>NISP_LACLA (Q07596) Nisin leader peptide-processing serine protease nisP|
           precursor (EC 3.4.21.-)
          Length = 682

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 44  VLAIMFICCSLPCSAAIHGQTEGKQQ 121
           +L  +FI CSL  SA +HG+T   QQ
Sbjct: 4   ILGFLFIVCSLGLSATVHGETTNSQQ 29

>YDJ4_SCHPO (P87052) Hypothetical protein C57A10.04 in chromosome I|
          Length = 338

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = -2

Query: 332 SILERIKSTNTNWSAP*KRTLGVLMMRISYINQRRRSVG-----KRLLQGLAVDAASLIS 168
           SIL+ I ST  N+S   K+TL  ++M I   +  R ++G     K L Q        +IS
Sbjct: 45  SILQEIISTEYNYSVDLKKTLNEIIMPIEGQSMEREAIGICTCFKTLNQLHTKLYQQMIS 104

Query: 167 SGIPV 153
           SG PV
Sbjct: 105 SGSPV 109

>ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 418

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +1

Query: 256 IISTPNVLFYGALQLVLVLFIRSKILVVVTRQ-KYLSWYHGKY 381
           ++ + +V FY  L L+++LF+ +++ VV TRQ + L W  G++
Sbjct: 205 VLLSSSVSFY--LPLLVMLFVYARVFVVATRQLRLLRWELGRF 245

>DYH5_HUMAN (Q8TE73) Ciliary dynein heavy chain 5 (Axonemal beta dynein heavy|
            chain 5) (HL1)
          Length = 4624

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 112  KTTGXRGLLHAAGRTGIPLLIRDAASTARPCSSLFPTERRLWFMYEIRIISTPNVLFY 285
            K  G  G+ H   + G    +RD+ +       L P  RRLW M +I+++ TP    Y
Sbjct: 2739 KIFGVIGVGHYCTQRGFSEEVRDSVT------KLVPLTRRLWQMTKIKMLPTPAKFHY 2790

>MATK_HYDMC (Q8WKM6) Maturase K (Intron maturase)|
          Length = 506

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 426 SKGLSLQASYYYTVLAVC-ECHSYISSRALSVYVKQL 533
           SKG SL  + +   L  C +CH Y+ S+  S+Y+ QL
Sbjct: 286 SKGTSLLMNKWKYYLVNCWQCHFYVWSQPRSIYINQL 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,288,671
Number of Sequences: 219361
Number of extensions: 1414489
Number of successful extensions: 3797
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3796
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)