ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK070551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 5e-87
2ref|NM_187521.1| Oryza sativa (japonica cultivar-group), predic... 214 2e-52
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 2e-37
4gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6gb|DQ099168.1| Arachis hypogaea clone Ah1TC3B04 microsatellite s... 64 4e-07
7dbj|AB025631.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 64 4e-07
8gb|DQ099140.1| Arachis hypogaea clone AH2TC7A02 microsatellite s... 62 2e-06
9ref|NM_112867.3| Arabidopsis thaliana unknown protein AT3G19770 ... 60 7e-06
10ref|NM_001035651.1| Arabidopsis thaliana unknown protein AT3G197... 60 7e-06
11gb|AY079338.1| Arabidopsis thaliana unknown protein (At3g19770) ... 60 7e-06
12gb|AY045810.1| Arabidopsis thaliana unknown protein (At3g19770) ... 60 7e-06
13emb|BX823509.1|CNS0A4QU Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
14gb|AE006031.1| Caulobacter crescentus CB15 section 357 of 359 of... 48 0.027
15gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.6
16gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-... 42 1.6
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.6
18emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC... 42 1.6
19gb|AC132068.2| Homo sapiens chromosome 16 clone CTD-2326C4, comp... 42 1.6
20ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcrip... 40 6.5
21gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, com... 40 6.5
22gb|AC161520.6| Mus musculus chromosome 7, clone RP24-282D19, com... 40 6.5
23gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, comp... 40 6.5
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.5
25gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.5
26gb|AC136018.5| Mus musculus BAC clone RP24-125E6 from chromosome... 40 6.5
27ref|XM_759010.1| Theileria parva strain Muguga chromosome 4 hypo... 40 6.5
28gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, com... 40 6.5
29gb|AY330485.1| Saccharopolyspora erythraea amino acid permease g... 40 6.5
30emb|Z81363.2|HS179D3 Human DNA sequence from clone RP1-179D3 on ... 40 6.5
31emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on ... 40 6.5
32emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.5
33emb|BX927252.5| Zebrafish DNA sequence from clone CH211-212O10 i... 40 6.5
34gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, com... 40 6.5
35gb|AC009597.5|AC009597 Homo sapiens chromosome 8, clone RP11-33E... 40 6.5
36gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.5
37ref|NG_005189.1| Mus musculus tumor protein D52, pseudogene (Tpd... 40 6.5
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
40gb|AC010729.8| Homo sapiens BAC clone RP11-350H23 from 2, comple... 40 6.5
41dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.5
42dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
43dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
44gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, co... 40 6.5
45dbj|AP002748.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.5
46dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.5
47emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chr... 40 6.5

>dbj|AK070551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L19, full
           insert sequence
          Length = 3032

 Score =  329 bits (166), Expect = 5e-87
 Identities = 300/345 (86%), Gaps = 11/345 (3%)
 Strand = Plus / Plus

                                                                       
Query: 141 cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 194
           |||||||||||||||||||| ||||||| ||      |||||||||||||| ||||||||
Sbjct: 95  cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 154

                                                                       
Query: 195 ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 254
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 155 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 214

                                                                       
Query: 255 aagtccatcaagggctttatcatgaatttctcaaacagagcacctgatccagagagagat 314
           ||||||||||||||||||||| | |  ||||| |||||||| ||||| || ||    |||
Sbjct: 215 aagtccatcaagggctttatcgtaacgttctcgaacagagctcctgaccctgaacatgat 274

                                                                       
Query: 315 agtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacactcct 374
           ||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 275 agtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacaccccc 334

                                                                       
Query: 375 tgggctggcagttctgaagaagaactagagagtgccggtgagggcctcgagaagtatgtt 434
           |||||||| |||||||||||||||||||| ||||||     |||||| ||||| || |||
Sbjct: 335 tgggctggaagttctgaagaagaactagaaagtgcc-----gggccttgagaaatacgtt 389

                                                        
Query: 435 atgacaaagctgtataatcgggtatttgcttcggtcccggaagat 479
           |||||||||||||  ||||||||||||||||| ||||||||||||
Sbjct: 390 atgacaaagctgttcaatcgggtatttgcttctgtcccggaagat 434



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>ref|NM_187521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1680

 Score =  214 bits (108), Expect = 2e-52
 Identities = 153/168 (91%)
 Strand = Plus / Plus

                                                                       
Query: 312 gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 371
           |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| 
Sbjct: 412 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 471

                                                                       
Query: 372 ccttgggctggcagttctgaagaagaactagagagtgccggtgagggcctcgagaagtat 431
           || |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || 
Sbjct: 472 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagggccttgagaaatac 531

                                                           
Query: 432 gttatgacaaagctgtataatcgggtatttgcttcggtcccggaagat 479
           ||||||||||||||||  ||||||||||||||||| ||||||||||||
Sbjct: 532 gttatgacaaagctgttcaatcgggtatttgcttctgtcccggaagat 579



 Score =  157 bits (79), Expect = 4e-35
 Identities = 94/99 (94%)
 Strand = Plus / Plus

                                                                       
Query: 170 cgacgccttcgggtcctcgaccgcgccgctggcctggcacgacttcctcgagcgcatgcg 229
           |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21  cgacgccttcgggtccgcgaccgcgccgctggcctggcacgacttcctggagcgcatgcg 80

                                                  
Query: 230 ccagccttccgccgccgaatttgtcaagtccatcaaggg 268
           |||||| ||||||||||| || |||||||||||||||||
Sbjct: 81  ccagccctccgccgccgacttcgtcaagtccatcaaggg 119



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 2e-37
 Identities = 121/134 (90%), Gaps = 6/134 (4%)
 Strand = Plus / Plus

                                                                           
Query: 141     cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 194
               |||||||||||||||||||| ||||||| ||      |||||||||||||| ||||||||
Sbjct: 8602228 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 8602287

                                                                           
Query: 195     ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 254
               ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 8602288 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 8602347

                             
Query: 255     aagtccatcaaggg 268
               ||||||||||||||
Sbjct: 8602348 aagtccatcaaggg 8602361



 Score =  139 bits (70), Expect = 9e-30
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                           
Query: 312     gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 371
               |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| 
Sbjct: 8603302 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 8603361

                                                             
Query: 372     ccttgggctggcagttctgaagaagaactagagagtgccggtgagg 417
               || |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 8603362 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagg 8603407



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                           
Query: 415     agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttcggtcccgg 474
               ||||||| ||||| || ||||||||||||||||  ||||||||||||||||| |||||||
Sbjct: 8604389 agggccttgagaaatacgttatgacaaagctgttcaatcgggtatttgcttctgtcccgg 8604448

                    
Query: 475     aagat 479
               |||||
Sbjct: 8604449 aagat 8604453



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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score =  165 bits (83), Expect = 2e-37
 Identities = 121/134 (90%), Gaps = 6/134 (4%)
 Strand = Plus / Plus

                                                                         
Query: 141   cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 194
             |||||||||||||||||||| ||||||| ||      |||||||||||||| ||||||||
Sbjct: 83200 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 83259

                                                                         
Query: 195   ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 254
             ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 83260 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 83319

                           
Query: 255   aagtccatcaaggg 268
             ||||||||||||||
Sbjct: 83320 aagtccatcaaggg 83333



 Score =  139 bits (70), Expect = 9e-30
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                         
Query: 312   gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 371
             |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| 
Sbjct: 84274 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 84333

                                                           
Query: 372   ccttgggctggcagttctgaagaagaactagagagtgccggtgagg 417
             || |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 84334 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagg 84379



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                         
Query: 415   agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttcggtcccgg 474
             ||||||| ||||| || ||||||||||||||||  ||||||||||||||||| |||||||
Sbjct: 85361 agggccttgagaaatacgttatgacaaagctgttcaatcgggtatttgcttctgtcccgg 85420

                  
Query: 475   aagat 479
             |||||
Sbjct: 85421 aagat 85425



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 121/134 (90%), Gaps = 6/134 (4%)
 Strand = Plus / Plus

                                                                           
Query: 141     cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 194
               |||||||||||||||||||| ||||||| ||      |||||||||||||| ||||||||
Sbjct: 8600063 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 8600122

                                                                           
Query: 195     ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 254
               ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 8600123 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 8600182

                             
Query: 255     aagtccatcaaggg 268
               ||||||||||||||
Sbjct: 8600183 aagtccatcaaggg 8600196



 Score =  139 bits (70), Expect = 9e-30
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                           
Query: 312     gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 371
               |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| 
Sbjct: 8601137 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 8601196

                                                             
Query: 372     ccttgggctggcagttctgaagaagaactagagagtgccggtgagg 417
               || |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 8601197 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagg 8601242



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                           
Query: 415     agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttcggtcccgg 474
               ||||||| ||||| || ||||||||||||||||  ||||||||||||||||| |||||||
Sbjct: 8602224 agggccttgagaaatacgttatgacaaagctgttcaatcgggtatttgcttctgtcccgg 8602283

                    
Query: 475     aagat 479
               |||||
Sbjct: 8602284 aagat 8602288



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>gb|DQ099168.1| Arachis hypogaea clone Ah1TC3B04 microsatellite sequence
          Length = 288

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 207 cacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtcaagtccatcaag 266
           ||||||||||||||||| |||||||| || ||||||||||| || |||||  ||||||||
Sbjct: 81  cacgacttcctcgagcggatgcgccaaccctccgccgccgatttcgtcaaagccatcaag 140



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>dbj|AB025631.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPN9
          Length = 81035

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 415 agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 351 agggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 402



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>gb|DQ099140.1| Arachis hypogaea clone AH2TC7A02 microsatellite sequence
          Length = 401

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 207 cacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtcaag 257
           ||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 291 cacgacttcctcgagcggatgcgccaaccctccgccgccgatttcgtcaag 241



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>ref|NM_112867.3| Arabidopsis thaliana unknown protein AT3G19770 transcript variant
           AT3G19770.1 mRNA, complete cds
          Length = 2010

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 417 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 327 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 376



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>ref|NM_001035651.1| Arabidopsis thaliana unknown protein AT3G19770 transcript variant
           AT3G19770.2 mRNA, complete cds
          Length = 2010

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 417 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 327 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 376



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>gb|AY079338.1| Arabidopsis thaliana unknown protein (At3g19770) mRNA, complete cds
          Length = 1594

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 417 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 241 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 290



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>gb|AY045810.1| Arabidopsis thaliana unknown protein (At3g19770) mRNA, complete cds
          Length = 2013

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 417 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 320 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 369



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>emb|BX823509.1|CNS0A4QU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS45ZG02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1988

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 417 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 466
           ||||| ||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 305 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 354



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>gb|AE006031.1| Caulobacter crescentus CB15 section 357 of 359 of the complete genome
          Length = 10388

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 162  ggcggcgccgacgccttcgggtcc 185
            ||||||||||||||||||||||||
Sbjct: 4401 ggcggcgccgacgccttcgggtcc 4424



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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 152     gacgatggagggcggcgccga 172
               |||||||||||||||||||||
Sbjct: 2640282 gacgatggagggcggcgccga 2640262



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>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence
          Length = 218074

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 62     cctttgacctcccccacccccatct 86
              ||||||| |||||||||||||||||
Sbjct: 155267 cctttgatctcccccacccccatct 155243



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    tcctcgagcgcatgcgccagc 234
              |||||||||||||||||||||
Sbjct: 890505 tcctcgagcgcatgcgccagc 890525



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>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
          Length = 103534

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 415   agggcctcgagaagtatgttatgacaaag 443
             ||||||| ||||||||||| |||||||||
Sbjct: 32212 agggcctggagaagtatgtcatgacaaag 32184



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>gb|AC132068.2| Homo sapiens chromosome 16 clone CTD-2326C4, complete sequence
          Length = 142641

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 62    cctttgacctcccccacccccatct 86
             ||||||| |||||||||||||||||
Sbjct: 63384 cctttgatctcccccacccccatct 63360



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>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1
            (LOC468024), mRNA
          Length = 13500

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   ctttgacctcccccacccccatct 86
            |||||| |||||||||||||||||
Sbjct: 3416 ctttgatctcccccacccccatct 3393



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>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence
          Length = 185997

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    tggagggcggcgccgacgcc 176
              ||||||||||||||||||||
Sbjct: 177169 tggagggcggcgccgacgcc 177150



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>gb|AC161520.6| Mus musculus chromosome 7, clone RP24-282D19, complete sequence
          Length = 165232

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   caagagttccttgaaaatat 346
             ||||||||||||||||||||
Sbjct: 93176 caagagttccttgaaaatat 93157



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>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence
          Length = 175836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   tggagggcggcgccgacgcc 176
             ||||||||||||||||||||
Sbjct: 85198 tggagggcggcgccgacgcc 85179



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     gggcggcgccgacgccttcg 180
               ||||||||||||||||||||
Sbjct: 2999677 gggcggcgccgacgccttcg 2999696



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   gggcggcgccgacgccttcg 180
             ||||||||||||||||||||
Sbjct: 48537 gggcggcgccgacgccttcg 48518



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>gb|AC136018.5| Mus musculus BAC clone RP24-125E6 from chromosome 7, complete sequence
          Length = 210491

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    caagagttccttgaaaatat 346
              ||||||||||||||||||||
Sbjct: 188868 caagagttccttgaaaatat 188887



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>ref|XM_759010.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0468) partial mRNA
          Length = 2430

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 427 agtatgttatgacaaagctg 446
           ||||||||||||||||||||
Sbjct: 308 agtatgttatgacaaagctg 289



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>gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, complete sequence
          Length = 198442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    cctcccccacccccatcttc 88
             ||||||||||||||||||||
Sbjct: 82351 cctcccccacccccatcttc 82332



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>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
             transport protein, helix-turn-helix regulator (pkeRI),
             P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
             P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
             PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
             cds; pkeAIV gene, complete sequence; type I PKS,
             monooxygenases, transporter, ketoacyl-ACP synthase
             (typeII), acyl carrier protien, amino transferase, and
             DNA-binding protein genes, complete cds; and unknown genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tcccccctcccgatccggcg 152
             ||||||||||||||||||||
Sbjct: 66590 tcccccctcccgatccggcg 66609



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>emb|Z81363.2|HS179D3 Human DNA sequence from clone RP1-179D3 on chromosome X Contains the
            5' end of the ELF4 gene for E74-like factor 4 (ets domain
            transcription factor) (MEF, ELFR) and 2 CpG islands,
            complete sequence
          Length = 49217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   ccccacccccatcttcagca 92
            ||||||||||||||||||||
Sbjct: 9695 ccccacccccatcttcagca 9676



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>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a
             DEAD-box protein pseudogene and the gene for a novel
             E2F-like protein (LOC51270), complete sequence
          Length = 148864

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    acctcccccacccccatctt 87
             ||||||||||||||||||||
Sbjct: 57028 acctcccccacccccatctt 57047



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     gggcggcgccgacgccttcg 180
               ||||||||||||||||||||
Sbjct: 3894139 gggcggcgccgacgccttcg 3894120



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>emb|BX927252.5| Zebrafish DNA sequence from clone CH211-212O10 in linkage group 5,
             complete sequence
          Length = 176261

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   cctcgagaagtatgttatga 438
             ||||||||||||||||||||
Sbjct: 90723 cctcgagaagtatgttatga 90704



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>gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, complete sequence
          Length = 163180

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    acctcccccacccccatctt 87
             ||||||||||||||||||||
Sbjct: 46447 acctcccccacccccatctt 46428



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>gb|AC009597.5|AC009597 Homo sapiens chromosome 8, clone RP11-33E15, complete sequence
          Length = 169479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ttctcaaacagagcacctga 301
             ||||||||||||||||||||
Sbjct: 32092 ttctcaaacagagcacctga 32111



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ccgctgatccgaaccgccga 126
              ||||||||||||||||||||
Sbjct: 581816 ccgctgatccgaaccgccga 581835



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ccgctgatccgaaccgccga 126
              ||||||||||||||||||||
Sbjct: 581790 ccgctgatccgaaccgccga 581809



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>ref|NG_005189.1| Mus musculus tumor protein D52, pseudogene (Tpd52-ps) on chromosome
           8
          Length = 2210

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 tggagggcggcgccgacgcc 176
           ||||||||||||||||||||
Sbjct: 9   tggagggcggcgccgacgcc 28



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 151      cgacgatggagggcggcgcc 170
                ||||||||||||||||||||
Sbjct: 13545483 cgacgatggagggcggcgcc 13545502



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 145      atccggcgacgatggagggcggcg 168
                |||||||||| |||||||||||||
Sbjct: 27199384 atccggcgaccatggagggcggcg 27199361



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>gb|AC010729.8| Homo sapiens BAC clone RP11-350H23 from 2, complete sequence
          Length = 191934

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     acctcccccacccccatctt 87
              ||||||||||||||||||||
Sbjct: 100549 acctcccccacccccatctt 100568



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 164     cggcgccgacgccttcgggtcctcgaccgcgccgct 199
               |||||||||||  ||||| | |||||||||||||||
Sbjct: 2436283 cggcgccgacgagttcggcttctcgaccgcgccgct 2436248



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>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   atccggcgacgatggagggcggcg 168
             |||||||||| |||||||||||||
Sbjct: 56400 atccggcgaccatggagggcggcg 56377



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>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1175F05
          Length = 126842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    cgacgatggagggcggcgcc 170
              ||||||||||||||||||||
Sbjct: 120411 cgacgatggagggcggcgcc 120430



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>gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, complete sequence
          Length = 184753

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 62     cctttgacctcccccacccccatc 85
              |||||| |||||||||||||||||
Sbjct: 126212 cctttgtcctcccccacccccatc 126189



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>dbj|AP002748.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-3074O7, complete
             sequence
          Length = 176017

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   aagtccatcaagggctttat 274
             ||||||||||||||||||||
Sbjct: 17477 aagtccatcaagggctttat 17496



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>dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-867G23, complete
              sequences
          Length = 196662

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    aagtccatcaagggctttat 274
              ||||||||||||||||||||
Sbjct: 184571 aagtccatcaagggctttat 184590



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>emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete
              sequence
          Length = 227165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     cctcccccacccccatcttc 88
              ||||||||||||||||||||
Sbjct: 118261 cctcccccacccccatcttc 118280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,197
Number of Sequences: 3902068
Number of extensions: 4097197
Number of successful extensions: 89473
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88428
Number of HSP's gapped (non-prelim): 1043
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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