ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1f04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105872.1| Zea mays PCO079046 mRNA sequence Length = 1346 Score = 285 bits (144), Expect = 9e-74 Identities = 228/256 (89%) Strand = Plus / Plus Query: 209 ggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggt 268 |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 647 ggctggatctgcgtcggcttctccgtcagtgtcttcgtcgcgccactaagcatcatgagg 706 Query: 269 cgtgtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcacc 328 || |||||| |||| ||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 707 cgcgtgatccagacgaagagcgtagagtacatgcccttctccctctccctctcgctcacc 766 Query: 329 ctcagcgccatcgtctggttcctctacggcctgctcatcaaggacaaatacgtcgcgctc 388 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 767 ctcagcgccgtcgtctggttcctctacggcctcctcatcaaggacaaatacgtcgcgctt 826 Query: 389 ccaaacatccttggcttcaccttcgggatgatccagatggtcctctacatgttctacatg 448 |||||| |||| || |||| |||||| || |||||||||| |||||| ||||||||||| Sbjct: 827 ccaaacgtcctggggttcatcttcggcgtggtccagatggtgctctacgtgttctacatg 886 Query: 449 aacgcgacgccggtgg 464 ||| ||||||||||| Sbjct: 887 aacaagacgccggtgg 902 Score = 79.8 bits (40), Expect = 1e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| |||||||||||||||||| ||| ||||| || |||||||| |||||| Sbjct: 463 caccatcaacgccgccggctgcgtcatcgag-accatctacgtcgtcatgtacttcgtct 521 Query: 83 acgcccccaggnaaggccaagattttcacagccaagatc 121 |||| |||| | || |||||| | ||||| ||||||||| Sbjct: 522 acgcgcccaagaaa-gccaagctgttcacggccaagatc 559
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 174 bits (88), Expect = 2e-40 Identities = 94/96 (97%) Strand = Plus / Minus Query: 290 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 349 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17344098 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 17344039 Query: 350 ctctacggcctgctcatcaaggacaaatacgtcgcg 385 ||||||||||| |||||||||||||||||||||||| Sbjct: 17344038 ctctacggccttctcatcaaggacaaatacgtcgcg 17344003 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 194 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 253 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17344323 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17344264 Query: 254 ctcagcatcatcg 266 ||||||||||||| Sbjct: 17344263 ctcagcatcatcg 17344251 Score = 81.8 bits (41), Expect = 2e-12 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||| || Sbjct: 17344733 caccatcaacgccgccggttgcgtcatcgag-accatctacatcgtcatgtacctcgcct 17344675 Query: 83 acgccccca 91 ||||||||| Sbjct: 17344674 acgccccca 17344666 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 392 aacatccttggcttcaccttcgggatgatccagatggtcctctacatgttctacatgaac 451 |||||||| |||||||| ||||| || ||||||||| |||||| |||||||||||||| Sbjct: 17343881 aacatcctgggcttcacattcggtgtggtccagatggggctctacgtgttctacatgaac 17343822 Query: 452 gcgacgccggtgg 464 ||||||||||||| Sbjct: 17343821 gcgacgccggtgg 17343809 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 cccttctccctctccctcacgctc 325 |||||||||||||||||| ||||| Sbjct: 963610 cccttctccctctccctctcgctc 963633
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 174 bits (88), Expect = 2e-40 Identities = 94/96 (97%) Strand = Plus / Minus Query: 290 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 349 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17298469 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 17298410 Query: 350 ctctacggcctgctcatcaaggacaaatacgtcgcg 385 ||||||||||| |||||||||||||||||||||||| Sbjct: 17298409 ctctacggccttctcatcaaggacaaatacgtcgcg 17298374 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 194 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 253 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17298694 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17298635 Query: 254 ctcagcatcatcg 266 ||||||||||||| Sbjct: 17298634 ctcagcatcatcg 17298622 Score = 81.8 bits (41), Expect = 2e-12 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||| || Sbjct: 17299104 caccatcaacgccgccggttgcgtcatcgag-accatctacatcgtcatgtacctcgcct 17299046 Query: 83 acgccccca 91 ||||||||| Sbjct: 17299045 acgccccca 17299037 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 392 aacatccttggcttcaccttcgggatgatccagatggtcctctacatgttctacatgaac 451 |||||||| |||||||| ||||| || ||||||||| |||||| |||||||||||||| Sbjct: 17298252 aacatcctgggcttcacattcggtgtggtccagatggggctctacgtgttctacatgaac 17298193 Query: 452 gcgacgccggtgg 464 ||||||||||||| Sbjct: 17298192 gcgacgccggtgg 17298180 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 cccttctccctctccctcacgctc 325 |||||||||||||||||| ||||| Sbjct: 963610 cccttctccctctccctctcgctc 963633
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154826 Score = 174 bits (88), Expect = 2e-40 Identities = 94/96 (97%) Strand = Plus / Plus Query: 290 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 349 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 59271 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 59330 Query: 350 ctctacggcctgctcatcaaggacaaatacgtcgcg 385 ||||||||||| |||||||||||||||||||||||| Sbjct: 59331 ctctacggccttctcatcaaggacaaatacgtcgcg 59366 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 194 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 253 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 59046 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 59105 Query: 254 ctcagcatcatcg 266 ||||||||||||| Sbjct: 59106 ctcagcatcatcg 59118 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 392 aacatccttggcttcaccttcgggatgatccagatggtcctctacatgttctacatgaac 451 |||||||| |||||||| ||||| || ||||||||| |||||| |||||||||||||| Sbjct: 59488 aacatcctgggcttcacattcggtgtggtccagatggggctctacgtgttctacatgaac 59547 Query: 452 gcgacgccggtgg 464 ||||||||||||| Sbjct: 59548 gcgacgccggtgg 59560 Score = 81.8 bits (41), Expect = 2e-12 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||| || Sbjct: 58636 caccatcaacgccgccggttgcgtcatcgag-accatctacatcgtcatgtacctcgcct 58694 Query: 83 acgccccca 91 ||||||||| Sbjct: 58695 acgccccca 58703
>gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence Length = 1159 Score = 161 bits (81), Expect = 3e-36 Identities = 114/125 (91%) Strand = Plus / Plus Query: 290 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 349 ||||||| ||||||||||||||||||| || |||||||| ||||||| ||||||||||| Sbjct: 363 gtggagttcatgcccttctccctctccttctcgctcaccgccagcgccgtcgtctggttc 422 Query: 350 ctctacggcctgctcatcaaggacaaatacgtcgcgctcccaaacatccttggcttcacc 409 ||||||||||||||||||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 423 ctctacggcctgctcatcaaggacaaatacgtcgccctgccaaacgtgctcggcttcacc 482 Query: 410 ttcgg 414 ||||| Sbjct: 483 ttcgg 487 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 206 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 265 ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 279 ctcggctgggtctgcgtcgccttctccgtcagcgtcttcgtcgcgccgctcagcatcatc 338 Score = 48.1 bits (24), Expect = 0.035 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatc 66 |||||||||| | |||||||||||||||||| ||| |||||||| Sbjct: 103 caccatcaactccgccggctgcgtcatcgag-accctctacatc 145
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 137 bits (69), Expect = 5e-29 Identities = 177/213 (83%) Strand = Plus / Plus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcgtgtga 275 ||||||| ||||||||||| ||||||||||||| || || ||||||||| | | ||| Sbjct: 642 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcaggctggtgg 701 Query: 276 tcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcg 335 | |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||| Sbjct: 702 tgcgcaccaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcg 761 Query: 336 ccatcgtctggttcctctacggcctgctcatcaaggacaaatacgtcgcgctcccaaaca 395 || |||||||||||||||||||||| ||||||||||||||||| ||||| || || ||| Sbjct: 762 ccgtcgtctggttcctctacggcctcctcatcaaggacaaatatgtcgctcttcccaacg 821 Query: 396 tccttggcttcaccttcgggatgatccagatgg 428 | || |||||| ||||||| | |||||||||| Sbjct: 822 tgctgggcttctccttcggcgtcatccagatgg 854 Score = 99.6 bits (50), Expect = 1e-17 Identities = 127/150 (84%), Gaps = 2/150 (1%) Strand = Plus / Plus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||| | || ||||||||||||||| ||| |||||||| | | |||||||||| Sbjct: 451 caccatcaactccgctggctgcgtcatcgag-accatctacatcgccgtctacctcgtct 509 Query: 83 acgcccccaggnaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgcc 142 ||||||||| | ||||||||||| ||||| |||||| || |||||||| ||||| ||| | Sbjct: 510 acgcccccaag-aaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggc 568 Query: 143 ggcttcgggctcattttcgtcctcaccctc 172 | |||||| ||||| || ||||||||||| Sbjct: 569 gtcttcggcctcatcctcctcctcaccctc 598
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 281 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 340 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 82078 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 82019 Query: 341 gtctggttcctctacggcctgctcatcaaggacaaatacgtcgc 384 |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 82018 gtctggttcctctacggcctcctcatcaaggacaaatatgtcgc 81975 Score = 99.6 bits (50), Expect = 1e-17 Identities = 127/150 (84%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||| | || ||||||||||||||| ||| |||||||| | | |||||||||| Sbjct: 82433 caccatcaactccgctggctgcgtcatcgag-accatctacatcgccgtctacctcgtct 82375 Query: 83 acgcccccaggnaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgcc 142 ||||||||| | ||||||||||| ||||| |||||| || |||||||| ||||| ||| | Sbjct: 82374 acgcccccaag-aaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggc 82316 Query: 143 ggcttcgggctcattttcgtcctcaccctc 172 | |||||| ||||| || ||||||||||| Sbjct: 82315 gtcttcggcctcatcctcctcctcaccctc 82286 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 266 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 82242 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 82192
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 281 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 340 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 17574267 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 17574208 Query: 341 gtctggttcctctacggcctgctcatcaaggacaaatacgtcgc 384 |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 17574207 gtctggttcctctacggcctcctcatcaaggacaaatatgtcgc 17574164 Score = 99.6 bits (50), Expect = 1e-17 Identities = 127/150 (84%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||| | || ||||||||||||||| ||| |||||||| | | |||||||||| Sbjct: 17574622 caccatcaactccgctggctgcgtcatcgag-accatctacatcgccgtctacctcgtct 17574564 Query: 83 acgcccccaggnaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgcc 142 ||||||||| | ||||||||||| ||||| |||||| || |||||||| ||||| ||| | Sbjct: 17574563 acgcccccaag-aaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggc 17574505 Query: 143 ggcttcgggctcattttcgtcctcaccctc 172 | |||||| ||||| || ||||||||||| Sbjct: 17574504 gtcttcggcctcatcctcctcctcaccctc 17574475 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 266 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17574431 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17574381
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 281 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 340 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 17668091 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 17668032 Query: 341 gtctggttcctctacggcctgctcatcaaggacaaatacgtcgc 384 |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 17668031 gtctggttcctctacggcctcctcatcaaggacaaatatgtcgc 17667988 Score = 99.6 bits (50), Expect = 1e-17 Identities = 127/150 (84%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||| | || ||||||||||||||| ||| |||||||| | | |||||||||| Sbjct: 17668446 caccatcaactccgctggctgcgtcatcgag-accatctacatcgccgtctacctcgtct 17668388 Query: 83 acgcccccaggnaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgcc 142 ||||||||| | ||||||||||| ||||| |||||| || |||||||| ||||| ||| | Sbjct: 17668387 acgcccccaag-aaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggc 17668329 Query: 143 ggcttcgggctcattttcgtcctcaccctc 172 | |||||| ||||| || ||||||||||| Sbjct: 17668328 gtcttcggcctcatcctcctcctcaccctc 17668299 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 266 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17668255 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17668205
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full insert sequence Length = 1492 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 238 cgtcttcgtcgcgcctctcagcatcatcggtcgtgtgatcaagaccaagagtgtggagta 297 |||||||||||| || |||| ||||||| | | ||||||| ||||||||| ||||||| Sbjct: 578 cgtcttcgtcgccccgctcaccatcatcaggcaagtgatcaggaccaagagcgtggagtt 637 Query: 298 catgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttcctctacgg 357 ||||||||||| |||||| || ||||||||||||||| ||||||||||| ||||||| Sbjct: 638 catgcccttctggctctccttcttcctcaccctcagcgccgtcgtctggttcttctacgg 697 Query: 358 cctgctcat 366 ||| ||||| Sbjct: 698 cctcctcat 706
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 331 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 12981300 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 12981241 Query: 332 agcgccatcgtctggttcctctacggcctgctcat 366 |||||| ||||||||||| |||||||||| ||||| Sbjct: 12981240 agcgccgtcgtctggttcttctacggcctcctcat 12981206 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 290 gtggagtacatgcccttctccctctcc 316 ||||||||||||||||||||||||||| Sbjct: 12705158 gtggagtacatgcccttctccctctcc 12705184
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 331 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 12978075 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 12978016 Query: 332 agcgccatcgtctggttcctctacggcctgctcat 366 |||||| ||||||||||| |||||||||| ||||| Sbjct: 12978015 agcgccgtcgtctggttcttctacggcctcctcat 12977981 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 290 gtggagtacatgcccttctccctctcc 316 ||||||||||||||||||||||||||| Sbjct: 12701921 gtggagtacatgcccttctccctctcc 12701947
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 331 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 58998 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 58939 Query: 332 agcgccatcgtctggttcctctacggcctgctcat 366 |||||| ||||||||||| |||||||||| ||||| Sbjct: 58938 agcgccgtcgtctggttcttctacggcctcctcat 58904
>gb|BT017750.1| Zea mays clone EL01N0450B09.c mRNA sequence Length = 1251 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcg-tgtg 274 ||||| ||| ||||||| || |||||||||||| || || ||| ||||| ||| |||| Sbjct: 547 tctgcctcgccttctccatggccgtcttcgtcgcccccctgagcgtcatc-ttcgttgtg 605 Query: 275 atcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagc 334 |||| ||| ||||||| |||| |||||||||| |||||||| || |||||||||||| Sbjct: 606 atcaggacgaagagtgccgagttcatgcccttcaccctctccttcttcctcaccctcagc 665 Query: 335 gccatcgtctggttcctctacggcctgctcatcaaggacaaatacgtcgcgctccc 390 ||| ||| ||||||| | |||||||| ||| ||||||| |||||| ||||||| Sbjct: 666 gccgtcgcctggttcttgtacggcctcttcaccaaggacccctacgtcacgctccc 721
>gb|AY108458.1| Zea mays PCO137991 mRNA sequence Length = 991 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 216 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcgtgtga 275 ||||| ||| ||||||| || ||||||||||||||| ||||||||||||| ||| Sbjct: 76 tctgcctcgccttctccatggccgtcttcgtcgcgccgctcagcatcatcgtcaaggtgg 135 Query: 276 tcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcg 335 ||||||||||||| || |||| | ||||| || ||||||| || ||||| ||||||| Sbjct: 136 tcaagaccaagagcgtcgagttcctgcccatcagcctctccttctgcctcacgctcagcg 195 Query: 336 ccatcgtctggttcctctacggcctgctcatcaaggac 373 || ||| ||||||| ||||||||| ||| ||||||| Sbjct: 196 ccgtcgcctggttctgctacggcctcttcaccaaggac 233
>ref|NM_121320.2| Arabidopsis thaliana unknown protein AT5G13170 mRNA, complete cds Length = 1303 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 603 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 642
>gb|AY113934.1| Arabidopsis thaliana putative senescence-associated protein SAG29 (At5g13170) mRNA, complete cds Length = 910 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 468 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 507
>gb|AY045949.1| Arabidopsis thaliana putative senescence-associated protein SAG29 (At5g13170) mRNA, complete cds Length = 1291 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 604 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 643
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 55184 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 55145
>emb|BX829518.1|CNS0A267 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 936 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 415 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 454
>emb|BX830132.1|CNS0A181 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 584 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 623
>gb|AY087836.1| Arabidopsis thaliana clone 38843 mRNA, complete sequence Length = 1269 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 268 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 603 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 642
>dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence Length = 543 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccctt 306 ||||||| ||||||||||||||||||||||||||| Sbjct: 140 gtgatcaggaccaagagtgtggagtacatgccctt 174
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 331 ||||||||||| || || | ||||| |||||| ||||| |||||| || ||||| ||| Sbjct: 121269 gtgatcaagacgaaaagcgcggagttcatgccgttctcgctctccttcttcctcacgctc 121210 Query: 332 agcgccatcgtctggttcctctacggcct 360 |||||| ||| ||||||| |||||||||| Sbjct: 121209 agcgccgtcgcctggttcttctacggcct 121181 Score = 48.1 bits (24), Expect = 0.035 Identities = 60/71 (84%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| |||||||||| ||||| ||| ||||||| | | |||||||||| Sbjct: 122022 caccatcaacgccttcggctgcgtcgtcgagg-ccgcctacatcgccgtctacctcgtct 121964 Query: 83 acgcccccagg 93 ||||||||||| Sbjct: 121963 acgcccccagg 121953
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 331 ||||||||||| || || | ||||| |||||| ||||| |||||| || ||||| ||| Sbjct: 19402043 gtgatcaagacgaaaagcgcggagttcatgccgttctcgctctccttcttcctcacgctc 19401984 Query: 332 agcgccatcgtctggttcctctacggcct 360 |||||| ||| ||||||| |||||||||| Sbjct: 19401983 agcgccgtcgcctggttcttctacggcct 19401955 Score = 48.1 bits (24), Expect = 0.035 Identities = 60/71 (84%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 23 caccatcaacgctgccggctgcgtcatcgagnaccgtctacatcatcatgtacctcgtct 82 |||||||||||| |||||||||| ||||| ||| ||||||| | | |||||||||| Sbjct: 19402796 caccatcaacgccttcggctgcgtcgtcgagg-ccgcctacatcgccgtctacctcgtct 19402738 Query: 83 acgcccccagg 93 ||||||||||| Sbjct: 19402737 acgcccccagg 19402727
>gb|AY105503.1| Zea mays PCO075069 mRNA sequence Length = 549 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 267 gtcgtgtgatcaagaccaagagtgtggagtacatgcccttc 307 |||| ||||||||||||||||| || ||||||||||||||| Sbjct: 271 gtcgagtgatcaagaccaagagcgttgagtacatgcccttc 311
>ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 mRNA, complete cds Length = 986 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 552 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 595
>gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA, complete cds Length = 984 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 549 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 592
>gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete sequence Length = 937 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 553 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 596
>dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown protein, complete cds, clone: RAFL19-58-G08 Length = 471 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 52 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 95
>dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMG15 Length = 86139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 9259 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 9216
>gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, complete cds Length = 756 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 315 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 466 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 509
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 290 gtggagtacatgcccttctccctctcc 316 ||||||||||||||||||||||||||| Sbjct: 59611 gtggagtacatgcccttctccctctcc 59637
>ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 42 tgcgtcatcgagnaccgtctacatcatcatgtacctcgtctacgccccca 91 |||||||||||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 441 tgcgtcatcgag-accgtctacctcgccatgtacctcgcctacgccccca 489 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Plus Query: 206 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 265 ||||||||||||||||||| | |||| | ||||||||| ||| || | ||||||||| Sbjct: 603 ctcggctggatctgcgtcgccgtctcgctcagcgtcttcgccgctcccttgagcatcatc 662 Query: 266 ggtcgtgtgatcaagaccaagagtgtggagtacatgcccttctc 309 | | |||||| ||||||||| ||||||| |||||| ||||| Sbjct: 663 aggctggtgatccggaccaagagcgtggagttcatgccattctc 706
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 42 tgcgtcatcgagnaccgtctacatcatcatgtacctcgtctacgccccca 91 |||||||||||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 18555415 tgcgtcatcgag-accgtctacctcgccatgtacctcgcctacgccccca 18555367 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 11593501 gtgatccagactaagagcgtggagtacatgccc 11593469
>emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttctc 309 |||||||||||||| |||||| |||||||||| ||||| Sbjct: 514 gtgatcaagaccaaaagtgtgaagtacatgccattctc 551
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 42 tgcgtcatcgagnaccgtctacatcatcatgtacctcgtctacgccccca 91 |||||||||||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 96554 tgcgtcatcgag-accgtctacctcgccatgtacctcgcctacgccccca 96506
>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full insert sequence Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 42 tgcgtcatcgagnaccgtctacatcatcatgtacctcgtctacgccccca 91 |||||||||||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 441 tgcgtcatcgag-accgtctacctcgccatgtacctcgcctacgccccca 489 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Plus Query: 206 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 265 ||||||||||||||||||| | |||| | ||||||||| ||| || | ||||||||| Sbjct: 603 ctcggctggatctgcgtcgccgtctcgctcagcgtcttcgccgctcccttgagcatcatc 662 Query: 266 ggtcgtgtgatcaagaccaagagtgtggagtacatgcccttctc 309 | | |||||| ||||||||| ||||||| |||||| ||||| Sbjct: 663 aggctggtgatccggaccaagagcgtggagttcatgccattctc 706
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence Length = 1762 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 280 gaccaagagtgtggagtacatgcccttctccctctcc 316 ||||||||| ||||||| |||||||||||| |||||| Sbjct: 723 gaccaagagcgtggagttcatgcccttctcgctctcc 759
>gb|BT013320.1| Lycopersicon esculentum clone 135010F, mRNA sequence Length = 1428 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 275 atcaagaccaagagtgtggagtacatgcc 303 |||||||||||||||||||| |||||||| Sbjct: 634 atcaagaccaagagtgtggaatacatgcc 662
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19957403 gtgatcaggacgaagagcgtggagtacatgcccttct 19957439 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 23876043 gtgataaagacgaagagcgtggagtacatgccgttct 23876079 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 38249707 gtgatcaagacgaagagcgtggagttcatgcc 38249738
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 60312 gtgatcaggacgaagagcgtggagtacatgcccttct 60348
>dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D11, full insert sequence Length = 1168 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 654 gtgatcaggacgaagagcgtggagtacatgcccttct 690
>dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G10, full insert sequence Length = 1096 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 658 gtgatcaggacgaagagcgtggagtacatgcccttct 694
>dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K13, full insert sequence Length = 1213 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 659 gtgatcaggacgaagagcgtggagtacatgcccttct 695
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| |||||||||||||| Sbjct: 42092 gtgatcaagacgaagagcgtggagtacatgcc 42123
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| |||||||||||||| Sbjct: 20728868 gtgatcaagacgaagagcgtggagtacatgcc 20728899 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 aagagtgtggagtacatgcccttc 307 ||||| |||||||||||||||||| Sbjct: 29093433 aagagcgtggagtacatgcccttc 29093410
>gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complete sequence Length = 59356 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 307 ctccctctccctcacgctcaccctcagc 334 ||||||||||||||| |||||||||||| Sbjct: 45751 ctccctctccctcaccctcaccctcagc 45724
>dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B01, full insert sequence Length = 1211 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| |||||||||||||| Sbjct: 684 gtgatcaagacgaagagcgtggagtacatgcc 715
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 515 gaccacgtcgtcgtgatcaacgtcggcaagg 545 |||||||||||||||||||||| || ||||| Sbjct: 3505111 gaccacgtcgtcgtgatcaacgccgacaagg 3505081
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 tctccctctccctcacgctcaccctca 332 |||||||||||||||| |||||||||| Sbjct: 141591 tctccctctccctcaccctcaccctca 141565
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 ccttctccctctccctcacgctcacc 328 ||||||||||||||||||| |||||| Sbjct: 117677 ccttctccctctccctcaccctcacc 117702
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence Length = 187246 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 ccttctccctctccctcacgctcacc 328 ||||||||||||||||||| |||||| Sbjct: 126982 ccttctccctctccctcaccctcacc 127007
>emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chromosome 10 Contains the 5' end of a novel gene, a novel gene (MGC35285) and a CpG island, complete sequence Length = 97407 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 caaggaggggaaagaggcatggaagg 503 ||||||||||||||||| |||||||| Sbjct: 44250 caaggaggggaaagaggtatggaagg 44275
>emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chromosome 10 Contains gene DKFZP566K0524, the gene for a novel protein similar to tyrosine phosphatase (MGC35285), the 3' end of a KIAA0187 pseudogene, the 3' end of a novel gene, the gene for a novel protein similar to ARF GTPase-activating protein (MRIP2) and a CpG island, complete sequence Length = 171930 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 caaggaggggaaagaggcatggaagg 503 ||||||||||||||||| |||||||| Sbjct: 63769 caaggaggggaaagaggtatggaagg 63794
>gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, complete sequence Length = 154259 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 caaggaggggaaagaggcatggaagg 503 ||||||||||||||||| |||||||| Sbjct: 97974 caaggaggggaaagaggtatggaagg 97949
>gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, complete sequence Length = 186308 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 caaggaggggaaagaggcatggaagg 503 ||||||||||||||||| |||||||| Sbjct: 61128 caaggaggggaaagaggtatggaagg 61153
>ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1383 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1384 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 677 gtgatccagactaagagcgtggagtacatgccc 709
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1485 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 673 gtgatccagactaagagcgtggagtacatgccc 705
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 466 gtgataaagacgaagagcgtggagtacatgccgttct 502
>gb|AC008685.8| Homo sapiens chromosome 5 clone CTB-59H21, complete sequence Length = 159713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 accgtctacatcatcatgtac 75 ||||||||||||||||||||| Sbjct: 123582 accgtctacatcatcatgtac 123602
>dbj|AB205497.1| Uncultured bacterium gene for putative aminotransferase, partial cds, clone:sd2 Length = 303 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 tgaacgcgacgccggtggtgg 467 ||||||||||||||||||||| Sbjct: 36 tgaacgcgacgccggtggtgg 56
>gb|AC010591.10| Homo sapiens chromosome 5 clone CTC-447K7, complete sequence Length = 172745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 accgtctacatcatcatgtac 75 ||||||||||||||||||||| Sbjct: 26888 accgtctacatcatcatgtac 26908
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcccttct 308 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 22447 gtgataaagacgaagagcgtggagtacatgccgttct 22483
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 39790 gtgatccagactaagagcgtggagtacatgccc 39758
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full insert sequence Length = 1377 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full insert sequence Length = 1484 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 672 gtgatccagactaagagcgtggagtacatgccc 704
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full insert sequence Length = 1384 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgccc 304 |||||| |||| ||||| ||||||||||||||| Sbjct: 677 gtgatccagactaagagcgtggagtacatgccc 709
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 gccgaggtgcgcccggtcaccgag 586 ||||||||||||||||||| |||| Sbjct: 976367 gccgaggtgcgcccggtcatcgag 976390
>ref|NM_114733.2| Arabidopsis thaliana unknown protein AT3G48740 mRNA, complete cds Length = 1267 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 574 agtgtggagtacatgccctt 593
>ref|NM_122271.2| Arabidopsis thaliana MTN3 AT5G23660 (MTN3) mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 598 gtgataaagacgaaaagtgtggagtacatgcc 629
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 646 gtgatcaagaccaagagcgtcgagttcatgcc 677
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA Length = 1517 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 647 gtgatcaagaccaagagcgtcgagttcatgcc 678
>ref|XM_475994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aagagtgtggagtacatgcccttc 307 ||||| |||||||||||||||||| Sbjct: 481 aagagcgtggagtacatgcccttc 504
>gb|AC167129.5| Mus musculus chromosome 5, clone RP23-397D16, complete sequence Length = 197551 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cccttctccctctccctcac 321 |||||||||||||||||||| Sbjct: 14125 cccttctccctctccctcac 14144
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tctacatgaacgcgacgccg 460 |||||||||||||||||||| Sbjct: 2170308 tctacatgaacgcgacgccg 2170327
>ref|NM_190168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 457 gtgatcaagacgaagagcgtggagttcatgcc 488
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 tacatgcccttctccctctccctc 319 ||||| |||||||||||||||||| Sbjct: 984679 tacatccccttctccctctccctc 984656
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ctcaacatcgccggcttcgg 150 |||||||||||||||||||| Sbjct: 363989 ctcaacatcgccggcttcgg 363970
>ref|XM_365032.1| Magnaporthe grisea 70-15 hypothetical protein (MG09877.4) partial mRNA Length = 8238 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gcgtcttcgtcgcgcctctc 256 |||||||||||||||||||| Sbjct: 716 gcgtcttcgtcgcgcctctc 697
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence Length = 167372 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 112755 tgcccttctccctctccctc 112774
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 aagagtgtggagtacatgcccttc 307 ||||| |||||||||||||||||| Sbjct: 103488 aagagcgtggagtacatgcccttc 103465
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tctacatgaacgcgacgccg 460 |||||||||||||||||||| Sbjct: 2300059 tctacatgaacgcgacgccg 2300040
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 aagagtgtggagtacatgcccttc 307 ||||| |||||||||||||||||| Sbjct: 19657 aagagcgtggagtacatgcccttc 19634
>gb|AC147136.2| Pan troglodytes BAC clone CH251-334C1 from Y, complete sequence Length = 161852 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 16591 tgcccttctccctctccctc 16610
>gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, complete sequence Length = 204252 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cccttctccctctccctcac 321 |||||||||||||||||||| Sbjct: 11564 cccttctccctctccctcac 11545
>gb|AC146478.2| Pan troglodytes BAC clone CH251-409D17 from Y, complete sequence Length = 149556 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 142622 tgcccttctccctctccctc 142641
>gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, complete sequence Length = 176176 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cccttctccctctccctcac 321 |||||||||||||||||||| Sbjct: 118147 cccttctccctctccctcac 118166
>gb|BT000808.1| Arabidopsis thaliana At3g48740 mRNA sequence Length = 1176 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 574 agtgtggagtacatgccctt 593
>gb|AF542968.1| Triticum aestivum myo-inositol 1-phosphate synthase-like mRNA, partial sequence Length = 819 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 gaccacgtcgtcgtgatcaa 534 |||||||||||||||||||| Sbjct: 358 gaccacgtcgtcgtgatcaa 377
>gb|BT009043.1| Triticum aestivum clone wdk5c.pk006.i16:fis, full insert mRNA sequence Length = 790 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 gaccacgtcgtcgtgatcaa 534 |||||||||||||||||||| Sbjct: 35 gaccacgtcgtcgtgatcaa 54
>ref|XM_778876.1| PREDICTED: Strongylocentrotus purpuratus similar to Proprotein convertase subtilisin/kexin type 5 precursor (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (LOC578721), mRNA Length = 4011 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 catcaaggacaaatacgtcgcgct 387 ||||||||||||||| |||||||| Sbjct: 3837 catcaaggacaaatatgtcgcgct 3860
>gb|AY116672.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1124 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 595 gtgataaagacgaaaagtgtggagtacatgcc 626
>gb|AY096594.1| Arabidopsis thaliana putative MTN3 protein (At3g48740) mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 484 agtgtggagtacatgccctt 503
>gb|AY070412.1| Arabidopsis thaliana putative MTN3 protein (At3g48740) mRNA, complete cds Length = 1196 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AY059108.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 889 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 469 gtgataaagacgaaaagtgtggagtacatgcc 500
>gb|AY057575.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 598 gtgataaagacgaaaagtgtggagtacatgcc 629
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tctacatgaacgcgacgccg 460 |||||||||||||||||||| Sbjct: 461537 tctacatgaacgcgacgccg 461518
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 99252 tgcccttctccctctccctc 99271
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 2185 agtgtggagtacatgccctt 2166
>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19 Length = 96679 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 89301 agtgtggagtacatgccctt 89282
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence Length = 199770 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 167324 tgcccttctccctctccctc 167343
>dbj|BS000575.1| Pan troglodytes chromosome Y clone:PTB-031L12, complete sequences Length = 158061 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 122410 tgcccttctccctctccctc 122391
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 17555097 tgcccttctccctctccctc 17555078
>gb|AY078041.1| Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 870 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 484 agtgtggagtacatgccctt 503
>gb|AF361825.1| Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 1157 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AF419559.1|AF419559 Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 1172 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence Length = 167457 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tgcccttctccctctccctc 319 |||||||||||||||||||| Sbjct: 112839 tgcccttctccctctccctc 112858
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tctacatgaacgcgacgccg 460 |||||||||||||||||||| Sbjct: 1527007 tctacatgaacgcgacgccg 1527026
>ref|XM_392794.2| PREDICTED: Apis mellifera similar to CG32676-PA (LOC409273), mRNA Length = 2710 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 atcgtcctcctcctcaacatcgcc 142 ||||||||||||||| |||||||| Sbjct: 919 atcgtcctcctcctccacatcgcc 942
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 26719672 gtgatcaagaccaagagcgtcgagttcatgcc 26719641
>emb|BX822394.1|CNS0A7B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1100 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 537 agtgtggagtacatgccctt 556
>emb|BX823275.1|CNS0A6JX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 849 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 265 agtgtggagtacatgccctt 284
>emb|BX823226.1|CNS0A6JZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgtggagtacatgccctt 306 |||||||||||||||||||| Sbjct: 182 agtgtggagtacatgccctt 201
>emb|BX832292.1|CNS0A172 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1121 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 570 gtgataaagacgaaaagtgtggagtacatgcc 601
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cttctccctctccctcacgc 323 |||||||||||||||||||| Sbjct: 182190 cttctccctctccctcacgc 182209
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 tacatgcccttctccctctccctc 319 ||||||||| |||||||||||||| Sbjct: 16664 tacatgcccctctccctctccctc 16641
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 168941 gtgatcaagacgaagagcgtggagttcatgcc 168972
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 10532 gtgatcaagacgaagagcgtggagttcatgcc 10563
>gb|AC167670.1| Mus musculus BAC clone RP24-119K18 from chromosome 16, complete sequence Length = 200044 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cccttctccctctccctcac 321 |||||||||||||||||||| Sbjct: 143740 cccttctccctctccctcac 143721
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 131199 gtgatcaagaccaagagcgtcgagttcatgcc 131168
>emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chromosome 2, complete sequence Length = 86221 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aaggaggggaaagaggcatg 498 |||||||||||||||||||| Sbjct: 77261 aaggaggggaaagaggcatg 77280
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 63014 gtgatcaagaccaagagcgtcgagttcatgcc 62983
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 51905 gtgataaagacgaaaagtgtggagtacatgcc 51874
>dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F06, full insert sequence Length = 1500 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 646 gtgatcaagaccaagagcgtcgagttcatgcc 677
>dbj|AK099531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031J21, full insert sequence Length = 1161 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 601 gtgatcaagacgaagagcgtggagttcatgcc 632
>dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B21, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||||||||| || |||| |||||| Sbjct: 647 gtgatcaagaccaagagcgtcgagttcatgcc 678
>dbj|AK069614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E05, full insert sequence Length = 1363 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 aagagtgtggagtacatgcccttc 307 ||||| |||||||||||||||||| Sbjct: 817 aagagcgtggagtacatgcccttc 840
>dbj|AK067960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F10, full insert sequence Length = 1208 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 609 gtgatcaagacgaagagcgtggagttcatgcc 640
>gb|AC002992.1|AC002992 Homo sapiens chromosome Y, clone 203M13, complete sequence Length = 154848 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 tacatgcccttctccctctccctc 319 ||||||||| |||||||||||||| Sbjct: 142309 tacatgcccctctccctctccctc 142286
>gb|AY106071.1| Zea mays PCO141993 mRNA sequence Length = 1300 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||||||||| ||||| ||||||| |||||| Sbjct: 701 gtgatcaagacgaagagcgtggagttcatgcc 732
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tctacatgaacgcgacgccg 460 |||||||||||||||||||| Sbjct: 2522281 tctacatgaacgcgacgccg 2522300
>gb|AF095641.1|AF095641 Arabidopsis thaliana MTN3 homolog (MTN3) mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 gtgatcaagaccaagagtgtggagtacatgcc 303 ||||| ||||| || ||||||||||||||||| Sbjct: 573 gtgataaagacgaaaagtgtggagtacatgcc 604
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cggcaaggccgacaagagct 557 |||||||||||||||||||| Sbjct: 2085152 cggcaaggccgacaagagct 2085171
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 cccttctccctctccctcacgctc 325 |||||||||||||||||| ||||| Sbjct: 101195 cccttctccctctccctctcgctc 101218
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cccttctccctctccctcac 321 |||||||||||||||||||| Sbjct: 63132 cccttctccctctccctcac 63151
>gb|AF056325.1|AF056325 Hordeum vulgare myo-inositol 1-phosphate synthase mRNA, complete cds Length = 2152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 gaccacgtcgtcgtgatcaa 534 |||||||||||||||||||| Sbjct: 1283 gaccacgtcgtcgtgatcaa 1302
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 cccttctccctctccctcacgctc 325 ||||||||||||||||||| |||| Sbjct: 137210 cccttctccctctccctcatgctc 137233 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,589,223 Number of Sequences: 3902068 Number of extensions: 4589223 Number of successful extensions: 175281 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 173281 Number of HSP's gapped (non-prelim): 1986 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
