Clone Information

BLAST Search Result

Clone Name	baal1g17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	256	8e-75
2	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	247	7e-71
3	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	243	1e-70
4	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	245	2e-70
5	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	244	3e-70
6	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	244	5e-70
7	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	237	3e-68
8	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	242	4e-67
9	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	228	4e-66
10	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	168	3e-42
11	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	164	1e-41
12	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	155	8e-38
13	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	135	7e-32
14	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	129	4e-30
15	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	129	4e-30
16	PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep...	121	1e-27
17	PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep...	116	5e-26
18	PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep...	113	3e-25
19	PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloropl...	34	1e-04
20	MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)	30	3.4
21	H1_EUPES (Q9M5W4) Histone H1	30	5.8
22	MYS_AEQIR (P24733) Myosin heavy chain, striated muscle	30	5.8
23	GCST_SYNEL (Q8DKV6) Aminomethyltransferase (EC 2.1.2.10) (Glycin...	29	9.9

>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  256 bits (654), Expect(2) = 8e-75
 Identities = 129/137 (94%), Positives = 129/137 (94%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPP FQKTKLM
Sbjct: 99  VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLM 158

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDEMEGPLEV    TLKFEEKDGIDYAAVTVQLPGGERV FLFTVKQLVATGKP
Sbjct: 159 TRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKP 218

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESF  PFLVPSYRGSSF
Sbjct: 219 ESFR-PFLVPSYRGSSF 234



 Score = 43.9 bits (102), Expect(2) = 8e-75
 Identities = 22/47 (46%), Positives = 23/47 (48%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KCADAA                    G P RLTFDEIQSKTYM  +G
Sbjct: 55  KCADAAKMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKG 101

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>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  247 bits (630), Expect(2) = 7e-71
 Identities = 119/137 (86%), Positives = 125/137 (91%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGGV SF FK GKY  KKFCLEPTSFTVKAE + KN PP FQKTKLM
Sbjct: 105 VKGTGTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLM 164

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP
Sbjct: 165 TRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 224

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFSG FLVPSYRGSSF
Sbjct: 225 ESFSGEFLVPSYRGSSF 241



 Score = 40.0 bits (92), Expect(2) = 7e-71
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGA+AEG PK
Sbjct: 69  AGFALATSALVVSGANAEGVPK 90



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           K  DAA                    G P RLTFDEIQSKTYM  +G
Sbjct: 61  KFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKG 107

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  243 bits (621), Expect(2) = 1e-70
 Identities = 117/137 (85%), Positives = 125/137 (91%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGGVDSF FK GKY  KK CLEPTSFTVK+EG+ KN P AFQ TKLM
Sbjct: 101 VKGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLM 160

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV ADG++KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP
Sbjct: 161 TRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 220

Query: 495 ESFSGPFLVPSYRGSSF 545
           +SFSG FLVPSYRGSSF
Sbjct: 221 DSFSGEFLVPSYRGSSF 237



 Score = 42.7 bits (99), Expect(2) = 1e-70
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGASAEGAPK
Sbjct: 65  AGFALATSALVVSGASAEGAPK 86



 Score = 37.0 bits (84), Expect = 0.036
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC +A+                    G P RLTFDEIQSKTY+  +G
Sbjct: 57  KCVEASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKG 103

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  245 bits (626), Expect(2) = 2e-70
 Identities = 119/137 (86%), Positives = 124/137 (90%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGGVDSF FK GKY  KKFCLEPTSFTVKAEG+ KN  P FQKTKLM
Sbjct: 105 VKGTGTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLM 164

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP
Sbjct: 165 TRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 224

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFS  FLVPSYRGSSF
Sbjct: 225 ESFSVDFLVPSYRGSSF 241



 Score = 40.0 bits (92), Expect(2) = 2e-70
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGA+AEG PK
Sbjct: 69  AGFALATSALVVSGANAEGVPK 90



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 21/47 (44%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC DAA                    G P RLTFDEIQSKTYM  +G
Sbjct: 61  KCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKG 107

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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  244 bits (623), Expect(2) = 3e-70
 Identities = 117/137 (85%), Positives = 125/137 (91%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKG+GTANQCPTI+GG +SF +K GKY +KK CLEPTSFTVKAEGI KN PP FQKTKLM
Sbjct: 102 VKGSGTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLM 161

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP
Sbjct: 162 TRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 221

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFSG +LVPSYRGSSF
Sbjct: 222 ESFSGSYLVPSYRGSSF 238



 Score = 40.8 bits (94), Expect(2) = 3e-70
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL++SGASAEG PK
Sbjct: 66  AGFALATSALVISGASAEGVPK 87



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 21/47 (44%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC DAA                    G P RLTFDEIQSKTYM  +G
Sbjct: 58  KCTDAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKG 104

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  244 bits (623), Expect(2) = 5e-70
 Identities = 118/137 (86%), Positives = 124/137 (90%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTI+GGV SF FK GKY  KKFCLEPTSFTVKAEG+ KN  P FQKTKLM
Sbjct: 102 VKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLM 161

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP
Sbjct: 162 TRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 221

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFSG FLVPSYRGSSF
Sbjct: 222 ESFSGEFLVPSYRGSSF 238



 Score = 40.0 bits (92), Expect(2) = 5e-70
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGA+AEG PK
Sbjct: 66  AGFALATSALVVSGANAEGVPK 87



 Score = 38.5 bits (88), Expect = 0.012
 Identities = 20/47 (42%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC DAA                    G P RLT+DEIQSKTYM  +G
Sbjct: 58  KCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKG 104

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  237 bits (604), Expect(2) = 3e-68
 Identities = 113/137 (82%), Positives = 124/137 (90%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGG ++F FKAGKY  KKFC EPTSFTVKA+ + KN PP FQ TKLM
Sbjct: 104 VKGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLM 163

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EVG+DG++KF+E+DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKP
Sbjct: 164 TRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKP 223

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFSG FLVPSYRGSSF
Sbjct: 224 ESFSGKFLVPSYRGSSF 240



 Score = 41.2 bits (95), Expect(2) = 3e-68
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGA AEGAPK
Sbjct: 68  AGFALATSALVVSGAGAEGAPK 89



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 20/47 (42%), Positives = 23/47 (48%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC+DAA                    G P RLT+DEIQSKTYM  +G
Sbjct: 60  KCSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKG 106

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  242 bits (617), Expect(2) = 4e-67
 Identities = 116/137 (84%), Positives = 123/137 (89%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPT++GGVDSF FK GKY  KKFCLEPT F VKAEGI KN  P FQ TKLM
Sbjct: 103 VKGTGTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLM 162

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP
Sbjct: 163 TRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 222

Query: 495 ESFSGPFLVPSYRGSSF 545
           ESFSG FLVPSYRGSSF
Sbjct: 223 ESFSGDFLVPSYRGSSF 239



 Score = 32.3 bits (72), Expect(2) = 4e-67
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AG ALATSAL+ SGA+AEG  +
Sbjct: 68  AGLALATSALIASGANAEGGKR 89



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC DA                     G   RLT+DEIQSKTY+  +G
Sbjct: 60  KCVDATKLAGLALATSALIASGANAEGGK-RLTYDEIQSKTYLEVKG 105

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  228 bits (582), Expect(2) = 4e-66
 Identities = 108/137 (78%), Positives = 121/137 (88%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLM 314
           VKGTGTANQCPTIDGG ++F FK GKY  KKFC EPTSFTVKA+ + KN PP FQ TKLM
Sbjct: 105 VKGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLM 164

Query: 315 TRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP 494
           TRLTYTLDE+EGP EV +DG++ F+E+DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKP
Sbjct: 165 TRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKP 224

Query: 495 ESFSGPFLVPSYRGSSF 545
           +SF+G FLVPSYRGSSF
Sbjct: 225 DSFTGKFLVPSYRGSSF 241



 Score = 42.7 bits (99), Expect(2) = 4e-66
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +1

Query: 25  AGFALATSALLVSGASAEGAPK 90
           AGFALATSAL+VSGASAEGAPK
Sbjct: 69  AGFALATSALVVSGASAEGAPK 90



 Score = 38.5 bits (88), Expect = 0.012
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   KCADAAXRXXXXXXXXXXXXXXXVRRGRPXRLTFDEIQSKTYMXGEG 142
           KC+DA                     G P RLT+DEIQSKTYM  +G
Sbjct: 61  KCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKG 107

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  168 bits (426), Expect(2) = 3e-42
 Identities = 83/138 (60%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = +3

Query: 135 VKGTGTANQCPTID-GGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKL 311
           VKGTG AN CP ++ G  D     AG Y+++ FC+EPTSFTVK E + K     F KTKL
Sbjct: 66  VKGTGIANTCPVLEKGSTDLSELSAGTYKLENFCIEPTSFTVKEESVFKGGETEFVKTKL 125

Query: 312 MTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGK 491
           MTRLTYTLD M G L+VG+DG+ + +E+DGIDYAA TVQLPGGERV FLFT+KQ    G 
Sbjct: 126 MTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGERVAFLFTIKQFDGKGT 185

Query: 492 PESFSGPFLVPSYRGSSF 545
            ++  G F+VPSYRGSSF
Sbjct: 186 LDNIKGDFVVPSYRGSSF 203



 Score = 22.7 bits (47), Expect(2) = 3e-42
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 80  GRPXRLTFDEIQSKTYMXGEG 142
           G    LT+DE+Q  TY+  +G
Sbjct: 48  GSANALTYDELQGLTYLQVKG 68

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  164 bits (416), Expect(2) = 1e-41
 Identities = 82/138 (59%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDSFP-FKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKL 311
           VKG+G AN CP ++ G  +    KAG Y+++ FC+EPTSFTVK E   K     F KTKL
Sbjct: 65  VKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKL 124

Query: 312 MTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGK 491
           MTRLTYTLD M G  +VG+DG+ + +E DGIDYAA TVQLPGGERV FLFT+KQ    G 
Sbjct: 125 MTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGT 184

Query: 492 PESFSGPFLVPSYRGSSF 545
            +   G FLVPSYRGSSF
Sbjct: 185 LDGIKGDFLVPSYRGSSF 202



 Score = 24.6 bits (52), Expect(2) = 1e-41
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 80  GRPXRLTFDEIQSKTYMXGEG 142
           G    LTFDEIQ  TY+  +G
Sbjct: 47  GSANALTFDEIQGLTYLQVKG 67

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  155 bits (393), Expect(2) = 8e-38
 Identities = 78/138 (56%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGVDS-FPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKL 311
           VK +G A  CP +  GV S    KAGKYE+  +CLEP+SF VK    +K +   F++TKL
Sbjct: 109 VKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKL 168

Query: 312 MTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGK 491
           MTRLTYTLD +   L VG DG+   +EKDG+DYAA TVQL GGERVPFLFT+K L+A G 
Sbjct: 169 MTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGD 228

Query: 492 PESFSGPFLVPSYRGSSF 545
              F G F VPSYRG++F
Sbjct: 229 AGQFLGQFDVPSYRGATF 246



 Score = 20.8 bits (42), Expect(2) = 8e-38
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 95  LTFDEIQSKTYM 130
           LT+DE+QS +Y+
Sbjct: 96  LTYDELQSLSYL 107

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  135 bits (340), Expect = 7e-32
 Identities = 74/160 (46%), Positives = 101/160 (63%), Gaps = 11/160 (6%)
 Frame = +3

Query: 99  PSTKSRARPTWX-VKGTGTANQCPTI-DGGVDSFPFKAGK-YEMKKFCLEPTSFTVKAEG 269
           P++ +R   T+  ++GTG AN+CP + +    S P  + K Y +K+ CLEPT+F VK E 
Sbjct: 25  PASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCLEPTNFFVKEEP 84

Query: 270 IQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERV 449
             K +   F   KL+TR T T+D++ G L+   D +L F EKDG+D+ A+TVQLPGGERV
Sbjct: 85  ANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERV 144

Query: 450 PFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSF 545
           PFLFT+K LVA  +P          F G F VPSYRG++F
Sbjct: 145 PFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAF 184

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  129 bits (325), Expect = 4e-30
 Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 10/147 (6%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGV-DSFPFKAGK-YEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTK 308
           + GTG AN+CPT+D     ++P  + + Y + + CL+PT+F VK E   K +   F  TK
Sbjct: 36  IVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTK 95

Query: 309 LMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATG 488
           L+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ GGER+P LFTVK LVA+ 
Sbjct: 96  LVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVAST 155

Query: 489 KPE--------SFSGPFLVPSYRGSSF 545
           +P          F G F VPSYR ++F
Sbjct: 156 QPNVTSITTSTDFKGEFNVPSYRTANF 182

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  129 bits (325), Expect = 4e-30
 Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 10/147 (6%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGV-DSFPFKAGK-YEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTK 308
           + GTG AN+CPT+D     ++P  + + Y + + CL+PT+F VK E   K +   F  TK
Sbjct: 36  IVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTK 95

Query: 309 LMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATG 488
           L+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ GGER+P LFTVK LVA+ 
Sbjct: 96  LVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVAST 155

Query: 489 KPE--------SFSGPFLVPSYRGSSF 545
           +P          F G F VPSYR ++F
Sbjct: 156 QPNVTSITTSTDFKGEFNVPSYRTANF 182

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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score =  121 bits (304), Expect = 1e-27
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
 Frame = +3

Query: 135 VKGTGTANQCPTID----GGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQK 302
           +  TG AN CP I     G ++  P    KY +  FC+EP  + VK E + K +   + K
Sbjct: 39  IVNTGLANVCPEISSFTRGTIEVEPNT--KYFVSDFCMEPQEYFVKEEPVNKRQKAEYVK 96

Query: 303 TKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVA 482
            K++TR T +L+++ G + VGADGTL F+EKDGID+  +TV LPGGE VPF FTVK    
Sbjct: 97  GKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTG 156

Query: 483 TGKP--------ESFSGPFLVPSYRGSSF 545
           T +P          F G F VPSYRG+ F
Sbjct: 157 TTEPGFTSINSSTDFVGDFNVPSYRGAGF 185

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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score =  116 bits (290), Expect = 5e-26
 Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 10/147 (6%)
 Frame = +3

Query: 135 VKGTGTANQCPTI-DGGVDSFPFKAGK-YEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTK 308
           +K TG AN+C ++ +    + P +AGK Y +   CLEP  F VK E   K +   F   K
Sbjct: 38  IKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGK 97

Query: 309 LMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVA-T 485
           ++TR T +LD++ G L + ADGT+ F EK GID+ A+TV LPGGE VPFLFTVK LVA T
Sbjct: 98  VLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVKGLVAST 157

Query: 486 GKPES-------FSGPFLVPSYRGSSF 545
            +P +         G + VPSYR S+F
Sbjct: 158 SEPATSINTSTDLRGGYRVPSYRTSNF 184

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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  113 bits (283), Expect = 3e-25
 Identities = 62/147 (42%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
 Frame = +3

Query: 135 VKGTGTANQCPTIDGGV-DSFPFKAGK-YEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTK 308
           +  TG AN+CP I      S P + G+ Y +   CLEP  + VK E + K +   +   K
Sbjct: 39  ILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGK 98

Query: 309 LMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATG 488
           L+TR T +L+++ G + V  DG + F E+ GID+  VTVQLPGGE+VPF FT+K LV   
Sbjct: 99  LLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKNLVGKT 158

Query: 489 KPE--------SFSGPFLVPSYRGSSF 545
           +P          F G F VPSYRG++F
Sbjct: 159 EPGFSSINSSIDFEGDFRVPSYRGATF 185

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>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)|
           (Fragment)
          Length = 31

 Score = 34.3 bits (77), Expect(2) = 1e-04
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2

Query: 80  GRPXRLTFDEIQSKTYMXGEG 142
           G P RLT+DEIQSKTYM  +G
Sbjct: 2   GAPKRLTYDEIQSKTYMEVKG 22



 Score = 30.4 bits (67), Expect(2) = 1e-04
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3

Query: 135 VKGTGTANQCPT 170
           VKGTGTANQCPT
Sbjct: 20  VKGTGTANQCPT 31

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>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 252 TVKAEGIQKNEPPAFQKTKLMTRLTYTLD 338
           TVK + +Q+  PP F+KT+ M+ LT+  D
Sbjct: 66  TVKKDVVQEMNPPKFEKTEDMSNLTFLND 94

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 426 QLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 539
           QLP   R   LF +K+LVA+GK       F +PS R +
Sbjct: 86  QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123

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>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle|
          Length = 1938

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 225 KFCLEPTSFTVKAEGIQKNEPPAFQKTKLMTRLTY 329
           K   + ++ TVK + IQ   PP F+K + M  +TY
Sbjct: 59  KIVADSSTRTVKKDDIQSMNPPKFEKLEDMANMTY 93

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>GCST_SYNEL (Q8DKV6) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage|
           system T protein)
          Length = 366

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 333 LDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 440
           +DE   PLE G DG + +++ D +  AA+  Q   G
Sbjct: 242 MDEQTTPLEAGLDGLIDWQKPDFVGRAALLAQKQQG 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,815,807
Number of Sequences: 219361
Number of extensions: 911762
Number of successful extensions: 3302
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3290
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result