>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0004B05, complete sequence
          Length = 121223

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 1     gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
             |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 20612 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 20563

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 1      gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
              |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 783058 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 783009

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 1      gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
              |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 742319 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 742270

>dbj|AK102691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103D10, full
            insert sequence
          Length = 2549

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                               
Query: 1    gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
            |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 2031 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 2080

>dbj|AK066617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B02, full
            insert sequence
          Length = 2553

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                               
Query: 1    gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
            |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 2092 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 2141

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 1      gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
              |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 742321 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 742272

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 1      gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
              |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 783058 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 783009

>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23
            of library OSJNBb from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 12281

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 1    gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
            |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 4830 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 4781

>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa
           from chromosome 11 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                              
Query: 1   gtacatggnattcagngntccgcgccatcatggcgcagtacatgcccctgg 51
           |||||||| |||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 653 gtacatgg-attcagagatccgcgccatcatggcccagtacatgcccctgg 702

>gb|AY110802.1| Zea mays CL50258_1 mRNA sequence
          Length = 661

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 19  tccgcgccatcatggcgcagtacatgcccctgg 51
           |||| ||||||||||| ||||||||||||||||
Sbjct: 302 tccgtgccatcatggctcagtacatgcccctgg 270

>gb|AY104972.1| Zea mays PCO068557 mRNA sequence
          Length = 1725

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 19   tccgcgccatcatggcgcagtacatgcccctgg 51
            |||||||||||||||| ||||||||||| ||||
Sbjct: 1483 tccgcgccatcatggcccagtacatgcctctgg 1515

>gb|BT017302.1| Zea mays clone EL01N0316C05.c mRNA sequence
          Length = 622

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 19  tccgcgccatcatggcgcagtacatgcc 46
           |||||||||||||||| |||||||||||
Sbjct: 219 tccgcgccatcatggcccagtacatgcc 246

>gb|AF161719.1|AF161719 Triticum aestivum vacuolar targeting receptor bp-80 mRNA, complete
            cds
          Length = 2293

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 19   tccgcgccatcatggcgcagtacatgcc 46
            |||||||||||||||| |||||||||||
Sbjct: 1847 tccgcgccatcatggctcagtacatgcc 1874

>gb|AY105262.1| Zea mays PCO087823 mRNA sequence
          Length = 1974

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 10   attcagngntccgcgccatcatggcgcagtacatgcccctgg 51
            |||||| | |||| ||||||||||| ||||||||||| ||||
Sbjct: 1457 attcagagatccgtgccatcatggctcagtacatgcctctgg 1498

>gb|U79961.1|ZMU79961 Zea mays vacuolar sorting receptor homolog mRNA, partial cds
          Length = 822

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 10  attcagngntccgcgccatcatggcgcagtacatgcccctgg 51
           |||||| | |||| ||||||||||| ||||||||||| ||||
Sbjct: 365 attcagagatccgtgccatcatggctcagtacatgcctctgg 406

>ref|XM_479541.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 27   atcatggcgcagtacatgcccctgg 51
            |||||||| ||||||||||||||||
Sbjct: 2000 atcatggctcagtacatgcccctgg 2024

>emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 198340

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 327   agtccaaagttcaaaatcatt 347
             |||||||||||||||||||||
Sbjct: 15533 agtccaaagttcaaaatcatt 15553

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 27       atcatggcgcagtacatgcccctgg 51
                |||||||| ||||||||||||||||
Sbjct: 28756408 atcatggctcagtacatgcccctgg 28756384

>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1205_F02
          Length = 112862

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 27    atcatggcgcagtacatgcccctgg 51
             |||||||| ||||||||||||||||
Sbjct: 63969 atcatggctcagtacatgcccctgg 63945

>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 27    atcatggcgcagtacatgcccctgg 51
             |||||||| ||||||||||||||||
Sbjct: 14094 atcatggctcagtacatgcccctgg 14070

>dbj|AK072667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F15, full
            insert sequence
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 27   atcatggcgcagtacatgcccctgg 51
            |||||||| ||||||||||||||||
Sbjct: 2000 atcatggctcagtacatgcccctgg 2024

>gb|AC123624.13| Mus musculus chromosome 16, clone RP23-133E12, complete sequence
          Length = 214202

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   accgttctgtaaatttctagatta 214
             ||||||||| ||||||||||||||
Sbjct: 27411 accgttctgaaaatttctagatta 27434

>gb|AC117647.12| Mus musculus chromosome 16, clone RP23-244M7, complete sequence
          Length = 186115

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   accgttctgtaaatttctagatta 214
             ||||||||| ||||||||||||||
Sbjct: 45136 accgttctgaaaatttctagatta 45113

>ref|XM_580994.2| PREDICTED: Bos taurus similar to nexilin (LOC504819), mRNA
          Length = 2745

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  agatgtgaagagcaacgccg 113
           ||||||||||||||||||||
Sbjct: 439 agatgtgaagagcaacgccg 458

>emb|AJ012166.1|CFA012166 Canis familiaris TCTA gene, AMT gene, NICN1 gene, DAG1 gene and BSN
            gene (partial)
          Length = 162073

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  agagatgtttgtgccaggacatag 292
            ||||||||||||||||| ||||||
Sbjct: 5528 agagatgtttgtgccagaacatag 5505

>gb|AC142230.3| Homo sapiens fosmid clone XXFOS-87252A6 from 7, complete sequence
          Length = 26013

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tattaatcacccaaaagtgc 232
             ||||||||||||||||||||
Sbjct: 21581 tattaatcacccaaaagtgc 21562

>gb|AC182113.1| Pan troglodytes BAC clone CH251-533C21 from chromosome unknown, complete
              sequence
          Length = 221601

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    attattaatcacccaaaagt 230
              ||||||||||||||||||||
Sbjct: 202548 attattaatcacccaaaagt 202529

>gb|AC133522.3| Homo sapiens BAC clone RP11-1277J4 from 2, complete sequence
          Length = 80803

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   acagtccaaagttcaaaatcatta 348
             |||||||||||| |||||||||||
Sbjct: 45321 acagtccaaagtccaaaatcatta 45298

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      tccgcgccatcatggcgcag 38
               ||||||||||||||||||||
Sbjct: 5191581 tccgcgccatcatggcgcag 5191600

>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218,
             complete sequence
          Length = 113213

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    gccatcatggcgcagtacatgccc 47
             ||||||||||| ||||||||||||
Sbjct: 50857 gccatcatggcacagtacatgccc 50880


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,516,053
Number of Sequences: 3902068
Number of extensions: 2516053
Number of successful extensions: 42762
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42671
Number of HSP's gapped (non-prelim): 91
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)