V   +++G+  +R
Sbjct: 1   VQRLTYRRR-LSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P    R  LS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 60  PKVLMR--LSKTQKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_ENCCU (Q8SSA2) 60S ribosomal protein L34|
          Length = 110

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 32/75 (42%), Positives = 42/75 (56%)
 Frame = +3

Query: 90  RVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGG 269
           R V+TP GKLV +  KK +   +C      +  I  +RP E+ R ++S  R  VNRPYG 
Sbjct: 20  RKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAEFSRQKVSARR--VNRPYGA 77

Query: 270 VLSGTAVRERIIRAF 314
              G  VRE+II AF
Sbjct: 78  TTCGRCVREKIISAF 92

>RL34_METJA (P54053) 50S ribosomal protein L34e|
          Length = 89

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 24/70 (34%), Positives = 43/70 (61%)
 Frame = +3

Query: 99  KTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 278
           +TPGG++V  Y +++   PKC + G ++ G+P  RP E +  +L +++R   RPYGG L 
Sbjct: 17  RTPGGRIVIHYKRRKPGKPKCAICGAELHGVPRGRPVEIR--KLPKSQRRPERPYGGYLC 74

Query: 279 GTAVRERIIR 308
              ++  +I+
Sbjct: 75  PRCLKRLMIQ 84

>RL34_METTH (O26137) 50S ribosomal protein L34e|
          Length = 88

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = +3

Query: 99  KTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 278
           KTPGG+ V  Y +K+ S   C   GK + G+P  RP  Y+  +LS++++  NRPYGG   
Sbjct: 17  KTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRP--YEIRKLSKSKKRPNRPYGGYYC 74

Query: 279 GTAVRE 296
            +  R+
Sbjct: 75  SSCARK 80

>RL34_AERPE (P58026) 50S ribosomal protein L34e|
          Length = 95

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 26/71 (36%), Positives = 38/71 (53%)
 Frame = +3

Query: 99  KTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 278
           +TPGG  V  Y +++    +C   G+ + G+P  RP   +  RLS+  +   RPYGGVL 
Sbjct: 22  RTPGGSTVVHYERRKPGPARCARCGRPLGGVPRGRPPRVR--RLSKTAKRPERPYGGVLC 79

Query: 279 GTAVRERIIRA 311
            T + E I  A
Sbjct: 80  STCLAEMIFEA 90

>RL34_METKA (Q8TZB2) 50S ribosomal protein L34e|
          Length = 113

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 25/68 (36%), Positives = 38/68 (55%)
 Frame = +3

Query: 99  KTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 278
           +TPGG+ V  + KK  + PKC   G+++ G+   R  E K +   + ++  NRPYGGVL 
Sbjct: 17  RTPGGRTVIHFEKKIPNWPKCGACGRRLNGVMRGRNVELKNA--PKTQKRPNRPYGGVLC 74

Query: 279 GTAVRERI 302
               R+ I
Sbjct: 75  PECARKLI 82

>RL34_PIG (Q29223) 60S ribosomal protein L34|
          Length = 116

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C V   +++G+  +R
Sbjct: 1   VQRLTYRRR-LSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P      RLS+ ++ V            VR+R  RAF
Sbjct: 60  PKVL--MRLSKTKKHVQPGLWWFHVAKCVRDRXKRAF 94

>RL34_PYRAE (Q8ZTJ2) 50S ribosomal protein L34e|
          Length = 84

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 27/61 (44%), Positives = 32/61 (52%)
 Frame = +3

Query: 96  VKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVL 275
           VKTPGG+ V  Y K+    PKCP+TG  I G+        K  R     R  +RPYGGV 
Sbjct: 16  VKTPGGRTVIHYEKRAKGVPKCPITGLPIGGM------NKKVYRFGIKIRAPSRPYGGVY 69

Query: 276 S 278
           S
Sbjct: 70  S 70

>RL34_RAT (P11250) 60S ribosomal protein L34|
          Length = 116

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  VQRLTYRXXGTAMPPSPTXTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 203
           VQRLTYR    +   +   TR+ +TPG ++VY YTKK    PK  C V   +++G+  +R
Sbjct: 1   VQRLTYRRR-LSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVLPGRLRGVVAVR 59

Query: 204 PTEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 314
           P      RLS+ ++ V +    +       +RI RAF
Sbjct: 60  PKVL--MRLSKTKKHVQQGLWWLHVRQVCPDRIKRAF 94

>RL34_PYRAB (Q9UZJ7) 50S ribosomal protein L34e|
          Length = 91

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = +3

Query: 90  RVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPY 263
           + V+TPGG++V  + +++     C + G+ + GIP  RP E +  +L + ++   RPY
Sbjct: 13  KYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMR--KLPKTKKRPERPY 68

>RL34_PYRHO (O74006) 50S ribosomal protein L34e|
          Length = 91

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 90  RVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPY 263
           + V+TPGG++V  + +K+     C + G+ + GIP  RP E ++   ++ R     PY
Sbjct: 13  KYVRTPGGRVVVHFERKKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKKRPERPMPY 70

>RL34_PYRKO (Q5JJF7) 50S ribosomal protein L34e|
          Length = 90

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 90  RVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPY 263
           + V+TPGG+ V  + +++     C + G+ + G+P  RP+E +  +L + ++   RPY
Sbjct: 13  KYVRTPGGRTVIHFERRKPKVAHCAMCGRPLNGVPRGRPSELR--KLPKTKKRPERPY 68

>RL34_PYRFU (Q8U2L3) 50S ribosomal protein L34e|
          Length = 89

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +3

Query: 90  RVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRP 260
           + V+TPGG++V  + +K+     C + G+ + GIP  RP E +  +L + ++   RP
Sbjct: 13  KYVRTPGGRVVIHFERKKPKIAHCAMCGRPLNGIPRGRPVEMR--KLPKTKKRPERP 67

>RL34_SULSO (Q97ZQ6) 50S ribosomal protein L34e|
          Length = 88

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +3

Query: 96  VKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVL 275
           VK P GK V  Y +KR     C +  K + G+     T +   + S++ +   RP+GG L
Sbjct: 16  VKLPSGKTVIHYERKRNDIAICAICKKPLHGV----KTNFLH-KYSKSEKRPERPFGGYL 70

Query: 276 SGTAVRERI 302
             + + + I
Sbjct: 71  CSSCLTQLI 79

>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 475  TKPLIITTNKNIFLVYRIPSHFALPFQTDYFEVVLSL 365
            T PL +TT+K+  L YR PS  A P   D   + LSL
Sbjct: 2719 TSPLQLTTSKHTELQYRKPSSQAFPMIRDEAPINLSL 2755

>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 475  TKPLIITTNKNIFLVYRIPSHFALPFQTDYFEVVLSL 365
            T PL +TT+K+  L YR PS  A P   D   + LSL
Sbjct: 2765 TSPLQLTTSKHTELPYRKPSSQAFPTIRDEAPINLSL 2801


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,741,129
Number of Sequences: 219361
Number of extensions: 1614033
Number of successful extensions: 4450
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4424
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)