ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal1g22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017448.1| Zea mays clone EL01N0406C01.c mRNA sequence Length = 770 Score = 422 bits (213), Expect = e-115 Identities = 325/359 (90%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 66 atggtgcagcgtctgacctaccg-caagc-ggcacagctatgccacgaagtccaaccag- 122 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 123 acgcgggtcgtcaagacccctggtggcaagctcgtgtaccagtacaccaagaagagagcc 182 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| |||||||| || ||||||||||||||||||||||| |||||||| || ||||| Sbjct: 183 agcgggcccaagtgtcccgtgaccgggaagaagatccagggcattccccatctgaggcca 242 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| |||||||| || ||| |||||||||||||||| |||||||||||||||||||| Sbjct: 243 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgtccctatggg 302 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 ||||| || |||||||||||||| || ||||||||||||||||||||| ||||||| ||| Sbjct: 303 ggagtactatctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 362 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctcaaa 385 ||||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 363 cagaagattgtcaagaaggtgttgaaattacagaagaccaaagacaagacttcctcaaa 421
>gb|AY104935.1| Zea mays PCO108550 mRNA sequence Length = 762 Score = 422 bits (213), Expect = e-115 Identities = 325/359 (90%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 94 atggtgcagcgtctgacctaccg-caagc-ggcacagctatgccacgaagtccaaccag- 150 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 151 acgcgggtcgtcaagacccctggtggcaagctcgtgtaccagtacaccaagaagagagcc 210 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| |||||||| || ||||||||||||||||||||||| |||||||| || ||||| Sbjct: 211 agcgggcccaagtgtcccgtgaccgggaagaagatccagggcattccccatctgaggcca 270 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| |||||||| || ||| |||||||||||||||| |||||||||||||||||||| Sbjct: 271 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgtccctatggg 330 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 ||||| || |||||||||||||| || ||||||||||||||||||||| ||||||| ||| Sbjct: 331 ggagtactatctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 390 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctcaaa 385 ||||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 391 cagaagattgtcaagaaggtgttgaaattacagaagaccaaagacaagacttcctcaaa 449
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 647 Score = 379 bits (191), Expect = e-102 Identities = 313/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| || ||||||||| ||| | |||||||| || || ||||| |||||| Sbjct: 75 atggtgcagcggctcacctaccgg-aagc-gtcacagctacgcgactaagtcgaaccag- 131 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 || |||||||||||||||||||||| | ||| |||||||||||||| |||||||||||| Sbjct: 132 accagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcg 191 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| || |||||||| || |||||||||||||||||||| ||||||||| | |||||| Sbjct: 192 agcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcct 251 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| ||||| || || ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 252 gctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggt 311 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 312 ggagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggag 371 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 376 ||||||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct: 372 cagaagattgtcaagaaggtcctgaaaatacagaaaaccaaggacaagac 421
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full insert sequence Length = 647 Score = 371 bits (187), Expect = 2e-99 Identities = 312/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| || ||||||||| ||| | |||||||| || || ||||| |||||| Sbjct: 75 atggtgcagcggctcacctaccgg-aagc-gtcacagctacgcgactaagtcgaaccag- 131 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 || |||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||| Sbjct: 132 accagggtcgtcaagatcccaggtgggaggcttgtgtaccagtacacgaagaagagggcg 191 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| || |||||||| || |||||||||||||||||||| ||||||||| | |||||| Sbjct: 192 agcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcct 251 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| ||||| || || ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 252 gctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggt 311 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 312 ggagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggag 371 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 376 ||||||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct: 372 cagaagattgtcaagaaggtcctgaaaatacagaaaaccaaggacaagac 421
>gb|BT017980.1| Zea mays clone EL01N0525C04.c mRNA sequence Length = 722 Score = 307 bits (155), Expect = 2e-80 Identities = 288/331 (87%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 59 cacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaagct 118 |||||||| || || |||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 103 cacagctacgctacgaagtccaaccag-acccgagtcgtcaagaccccaggcgggaagct 161 Query: 119 cgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaagaa 178 |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 162 tgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccgtcaccgggaagaa 221 Query: 179 gatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaa 238 |||||||| || || ||| | |||||| |||| |||||||| || ||| || |||||| Sbjct: 222 aatccaggggatccctcacttgaggcctgctgagtacaaaaggtccaggttgcctaggag 281 Query: 239 ccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaag 298 ||||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||| || Sbjct: 282 ccgcaggactgtgaaccgtccttatggtggagtactctctggaattgctgttagggagag 341 Query: 299 gatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaataca 358 ||||| ||||| |||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 342 aatcattcgtgccttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaataca 401 Query: 359 gaagaccaaggacaagacgacctcaaagtaa 389 || |||||||||||||| || |||||||| Sbjct: 402 aaaaaccaaggacaagacagccgcaaagtaa 432
>gb|AY105537.1| Zea mays PCO097944 mRNA sequence Length = 694 Score = 305 bits (154), Expect = 8e-80 Identities = 278/318 (87%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 59 cacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaagct 118 |||||||| || || |||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 107 cacagctacgctacgaagtccaaccag-acccgagtcgtcaagaccccaggcgggaagct 165 Query: 119 cgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaagaa 178 |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 166 tgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccgtcaccgggaagaa 225 Query: 179 gatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaa 238 |||||||| || || ||| | |||||| |||| |||||||| || ||| || |||||| Sbjct: 226 aatccaggggatccctcacttgaggcctgctgagtacaaaaggtccaggttgcctaggag 285 Query: 239 ccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaag 298 ||||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||| || Sbjct: 286 ccgcaggactgtgaaccgtccttatggtggagtactctctggaattgctgttagggagag 345 Query: 299 gatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaataca 358 ||||| ||||| |||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 346 aatcattcgtgccttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaataca 405 Query: 359 gaagaccaaggacaagac 376 || |||||||||||||| Sbjct: 406 aaaaaccaaggacaagac 423
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 280 bits (141), Expect = 5e-72 Identities = 299/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| |||||||||||| ||| |||||||||| ||||| || ||||||||| Sbjct: 76 atggtgcagcggctgacctaccgg-aagc-ggcacagctacgccacgaaatccaaccag- 132 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 || || |||||||||||||| ||||| | ||| ||||||||||||||||||||| ||||| Sbjct: 133 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 192 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| || || ||||| || ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 193 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 252 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| ||||| || || || |||| ||||| |||||||| ||||||||||| || ||| Sbjct: 253 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 312 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 || || || ||||| |||||||| || || ||||||||||| ||||| ||||| |||||| Sbjct: 313 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 372 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaag 374 |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 373 cagaagattgtgaagaaggtgttgaagatccagaagaccaaggacaag 420
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full insert sequence Length = 666 Score = 280 bits (141), Expect = 5e-72 Identities = 299/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| |||||||||||| ||| |||||||||| ||||| || ||||||||| Sbjct: 76 atggtgcagcggctgacctaccgg-aagc-ggcacagctacgccacgaaatccaaccag- 132 Query: 87 acgcgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcg 146 || || |||||||||||||| ||||| | ||| ||||||||||||||||||||| ||||| Sbjct: 133 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 192 Query: 147 agcggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcct 206 ||||| || || ||||| || ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 193 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 252 Query: 207 actgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggt 266 |||| ||||| || || || |||| ||||| |||||||| ||||||||||| || ||| Sbjct: 253 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 312 Query: 267 ggagtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggag 326 || || || ||||| |||||||| || || ||||||||||| ||||| ||||| |||||| Sbjct: 313 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 372 Query: 327 cagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaag 374 |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 373 cagaagattgtgaagaaggtgttgaagatccagaagaccaaggacaag 420
>gb|AY105535.1| Zea mays PCO097943 mRNA sequence Length = 589 Score = 280 bits (141), Expect = 5e-72 Identities = 237/269 (88%) Strand = Plus / Plus Query: 108 ggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtg 167 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 269 ggtgggaagcttgtgtaccaatacaccaagaagagggcgagcggtcccaagtgccccgtc 328 Query: 168 accgggaagaagatccagggtattccccacctcaggcctactgaatacaaaagatcaagg 227 |||||||||||||||||||| || |||||| | || ||| | || ||||| || || ||| Sbjct: 329 accgggaagaagatccaggggatcccccacttgagacctgccgagtacaagaggtccagg 388 Query: 228 ctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgca 287 |||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 389 ttgtctaggaaccgcaggactgttaaccgtccttatggtggagtactctctggaattgct 448 Query: 288 gtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 347 || ||||| || || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 449 gttagggagagaattatccgtgctttcttggttgaggagcagaatattgtcaagaaggtc 508 Query: 348 ttgaaaatacagaagaccaaggacaagac 376 ||||||||||||| |||||||||||||| Sbjct: 509 ctgaaaatacagaaaaccaaggacaagac 537
>dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D12, full insert sequence Length = 562 Score = 238 bits (120), Expect = 2e-59 Identities = 150/160 (93%) Strand = Plus / Plus Query: 229 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 288 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 tgtctaggaaccgcagaactgtgaaccgtccctatggtggagtgctctctggaactgcag 224 Query: 289 tgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgt 348 | |||||||||||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct: 225 ttagggaaaggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtct 284 Query: 349 tgaaaatacagaagaccaaggacaagacgacctcaaagta 388 ||||||||||||| |||||||||||| | |||||||||| Sbjct: 285 tgaaaatacagaaaaccaaggacaagtcagcctcaaagta 324 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 429 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 488 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 361 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 420 Query: 489 atgttttag 497 ||||||||| Sbjct: 421 atgttttag 429 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/84 (86%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || ||| Sbjct: 84 atggtgcagcgcctgacgtaccgcaaa--aggcacagctatgccacgaagtctaatcag- 140 Query: 87 acgcgggtcgtcaagaccccaggt 110 ||||||||||||||||| |||||| Sbjct: 141 acgcgggtcgtcaagactccaggt 164
>gb|AY846826.1| Triticum aestivum ribosomal protein l34 mRNA, complete cds Length = 404 Score = 218 bits (110), Expect = 1e-53 Identities = 267/318 (83%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 59 cacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaagct 118 |||||||| ||||||||||| || ||| || || |||||||||||||||||||| ||||| Sbjct: 73 cacagctacgccaccaagtcgaatcag-actcgcgtcgtcaagaccccaggtgggaagct 131 Query: 119 cgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaagaa 178 || |||||||||||||||||| ||||||| || || || ||||| || ||||| ||||| Sbjct: 132 tgtctaccagtacaccaagaagcgggcgagtgggccaaaatgcccggttaccggcaagaa 191 Query: 179 gatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaa 238 |||||| || || || ||||| ||||||||||| ||||| || | || |||| ||||| Sbjct: 192 gatccaaggaatcccacacctgaggcctactgagtacaagaggcccagattgtcgaggaa 251 Query: 239 ccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaag 298 | | ||||||||||||||||| |||||||| || || ||||| ||||||| ||||| || Sbjct: 252 caggaggactgtgaaccgtccttatggtggtgttctgtctggtcctgcagtcagggagag 311 Query: 299 gatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaataca 358 |||||| | || || ||||| ||||||||||||||||||||||||||| | || || || Sbjct: 312 gatcattagggcgtttttggtggaggagcagaagattgtgaagaaggtgcttaagatcca 371 Query: 359 gaagaccaaggacaagac 376 |||||||||||| ||||| Sbjct: 372 gaagaccaaggagaagac 389
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 189 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 248 |||||||| ||||||||| |||| ||||| ||||| ||| |||||||||||||||| ||| Sbjct: 14637057 attccccatctcaggcctgctgagtacaagagatccaggttgtctaggaaccgcagaact 14636998 Query: 249 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 299 ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14636997 gtgaaccgtccctatggtggagtgctctctggaactgcagttagggaaagg 14636947 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 106 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 165 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 14638189 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccg 14638130 Query: 166 tgaccgggaagaagatccaggg 187 |||||||||||||||||||||| Sbjct: 14638129 tgaccgggaagaagatccaggg 14638108 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 |||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 14636865 aggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtcttgaaaata 14636806 Query: 357 cagaagaccaaggacaagacgacctcaaagta 388 ||||| |||||||||||| | |||||||||| Sbjct: 14636805 cagaaaaccaaggacaagtcagcctcaaagta 14636774 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 429 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 488 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 14636737 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 14636678 Query: 489 atgttttag 497 ||||||||| Sbjct: 14636677 atgttttag 14636669 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/84 (86%), Gaps = 3/84 (3%) Strand = Plus / Minus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || ||| Sbjct: 14638380 atggtgcagcgcctgacgtaccgcaaa--aggcacagctatgccacgaagtctaatcag- 14638324 Query: 87 acgcgggtcgtcaagaccccaggt 110 ||||||||||||||||| |||||| Sbjct: 14638323 acgcgggtcgtcaagactccaggt 14638300
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 189 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 248 |||||||| ||||||||| |||| ||||| ||||| ||| |||||||||||||||| ||| Sbjct: 58724 attccccatctcaggcctgctgagtacaagagatccaggttgtctaggaaccgcagaact 58665 Query: 249 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 299 ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 58664 gtgaaccgtccctatggtggagtgctctctggaactgcagttagggaaagg 58614 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 106 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 165 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 59856 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccg 59797 Query: 166 tgaccgggaagaagatccaggg 187 |||||||||||||||||||||| Sbjct: 59796 tgaccgggaagaagatccaggg 59775 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 |||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 58532 aggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtcttgaaaata 58473 Query: 357 cagaagaccaaggacaagacgacctcaaagta 388 ||||| |||||||||||| | |||||||||| Sbjct: 58472 cagaaaaccaaggacaagtcagcctcaaagta 58441 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 429 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 488 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 58404 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 58345 Query: 489 atgttttag 497 ||||||||| Sbjct: 58344 atgttttag 58336 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/84 (86%), Gaps = 3/84 (3%) Strand = Plus / Minus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || ||| Sbjct: 60047 atggtgcagcgcctgacgtaccgcaaa--aggcacagctatgccacgaagtctaatcag- 59991 Query: 87 acgcgggtcgtcaagaccccaggt 110 ||||||||||||||||| |||||| Sbjct: 59990 acgcgggtcgtcaagactccaggt 59967
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 189 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 248 ||||||||| | |||||| |||| ||||| || || ||| |||||||||||||||||||| Sbjct: 21214564 attccccacttgaggcctgctgagtacaagaggtccaggttgtctaggaaccgcaggact 21214505 Query: 249 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 299 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 21214504 gtgaaccgtccatatggtggagtgctctctggaactgcagttagggaaagg 21214454 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21214371 aggatcatccgtgctttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaata 21214312 Query: 357 cagaagaccaaggacaagac 376 ||||| |||||||||||||| Sbjct: 21214311 cagaaaaccaaggacaagac 21214292 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 3289222 aggatcatccgggcttttttggtcgaggagcagaagattgtgaagaaggtgttgaagatc 3289281 Query: 357 cagaagaccaaggacaag 374 |||||||||||||||||| Sbjct: 3289282 cagaagaccaaggacaag 3289299 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 106 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 165 ||||||| | ||| |||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 21215560 caggtgggaggcttgtgtaccagtacacgaagaagagggcgagcgggccgaagtgccccg 21215501 Query: 166 tgaccgggaagaagatccaggg 187 | |||||||||||||||||||| Sbjct: 21215500 tcaccgggaagaagatccaggg 21215479 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgt 166 |||||| | ||| ||||||||||||||||||||| |||||||||| || || ||||| || Sbjct: 3287218 aggtgggaggcttgtgtaccagtacaccaagaagcgggcgagcgggccgaaatgcccagt 3287277 Query: 167 gaccgggaagaagatcca 184 ||||||||||||||||| Sbjct: 3287278 caccgggaagaagatcca 3287295 Score = 60.0 bits (30), Expect = 8e-06 Identities = 74/85 (87%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| |||||||||||| ||| |||||||||| ||||| || ||||||||| Sbjct: 3286861 atggtgcagcggctgacctaccgg-aagc-ggcacagctacgccacgaaatccaaccag- 3286917 Query: 87 acgcgggtcgtcaagaccccaggtg 111 || || |||||||||||||| |||| Sbjct: 3286918 acccgcgtcgtcaagacccccggtg 3286942 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 229 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 288 |||| ||||| |||||||| ||||||||||| || ||||| || || ||||| ||||||| Sbjct: 3289081 tgtcaaggaatcgcaggaccgtgaaccgtccttacggtggtgtcctgtctggtactgcag 3289140 Query: 289 t 289 | Sbjct: 3289141 t 3289141 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 529 cagagattgtgaaacatttgat 550 |||||||||||||||||||||| Sbjct: 18477014 cagagattgtgaaacatttgat 18477035 Score = 42.1 bits (21), Expect = 1.9 Identities = 71/84 (84%), Gaps = 3/84 (3%) Strand = Plus / Minus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| || ||||||||| ||| | |||||||| || || ||||| |||||| Sbjct: 21215737 atggtgcagcggctcacctaccgg-aagc-gtcacagctacgcgactaagtcgaaccag- 21215681 Query: 87 acgcgggtcgtcaagaccccaggt 110 || |||||||||||||||||||| Sbjct: 21215680 accagggtcgtcaagaccccaggt 21215657
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 189 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 248 ||||||||| | |||||| |||| ||||| || || ||| |||||||||||||||||||| Sbjct: 40841 attccccacttgaggcctgctgagtacaagaggtccaggttgtctaggaaccgcaggact 40782 Query: 249 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 299 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 40781 gtgaaccgtccatatggtggagtgctctctggaactgcagttagggaaagg 40731 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 40648 aggatcatccgtgctttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaata 40589 Query: 357 cagaagaccaaggacaagac 376 ||||| |||||||||||||| Sbjct: 40588 cagaaaaccaaggacaagac 40569 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 106 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 165 ||||||| | ||| |||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 41837 caggtgggaggcttgtgtaccagtacacgaagaagagggcgagcgggccgaagtgccccg 41778 Query: 166 tgaccgggaagaagatccaggg 187 | |||||||||||||||||||| Sbjct: 41777 tcaccgggaagaagatccaggg 41756 Score = 42.1 bits (21), Expect = 1.9 Identities = 71/84 (84%), Gaps = 3/84 (3%) Strand = Plus / Minus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| || ||||||||| ||| | |||||||| || || ||||| |||||| Sbjct: 42014 atggtgcagcggctcacctaccgg-aagc-gtcacagctacgcgactaagtcgaaccag- 41958 Query: 87 acgcgggtcgtcaagaccccaggt 110 || |||||||||||||||||||| Sbjct: 41957 accagggtcgtcaagaccccaggt 41934
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 66789 aggatcatccgggcttttttggtcgaggagcagaagattgtgaagaaggtgttgaagatc 66848 Query: 357 cagaagaccaaggacaag 374 |||||||||||||||||| Sbjct: 66849 cagaagaccaaggacaag 66866 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgt 166 |||||| | ||| ||||||||||||||||||||| |||||||||| || || ||||| || Sbjct: 64785 aggtgggaggcttgtgtaccagtacaccaagaagcgggcgagcgggccgaaatgcccagt 64844 Query: 167 gaccgggaagaagatcca 184 ||||||||||||||||| Sbjct: 64845 caccgggaagaagatcca 64862 Score = 60.0 bits (30), Expect = 8e-06 Identities = 74/85 (87%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccaccaagtccaaccagn 86 ||||||||||| |||||||||||| ||| |||||||||| ||||| || ||||||||| Sbjct: 64428 atggtgcagcggctgacctaccgg-aagc-ggcacagctacgccacgaaatccaaccag- 64484 Query: 87 acgcgggtcgtcaagaccccaggtg 111 || || |||||||||||||| |||| Sbjct: 64485 acccgcgtcgtcaagacccccggtg 64509 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 229 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 288 |||| ||||| |||||||| ||||||||||| || ||||| || || ||||| ||||||| Sbjct: 66648 tgtcaaggaatcgcaggaccgtgaaccgtccttacggtggtgtcctgtctggtactgcag 66707 Query: 289 t 289 | Sbjct: 66708 t 66708
>gb|L27107.1|TOB6RPLA Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA, complete cds Length = 597 Score = 93.7 bits (47), Expect = 6e-16 Identities = 248/314 (78%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 57 ggcacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaag 116 ||||||||||||||||||| || ||||| | |||| ||||| ||||||||||| ||| Sbjct: 61 ggcacagctatgccaccaaatctaaccaacata-gggttgtcaaaaccccaggtggaaag 119 Query: 117 ctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaag 176 || | |||||| |||||||||||||| || || || ||||||||||| || || || Sbjct: 120 ctgatttaccagagtaccaagaagagggctagtggacctaagtgccctgttactggaaaa 179 Query: 177 aagatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagg 236 | || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || Sbjct: 180 agaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtcgaga 239 Query: 237 aaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaa 296 ||| | ||||||||||||||| | |||||||| ||| | || || | ||| || | ||| Sbjct: 240 aacaggaggactgtgaaccgtgcttatggtggtgtgttgtcaggcagtgctgtacgtgaa 299 Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 |||||||| | || || ||||| || || || ||||||||||||||||| ||||| || Sbjct: 300 aggatcataagagcctttttggtggaagaacaaaagattgtgaagaaggttttgaagatc 359 Query: 357 cagaagaccaagga 370 ||||| ||||||| Sbjct: 360 cagaaagccaagga 373
>gb|AY174764.1| Orobanche cumana 60S ribosomal protein L34 mRNA, partial cds Length = 548 Score = 85.7 bits (43), Expect = 1e-13 Identities = 211/267 (79%) Strand = Plus / Plus Query: 96 gtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggcccc 155 ||||| ||||| || || ||||| ||||||| | ||| ||||||||||| ||||| ||| Sbjct: 13 gtcaaaacccctggggggaagctggtgtaccggagcactaagaagagggctagcggaccc 72 Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 || || || || ||||| |||| ||||| || ||||| || | |||||| |||| ||| Sbjct: 73 aaatgtcccgtaaccggcaagagaatccaagggattcctcatttgaggcctgctgagtac 132 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 || ||||| | || | || |||||||||||||| | |||||| |||||||| || | Sbjct: 133 aagagatctcgattgcccagaaaccgcaggactgtaacccgtccttatggtggtgtatta 192 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 ||||||| ||| |||||||| ||||| || || ||||| || || || ||||| || ||| Sbjct: 193 tctggaattgctgtgagggagaggattattcgggcttttttagtggaagagcaaaaaatt 252 Query: 336 gtgaagaaggtgttgaaaatacagaag 362 ||||||||||| ||||| || |||||| Sbjct: 253 gtgaagaaggtattgaagattcagaag 279
>dbj|AK059401.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B04, full insert sequence Length = 303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 429 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 488 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 102 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 161 Query: 489 atgttttag 497 ||||||||| Sbjct: 162 atgttttag 170 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 324 gagcagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctca 383 |||||||||||||||||||| || |||||||||||||| |||||||||||| | ||||| Sbjct: 1 gagcagaagattgtgaagaaagtcttgaaaatacagaaaaccaaggacaagtcagcctca 60 Query: 384 aagta 388 ||||| Sbjct: 61 aagta 65
>emb|AJ718263.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-24-380, cultivar Bright Yellow 2 Length = 271 Score = 81.8 bits (41), Expect = 2e-12 Identities = 170/212 (80%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 57 ggcacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaag 116 ||||||||||||||||||| || ||||| | |||| ||||| ||||||||||| ||| Sbjct: 259 ggcacagctatgccaccaaatctaaccaacata-gggttgtcaaaaccccaggtggaaag 201 Query: 117 ctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaag 176 || | |||||| |||||||||||||| || || || ||||||||||| || || || Sbjct: 200 ctgatttaccagagtaccaagaagagggctagtggacctaagtgccctgttactggaaaa 141 Query: 177 aagatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagg 236 | || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || Sbjct: 140 agaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtcgaga 81 Query: 237 aaccgcaggactgtgaaccgtccctatggtgg 268 ||| | ||||||||||||||| | |||||||| Sbjct: 80 aacaggaggactgtgaaccgtgcttatggtgg 49
>gb|L27089.1|TOB6RPL Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34 mRNA, complete cds Length = 630 Score = 77.8 bits (39), Expect = 4e-11 Identities = 246/314 (78%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 57 ggcacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaag 116 ||||||||||||||||||| || ||||| | |||| ||||| ||||||||||| ||| Sbjct: 47 ggcacagctatgccaccaaatctaaccaacata-gggttgtcaaaaccccaggtggaaag 105 Query: 117 ctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaag 176 || | || ||| || ||||||||||| || || || ||||||||||| || || || Sbjct: 106 ctgatttatcagagtactaagaagagggctagtggacctaagtgccctgttactggaaaa 165 Query: 177 aagatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagg 236 | || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || Sbjct: 166 agaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtccaga 225 Query: 237 aaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaa 296 ||| | ||||||||||||||| | |||||||| ||| | || || | ||| || | ||| Sbjct: 226 aacaggaggactgtgaaccgtgcttatggtggcgtgttgtcaggcagtgccgtacgtgaa 285 Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 |||||||| | || || ||||| || || || ||||||||||||||||| ||||| || Sbjct: 286 aggatcataagagcctttttggtggaagaacaaaagattgtgaagaaggttttgaagatc 345 Query: 357 cagaagaccaagga 370 ||||| ||||||| Sbjct: 346 cagaaagccaagga 359
>gb|AY389653.1| Hyacinthus orientalis ribosomal protein L34 (RPL34) mRNA, complete cds Length = 608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 189/238 (79%), Gaps = 1/238 (0%) Strand = Plus / Plus Query: 133 ccaagaagagggcgagcggccccaagtgccctgtgaccgggaagaagatccagggtattc 192 ||||||||||||||| || || | ||||||||| || || |||| || || || |||| Sbjct: 132 ccaagaagagggcgaaagggccaaggtgccctgtcactggaaagagaattcaagggattc 191 Query: 193 cccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggactgtga 252 | || || || |||||||| ||||| || || ||| || | |||||| | ||||| |||| Sbjct: 192 ctcatcttagacctactgagtacaagaggtctaggttggcaaggaacaggaggacagtga 251 Query: 253 accgtccctatggtggagtgctctctggaactgcagtgagggaaaggatcatccgtgctt 312 | ||| | ||||||||||| |||||||| | || |||| ||| || |||||||| || | Sbjct: 252 atcgtgcatatggtggagttctctctggcagcgcggtgaaggagagaatcatccgggcct 311 Query: 313 tcttggttgaggagcagaagattgtgaagaaggtgttgaaaatacagaagaccaagga 370 |||||| || |||||||||||||||||||| || |||| || |||||| ||||||| Sbjct: 312 -cttggtagaagagcagaagattgtgaagaaagttctgaagattcagaaggccaagga 368
>gb|DQ160155.1| Taraxacum officinale TO121-23 (To121-23) mRNA, partial cds Length = 243 Score = 75.8 bits (38), Expect = 1e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 93 gtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggc 152 |||||||| ||||| ||||| ||||| || |||||| ||| |||||||| || || || Sbjct: 84 gtcgtcaaaacccctggtggaaagctggtctaccagaccactaagaagagagctagtgga 143 Query: 153 cccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaa 212 || || |||||||| ||||| |||| || ||||| ||||| ||| | ||||| |||||| Sbjct: 144 cctaaatgccctgttaccggcaagagaattcaggggattcctcacttgaggccaactgaa 203 Query: 213 tacaaaagatcaaggctgtctaggaaccgcaggactgt 250 |||||||| |||||| | || |||||| | |||||||| Sbjct: 204 tacaaaaggtcaaggttatcaaggaacagaaggactgt 241
>ref|NM_113811.3| Arabidopsis thaliana structural constituent of ribosome AT3G28900 mRNA, complete cds Length = 574 Score = 73.8 bits (37), Expect = 5e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 161 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 220 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 221 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 280 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 281 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 340 Query: 336 gtgaagaaggtgttgaa 352 ||||||||||| ||||| Sbjct: 341 gtgaagaaggttttgaa 357
>gb|BT013115.1| Lycopersicon esculentum clone 114402R, mRNA sequence Length = 663 Score = 73.8 bits (37), Expect = 5e-10 Identities = 211/269 (78%) Strand = Plus / Plus Query: 102 accccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgc 161 ||||||||||| ||||| | |||||| || ||||||||||| | || || |||||| Sbjct: 109 accccaggtggaaagctgatttaccagactacgaagaagagggctaatggacctaagtgc 168 Query: 162 cctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatacaaaaga 221 ||||| || || |||| || || || ||||| ||| | || ||| |||| ||||| ||| Sbjct: 169 cctgtaactggaaagagaattcaagggattccacacttgagacctgctgagtacaagaga 228 Query: 222 tcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctgga 281 || ||| | ||||||||| | ||||||||||||||| | |||||||| ||| | || || Sbjct: 229 tccaggttatctaggaacaggaggactgtgaaccgtgcttatggtggtgtgttgtccggc 288 Query: 282 actgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaag 341 | ||| || | |||||||||||| | || || |||||||| || || ||||| |||||| Sbjct: 289 agtgctgtacgtgaaaggatcatcagagcctttttggttgaagaacaaaagatcgtgaag 348 Query: 342 aaggtgttgaaaatacagaagaccaagga 370 ||||| ||||| || ||||| ||||||| Sbjct: 349 aaggttttgaagatccagaaagccaagga 377
>gb|AY091359.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 394 Score = 73.8 bits (37), Expect = 5e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 127 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 186 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 187 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 246 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 247 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 306 Query: 336 gtgaagaaggtgttgaa 352 ||||||||||| ||||| Sbjct: 307 gtgaagaaggttttgaa 323
>gb|AY045818.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 568 Score = 73.8 bits (37), Expect = 5e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 161 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 220 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 221 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 280 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 281 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 340 Query: 336 gtgaagaaggtgttgaa 352 ||||||||||| ||||| Sbjct: 341 gtgaagaaggttttgaa 357
>emb|BX825773.1|CNS0A6BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 73.8 bits (37), Expect = 5e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 134 aagtgccctgtaactggcaagagaatccaagggattccgcatttgagacctgctgagtac 193 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 194 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttctt 253 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 254 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 313 Query: 336 gtgaagaaggtgttgaa 352 ||||||||||| ||||| Sbjct: 314 gtgaagaaggttttgaa 330
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 201 aggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccc 260 |||||||| || ||||| |||||||||||| |||| ||||| ||||||||||||||| | Sbjct: 76357 aggcctacagagtacaagagatcaaggctgcctagaaaccgtaggactgtgaaccgtgct 76416 Query: 261 tatggtggagt 271 ||||| ||||| Sbjct: 76417 tatggcggagt 76427 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 gctttcttggttgaggagcagaagattgtgaagaaggt 346 |||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 76563 gctttcttggttgaagagcaaaagatcgtgaaaaaggt 76600
>gb|DQ407752.1| Gymnadenia conopsea ribosomal protein mRNA, complete cds Length = 773 Score = 69.9 bits (35), Expect = 9e-09 Identities = 99/119 (83%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 57 ggcacagctatgccaccaagtccaaccagnacgcgggtcgtcaagaccccaggtggcaag 116 |||| ||||||||||| ||||| |||||| || |||| || || ||||| || || | | Sbjct: 107 ggcatagctatgccacgaagtctaaccag-actagggttgtgaaaaccccgggcgggagg 165 Query: 117 ctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaa 175 || |||||||||||||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 166 cttgtgtaccagtacacgaataagagggcgagtgggccgaaatgccctgtgaccgggaa 224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 291 agggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttg 350 ||||||||||| ||||| || || |||| |||||||| |||||||| |||||||| || Sbjct: 340 agggaaaggattatccgggcctttctggtggaggagcaaaagattgttaagaaggttctg 399 Query: 351 aaaatacagaagaccaaggacaag 374 || || |||||| |||| |||||| Sbjct: 400 aagatccagaaggccaaagacaag 423
>ref|NM_105630.2| Arabidopsis thaliana RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome AT1G69620 (RPL34) mRNA, complete cds Length = 664 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>gb|AF349526.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 410 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 154 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 213 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 214 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 273 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 274 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 323
>gb|AF327531.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 598 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 215 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 274 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 275 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 334 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 335 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 384
>gb|AF446885.1|AF446885 Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 360 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 154 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 213 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 214 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 273 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 274 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 323
>gb|AY052720.1| Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 539 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>emb|BX816733.1|CNS0ABV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 886 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 945 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 946 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 995
>emb|BX814797.1|CNS0AC1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 202 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 261 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 262 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 321 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 322 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 371
>emb|BX818608.1|CNS0AAXR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 577 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 168 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 227 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 228 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 287 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 288 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 337
>gb|AF324703.1|AF324703 Arabidopsis thaliana T6C23.18 mRNA, complete cds Length = 599 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>gb|AY085544.1| Arabidopsis thaliana clone 1568 mRNA, complete sequence Length = 582 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 183 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 242 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>emb|BX814692.1|CNS0ADOU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 243 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 302 |||||||||||||| | || |||||||| | ||||| |||||||||||||||||||| Sbjct: 225 aggactgtgaaccgagcatacggtggagtcttgtctggttctgcagtgagggaaaggatc 284 Query: 303 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttga 351 || || || ||| | || || ||||| |||||||| ||||| ||||||| Sbjct: 285 attcgggcattccttgtcgaagagcaaaagattgtaaagaaagtgttga 333
>emb|BX825772.1|CNS0A6BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 65.9 bits (33), Expect = 1e-07 Identities = 156/197 (79%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 215 ||||||||||| || || ||||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 134 aagtgccctgttactggcaagaaaatccaagggattccgcatttgagtcctgctgagtac 193 Query: 216 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 275 ||||| |||||| || | |||||| ||||| || || ||| | |||||||| || || Sbjct: 194 aaaaggtcaaggttggcaaggaacgagaggacagtaaatcgtgcatatggtggtgttcta 253 Query: 276 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 335 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 254 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 313 Query: 336 gtgaagaaggtgttgaa 352 || |||||||| ||||| Sbjct: 314 gtaaagaaggttttgaa 330
>ref|XM_359481.1| Magnaporthe grisea 70-15 hypothetical protein (MG05296.4) partial mRNA Length = 351 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 347 |||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 272 tccgtgctttcttgatcgaggagcagaagattgtcaagaaggtg 315
>gb|AY849626.1| Magnaporthe grisea 60S ribosomal protein L34-B-like protein mRNA, complete cds Length = 683 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 347 |||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 332 tccgtgctttcttgatcgaggagcagaagattgtcaagaaggtg 375
>ref|NM_102452.3| Arabidopsis thaliana structural constituent of ribosome AT1G26880 mRNA, complete cds Length = 668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 283 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 342 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 302 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 361 Query: 343 aggtgttgaaa 353 | ||||||||| Sbjct: 362 aagtgttgaaa 372
>gb|AY117327.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 283 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 342 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 254 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 313 Query: 343 aggtgttgaaa 353 | ||||||||| Sbjct: 314 aagtgttgaaa 324
>gb|AY080712.1| Arabidopsis thaliana putative 60s ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 653 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 283 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 342 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 275 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 334 Query: 343 aggtgttgaaa 353 | ||||||||| Sbjct: 335 aagtgttgaaa 345
>emb|BX814361.1|CNS0AEHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 283 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 342 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 262 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 321 Query: 343 aggtgttgaaa 353 | ||||||||| Sbjct: 322 aagtgttgaaa 332
>gb|AY088495.1| Arabidopsis thaliana clone 7182 mRNA, complete sequence Length = 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 283 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 342 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 303 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 362 Query: 343 aggtgttgaaa 353 | ||||||||| Sbjct: 363 aagtgttgaaa 373
>gb|DQ066310.1| Ixodes scapularis isolate IS-6-12L-37 ribosomal protein L34 mRNA, complete cds Length = 360 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtg 338 ||||||||||| |||||| || |||||||||||||||||||| Sbjct: 262 aggatcatccgggctttcctgattgaggagcagaagattgtg 303
>gb|U10047.1|PSU10047 Pisum sativum ribosomal protein L34 homolog (RPL34) mRNA, complete cds Length = 494 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 291 agggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttg 350 ||||||||||| || ||||||||| | ||||| ||||| || ||||| ||||| || ||| Sbjct: 282 agggaaaggattattcgtgctttccttgttgaagagcaaaaaattgttaagaaagttttg 341 Query: 351 aaaatacagaagac 364 || ||||||||||| Sbjct: 342 aagatacagaagac 355 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 135 aagaagagggcgagcggccccaagtgccctgtgaccgggaagaagatccagggtattccc 194 |||||||||||||| || || ||||| ||||| || || |||| |||||| || ||||| Sbjct: 126 aagaagagggcgagtggacctaagtgtcctgttactggaaagaggatccaagggattcca 185 Query: 195 cacctcaggcctactgaatacaa 217 || | || |||||||||||||| Sbjct: 186 catttgagacctactgaatacaa 208
>dbj|AP000386.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MLD15 Length = 82430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 49230 ttcttggttgaagaacagaagattgtgaagaaggttttgaa 49190
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 312 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 36818 ttcttggtggaagagcagaagattgtgaagaaggttttgaa 36858
>gb|AF378548.1|AF378548 Ophiostoma novo-ulmi clone 10 ribosomal protein L34-like protein mRNA, complete cds Length = 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggt 346 |||||||||||||||||||||||||||| Sbjct: 289 ttgaggagcagaagattgtgaagaaggt 316
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete sequence Length = 121637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 237 aaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgaggga 295 ||||||||||||||||||||| | ||||| || ||||| ||||||| ||| || ||||| Sbjct: 64232 aaccgcaggactgtgaaccgtgcttatggaggtgtgctatctggaagtgctgtaaggga 64174
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||| | || || |||||||| || || ||||||||||||||||| ||||| || Sbjct: 95616 aggatcatcagagcctttttggttgaagaacaaaagattgtgaagaaggttttgaagatc 95557 Query: 357 cagaagaccaagga 370 ||||| ||||||| Sbjct: 95556 cagaaagccaagga 95543 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 aggactgtgaaccgtccctatggtgg 268 ||||||||||||||| |||||||||| Sbjct: 95758 aggactgtgaaccgtgcctatggtgg 95733
>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence Length = 81567 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||| | || || |||||||| || || ||||||||||||||||| ||||| || Sbjct: 48000 aggatcatcagagcctttttggttgaagaacaaaagattgtgaagaaggttttgaagatc 47941 Query: 357 cagaagaccaagga 370 ||||| ||||||| Sbjct: 47940 cagaaagccaagga 47927 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 aggactgtgaaccgtccctatggtgg 268 ||||||||||||||| |||||||||| Sbjct: 48142 aggactgtgaaccgtgcctatggtgg 48117
>ref|XM_384325.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04149.1) partial mRNA Length = 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 |||||||||||||||| || |||||||||||||| Sbjct: 269 ttgaggagcagaagatcgtcaagaaggtgttgaa 302
>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence Length = 123373 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 56 aggcacagctatgccaccaagtccaaccag 85 |||||||||||||||||||| ||||||||| Sbjct: 26507 aggcacagctatgccaccaaatccaaccag 26478
>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence Length = 136116 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 56 aggcacagctatgccaccaagtccaaccag 85 |||||||||||||||||||| ||||||||| Sbjct: 84428 aggcacagctatgccaccaaatccaaccag 84457
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 300 atcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||| ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 79910 atcattcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 79858
>gb|AC021046.2|AC021046 Arabidopsis thaliana chromosome 1 BAC F24J1 genomic sequence, complete sequence Length = 44430 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 300 atcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||| ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 9844 atcattcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 9792
>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence Length = 120384 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 213 tacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtg 272 ||||| ||||||||| | |||| |||||||| || |||||| || | ||||||||| | Sbjct: 90830 tacaagagatcaaggttacctagaaaccgcagcacagtgaactgtgcgtatggtggaatt 90889 Query: 273 ctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagca 328 | |||||| ||| || ||||||| |||||| | |||||||||||||| ||||| Sbjct: 90890 ttgtctggaggtgctgttagggaaatgatcattagggctttcttggttgaagagca 90945
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence Length = 130592 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 213 tacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtg 272 ||||| ||||||||| | |||| |||||||| || |||||| || | ||||||||| | Sbjct: 40283 tacaagagatcaaggttacctagaaaccgcagcacagtgaactgtgcgtatggtggaatt 40342 Query: 273 ctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagca 328 | |||||| ||| || ||||||| |||||| | |||||||||||||| ||||| Sbjct: 40343 ttgtctggaggtgctgttagggaaatgatcattagggctttcttggttgaagagca 40398
>gb|AY961475.1| Phytophthora infestans clone MY-23-A-10 ribosomal protein L34 mRNA, complete cds Length = 515 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 347 |||| |||||| || |||||||||||||||| || ||||||||| Sbjct: 311 tccgcgctttcctgattgaggagcagaagatcgttaagaaggtg 354 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 gtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaag 140 ||||||||||| ||||||||||| || |||||||| ||||||| Sbjct: 109 gtcaagacccctggtggcaagcttgtcgcccagtacatcaagaag 153
>ref|XM_958025.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||||| | |||||||||||||||| || |||||||| Sbjct: 272 tccgtgctttcctcattgaggagcagaagatcgtcaagaaggt 314
>ref|XM_328562.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||||| | |||||||||||||||| || |||||||| Sbjct: 272 tccgtgctttcctcattgaggagcagaagatcgtcaagaaggt 314
>ref|XM_744346.1| Aspergillus fumigatus Af293 ribosomal protein L34 protein (Afu2g03040) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||||| || ||||||||||||| || || |||||||| Sbjct: 497 tccgtgctttcctgattgaggagcagaaaatcgtcaagaaggt 539
>dbj|AB226191.1| Aspergillus oryzae cDNA, contig sequence: AoEST3050 Length = 605 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||||| || | |||||||||||||| || |||||||| Sbjct: 346 tccgtgctttcctgatcgaggagcagaagatcgtcaagaaggt 388
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 304 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||||| || | |||||||||||||| || |||||||| Sbjct: 1807847 tccgtgctttcctgatcgaggagcagaagatcgtcaagaaggt 1807889
>gb|AY168761.1| Branchiostoma belcheri tsingtaunese ribosomal protein L34 mRNA, complete cds Length = 466 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 gggaaaggatcatccgtgctttcttggttgaggagcagaagattgtg 338 |||||||||| | ||||||||| || ||||||| |||||||||||| Sbjct: 290 gggaaaggattgttcgtgctttcctgattgaggaacagaagattgtg 336
>dbj|AK062367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H12, full insert sequence Length = 472 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 ggtcgtcaagaccccaggtggcaagct 118 ||||||||||||||| ||||||||||| Sbjct: 119 ggtcgtcaagacccctggtggcaagct 145 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtg 347 |||||||||||||||| || ||||||||| Sbjct: 340 ttgaggagcagaagatcgtcaagaaggtg 368
>ref|XM_482187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 529 cagagattgtgaaacatttgat 550 |||||||||||||||||||||| Sbjct: 992 cagagattgtgaaacatttgat 971
>ref|NM_032975.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 2, mRNA Length = 6072 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 3965 ccccacctcaggcctactgaat 3986
>ref|NM_001390.3| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 1, mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 4059 ccccacctcaggcctactgaat 4080
>ref|NM_032980.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 6, mRNA Length = 5221 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 3114 ccccacctcaggcctactgaat 3135
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence Length = 121915 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 356 ||||||||| | || || |||||||| || || || |||||||||||||| ||||| || Sbjct: 102683 aggatcatcagagcctttttggttgaagaacaaaaaattgtgaagaaggttttgaagatc 102742 Query: 357 cagaagaccaagga 370 ||||| ||||||| Sbjct: 102743 cagaaagccaagga 102756
>ref|XM_420489.1| PREDICTED: Gallus gallus similar to ribosomal protein L34; 60S ribosomal protein L34 (LOC422526), mRNA Length = 899 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||||||||||| |||||||||||| Sbjct: 793 ttgaggagcagaagattgttgtgaaggtgttgaa 826
>ref|XM_657034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4522.2), mRNA Length = 351 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 306 cgtgctttcttggttgaggagcagaagattgtgaagaaggtg 347 ||||||||| || | |||||||||||||| || ||||||||| Sbjct: 274 cgtgctttcctgatcgaggagcagaagatcgtcaagaaggtg 315
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 ggaactgcagtgagggaaagga 300 |||||||||||||||||||||| Sbjct: 71833 ggaactgcagtgagggaaagga 71854
>ref|XM_792139.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9354-PA, isoform A (LOC592626), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagat 334 |||||| | |||||||||||| | |||||||||||||| Sbjct: 298 aggatcgtgcgtgctttcttgatcgaggagcagaagat 335
>gb|AC068506.10| Homo sapiens chromosome 18, clone RP11-96A15, complete sequence Length = 175885 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 50549 ccccacctcaggcctactgaat 50528
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 309 gctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||| | |||||||||||||| || |||||||| Sbjct: 548802 gctttcttgatcgaggagcagaagatcgtcaagaaggt 548765
>gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, complete sequence Length = 163998 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 gaaaatacagaagaccaaggac 371 |||||||||||||||||||||| Sbjct: 161288 gaaaatacagaagaccaaggac 161309
>emb|CR338843.2| Gallus gallus finished cDNA, clone ChEST69d4 Length = 1011 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||||||||||| |||||||||||| Sbjct: 905 ttgaggagcagaagattgttgtgaaggtgttgaa 938
>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence Length = 163976 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 gaaaatacagaagaccaaggac 371 |||||||||||||||||||||| Sbjct: 115974 gaaaatacagaagaccaaggac 115953
>emb|BX950575.1| Gallus gallus finished cDNA, clone ChEST566l24 Length = 665 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||||||||||| |||||||||||| Sbjct: 559 ttgaggagcagaagattgttgtgaaggtgttgaa 592
>emb|BX932642.1| Gallus gallus finished cDNA, clone ChEST494g15 Length = 903 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||||||||||| |||||||||||| Sbjct: 794 ttgaggagcagaagattgttgtgaaggtgttgaa 827
>emb|BX931507.1| Gallus gallus finished cDNA, clone ChEST391o10 Length = 866 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 319 ttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||||||||||| |||||||||||| Sbjct: 781 ttgaggagcagaagattgttgtgaaggtgttgaa 814
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 136638 ccccacctcaggcctactgaat 136617
>gb|AY909414.1| Siniperca chuatsi clone C46 60S ribosomal protein L34 mRNA, partial cds Length = 294 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagat 334 ||||||| ||||||||| || |||||||||||||||| Sbjct: 168 aggatcaagcgtgctttcctgattgaggagcagaagat 205
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 529 cagagattgtgaaacatttgat 550 |||||||||||||||||||||| Sbjct: 59037 cagagattgtgaaacatttgat 59058
>ref|NM_209371.1| Eremothecium gossypii ADL078Cp (ADL078C), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 gctttcttggttgaggagcagaagattgtgaagaaggt 346 ||||||||| | |||||||||||||| || |||||||| Sbjct: 274 gctttcttgatcgaggagcagaagatcgtcaagaaggt 311
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 324 gagcagaagattgtgaagaaggtgttgaaa 353 ||||| |||||||||||||| ||||||||| Sbjct: 23621 gagcaaaagattgtgaagaaagtgttgaaa 23592
>dbj|AB209102.1| Homo sapiens mRNA for dystrobrevin alpha isoform 2 variant protein Length = 6015 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 3933 ccccacctcaggcctactgaat 3954
>emb|AL833285.1|HSM804598 Homo sapiens mRNA; cDNA DKFZp451O128 (from clone DKFZp451O128) Length = 6066 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ccccacctcaggcctactgaat 213 |||||||||||||||||||||| Sbjct: 3959 ccccacctcaggcctactgaat 3980
>ref|XM_461331.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F24167g) partial mRNA Length = 369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ggtcgtcaagaccccaggtgg 112 ||||||||||||||||||||| Sbjct: 63 ggtcgtcaagaccccaggtgg 83
>emb|CR639118.2|CNS0ES44 Tetraodon nigroviridis full-length cDNA Length = 402 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgt 337 ||||||| ||| || ||| || ||||||||||||||||||| Sbjct: 279 aggatcaaccgcgcattcctgattgaggagcagaagattgt 319
>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains the SPACA1 gene for sperm acrosome associated 1, part of the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG island, complete sequence Length = 112212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 ggaactgcagtgagggaaagg 299 ||||||||||||||||||||| Sbjct: 68161 ggaactgcagtgagggaaagg 68141
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 gtaaacaaggaaaatattttt 448 ||||||||||||||||||||| Sbjct: 97472 gtaaacaaggaaaatattttt 97452
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ggtcgtcaagaccccaggtgg 112 ||||||||||||||||||||| Sbjct: 1919207 ggtcgtcaagaccccaggtgg 1919187
>emb|BX825288.1|CNS0A6GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 312 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||||| || ||||||| ||| |||||||| ||||| Sbjct: 307 ttcttggttgaagaacagaagactgttaagaaggttttgaa 347
>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence Length = 43657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 429 taaacaaggaaaatatttttgttgg 453 |||||||||||||||||||| |||| Sbjct: 39550 taaacaaggaaaatatttttcttgg 39526
>gb|AF401588.1| Ictalurus punctatus ribosomal protein L34 mRNA, complete cds Length = 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 297 aggatcatccgtgctttcttggttgaggagcagaagattgt 337 ||||||| ||||||||| | ||||||||||||||||||| Sbjct: 284 aggatcaagcgtgctttccttattgaggagcagaagattgt 324
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 cccacctcaggcctactgaat 213 ||||||||||||||||||||| Sbjct: 5141 cccacctcaggcctactgaat 5121
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 cccacctcaggcctactgaat 213 ||||||||||||||||||||| Sbjct: 102065 cccacctcaggcctactgaat 102085
>gb|AY023446.1| Oryza sativa microsatellite MRG5771 containing (TCC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.6 Identities = 40/46 (86%), Gaps = 2/46 (4%) Strand = Plus / Plus Query: 27 atggtgcagcgtctgacctaccggnaagnaggcacagctatgccac 72 ||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 180 atggtgcagcgcctgacgtaccgcaaa--aggcacagctatgccac 223
>gb|AC121137.18| Mus musculus chromosome 14, clone RP23-406K12, complete sequence Length = 164557 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 gtacttgaaatccttctgcc 518 |||||||||||||||||||| Sbjct: 92595 gtacttgaaatccttctgcc 92614
>ref|XM_381604.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01428.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gcaggactgtgaaccgtccc 260 |||||||||||||||||||| Sbjct: 74 gcaggactgtgaaccgtccc 55
>gb|AC012061.4| Homo sapiens BAC clone CTD-2052D1 from 7, complete sequence Length = 81670 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 taaacaaggaaaatattttt 448 |||||||||||||||||||| Sbjct: 43455 taaacaaggaaaatattttt 43436
>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 152898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 acaaggaaaatatttttgtt 451 |||||||||||||||||||| Sbjct: 143917 acaaggaaaatatttttgtt 143936
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccacctcaggcctactgaat 213 |||||||||||||||||||| Sbjct: 57943 ccacctcaggcctactgaat 57962
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gaaaatatttttgttggtgg 456 |||||||||||||||||||| Sbjct: 29427 gaaaatatttttgttggtgg 29408
>emb|AL391069.11| Human DNA sequence from clone RP11-126K1 on chromosome 1 Contains the 3' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4, two novel genes, gene KIAA1441 (FLJ13043), the PIK4CB genen for phosphatidylinositol 4-kinase catalytic beta polypeptide, the RFX5 gene for regulatory factor X 5 (influences HLA class II expression), the SELENBP1 gene for selenium binding protein 1 and two CpG islands, complete sequence Length = 121357 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gtgaagaaggtgttgaaaatacag 359 ||||||||| |||||||||||||| Sbjct: 84034 gtgaagaagctgttgaaaatacag 84057
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 gtacttgaaatccttctgcc 518 |||||||||||||||||||| Sbjct: 102571 gtacttgaaatccttctgcc 102590
>gb|AC091175.11| Homo sapiens chromosome 8, clone RP11-146E23, complete sequence Length = 84551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tgtaaacaaggaaaatattt 446 |||||||||||||||||||| Sbjct: 13845 tgtaaacaaggaaaatattt 13826
>gb|AC118480.3| Homo sapiens BAC clone RP11-393K13 from 4, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tgaagaaggtgttgaaaata 356 |||||||||||||||||||| Sbjct: 74524 tgaagaaggtgttgaaaata 74505
>gb|AC025479.8| Homo sapiens chromosome 8, clone RP11-358J8, complete sequence Length = 176647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tcaaagtaatctgtttgaaa 400 |||||||||||||||||||| Sbjct: 38754 tcaaagtaatctgtttgaaa 38735
>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence Length = 183972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 taaacaaggaaaatattttt 448 |||||||||||||||||||| Sbjct: 66432 taaacaaggaaaatattttt 66451
>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence Length = 184520 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gaaaatatttttgttggtgg 456 |||||||||||||||||||| Sbjct: 65437 gaaaatatttttgttggtgg 65418
>ref|XM_683014.1| PREDICTED: Danio rerio similar to superkiller viralicidic activity 2-like (LOC559653), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ttcttggttgaggagcagaa 331 |||||||||||||||||||| Sbjct: 54 ttcttggttgaggagcagaa 35
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tcaaagtaatctgtttgaaa 400 |||||||||||||||||||| Sbjct: 179309 tcaaagtaatctgtttgaaa 179290
>gb|AF287343.1|AF287343 Fuchsia hybrid cultivar Qiu 94208 ribosomal protein S10 mRNA, partial cds; nuclear gene for mitochondrial product Length = 407 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 aggagcagaagattgtgaagaagg 345 ||||||||||||| |||||||||| Sbjct: 209 aggagcagaagatggtgaagaagg 232
>gb|AC136977.4| Homo sapiens 12 BAC RP11-439H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33795 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 taaacaaggaaaatattttt 448 |||||||||||||||||||| Sbjct: 15886 taaacaaggaaaatattttt 15867
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 gtgaagaaggtgttgaaaatacag 359 ||||||||| |||||||||||||| Sbjct: 138462 gtgaagaagctgttgaaaatacag 138439
>dbj|AP005366.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB565H3, complete sequence Length = 101002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tcaaagtaatctgtttgaaa 400 |||||||||||||||||||| Sbjct: 54476 tcaaagtaatctgtttgaaa 54495
>gb|AF061604.1|AF061604 Pichia angusta ubiquitin-conjugating enzyme homolog peroxin 4 (PEX4) gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 309 gctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 352 ||||||||| |||| || || ||||| || |||||||||||||| Sbjct: 1165 gctttcttgattgaagaacaaaagatcgtcaagaaggtgttgaa 1122
>emb|BX510319.11| Zebrafish DNA sequence from clone CH211-221E5 in linkage group 8, complete sequence Length = 113234 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 aaacaaggaaaatatttttg 449 |||||||||||||||||||| Sbjct: 17505 aaacaaggaaaatatttttg 17524
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aagtgccctgtgaccgggaa 175 |||||||||||||||||||| Sbjct: 110546 aagtgccctgtgaccgggaa 110565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,445,325 Number of Sequences: 3902068 Number of extensions: 5445325 Number of successful extensions: 114793 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 114368 Number of HSP's gapped (non-prelim): 393 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
