| Clone Name | baal1e08 |
|---|---|
| Clone Library Name | barley_pub |
>SC5A1_SHEEP (P53791) Sodium/glucose cotransporter 1 (Na(+)/glucose| cotransporter 1) (High affinity sodium-glucose cotransporter) Length = 664 Score = 32.0 bits (71), Expect = 1.4 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 96 ILLGALLAFLKPVASSRQHELCWFCKDSKEE 188 I++ A+ F KP+A + LCW ++SKEE Sbjct: 539 IVILAISLFTKPIADVHLYRLCWSLRNSKEE 569
>YE25_CAEEL (Q20593) Hypothetical protein F49C12.5| Length = 507 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +1 Query: 163 GSARIPKRRRTTKASEAADRQLREGQFPDLNLLPVVEALNTGGSLSINEPVSHRQPPPMV 342 G++ IP + R KA + + N L +V ++N S NE H PP +V Sbjct: 34 GTSPIPVKERPLKAFITSAYYYSSSKSLGKNALALVMSINL--VKSPNELAQHPNPPELV 91 Query: 343 VSLGYETTQVVVSS 384 +S +TT ++V + Sbjct: 92 ISAENDTTSIMVKT 105
>CCDC9_MOUSE (Q8VC31) Coiled-coil domain-containing protein 9| Length = 543 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -1 Query: 107 PQENXRRLAGVGRSGWGWE----ERLGFGVGGRGETXVG 3 PQ+ R AGVGR+ GWE E+L G GGRG G Sbjct: 96 PQQGGR--AGVGRASQGWEDGAGEQLRGGPGGRGRRGRG 132
>GCST_PHOLL (Q7N197) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage| system T protein) Length = 364 Score = 30.4 bits (67), Expect = 4.1 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 337 MVVSLGYETTQVVVSSAA-----AGSNIGMNSFPINVEVIDDDVAIYTSGPPPQARQQSS 501 +V L + ++VV+SA A N + ++P++++V DD I GP QA+ +S Sbjct: 100 IVYYLSNDFYRLVVNSATREKDLAWINEHVANYPVDIQVRDDLALIAVQGPDAQAKVES- 158 Query: 502 RTGPITVIIDDDSETTAG 555 ++ D+ +T AG Sbjct: 159 ------LLNDEQKQTIAG 170
>FMT_WOLPM (Q73GR6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 299 Score = 30.4 bits (67), Expect = 4.1 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +1 Query: 409 MNSFPINVEVIDDDVAIYTSGPPPQARQQSSRTGPITVIIDDDSETTAGP 558 +NS + ++ + VA+YT P P R Q P+ VI ++ + P Sbjct: 13 VNSLSLLLKSKSEVVAVYTKAPKPSGRGQKPTKSPVHVIAEESNIEVCTP 62
>RL6_HALSA (Q9HPB8) 50S ribosomal protein L6P (HL10)| Length = 177 Score = 29.6 bits (65), Expect = 7.0 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 418 FPINVEVIDDDVAIYTSGPPPQARQQSSRTGPITVIIDDDSETTAGPAGE 567 FP+ V+V ++V I AR+ R G V++DD+ T +GP+ E Sbjct: 91 FPMQVDVEGEEVVIQNFLGEKAARRTQIR-GDTDVVVDDEEVTLSGPSIE 139
>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 17) (ADAM-TS 17) (ADAM-TS17) Length = 1095 Score = 29.6 bits (65), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -2 Query: 367 VWSRNPG*PP*EGAACVRQAH*WRVNPQY*VLQPLEASSGP 245 VW +PG + AA V WRV P L PL A+ GP Sbjct: 19 VWGLDPGTAVGDAAADVEVVLPWRVRPDDVHLPPLPAAPGP 59
>RR19_PORPU (P51310) Chloroplast 30S ribosomal protein S19| Length = 92 Score = 29.6 bits (65), Expect = 7.0 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Frame = +1 Query: 220 RQLREGQFPDLNLLPVVEALNTGGSLSINEPVSHRQP--PPMV-----VSLGYETTQVVV 378 R + +G F D++LL +EALNT G + + S P M+ V G + V V Sbjct: 3 RSIHKGPFIDVSLLTRIEALNTSGKKEVIKTWSRASTIIPDMIGHTIAVYNGKQHFPVFV 62 Query: 379 SSAAAGSNIG 408 S G +G Sbjct: 63 SDQMVGHKLG 72
>CCNA2_MOUSE (P51943) Cyclin-A2 (Cyclin-A)| Length = 422 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 469 GPPPQARQQSSRTGPITVIIDDDSETTAGPAGEALDE 579 GP PQ + ++ R P+ + +D TAGP+ +A+ + Sbjct: 51 GPAPQQKLKTRRVAPLKDLPINDEHVTAGPSWKAVSK 87
>ALK_HUMAN (Q9UM73) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1620 Score = 29.3 bits (64), Expect = 9.2 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -1 Query: 62 WGWEERLGFGVGGRG 18 WGWE R GFG GG G Sbjct: 913 WGWETRGGFGGGGGG 927
>CDH_ENTCL (Q9Z6C1) CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26)| (CDP-diacylglycerol phosphatidylhydrolase) (CDP-diglyceride hydrolase) Length = 247 Score = 29.3 bits (64), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 275 HSILGVHSPLMSLSHTGSPLLWWLAWVTRPHRSWCH 382 + I G SPL++ +HT P +WLAW +R + H Sbjct: 78 YRINGTESPLLTEAHT--PNFFWLAWQSRSFMTLKH 111
>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = +1 Query: 139 HRGSMSSAGSARIPKRRRTTKASEAADRQLREGQFPDLNLLPVVEALNTGGSLSINEPVS 318 +RG+++ AG P R R+ + RQ+R G FPD + G++++ +P Sbjct: 139 YRGTLTEAGRPS-PWRERSPDENLELFRQMRAGTFPDGTRTLRAKIDMASGNINLRDPAL 197 Query: 319 HR 324 +R Sbjct: 198 YR 199
>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = +1 Query: 139 HRGSMSSAGSARIPKRRRTTKASEAADRQLREGQFPDLNLLPVVEALNTGGSLSINEPVS 318 +RG+++ AG P R R+ + RQ+R G FPD + G++++ +P Sbjct: 139 YRGTLTEAGRPS-PWRERSPDENLELFRQMRAGTFPDGTRTLRAKIDMASGNINLRDPAL 197 Query: 319 HR 324 +R Sbjct: 198 YR 199
>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1621 Score = 29.3 bits (64), Expect = 9.2 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -1 Query: 62 WGWEERLGFGVGGRG 18 WGWE R GFG GG G Sbjct: 917 WGWETRGGFGGGGGG 931 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.128 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,430,301 Number of Sequences: 219361 Number of extensions: 1870137 Number of successful extensions: 3929 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3796 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3927 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)