ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1e05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119062 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 119003 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119002 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 118943 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118942 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 118883 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118882 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118823 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118822 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118763 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118762 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118703 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118702 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118643 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118642 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118583 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118582 gttcgtccacggagggtgagtcagggcctaagatca 118547 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 96153 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 96213 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 96273 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96274 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 96333 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 96393 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96453 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96454 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96513 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96514 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96573 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96574 gttcgtccacggagggtgagtcagggcctaagatca 96609
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119062 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 119003 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119002 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 118943 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118942 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 118883 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118882 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118823 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118822 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118763 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118762 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118703 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118702 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118643 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118642 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118583 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118582 gttcgtccacggagggtgagtcagggcctaagatca 118547 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 96153 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 96213 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 96273 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96274 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 96333 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 96393 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96453 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96454 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96513 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96514 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96573 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96574 gttcgtccacggagggtgagtcagggcctaagatca 96609
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119011 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 118952 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118951 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 118892 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118891 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 118832 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118831 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118772 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118771 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118712 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118711 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118652 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118651 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118592 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118591 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118532 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118531 gttcgtccacggagggtgagtcagggcctaagatca 118496 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96039 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 96098 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96099 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 96158 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96159 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 96218 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96219 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 96278 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96279 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 96338 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96339 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96398 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96399 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96458 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96459 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96518 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96519 gttcgtccacggagggtgagtcagggcctaagatca 96554
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508672 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 31508731 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508732 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 31508791 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508792 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 31508851 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508852 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 31508911 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508912 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 31508971 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508972 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 31509031 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509032 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 31509091 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509092 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 31509151 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 31509152 gttcgtccacggagggtgagtcagggcctaagatca 31509187 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 114 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 174 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 234 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 294 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 354 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 414 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 474 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 581 bits (293), Expect = e-163 Identities = 299/301 (99%) Strand = Plus / Minus Query: 216 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 276 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 336 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 396 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 456 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 515 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 516 a 516 | Sbjct: 27320363 a 27320363 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 130 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 189 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 190 taaaggaggtggggg 204 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 133 gtcgagagggaaacagcccggatcaccagctaaggccc 170 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 32 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 86 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83924 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 83865 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83864 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 83805 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83804 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 83745 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83744 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 83685 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83684 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 83625 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83624 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 83565 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83564 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 83505 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83504 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 83445 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 83444 gttcgtccacggagggtgagtcagggcctaagatca 83409
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 118972 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 118912 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 118852 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118851 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118792 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118791 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118732 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118672 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118612 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118611 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118552 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118551 gttcgtccacggagggtgagtcagggcctaagatca 118516 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96087 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 96146 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96147 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 96206 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96207 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 96266 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96267 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 96326 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96327 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 96386 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96387 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96446 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96447 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96506 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96507 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96566 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96567 gttcgtccacggagggtgagtcagggcctaagatca 96602
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123135 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 123194 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123195 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 123254 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123255 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 123314 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123315 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 123374 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123375 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 123434 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123435 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 123494 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123495 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 123554 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123555 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 123614 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 123615 gttcgtccacggagggtgagtcagggcctaagatca 123650 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14861 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 14920 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14921 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 14980 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14981 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 15040 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15041 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 15100 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15101 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 15160 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15161 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 15220 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15221 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 15280 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15281 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 15340 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 15341 gttcgtccacggagggtgagtcagggcctaagatca 15376
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141669 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 141728 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141729 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 141788 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141789 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 141848 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141849 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 141908 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141909 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 141968 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141969 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 142028 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142029 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 142088 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142089 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 142148 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 142149 gttcgtccacggagggtgagtcagggcctaagatca 142184
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269021 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 9269080 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269081 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 9269140 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269141 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 9269200 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269201 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 9269260 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269261 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 9269320 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269321 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 9269380 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269381 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 9269440 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269441 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 9269500 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 9269501 gttcgtccacggagggtgagtcagggcctaagatca 9269536 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228521 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 9228580 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228581 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 9228640 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228641 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 9228700 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228701 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 9228760 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228761 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 9228820 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228821 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 9228880 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228881 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 9228940 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228941 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 9229000 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 9229001 gttcgtccacggagggtgagtcagggcctaagatca 9229036 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165109 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 9165168 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165169 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 9165228 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165229 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 9165288 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165289 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 9165348 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165349 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 9165408 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165409 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 9165468 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165469 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 9165528 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165529 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 9165588 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 9165589 gttcgtccacggagggtgagtcagggcctaagatca 9165624 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056935 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 9056994 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056995 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 9057054 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057055 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 9057114 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057115 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 9057174 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057175 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 9057234 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057235 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 9057294 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057295 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 9057354 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057355 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 9057414 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 9057415 gttcgtccacggagggtgagtcagggcctaagatca 9057450
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939006 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 19939065 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939066 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 19939125 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939126 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 19939185 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939186 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 19939245 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939246 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 19939305 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939306 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 19939365 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939366 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 19939425 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939426 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 19939485 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 19939486 gttcgtccacggagggtgagtcagggcctaagatca 19939521 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276425 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 10276366 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276365 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 10276306 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276305 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 10276246 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276245 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 10276186 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276185 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 10276126 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276125 ggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 10276066 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276065 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 10276006 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276005 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 10275946 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 10275945 gttcgtccacggagggtgagtcagggcctaagatca 10275910 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387873 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 10387932 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387933 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 10387992 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387993 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 10388052 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388053 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 10388112 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388113 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 10388172 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10388173 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgc 10388232 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388233 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 10388292 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388293 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 10388352 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||| ||||||||||||||||||||||||| Sbjct: 10388353 gttcgtccacagagggtgagtcagggcctaagatca 10388388 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 270 gatcgagcgcccttgcgctgaagatgaacggggctaagc 308 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 39 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 98 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 99 tcggccagtgagacgatgggggataagcttcatcgtcgagag 140 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 211 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241260 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 9241201 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241200 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 9241141 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241140 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 9241081 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241080 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 9241021 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241020 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 9240961 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240960 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 9240901 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240900 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 9240841 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240840 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 9240781 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 9240780 gttcgtccacggagggtgagtcagggcctaagatca 9240745 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 4 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 63 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 64 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 123 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 124 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 169 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 158 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 211 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 212 acagccaggaggtttgcctagaagcagccaccctttaaagag 253 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 319 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 365 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 468 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||| |||| |||||||| |||| |||| | |||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatca 22198981 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagct 322 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 157 accagctaaggcccctaaatgaccgctcagtgataaagga 196 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599188 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 31599247 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599248 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 31599307 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599308 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 31599367 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599368 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 31599427 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599428 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 31599487 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599488 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 31599547 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599548 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 31599607 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599608 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 31599667 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 31599668 gttcgtccacggagggtgagtcagggcctaagatca 31599703 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 114 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 174 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 234 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 294 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 354 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 414 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 474 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 581 bits (293), Expect = e-163 Identities = 299/301 (99%) Strand = Plus / Minus Query: 216 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 276 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 336 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 396 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 456 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 515 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 516 a 516 | Sbjct: 27411686 a 27411686 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 130 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 189 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 190 taaaggaggtggggg 204 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 133 gtcgagagggaaacagcccggatcaccagctaaggccc 170 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 32 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 86 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47037 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 46978 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46977 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 46918 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46917 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 46858 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46857 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 46798 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46797 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 46738 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46737 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 46678 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46677 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 46618 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46617 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 46558 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 46557 gttcgtccacggagggtgagtcagggcctaagatca 46522
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52473 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 52414 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52413 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 52354 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52353 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 52294 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52293 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 52234 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52233 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 52174 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52173 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 52114 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52113 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 52054 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52053 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 51994 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 51993 gttcgtccacggagggtgagtcagggcctaagatca 51958
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 532 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 592 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 652 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 712 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 772 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 832 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 892 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 952 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 953 gttcgtccacggagggtgagtcagggcctaagatca 988
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 727 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 787 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 847 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 907 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 908 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 967 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1027 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 1087 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 1147 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1148 gttcgtccacggagggtgagtcagggcctaagatca 1183
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 598 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 658 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 718 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 778 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 838 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 898 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 958 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 1018 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1019 gttcgtccacggagggtgagtcagggcctaagatca 1054
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 348 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 408 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 468 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 528 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 588 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 648 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 708 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 768 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 769 gttcgtccacggagggtgagtcagggcctaagatca 804
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 727 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 787 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 847 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 907 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 908 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 967 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1027 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 1087 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 1147 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1148 gttcgtccacggagggtgagtcagggcctaagatca 1183
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950282 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 19950341 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950342 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 19950401 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950402 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 19950461 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950462 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 19950521 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950522 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 19950581 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950582 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 19950641 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950642 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 19950701 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950702 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 19950761 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 19950762 gttcgtccacggagggtgagtcagggcctaagatca 19950797 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282464 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 10282405 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282404 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 10282345 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282344 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 10282285 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282284 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 10282225 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282224 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 10282165 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282164 ggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 10282105 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282104 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 10282045 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282044 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 10281985 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 10281984 gttcgtccacggagggtgagtcagggcctaagatca 10281949 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393912 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 10393971 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393972 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 10394031 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394032 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 10394091 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394092 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 10394151 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394152 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 10394211 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10394212 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgc 10394271 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394272 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 10394331 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394332 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 10394391 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||| ||||||||||||||||||||||||| Sbjct: 10394392 gttcgtccacagagggtgagtcagggcctaagatca 10394427 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 270 gatcgagcgcccttgcgctgaagatgaacggggctaagc 308 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 39 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 98 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 99 tcggccagtgagacgatgggggataagcttcatcgtcgagag 140 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 211 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119005 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 118946 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118945 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 118886 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118885 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 118826 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118825 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118766 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118765 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118706 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118705 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118646 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118645 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118586 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118585 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118526 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118525 gttcgtccacggagggtgagtcagggcctaagatca 118490 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96034 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 96093 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 96153 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 96213 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 96273 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96274 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 96333 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96393 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96453 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96454 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96513 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96514 gttcgtccacggagggtgagtcagggcctaagatca 96549
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119197 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 119138 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119137 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 119078 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119077 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 119018 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119017 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 118958 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 118898 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 118838 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 118778 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118777 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 118718 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 118717 gttcgtccacggagggtgagtcagggcctaagatca 118682 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95697 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 95756 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95757 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 95816 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95817 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 95876 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 95936 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95937 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 95996 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95997 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 96056 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96057 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 96116 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96117 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 96176 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96177 gttcgtccacggagggtgagtcagggcctaagatca 96212
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117978 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 117919 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117918 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 117859 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117858 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 117799 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117798 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 117739 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117738 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 117679 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117678 ggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 117619 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117618 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 117559 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117558 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 117499 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 117498 gttcgtccacggagggtgagtcagggcctaagatca 117463
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44021 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 43962 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43961 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 43902 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43901 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 43842 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43841 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 43782 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43781 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 43722 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43721 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 43662 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43661 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 43602 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43601 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 43542 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 43541 gttcgtccacggagggtgagtcagggcctaagatca 43506 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21096 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 21155 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21156 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 21215 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21216 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 21275 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21276 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 21335 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21336 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 21395 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21396 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 21455 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21456 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 21515 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21516 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 21575 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 21576 gttcgtccacggagggtgagtcagggcctaagatca 21611
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57750 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 57691 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57690 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 57631 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57630 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 57571 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57570 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 57511 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57510 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 57451 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57450 ggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 57391 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57390 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 57331 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57330 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 57271 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 57270 gttcgtccacggagggtgagtcagggcctaagatca 57235
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 592 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 532 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 472 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 412 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 352 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 292 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 232 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 172 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 171 gttcgtccacggagggtgagtcagggcctaagatca 136
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122861 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 122802 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122801 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 122742 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122741 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 122682 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122681 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 122622 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122621 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 122562 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122561 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 122502 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122501 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 122442 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122441 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 122382 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 122381 gttcgtccacggagggtgagtcagggcctaagatca 122346 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99976 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 100035 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100036 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 100095 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100096 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 100155 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100156 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 100215 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100216 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 100275 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100276 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 100335 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100336 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 100395 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100396 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 100455 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 100456 gttcgtccacggagggtgagtcagggcctaagatca 100491
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 350 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 410 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 470 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 530 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 590 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 650 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 651 cttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagcgagaatgtcggctt 710 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 770 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 771 gttcgtccacggagggtgagtcagggcctaagatca 806
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123578 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 123519 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123518 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 123459 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123458 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 123399 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123398 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 123339 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123338 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 123279 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123278 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 123219 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123218 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 123159 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123158 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 123099 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 123098 gttcgtccacggagggtgagtcagggcctaagatca 123063 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100653 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 100712 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100713 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 100772 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100773 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 100832 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100833 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 100892 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100893 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 100952 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100953 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 101012 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101013 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 101072 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101073 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 101132 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 101133 gttcgtccacggagggtgagtcagggcctaagatca 101168
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 726 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 786 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 846 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 gctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 906 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 966 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1026 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1027 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 1086 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 1146 Query: 481 gttcgtccacggagggtgagtcagggcctaaga 513 ||||||||||||||||||||||||||||||||| Sbjct: 1147 gttcgtccacggagggtgagtcagggcctaaga 1179
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94265 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 94324 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94325 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 94384 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94385 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 94444 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94445 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 94504 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94505 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 94564 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 94565 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgc 94624 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94625 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 94684 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94685 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 94744 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||| ||||||||||||||||||||||||| Sbjct: 94745 gttcgtccacagagggtgagtcagggcctaagatca 94780
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28329 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 28388 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28389 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 28448 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28449 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 28508 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28509 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 28568 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28569 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 28628 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 28629 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgc 28688 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28689 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 28748 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28749 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 28808 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||| ||||||||||||||||||||||||| Sbjct: 28809 gttcgtccacagagggtgagtcagggcctaagatca 28844
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 952 bits (480), Expect = 0.0 Identities = 509/516 (98%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122801 aggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactct 122743 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122742 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 122683 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122682 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgacc 122623 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 122622 gctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcc 122563 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 122562 accctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacgg 122504 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122503 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 122444 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122443 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 122384 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122383 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 122324 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 122323 gttcgtccacggagggtgagtcagggcctaagatca 122288 Score = 952 bits (480), Expect = 0.0 Identities = 509/516 (98%), Gaps = 2/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99936 aggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactct 99994 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99995 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 100054 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 100055 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgacc 100114 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100115 gctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcc 100174 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 100175 accctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacgg 100233 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100234 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 100293 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100294 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 100353 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100354 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 100413 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 100414 gttcgtccacggagggtgagtcagggcctaagatca 100449
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 952 bits (480), Expect = 0.0 Identities = 509/516 (98%), Gaps = 2/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6289 aggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactct 6347 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6348 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 6407 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6408 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgacc 6467 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 6468 gctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcc 6527 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6528 accctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacgg 6586 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6587 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 6646 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6647 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 6706 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6707 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 6766 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 6767 gttcgtccacggagggtgagtcagggcctaagatca 6802
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 952 bits (480), Expect = 0.0 Identities = 509/516 (98%), Gaps = 2/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 877 aggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactct 935 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 995 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 996 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgacc 1055 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1056 gctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcc 1115 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 1116 accctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacgg 1174 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1175 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1234 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 cttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 1294 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 1354 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1355 gttcgtccacggagggtgagtcagggcctaagatca 1390
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 936 bits (472), Expect = 0.0 Identities = 475/476 (99%) Strand = Plus / Minus Query: 41 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 101 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 161 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 221 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 281 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 341 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 400 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 401 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 461 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 44
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 908 bits (458), Expect = 0.0 Identities = 458/458 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526504 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 33526563 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526564 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 33526623 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526624 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 33526683 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526684 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 33526743 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526744 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 33526803 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526804 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 33526863 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526864 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 33526923 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaa 458 |||||||||||||||||||||||||||||||||||||| Sbjct: 33526924 gagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 123 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 182 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 183 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 242 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 243 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 303 ctaagcgatctgccgaagctgtgggatgtcaaaat 337 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 463 caaggtttcctccgcaaggttcgtcca 489 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 270 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 311 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 399 gcggaagcgagaatgtcggcttgagtaac 427 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 419 ttgagtaacgaaaacattggtgagaatc 446 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 908 bits (458), Expect = 0.0 Identities = 458/458 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71701 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 71760 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71761 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 71820 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71821 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 71880 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71881 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 71940 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71941 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 72000 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72001 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 72060 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72061 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 72120 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaa 458 |||||||||||||||||||||||||||||||||||||| Sbjct: 72121 gagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 419 ttgagtaacgaaaacattggtgagaatc 446 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 908 bits (458), Expect = 0.0 Identities = 458/458 (100%) Strand = Plus / Plus Query: 59 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 420 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggttcgtccacggagggtgagtcagggcctaagatca 458
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 880 bits (444), Expect = 0.0 Identities = 498/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 864 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 923 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 924 gaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggg 983 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1043 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1044 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1103 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1104 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1163 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1164 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1223 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1224 cttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggctt 1283 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1284 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 1343 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1344 gttcgtccacggagggtgagtcagggcctaagatca 1379
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 880 bits (444), Expect = 0.0 Identities = 498/516 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 132133 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 132074 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 132073 gaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggg 132014 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132013 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 131954 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 131953 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 131894 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131893 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 131834 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131833 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 131774 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 131773 cttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggctt 131714 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131713 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 131654 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 131653 gttcgtccacggagggtgagtcagggcctaagatca 131618 Score = 880 bits (444), Expect = 0.0 Identities = 498/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104631 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 104690 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 104691 gaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggg 104750 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104751 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 104810 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 104811 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 104870 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104871 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 104930 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104931 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 104990 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 104991 cttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggctt 105050 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105051 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 105110 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 105111 gttcgtccacggagggtgagtcagggcctaagatca 105146
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 880 bits (444), Expect = 0.0 Identities = 498/516 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 133094 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 133035 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 133034 gaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggg 132975 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132974 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 132915 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 132914 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 132855 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132854 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 132795 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132794 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 132735 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 132734 cttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggctt 132675 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132674 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 132615 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 132614 gttcgtccacggagggtgagtcagggcctaagatca 132579 Score = 880 bits (444), Expect = 0.0 Identities = 498/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 105555 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 105614 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 105615 gaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggg 105674 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105675 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 105734 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 105735 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 105794 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105795 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 105854 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105855 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 105914 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 105915 cttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggctt 105974 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105975 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 106034 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 106035 gttcgtccacggagggtgagtcagggcctaagatca 106070
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 872 bits (440), Expect = 0.0 Identities = 497/516 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 138639 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 138580 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138579 gaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggggg 138520 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138519 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 138460 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 138459 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 138400 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138399 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 138340 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138339 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 138280 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||| ||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 138279 cttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggctt 138220 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 138219 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 138160 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 138159 gttcgtccacggagggtgagtcagggcctaagatca 138124 Score = 872 bits (440), Expect = 0.0 Identities = 497/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 110458 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 110517 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110518 gaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggggg 110577 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110578 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 110637 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 110638 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 110697 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110698 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 110757 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 110758 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 110817 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||| ||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 110818 cttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggctt 110877 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110878 gagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaag 110937 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 110938 gttcgtccacggagggtgagtcagggcctaagatca 110973
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 872 bits (440), Expect = 0.0 Identities = 440/440 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 729 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 789 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 849 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 909 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 969 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 1029 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 1089 Query: 421 gagtaacgaaaacattggtg 440 |||||||||||||||||||| Sbjct: 1090 gagtaacgaaaacattggtg 1109
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 864 bits (436), Expect = 0.0 Identities = 496/516 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 141242 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 141183 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 141182 gaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatggggg 141123 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141122 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 141063 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 141062 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 141003 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 141002 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 140943 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 140942 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 140883 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 140882 cttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 140823 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 140822 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 140763 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 140762 gttcgtccacggagggtgagtcagggcctaagatca 140727 Score = 864 bits (436), Expect = 0.0 Identities = 496/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 112415 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 112474 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 112475 gaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatggggg 112534 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112535 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 112594 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 112595 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 112654 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 112655 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 112714 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 112715 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 112774 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 112775 cttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 112834 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 112835 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 112894 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 112895 gttcgtccacggagggtgagtcagggcctaagatca 112930
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 864 bits (436), Expect = 0.0 Identities = 496/516 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 138844 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 138785 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 138784 gaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatggggg 138725 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138724 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 138665 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 138664 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 138605 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138604 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 138545 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 138544 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 138485 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||| Sbjct: 138484 cttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggctt 138425 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 138424 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 138365 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 138364 gttcgtccacggagggtgagtcagggcctaagatca 138329 Score = 864 bits (436), Expect = 0.0 Identities = 496/516 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 110455 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 110514 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 110515 gaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatggggg 110574 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110575 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 110634 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 110635 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 110694 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110695 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 110754 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 110755 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 110814 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||| Sbjct: 110815 cttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggctt 110874 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 110875 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 110934 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 110935 gttcgtccacggagggtgagtcagggcctaagatca 110970
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 862 bits (435), Expect = 0.0 Identities = 496/516 (96%), Gaps = 4/516 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 126998 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 126939 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 126938 gaatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacgatggggg 126883 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126882 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 126823 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 126822 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 126763 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 126762 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 126703 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126702 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 126643 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| ||||| |||| || || |||||||||||||||||||||||||||| Sbjct: 126642 cttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggctt 126583 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 126582 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 126523 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 126522 gttcgtccacggagggtgagtcagggcctaagatca 126487 Score = 862 bits (435), Expect = 0.0 Identities = 496/516 (96%), Gaps = 4/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107924 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107983 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107984 gaatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacgatggggg 108039 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108040 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 108099 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 108100 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 108159 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 108160 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 108219 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108220 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 108279 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| ||||| |||| || || |||||||||||||||||||||||||||| Sbjct: 108280 cttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggctt 108339 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 108340 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 108399 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 108400 gttcgtccacggagggtgagtcagggcctaagatca 108435
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 856 bits (432), Expect = 0.0 Identities = 495/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 130802 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 130743 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 130742 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 130683 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130682 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 130623 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 130622 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 130563 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 130562 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 130503 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 130502 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 130443 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 130442 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 130383 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 130382 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 130323 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 130322 gttcgtccacggagggtgagtcagggcctaagatca 130287 Score = 856 bits (432), Expect = 0.0 Identities = 495/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 103833 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 103892 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103893 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 103952 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103953 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 104012 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 104013 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 104072 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104073 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 104132 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 104133 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 104192 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 104193 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 104252 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 104253 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 104312 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 104313 gttcgtccacggagggtgagtcagggcctaagatca 104348
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 856 bits (432), Expect = 0.0 Identities = 496/516 (96%), Gaps = 1/516 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 133357 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 133298 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 133297 gaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatggggg 133239 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133238 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 133179 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| Sbjct: 133178 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgcc 133119 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133118 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 133059 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133058 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 132999 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| |||| || || |||||||||||||||||||||||||||| Sbjct: 132998 cttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggctt 132939 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 132938 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 132879 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 132878 gttcgtccacggagggtgagtcagggcctaagatca 132843 Score = 856 bits (432), Expect = 0.0 Identities = 496/516 (96%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104614 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 104673 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 104674 gaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatggggg 104732 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104733 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 104792 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| Sbjct: 104793 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgcc 104852 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104853 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 104912 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104913 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 104972 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| |||| || || |||||||||||||||||||||||||||| Sbjct: 104973 cttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggctt 105032 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 105033 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 105092 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 105093 gttcgtccacggagggtgagtcagggcctaagatca 105128
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 131910 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 131851 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131850 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 131791 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131790 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 131731 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 131730 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 131671 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131670 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 131611 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 131610 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 131551 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 131550 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 131491 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 131490 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 131431 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 131430 gttcgtccacggagggtgagtcagggcctaagatca 131395 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104968 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 105027 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105028 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 105087 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105088 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 105147 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 105148 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 105207 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105208 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 105267 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 105268 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 105327 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 105328 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 105387 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 105388 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 105447 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 105448 gttcgtccacggagggtgagtcagggcctaagatca 105483
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135036 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134977 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134976 gaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 134917 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134916 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134857 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134856 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134797 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134796 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134737 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134736 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 134677 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| | ||| ||| | || |||||||||||||||||||||||||||| Sbjct: 134676 cttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggctt 134617 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134616 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134557 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134556 gttcgtccacggagggtgagtcagggcctaagatca 134521 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106870 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106929 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106930 gaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 106989 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106990 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 107049 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107050 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107109 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107110 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107169 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107170 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 107229 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| | ||| ||| | || |||||||||||||||||||||||||||| Sbjct: 107230 cttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggctt 107289 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107290 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107349 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107350 gttcgtccacggagggtgagtcagggcctaagatca 107385
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135727 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 135668 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 135667 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 135608 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135607 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 135548 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135547 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 135488 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135487 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 135428 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 135427 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 135368 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 135367 cttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 135308 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135307 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 135248 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 135247 gttcgtccacggagggtgagtcagggcctaagatca 135212 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106698 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106757 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106758 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106817 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106818 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106877 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106878 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106937 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106938 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106997 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106998 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 107057 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 107058 cttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 107117 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107118 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107177 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107178 gttcgtccacggagggtgagtcagggcctaagatca 107213
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135315 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 135256 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135255 gaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 135196 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135195 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 135136 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135135 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 135076 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135075 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 135016 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135015 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 134956 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| | ||| ||| | || |||||||||||||||||||||||||||| Sbjct: 134955 cttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggctt 134896 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134895 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134836 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134835 gttcgtccacggagggtgagtcagggcctaagatca 134800 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107092 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107151 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107152 gaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 107211 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107212 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 107271 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107272 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107331 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107332 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107391 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107392 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 107451 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||||| | ||| ||| | || |||||||||||||||||||||||||||| Sbjct: 107452 cttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggctt 107511 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107512 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107571 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107572 gttcgtccacggagggtgagtcagggcctaagatca 107607
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 131903 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 131844 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131843 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 131784 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131783 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 131724 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 131723 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 131664 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131663 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 131604 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 131603 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 131544 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 131543 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 131484 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 131483 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 131424 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 131423 gttcgtccacggagggtgagtcagggcctaagatca 131388 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104966 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 105025 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105026 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 105085 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105086 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 105145 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 105146 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 105205 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105206 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 105265 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 105266 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 105325 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 105326 cttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggctt 105385 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 105386 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 105445 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 105446 gttcgtccacggagggtgagtcagggcctaagatca 105481
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 848 bits (428), Expect = 0.0 Identities = 494/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 866 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 925 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggg 985 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1045 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1046 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1105 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1106 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1165 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1166 ggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgc 1225 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||||||||| Sbjct: 1226 cttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgtcggctt 1285 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1286 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1345 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1346 gttcgtccacggagggtgagtcagggcctaagatca 1381
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 842 bits (425), Expect = 0.0 Identities = 497/521 (95%), Gaps = 5/521 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 138720 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 138661 Query: 61 gaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgat 115 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138660 gaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgat 138601 Query: 116 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138600 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 138541 Query: 176 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 235 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 138540 tgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaag 138481 Query: 236 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 295 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 138480 cagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatg 138421 Query: 296 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 355 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138420 aacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgt 138361 Query: 356 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 415 |||||||||||| |||||| ||||| ||| || || ||||||||||||||||||||||| Sbjct: 138360 tccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtc 138301 Query: 416 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 475 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 138300 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctcc 138241 Query: 476 gcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138240 gcaaggttcgtccacggagggtgagtcagggcctaagatca 138200 Score = 842 bits (425), Expect = 0.0 Identities = 497/521 (95%), Gaps = 5/521 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 111225 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 111284 Query: 61 gaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgat 115 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111285 gaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgat 111344 Query: 116 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111345 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 111404 Query: 176 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 235 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 111405 tgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaag 111464 Query: 236 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 295 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 111465 cagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatg 111524 Query: 296 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 355 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111525 aacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgt 111584 Query: 356 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 415 |||||||||||| |||||| ||||| ||| || || ||||||||||||||||||||||| Sbjct: 111585 tccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtc 111644 Query: 416 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 475 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 111645 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctcc 111704 Query: 476 gcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111705 gcaaggttcgtccacggagggtgagtcagggcctaagatca 111745 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 486 tccacggagggtgagtcagggcct 509 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 486 tccacggagggtgagtcagggcct 509 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135435 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 135376 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 135375 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 135316 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135315 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 135256 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135255 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 135196 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135195 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 135136 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 135135 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 135076 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 135075 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 135016 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135015 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134956 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134955 gttcgtccacggagggtgagtcagggcctaagatca 134920 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107195 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107254 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 107255 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 107314 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107315 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 107374 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107375 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107434 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107435 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107494 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 107495 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 107554 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 107555 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 107614 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107615 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107674 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107675 gttcgtccacggagggtgagtcagggcctaagatca 107710
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 136073 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 136014 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 136013 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 135954 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135953 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 135894 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135893 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 135834 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135833 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 135774 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 135773 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 135714 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||| || ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 135713 cttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 135654 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135653 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 135594 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 135593 gttcgtccacggagggtgagtcagggcctaagatca 135558 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107484 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107543 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 107544 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 107603 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107604 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 107663 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107664 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107723 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107724 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107783 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 107784 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 107843 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||| || ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 107844 cttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 107903 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107904 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107963 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107964 gttcgtccacggagggtgagtcagggcctaagatca 107999
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 142014 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 141955 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 141954 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 141895 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141894 ataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 141835 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141834 gctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcc 141775 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 141774 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 141715 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 141714 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 141655 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 141654 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 141595 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 141594 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 141535 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 141534 gttcgtccacggagggtgagtcagggcctaagatca 141499 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 111314 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 111373 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 111374 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 111433 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111434 ataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 111493 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111494 gctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcc 111553 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111554 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 111613 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 111614 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 111673 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 111674 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 111733 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 111734 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 111793 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 111794 gttcgtccacggagggtgagtcagggcctaagatca 111829
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2389 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 2448 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 2449 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 2508 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2509 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 2568 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2569 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 2628 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2629 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 2688 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 2689 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 2748 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 2749 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 2808 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 2809 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 2868 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 2869 gttcgtccacggagggtgagtcagggcctaagatca 2904
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134681 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134622 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 134621 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 134562 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134561 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134502 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134501 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134442 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134441 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134382 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134381 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134322 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134321 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134262 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134261 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134202 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134201 gttcgtccacggagggtgagtcagggcctaagatca 134166 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106355 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106414 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106415 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106474 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106475 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106534 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106535 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106594 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106595 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106654 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106655 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 106714 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 106715 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 106774 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106775 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 106834 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 106835 gttcgtccacggagggtgagtcagggcctaagatca 106870
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134816 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134757 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 134756 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 134697 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134696 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134637 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134636 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134577 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134576 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134517 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134516 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134457 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134456 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134397 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134396 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134337 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134336 gttcgtccacggagggtgagtcagggcctaagatca 134301 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106527 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106586 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106587 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106646 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106647 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106706 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106707 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106766 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106767 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106826 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106827 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 106886 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 106887 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 106946 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106947 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107006 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107007 gttcgtccacggagggtgagtcagggcctaagatca 107042
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134814 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134755 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 134754 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 134695 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134694 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134635 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134634 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134575 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134574 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134515 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134514 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134455 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134454 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134395 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134394 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134335 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134334 gttcgtccacggagggtgagtcagggcctaagatca 134299 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106524 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106583 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106584 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106643 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106644 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106703 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106704 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106763 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106764 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106823 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106824 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 106883 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 106884 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 106943 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106944 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107003 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107004 gttcgtccacggagggtgagtcagggcctaagatca 107039
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134726 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134667 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 134666 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 134607 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134606 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134547 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134546 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134487 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134486 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134427 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134426 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134367 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134366 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134307 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134306 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134247 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134246 gttcgtccacggagggtgagtcagggcctaagatca 134211 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106402 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106461 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106462 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106521 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106522 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106581 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106582 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106641 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106642 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106701 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106702 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 106761 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 106762 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 106821 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106822 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 106881 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 106882 gttcgtccacggagggtgagtcagggcctaagatca 106917
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135433 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 135374 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 135373 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 135314 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135313 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 135254 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135253 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 135194 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135193 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 135134 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 135133 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 135074 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 135073 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 135014 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135013 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134954 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134953 gttcgtccacggagggtgagtcagggcctaagatca 134918 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107193 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107252 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 107253 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 107312 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107313 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 107372 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107373 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107432 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107433 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107492 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 107493 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 107552 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 107553 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 107612 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107613 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107672 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107673 gttcgtccacggagggtgagtcagggcctaagatca 107708
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 135164 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 135105 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 135104 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 135045 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135044 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 134985 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134984 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134925 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134924 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134865 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134864 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134805 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134804 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134745 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134744 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134685 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134684 gttcgtccacggagggtgagtcagggcctaagatca 134649 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106974 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 107033 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 107034 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 107093 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107094 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 107153 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107154 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 107213 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107214 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 107273 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 107274 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 107333 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 107334 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 107393 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 107394 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 107453 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 107454 gttcgtccacggagggtgagtcagggcctaagatca 107489
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 841 bits (424), Expect = 0.0 Identities = 493/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 962 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 1021 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 1022 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 1081 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1082 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 1141 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1142 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1201 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1202 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1261 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1262 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 1321 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1322 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 1381 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1382 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1441 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 1442 gttcgtccacggagggtgagtcagggcctaagatca 1477
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 833 bits (420), Expect = 0.0 Identities = 492/516 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134693 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134634 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 134633 gaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 134574 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134573 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 134514 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134513 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 134454 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134453 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 134394 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 134393 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 134334 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 134333 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 134274 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 134273 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 134214 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 134213 gttcgtccacggagggtgagtcagggcctaagatca 134178 Score = 833 bits (420), Expect = 0.0 Identities = 492/516 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106369 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106428 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 106429 gaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 106488 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106548 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106549 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106608 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106609 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106668 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106669 ggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 106728 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 106729 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 106788 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106789 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 106848 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 106849 gttcgtccacggagggtgagtcagggcctaagatca 106884
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 825 bits (416), Expect = 0.0 Identities = 492/516 (95%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2635 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 2694 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 2695 gaatactagatatgactcaaaa-taacaggggtcaaggtcggctagtgagacgatggggg 2753 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2754 ataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgacc 2813 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2814 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 2873 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| Sbjct: 2874 acccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacgg 2933 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 2934 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 2993 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 2994 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggctt 3053 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 3054 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 3113 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 3114 gttcgtccacggagggtgagtcagggcctaagatca 3149
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 817 bits (412), Expect = 0.0 Identities = 490/516 (94%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 131002 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 130943 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130942 gaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggggg 130883 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130882 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 130823 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 130822 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 130763 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 130762 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 130703 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 130702 ggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgc 130643 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 130642 cttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 130583 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 130582 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 130523 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 130522 gttcgtccacggagggtgagtcagggcctaagatca 130487 Score = 817 bits (412), Expect = 0.0 Identities = 490/516 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104392 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 104451 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104452 gaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggggg 104511 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104512 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 104571 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 104572 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 104631 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104632 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 104691 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 104692 ggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgc 104751 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 104752 cttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 104811 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 104812 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 104871 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 104872 gttcgtccacggagggtgagtcagggcctaagatca 104907
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 809 bits (408), Expect = 0.0 Identities = 489/516 (94%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 129665 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 129606 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 129605 gaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgaggg 129546 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 129545 ataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgacc 129486 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 129485 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 129426 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129425 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 129366 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 129365 ggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgc 129306 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||| | ||| |||||||||||||||||||||||||||| Sbjct: 129305 cttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggctt 129246 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||| ||||||||||||||||||| |||||||| |||| |||||||||||| Sbjct: 129245 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctccgcaag 129186 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 129185 gttcgtccacggagggtgagtcagggcctaagatca 129150 Score = 809 bits (408), Expect = 0.0 Identities = 489/516 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 102791 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 102850 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 102851 gaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgaggg 102910 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102911 ataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgacc 102970 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 102971 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 103030 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103031 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 103090 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 103091 ggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgc 103150 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||||||||||| | ||||| ||| | ||| |||||||||||||||||||||||||||| Sbjct: 103151 cttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggctt 103210 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||| ||||||||||||||||||| |||||||| |||| |||||||||||| Sbjct: 103211 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctccgcaag 103270 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 103271 gttcgtccacggagggtgagtcagggcctaagatca 103306
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 807 bits (407), Expect = 0.0 Identities = 485/511 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 862 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 921 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 922 gaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatggggg 981 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1041 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 gctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcc 1101 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1102 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1161 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1162 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccgc 1221 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||| ||||||||||||||| ||| |||| |||||||||||||||| |||||| |||| Sbjct: 1222 cttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgtccgctt 1281 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||| |||||||| |||| | |||| |||||||||||| Sbjct: 1282 gagtaacgcaaacattggtgagaatctaatgcccccaaaaactaagggttcctccgcaag 1341 Query: 481 gttcgtccacggagggtgagtcagggcctaa 511 ||||||||||||||||||||||| ||||||| Sbjct: 1342 gttcgtccacggagggtgagtcaaggcctaa 1372
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 797 bits (402), Expect = 0.0 Identities = 488/516 (94%), Gaps = 8/516 (1%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134119 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 134060 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct: 134059 gaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatggggg 134007 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134006 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 133947 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 133946 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 133887 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133886 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 133827 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133826 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg- 133768 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||| ||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 133767 cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 133708 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 133707 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 133648 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 133647 gttcgtccacggagggtgagtcagggcctaagatca 133612 Score = 797 bits (402), Expect = 0.0 Identities = 488/516 (94%), Gaps = 8/516 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 106163 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 106222 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct: 106223 gaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatggggg 106275 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106276 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 106335 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106336 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 106395 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106396 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 106455 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106456 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg- 106514 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||||||||| ||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 106515 cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 106574 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 106575 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 106634 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 106635 gttcgtccacggagggtgagtcagggcctaagatca 106670
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 114 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 174 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 234 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 294 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 354 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 414 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 474 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 789 bits (398), Expect = 0.0 Identities = 398/398 (100%) Strand = Plus / Plus Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatca 398
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 779 bits (393), Expect = 0.0 Identities = 487/517 (94%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1360 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 1419 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 1479 Query: 121 -ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 1539 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 1540 cgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagc 1599 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1600 cacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacg 1659 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1660 gggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 1719 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 |||| |||||||| | ||| ||| | ||||||||||||||||||||||||||| Sbjct: 1720 tgttagggggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatgtcggct 1779 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1780 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 1839 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 1840 ggttcgtccacggagggtgagtcagggcctaagatca 1876
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 771 bits (389), Expect = 0.0 Identities = 486/517 (94%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 927 Query: 61 gaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggg 119 ||||||||||||||| || |||||||||||| | |||||| ||||||||||| ||||| Sbjct: 928 gaatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggg 987 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 988 gataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgac 1047 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1048 cgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagc 1107 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 1108 cacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacg 1167 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1168 ggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccg 1227 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 ||||||||||||||| | ||| ||| || || ||||||||||||||||||||||||||| Sbjct: 1228 ccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggct 1287 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1288 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 1347 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 1348 ggttcgtccacggagggtgagtcagggcctaagatca 1384
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 763 bits (385), Expect = 0.0 Identities = 486/517 (94%), Gaps = 2/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 882 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 941 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| Sbjct: 942 gaatactagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatggggg 1001 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 1002 ataagcttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatc 1061 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||| Sbjct: 1062 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc-tataagcagcc 1120 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1121 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1180 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1181 ggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgt 1240 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||||||||| Sbjct: 1241 cttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgtcggctt 1300 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1301 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1360 Query: 481 gttcgtccacgg-agggtgagtcagggcctaagatca 516 |||||||||||| |||||||||||||||||||||||| Sbjct: 1361 gttcgtccacggtagggtgagtcagggcctaagatca 1397
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 755 bits (381), Expect = 0.0 Identities = 481/511 (94%), Gaps = 5/511 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 326 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 385 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 386 gaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggg 445 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 446 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatc 505 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 506 gctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgcctagaagcagcc 564 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 565 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 624 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 625 ggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 684 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||| | | Sbjct: 685 cttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtc-acgt 743 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 744 gagt---gcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 800 Query: 481 gttcgtccacggagggtgagtcagggcctaa 511 ||||||||||||||||||||||||||||||| Sbjct: 801 gttcgtccacggagggtgagtcagggcctaa 831
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 751 bits (379), Expect = 0.0 Identities = 430/447 (96%) Strand = Plus / Minus Query: 70 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 129 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 130 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 189 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 190 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 249 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 250 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 310 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 370 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 429 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 430 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 221 Query: 490 cggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||| Sbjct: 220 cggagggtgagtcagggcctaagatca 194
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 749 bits (378), Expect = 0.0 Identities = 488/525 (92%), Gaps = 16/525 (3%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 139495 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 139436 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| || || |||| |||||||||||||||||||||||||||||| Sbjct: 139435 gaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggg 139383 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139382 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 139323 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 139322 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 139263 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139262 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 139203 Query: 301 ggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagc 353 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 139202 ggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagc 139143 Query: 354 gttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaa 411 ||||||||||||||||||||| ||||| ||| | | || ||||||||||||||||||| Sbjct: 139142 gttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaa 139083 Query: 412 tgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttc 471 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 139082 tgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttc 139023 Query: 472 ctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139022 ctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 138978 Score = 749 bits (378), Expect = 0.0 Identities = 488/525 (92%), Gaps = 16/525 (3%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 110565 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 110624 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| || || |||| |||||||||||||||||||||||||||||| Sbjct: 110625 gaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggg 110677 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110678 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 110737 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 110738 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 110797 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110798 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 110857 Query: 301 ggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagc 353 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 110858 ggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagc 110917 Query: 354 gttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaa 411 ||||||||||||||||||||| ||||| ||| | | || ||||||||||||||||||| Sbjct: 110918 gttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaa 110977 Query: 412 tgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttc 471 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 110978 tgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttc 111037 Query: 472 ctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111038 ctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 111082
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 747 bits (377), Expect = 0.0 Identities = 483/517 (93%), Gaps = 1/517 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117281 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 117222 Query: 61 gaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggg 119 ||||||||||||||| || |||||| ||||| || |||| ||||||||||| ||||| Sbjct: 117221 gaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggg 117162 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117161 gataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgac 117102 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 117101 cgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagc 117042 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 117041 cacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacg 116982 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 116981 ggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccg 116922 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 ||||||||||||||| | ||| ||| || || ||||||||||||||||||||||||||| Sbjct: 116921 ccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggct 116862 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 116861 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 116802 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 116801 ggttcgtccacggagggtgagtcagggcctaagatca 116765 Score = 747 bits (377), Expect = 0.0 Identities = 483/517 (93%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90821 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 90880 Query: 61 gaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggg 119 ||||||||||||||| || |||||| ||||| || |||| ||||||||||| ||||| Sbjct: 90881 gaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggg 90940 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90941 gataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgac 91000 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 91001 cgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagc 91060 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 91061 cacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacg 91120 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 91121 ggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccg 91180 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 ||||||||||||||| | ||| ||| || || ||||||||||||||||||||||||||| Sbjct: 91181 ccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggct 91240 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 91241 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 91300 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 91301 ggttcgtccacggagggtgagtcagggcctaagatca 91337
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 735 bits (371), Expect = 0.0 Identities = 371/371 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 548 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 608 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 668 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 728 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 788 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 848 Query: 361 cttagagggaa 371 ||||||||||| Sbjct: 849 cttagagggaa 859
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 731 bits (369), Expect = 0.0 Identities = 481/517 (93%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 927 Query: 61 gaatactagatatgacccaaaaataacaggggtcaagg-tcggccagtgagacgatgggg 119 ||||||||||||||| | |||||| |||| |||| || ||||||||||| ||||| Sbjct: 928 gaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggg 987 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 988 gataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgac 1047 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1048 cgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagc 1107 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 1108 cacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacg 1167 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 || ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1168 ggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccg 1227 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 |||||| |||||||| | ||| ||| || || ||||||||||||||||||||||||||| Sbjct: 1228 ccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggct 1287 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1288 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 1347 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 1348 ggttcgtccacggagggtgagtcagggcctaagatca 1384
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 718 bits (362), Expect = 0.0 Identities = 481/518 (92%), Gaps = 2/518 (0%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||||||| Sbjct: 51821 aggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactct 51762 Query: 61 gaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 119 |||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 51761 gaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggg 51702 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 51701 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgat 51642 Query: 180 cgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcag 238 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 51641 cgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcag 51582 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 |||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| |||||| Sbjct: 51581 ccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaac 51522 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 51521 ggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttcc 51462 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 ||||||||||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 51461 gccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 51402 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 51401 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgca 51342 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 51341 aggttcgtccacggagggtgagtcagggcctaagatca 51304 Score = 718 bits (362), Expect = 0.0 Identities = 481/518 (92%), Gaps = 2/518 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||||||| Sbjct: 38007 aggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactct 38066 Query: 61 gaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 119 |||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 38067 gaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggg 38126 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 38127 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgat 38186 Query: 180 cgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcag 238 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 38187 cgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcag 38246 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 |||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| |||||| Sbjct: 38247 ccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaac 38306 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 38307 ggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttcc 38366 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 ||||||||||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 38367 gccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 38426 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 38427 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgca 38486 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 38487 aggttcgtccacggagggtgagtcagggcctaagatca 38524
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 718 bits (362), Expect = 0.0 Identities = 481/518 (92%), Gaps = 2/518 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||||||| Sbjct: 4935 aggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactct 4994 Query: 61 gaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 119 |||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 4995 gaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggg 5054 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5055 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgat 5114 Query: 180 cgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcag 238 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 5115 cgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcag 5174 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 |||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| |||||| Sbjct: 5175 ccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaac 5234 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 5235 ggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttcc 5294 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 ||||||||||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 5295 gccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 5354 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 5355 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgca 5414 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 5415 aggttcgtccacggagggtgagtcagggcctaagatca 5452
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 710 bits (358), Expect = 0.0 Identities = 478/516 (92%), Gaps = 4/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 87131 aggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactct 87190 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| || ||| ||||| |||||| | |||| |||||||||||||||||| Sbjct: 87191 gaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatggggg 87246 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 87247 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 87306 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||| Sbjct: 87307 gctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagcc 87366 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 | |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 87367 aaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 87426 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87427 gactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgc 87486 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 || |||| |||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 87487 ctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 87546 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 87547 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 87606 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 87607 gttcgtccacggagggtgagtcagggcctaagatca 87642
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 710 bits (358), Expect = 0.0 Identities = 482/517 (93%), Gaps = 6/517 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 885 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 944 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 945 gaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatggggg 1004 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1064 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1065 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1124 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1125 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1184 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1185 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 1244 Query: 361 cttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcgagaatgtcgg 417 |||| | |||| || | |||||| |||| | |||||| ||| || | |||||||||| Sbjct: 1245 cttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaaccaagaatgtcgg 1304 Query: 418 cttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcctcc 475 ||||||||||| |||||| |||||||||||| ||||||||||||||| || | ||||||| Sbjct: 1305 cttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacctaaaggttcctcc 1364 Query: 476 gc-aaggttcgtccacggagggtgagtcagggcctaa 511 | |||||||||||||||||||||||||| ||||||| Sbjct: 1365 ccaaaggttcgtccacggagggtgagtcaaggcctaa 1401
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 706 bits (356), Expect = 0.0 Identities = 482/523 (92%), Gaps = 7/523 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||||||| Sbjct: 864 aggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactct 923 Query: 61 gaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 119 |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 924 gaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggg 983 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 984 gataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgat 1043 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 1044 cgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagc 1103 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| ||| |||||||||||||| ||||||||||||| ||||||| |||||| |||| Sbjct: 1104 cacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacg 1163 Query: 300 gggctaagcgatctgccgaagctgtgggatg------tcaaaatgcatcggtaggggagc 353 ||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 1164 gggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggggagc 1223 Query: 354 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 413 |||||||||||||||||||| | || ||| | ||| |||||| |||||||||||||| Sbjct: 1224 gttccgccttagagggaagcctctgcacgagcagcggtggacgaaacggaagcgagaatg 1283 Query: 414 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 473 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1284 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcct 1343 Query: 474 ccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1344 ccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1386
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 684 bits (345), Expect = 0.0 Identities = 477/518 (92%), Gaps = 6/518 (1%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 145691 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 145632 Query: 61 gaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacga 114 ||||||||| ||||| | |||| || |||||| ||| |||||| |||||||||||| Sbjct: 145631 gaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacgg 145572 Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 145571 tgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaa 145512 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 |||||||||||||| | |||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 145511 atgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaa 145452 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 145451 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaat 145392 Query: 295 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 354 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145391 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 145332 Query: 355 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 414 |||||||||||||||||||| | ||| ||| || || ||| |||||||||||||||||| Sbjct: 145331 ttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgt 145272 Query: 415 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 474 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 145271 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 145212 Query: 475 cgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||||||||||||||||||||| Sbjct: 145211 cgcaaggttcgtccacggagggtgagtcagggcctaag 145174 Score = 684 bits (345), Expect = 0.0 Identities = 477/518 (92%), Gaps = 6/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112771 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 112830 Query: 61 gaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacga 114 ||||||||| ||||| | |||| || |||||| ||| |||||| |||||||||||| Sbjct: 112831 gaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacgg 112890 Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 112891 tgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaa 112950 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 |||||||||||||| | |||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 112951 atgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaa 113010 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 113011 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaat 113070 Query: 295 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 354 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 113071 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 113130 Query: 355 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 414 |||||||||||||||||||| | ||| ||| || || ||| |||||||||||||||||| Sbjct: 113131 ttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgt 113190 Query: 415 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 474 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 113191 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 113250 Query: 475 cgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||||||||||||||||||||| Sbjct: 113251 cgcaaggttcgtccacggagggtgagtcagggcctaag 113288
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 676 bits (341), Expect = 0.0 Identities = 474/516 (91%), Gaps = 3/516 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 89217 aggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactct 89276 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| |||| || | || ||||| | |||| |||||||||||||||||| Sbjct: 89277 gaatactagatt--accccaataaaag-ggggtaagggtcaaccagtgagacgatggggg 89333 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 89334 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 89393 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||| Sbjct: 89394 gctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagcc 89453 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 | |||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 89454 aaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacgg 89513 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 89514 gactaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgc 89573 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 || ||||||||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 89574 ctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 89633 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 89634 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 89693 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 89694 gttcgtccacggagggtgagtcagggcctaagatca 89729
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 660 bits (333), Expect = 0.0 Identities = 472/517 (91%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 872 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 931 Query: 61 gaatactagatatgacccaaaaataacaggg-gtcaaggtcggccagtgagacgatgggg 119 ||||||| |||| ||| | ||||| || | || | |||| |||||||||| ||||| Sbjct: 932 gaatactggataggactccctaataatagagagtaagggtcaaccagtgagacagtgggg 991 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 992 gataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgac 1051 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1052 cgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagc 1111 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 || |||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| | Sbjct: 1112 catccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatg 1171 Query: 300 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1172 ggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccg 1231 Query: 360 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 419 |||||| | |||||| | ||| ||| || || ||||||||||||||||||||||||||| Sbjct: 1232 ccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggct 1291 Query: 420 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 479 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1292 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 1351 Query: 480 ggttcgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||||||| Sbjct: 1352 ggttcgtccacggagggtgagtcagggcctaagatca 1388
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 648 bits (327), Expect = 0.0 Identities = 396/419 (94%) Strand = Plus / Plus Query: 98 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 158 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 217 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 218 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 277 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 278 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 337 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 338 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 397 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 398 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 457 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 458 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5600 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| Sbjct: 5095 aggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactct 5154 Query: 61 gaatactagatat 73 ||||||||||||| Sbjct: 5155 gaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 648 bits (327), Expect = 0.0 Identities = 396/419 (94%) Strand = Plus / Minus Query: 98 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 158 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 217 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 218 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 277 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 278 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 337 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 338 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 397 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 398 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 457 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 458 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22383 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 22325 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| Sbjct: 22830 aggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactct 22771 Query: 61 gaatactagatat 73 ||||||||||||| Sbjct: 22770 gaatactagatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 648 bits (327), Expect = 0.0 Identities = 327/327 (100%) Strand = Plus / Plus Query: 190 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 250 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 310 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 370 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 430 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 490 cggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||| Sbjct: 301 cggagggtgagtcagggcctaagatca 327
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 642 bits (324), Expect = 0.0 Identities = 403/428 (94%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 90 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 148 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 149 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 208 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 209 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 268 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 269 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 328 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 329 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 388 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 389 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 448 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 449 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 508 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 509 taagatca 516 |||||||| Sbjct: 5865 taagatca 5872 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| Sbjct: 5363 aggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactct 5422 Query: 61 gaatactagatatgaccc 78 |||||||||||||||||| Sbjct: 5423 gaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 642 bits (324), Expect = 0.0 Identities = 403/428 (94%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 90 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 148 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 149 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 208 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 209 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 268 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 269 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 328 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 329 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 388 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 389 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 448 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 449 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 508 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 509 taagatca 516 |||||||| Sbjct: 5865 taagatca 5872 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| Sbjct: 5363 aggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactct 5422 Query: 61 gaatactagatatgaccc 78 |||||||||||||||||| Sbjct: 5423 gaatactagatatgaccc 5440
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 626 bits (316), Expect = e-176 Identities = 466/516 (90%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 127573 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 127514 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||| |||||||| || ||| ||| | |||| |||||||||||||||||| Sbjct: 127513 gaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggggg 127454 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 127453 ataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgact 127394 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 127393 gctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 127334 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct: 127333 acccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgg 127274 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 | ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 127273 gactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgt 127214 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 | ||| |||||| ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 127213 atcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggctt 127154 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 127153 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 127094 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 127093 gttcgtccacggagggtgagtcagggcctaagatca 127058 Score = 626 bits (316), Expect = e-176 Identities = 466/516 (90%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95874 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 95933 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||| |||||||| || ||| ||| | |||| |||||||||||||||||| Sbjct: 95934 gaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggggg 95993 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 95994 ataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgact 96053 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 96054 gctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 96113 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct: 96114 acccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgg 96173 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 | ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 96174 gactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgt 96233 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 | ||| |||||| ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 96234 atcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggctt 96293 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 96294 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 96353 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 96354 gttcgtccacggagggtgagtcagggcctaagatca 96389
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 618 bits (312), Expect = e-174 Identities = 393/420 (93%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5218 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5277 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4757 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 4816 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 4817 gaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 618 bits (312), Expect = e-174 Identities = 393/420 (93%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 926 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 927 gaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 618 bits (312), Expect = e-174 Identities = 393/420 (93%) Strand = Plus / Minus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149917 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 149858 Score = 618 bits (312), Expect = e-174 Identities = 393/420 (93%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118808 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 150378 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 150319 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 150318 gaatactaggtatg 150305 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118288 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 118347 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 118348 gaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 618 bits (312), Expect = e-174 Identities = 393/420 (93%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 926 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 927 gaatactaggtatg 940
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 617 bits (311), Expect = e-173 Identities = 468/514 (91%), Gaps = 6/514 (1%) Strand = Plus / Plus Query: 3 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 62 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 887 gggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctga 946 Query: 63 atactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggat 122 |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 947 atactaaatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggat 1006 Query: 123 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 aagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 1066 Query: 183 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 242 ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||| Sbjct: 1067 tcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagcagccac 1126 Query: 243 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 302 |||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 1127 ccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacgggg 1186 Query: 303 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 362 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1187 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccccct 1246 Query: 363 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 422 || ||||||||| |||| ||| |||| |||||| | | | | | |||||| ||||| Sbjct: 1247 tatagggaagcacccgccccagcaagggtggacgaaaccg-atctaaaatgtccccttga 1305 Query: 423 gtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcctccgc-aag 480 |||| ||||| ||||||||||||||||||||| |||||| |||| ||||||| | ||| Sbjct: 1306 gtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagggttcctccccaaag 1365 Query: 481 gttcgtccacgga--gggtgagtc-agggcctaa 511 ||||||||||||| ||||||||| ||||||||| Sbjct: 1366 gttcgtccacggatggggtgagtcaagggcctaa 1399
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 611 bits (308), Expect = e-171 Identities = 375/396 (94%), Gaps = 1/396 (0%) Strand = Plus / Plus Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 480 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 481 gttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatca 651
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 601 bits (303), Expect = e-169 Identities = 345/359 (96%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 130926 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 130867 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130866 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 130807 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130806 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 130747 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 130746 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 130687 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 130686 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 130627 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 130626 ggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 601 bits (303), Expect = e-169 Identities = 345/359 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 102519 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 102578 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 102579 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 102638 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102639 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 102698 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 102699 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 102758 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102759 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 102818 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 359 ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 102819 ggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 222 bits (112), Expect = 9e-55 Identities = 121/124 (97%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 513 atca 516 |||| Sbjct: 130414 atca 130411 Score = 222 bits (112), Expect = 9e-55 Identities = 121/124 (97%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 513 atca 516 |||| Sbjct: 103031 atca 103034
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 593 bits (299), Expect = e-166 Identities = 353/371 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 873 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 932 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 933 gaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacaatggggg 992 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1052 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||| ||||||||||||| |||||||| ||||||||| |||||||||||| |||||||| Sbjct: 1053 gctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgcctataagcagcc 1112 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1113 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacgg 1172 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1173 ggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttcccc 1232 Query: 361 cttagagggaa 371 ||||||||||| Sbjct: 1233 cttagagggaa 1243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 417 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 475 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 476 gc-aaggttcgtccacggagggt 497 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 593 bits (299), Expect = e-166 Identities = 461/511 (90%), Gaps = 3/511 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 884 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 943 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 944 gaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagaccatggggg 1003 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 ataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1063 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 1064 gctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagcagcc 1123 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||| ||||| ||||||| || |||||||| Sbjct: 1124 acccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacgg 1183 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | Sbjct: 1184 ggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcccc 1243 Query: 361 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 420 |||| |||||| || || | | | |||| ||| || ||||| | |||||||| || | Sbjct: 1244 cttaaagggaaacaccccccccaacatgggtggaccaaacggaaaccagaatgtccgcct 1303 Query: 421 gagtaacgaaaacattggtgagaatccaatgccccg-aaaacccaaggtttcctccgcaa 479 ||||||| ||||||||||||||||| |||||||| |||| | || | ||||||| ||| Sbjct: 1304 tagtaacgcaaacattggtgagaatctaatgccccccaaaaactaaaggttcctccccaa 1363 Query: 480 -ggttcgtccacgga-gggtgagtcagggcc 508 ||||||||||| || |||||||||| |||| Sbjct: 1364 aggttcgtccaccgaggggtgagtcaaggcc 1394
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 591 bits (298), Expect = e-166 Identities = 355/374 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 871 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 930 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 931 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 990 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 ataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1050 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| Sbjct: 1051 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagcagcc 1110 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1111 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1170 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1171 ggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgt 1230 Query: 361 cttagagggaagca 374 |||| |||||||| Sbjct: 1231 gttagggggaagca 1244
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 587 bits (296), Expect = e-164 Identities = 390/420 (92%), Gaps = 1/420 (0%) Strand = Plus / Minus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114887 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 114828 Score = 587 bits (296), Expect = e-164 Identities = 390/420 (92%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87233 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 87292 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 115343 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 115284 Query: 61 gaatactag 69 ||||||||| Sbjct: 115283 gaatactag 115275 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86777 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 86836 Query: 61 gaatactag 69 ||||||||| Sbjct: 86837 gaatactag 86845
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 583 bits (294), Expect = e-163 Identities = 384/414 (92%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145259 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatca 145312 Score = 583 bits (294), Expect = e-163 Identities = 384/414 (92%) Strand = Plus / Minus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 87592 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatca 87539 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 144790 aggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 144849 Query: 61 gaatactagat 71 ||||||||||| Sbjct: 144850 gaatactagat 144860 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 88061 aggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 88002 Query: 61 gaatactagat 71 ||||||||||| Sbjct: 88001 gaatactagat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 583 bits (294), Expect = e-163 Identities = 384/414 (92%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 taagggttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatca 1368 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 854 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 913 Query: 61 gaatactagata 72 ||||||| |||| Sbjct: 914 gaatactggata 925
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 581 bits (293), Expect = e-163 Identities = 299/301 (99%) Strand = Plus / Minus Query: 216 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 276 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 336 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 396 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 456 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 515 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 516 a 516 | Sbjct: 20570 a 20570
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 579 bits (292), Expect = e-162 Identities = 465/520 (89%), Gaps = 7/520 (1%) Strand = Plus / Minus Query: 4 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 63 |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 138397 ggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaa 138338 Query: 64 tactagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatggggga 121 |||| | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||| Sbjct: 138337 tactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtggggga 138278 Query: 122 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 181 ||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 138277 taagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccg 138218 Query: 182 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 241 ||||||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||| Sbjct: 138217 ctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagcca 138158 Query: 242 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 301 ||||| |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| Sbjct: 138157 cccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacggg 138098 Query: 302 gctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccg 359 ||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 138097 actaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccg 138038 Query: 360 cct---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 416 ||| |||||||||| | ||| ||| || | |||||||||||||||||| ||||| Sbjct: 138037 cctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcg 137978 Query: 417 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 476 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 137977 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccg 137918 Query: 477 caaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||| Sbjct: 137917 caaggttcgtccacggagggtgagtcagggcctaagatca 137878 Score = 579 bits (292), Expect = e-162 Identities = 465/520 (89%), Gaps = 7/520 (1%) Strand = Plus / Plus Query: 4 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 63 |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 83480 ggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaa 83539 Query: 64 tactagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatggggga 121 |||| | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||| Sbjct: 83540 tactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtggggga 83599 Query: 122 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 181 ||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 83600 taagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccg 83659 Query: 182 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 241 ||||||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||| Sbjct: 83660 ctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagcca 83719 Query: 242 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 301 ||||| |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| Sbjct: 83720 cccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacggg 83779 Query: 302 gctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccg 359 ||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 83780 actaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccg 83839 Query: 360 cct---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 416 ||| |||||||||| | ||| ||| || | |||||||||||||||||| ||||| Sbjct: 83840 cctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcg 83899 Query: 417 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 476 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 83900 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccg 83959 Query: 477 caaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||| Sbjct: 83960 caaggttcgtccacggagggtgagtcagggcctaagatca 83999
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 579 bits (292), Expect = e-162 Identities = 359/380 (94%), Gaps = 1/380 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 846 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 905 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 906 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 965 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1025 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1026 gcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1085 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1086 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1145 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta-ggggagcgttccg 359 ||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||||| Sbjct: 1146 ggctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgtatgggaagcgttccg 1205 Query: 360 ccttagagggaagcaaccgc 379 |||| |||||||| |||| Sbjct: 1206 tgttagggggaagcatccgc 1225
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 555 bits (280), Expect = e-155 Identities = 280/280 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 729 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 789 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 849 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 909 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcc 280 |||||||||||||||||||||||||||||||||||||||| Sbjct: 910 accctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 551 bits (278), Expect = e-154 Identities = 302/310 (97%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122341 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactct 122282 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 122281 gaatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggg 122222 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122221 ataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgacc 122162 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122161 gctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 122102 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122101 accctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacgg 122042 Query: 301 ggctaagcga 310 |||||||||| Sbjct: 122041 ggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 551 bits (278), Expect = e-154 Identities = 302/310 (97%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12824882 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactct 12824823 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 12824822 gaatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggg 12824763 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12824762 ataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgacc 12824703 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824702 gctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 12824643 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12824642 accctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacgg 12824583 Query: 301 ggctaagcga 310 |||||||||| Sbjct: 12824582 ggctaagcga 12824573 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 468 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagat 2412086
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 543 bits (274), Expect = e-151 Identities = 351/377 (93%), Gaps = 6/377 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 885 aggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactct 944 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| | |||||||| ||||||||||| |||||||||||||| Sbjct: 945 gaatactagatatgacc------tcacaggggttaaggtcggccaatgagacgatggggg 998 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 ataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1058 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 1059 gctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagcagcc 1118 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 1119 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacgg 1178 Query: 301 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 360 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1179 ggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 1238 Query: 361 cttagagggaagcaacc 377 | || |||||| ||||| Sbjct: 1239 cctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 430 aaacattggtgagaatccaatgccccgaaaa 460 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 539 bits (272), Expect = e-150 Identities = 380/415 (91%), Gaps = 2/415 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 339 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 1367 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 927 Query: 61 gaatactag 69 ||||||||| Sbjct: 928 gaatactag 936
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 537 bits (271), Expect = e-149 Identities = 385/422 (91%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 334 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 335 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 394 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 395 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 454 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 455 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1306 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1365 Query: 515 ca 516 || Sbjct: 1366 ca 1367 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 926 Query: 61 gaatactag 69 ||||||||| Sbjct: 927 gaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 537 bits (271), Expect = e-149 Identities = 385/422 (91%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 334 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 335 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 394 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 395 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 454 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 455 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1319 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1378 Query: 515 ca 516 || Sbjct: 1379 ca 1380 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 880 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 939 Query: 61 gaatactag 69 ||||||||| Sbjct: 940 gaatactag 948
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 537 bits (271), Expect = e-149 Identities = 271/271 (100%) Strand = Plus / Plus Query: 246 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 306 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 366 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 426 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 486 tccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatca 271
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 537 bits (271), Expect = e-149 Identities = 333/351 (94%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 177708 aggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 177767 Query: 61 gaatactagatatgacccaaaaataacaggggt-caaggtcggccagtgagacgatgggg 119 ||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||| Sbjct: 177768 gaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggg 177827 Query: 120 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 177828 gataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgac 177887 Query: 180 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 239 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 177888 cgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagc 177947 Query: 240 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 299 ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177948 cacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacg 178007 Query: 300 gggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 349 |||||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178008 gggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 211 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 211 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 aggcccctaaatgaccgctcag 186 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gtcgagagggaaacagcccggatc 156 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gtcgagagggaaacagcccggatc 156 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 533 bits (269), Expect = e-148 Identities = 319/333 (95%), Gaps = 2/333 (0%) Strand = Plus / Plus Query: 184 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 243 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 244 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 303 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 304 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 363 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 364 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 423 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 424 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 483 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 484 cgtccacggagggtgagtcagggcctaagatca 516 ||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatca 331
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 529 bits (267), Expect = e-147 Identities = 384/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 334 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 335 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 394 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 395 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 454 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 455 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1423 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1482 Query: 515 ca 516 || Sbjct: 1483 ca 1484 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 984 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 1043 Query: 61 gaatactag 69 ||||||||| Sbjct: 1044 gaatactag 1052
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 525 bits (265), Expect = e-146 Identities = 383/421 (90%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 97 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 156 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 157 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 216 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 217 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 276 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 277 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 336 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 337 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 396 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 457 aaaacccaaggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatc 515 |||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 5242 aaaacctaagggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatc 5183 Query: 516 a 516 | Sbjct: 5182 a 5182 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||| ||| | | |||||||| | ||||||||||||| | Sbjct: 5680 aggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactat 5621 Query: 61 gaatactagatatg 74 |||||||||||||| Sbjct: 5620 gaatactagatatg 5607
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 523 bits (264), Expect = e-145 Identities = 376/413 (91%), Gaps = 4/413 (0%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 339 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1272 acccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1324 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 823 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 882 Query: 61 gaatactagatatg 74 ||||||||| |||| Sbjct: 883 gaatactaggtatg 896
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 523 bits (264), Expect = e-145 Identities = 378/415 (91%), Gaps = 2/415 (0%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 339 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123952 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 123898 Score = 523 bits (264), Expect = e-145 Identities = 378/415 (91%), Gaps = 2/415 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 339 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 95968 Score = 113 bits (57), Expect = 6e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 124397 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactct 124338 Query: 61 gaatactag 69 ||||||||| Sbjct: 124337 gaatactag 124329 Score = 113 bits (57), Expect = 6e-22 Identities = 66/69 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 95469 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactct 95528 Query: 61 gaatactag 69 ||||||||| Sbjct: 95529 gaatactag 95537
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 515 bits (260), Expect = e-143 Identities = 312/330 (94%), Gaps = 7/330 (2%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 350 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 409 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| || || |||| |||||||||||||||||||||||||||||| Sbjct: 410 gaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggg 462 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 522 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 523 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 582 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 583 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 642 Query: 301 ggctaagcgatctgccgaagctgtgggatg 330 |||||||||||||||||||||||||||||| Sbjct: 643 ggctaagcgatctgccgaagctgtgggatg 672
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 511 bits (258), Expect = e-142 Identities = 261/262 (99%) Strand = Plus / Plus Query: 255 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 315 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 375 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 435 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 495 ggtgagtcagggcctaagatca 516 |||||||||||||||| ||||| Sbjct: 241 ggtgagtcagggcctaggatca 262
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 504 bits (254), Expect = e-139 Identities = 371/410 (90%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5364 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5365 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 5414 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 4917 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 4976 Query: 61 gaatact 67 ||||||| Sbjct: 4977 gaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 504 bits (254), Expect = e-139 Identities = 371/410 (90%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 1381 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 884 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 943 Query: 61 gaatact 67 ||||||| Sbjct: 944 gaatact 950
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 500 bits (252), Expect = e-138 Identities = 375/416 (90%), Gaps = 5/416 (1%) Strand = Plus / Plus Query: 101 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 160 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 161 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 220 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 221 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 281 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 340 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 341 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 400 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 401 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 460 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 461 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 || |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1355 cctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatca 1410 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||| || |||||||||||||| |||||||||| | Sbjct: 882 aggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactat 941 Query: 61 gaatactagatatgac 76 |||||||||||||||| Sbjct: 942 gaatactagatatgac 957
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 496 bits (250), Expect = e-137 Identities = 370/410 (90%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 1381 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 884 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 943 Query: 61 gaatact 67 ||||||| Sbjct: 944 gaatact 950
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 492 bits (248), Expect = e-136 Identities = 404/456 (88%) Strand = Plus / Minus Query: 5 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 64 |||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||| Sbjct: 2952 gtaaagcactgtttcggtgcgggcaatgagagcagtaccaaattgaggcaaactctgaat 2893 Query: 65 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 124 | |||||| || | ||||| ||| |||||||||||||| |||||||||| | ||||||| Sbjct: 2892 attagatacgatctcaaaatcacaagggtcaaggtcggcgagtgagacgacgagggataa 2833 Query: 125 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 184 ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| Sbjct: 2832 gcttcatcgtcgagagggaaacaacctggatcaccagctaaggcccctaaatgactgctc 2773 Query: 185 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2772 agtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcaaccaccc 2713 Query: 245 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 304 || ||| |||||||||||||||||| ||||||||| ||||| | |||||||| ||||| Sbjct: 2712 ttgaaaaagtgcgtaatagctcactaatcgagcgcacttgcaccaaagatgaattgggct 2653 Query: 305 aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 364 |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 2652 aagcgatctgttgaagctatgggatgtcaaaatgcatcgataggggagcgttccgcctta 2593 Query: 365 gagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagt 424 |||||||||| | || || | ||| || || ||||||||| |||||||||||| | Sbjct: 2592 gagggaagcacctgcacgagtagtggtggaagaggcggaagcgggaatgtcggctttttt 2533 Query: 425 aacgaaaacattggtgagaatccaatgccccgaaaa 460 || | ||||||||||||||||||||||||| ||||| Sbjct: 2532 aaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 469 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 |||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagat 2437
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 488 bits (246), Expect = e-134 Identities = 298/316 (94%), Gaps = 7/316 (2%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 366 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 425 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||| || || |||| |||||||||||||||||||||||||||||| Sbjct: 426 gaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggg 478 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 538 Query: 181 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 240 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 539 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 598 Query: 241 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 300 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 599 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 658 Query: 301 ggctaagcgatctgcc 316 |||||||||||||||| Sbjct: 659 ggctaagcgatctgcc 674
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 488 bits (246), Expect = e-134 Identities = 369/410 (90%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaaccta 1326 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1327 agggttcctccgcaaggttcgtccacggagggttagtcagggcctaagat 1376 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 879 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactct 938 Query: 61 gaatactagata 72 ||||||| |||| Sbjct: 939 gaatactggata 950
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 444 bits (224), Expect = e-121 Identities = 361/406 (88%), Gaps = 3/406 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 338 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcag 504 ||||||||| ||||| || ||||||||||| || |||||||||||| Sbjct: 1275 aacccaaggattcctacggaaggttcgtccgcgtagggtgagtcag 1320 Score = 93.7 bits (47), Expect = 5e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | | ||||||||||| || ||||||||| Sbjct: 830 aggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactct 889 Query: 61 gaatactagatatga 75 |||||||| |||||| Sbjct: 890 gaatactaaatatga 904
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 844 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 903 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 904 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 963 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 964 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1023 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1024 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1083 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1084 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1143 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1144 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1198 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1199 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1258 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1259 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1318 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1319 aggttcatccacgtagggtgagtcaggtcgtaagatca 1356
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 844 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 903 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 904 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 963 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 964 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1023 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1024 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1083 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1084 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1143 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1144 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1198 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1199 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1258 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1259 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1318 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1319 aggttcatccacgtagggtgagtcaggtcgtaagatca 1356
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 844 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 903 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 904 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 963 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 964 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1023 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1024 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1083 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1084 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1143 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1144 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1198 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1199 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1258 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1259 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1318 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1319 aggttcatccacgtagggtgagtcaggtcgtaagatca 1356
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 442 bits (223), Expect = e-121 Identities = 445/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaaggag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 438 bits (221), Expect = e-120 Identities = 365/413 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 | |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4345 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 4397 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 3902 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactct 3961 Query: 61 gaatactagatatg 74 |||||||| ||||| Sbjct: 3962 gaatactaaatatg 3975
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 438 bits (221), Expect = e-120 Identities = 251/261 (96%) Strand = Plus / Plus Query: 256 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 315 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 316 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 375 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 376 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 435 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 436 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 495 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 496 gtgagtcagggcctaagatca 516 ||||||||||||||||||||| Sbjct: 995 gtgagtcagggcctaagatca 1015
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 444/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| | Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagagg 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 444/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| | ||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 444/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| || | |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 444/518 (85%), Gaps = 7/518 (1%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| | Sbjct: 845 aggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactat 904 Query: 61 gaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| ||||| Sbjct: 905 gaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatggg 964 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| Sbjct: 965 ggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatga 1024 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 || || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1025 ccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaag 1084 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||| ||||||||||||||||||||| |||||||||| || |||| || ||| |||||| Sbjct: 1085 ccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaac 1144 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| || || ||| ||||||| ||||||||| | |||||| |||||||||||| Sbjct: 1145 gggaataggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttct 1199 Query: 359 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 418 |||||| | ||||||| | || || | ||| || ||||| |||| |||||||||||| Sbjct: 1200 gccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatgtcggc 1259 Query: 419 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 478 |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct: 1260 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcaca 1319 Query: 479 aggttcgtccacggagggtgagtcagggcctaagatca 516 |||||| |||||| ||||||||||||| | |||||||| Sbjct: 1320 aggttcatccacgtagggtgagtcaggtcgtaagatca 1357
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 430 bits (217), Expect = e-117 Identities = 365/413 (88%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 | |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 1362 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactct 927 Query: 61 gaatactagatatg 74 |||||||| ||||| Sbjct: 928 gaatactaaatatg 941
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 422 bits (213), Expect = e-115 Identities = 364/414 (87%), Gaps = 4/414 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 338 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1312 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1365 Score = 123 bits (62), Expect = 6e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactct 926 Query: 61 gaatactaga 70 |||||||||| Sbjct: 927 gaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 422 bits (213), Expect = e-115 Identities = 364/414 (87%), Gaps = 4/414 (0%) Strand = Plus / Minus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 338 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 114350 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 114297 Score = 422 bits (213), Expect = e-115 Identities = 364/414 (87%), Gaps = 4/414 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 338 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 87638 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 87691 Score = 123 bits (62), Expect = 6e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 114795 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactct 114736 Query: 61 gaatactaga 70 |||||||||| Sbjct: 114735 gaatactaga 114726 Score = 123 bits (62), Expect = 6e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 87193 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactct 87252 Query: 61 gaatactaga 70 |||||||||| Sbjct: 87253 gaatactaga 87262
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 422 bits (213), Expect = e-115 Identities = 363/413 (87%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 | |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 1363 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactct 927 Query: 61 gaatactagatatg 74 |||||||| ||||| Sbjct: 928 gaatactaaatatg 941
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 412 bits (208), Expect = e-112 Identities = 327/366 (89%), Gaps = 8/366 (2%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||| |||| ||| |||| ||||||||| |||||||||| | Sbjct: 869 aggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactat 928 Query: 61 gaatactagatatgacc--caaaaataacaggggtcaaggtcggccagtgagacgatggg 118 ||||||||||||||||| |||||||||||||| | ||||| | |||||||||| ||||| Sbjct: 929 gaatactagatatgacctccaaaaataacagggataaaggtggaccagtgagaccatggg 988 Query: 119 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 178 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 989 ggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatga 1048 Query: 179 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 238 ||||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1049 ccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgcctagaagaag 1108 Query: 239 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 298 ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||| Sbjct: 1109 ccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaatatgaat 1168 Query: 299 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 358 ||| ||||||| | |||||||||||||||||| | |||||||||||||||||| Sbjct: 1169 gggaataagcgacccgccgaagctgtgggatgtaa------atcggtaggggagcgttct 1222 Query: 359 gcctta 364 |||||| Sbjct: 1223 gcctta 1228 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 396 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 455 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 456 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 515 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 516 a 516 | Sbjct: 1390 a 1390
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 400 bits (202), Expect = e-108 Identities = 358/410 (87%), Gaps = 5/410 (1%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||||| | ||||||||||| |||||||||||||||| |||||| Sbjct: 2860 taaggtttcctctggaaggttcgtccgcggagggtgagtcaggacctaag 2909 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 2425 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 2484 Query: 62 aatact 67 |||||| Sbjct: 2485 aatact 2490
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 398 bits (201), Expect = e-108 Identities = 204/205 (99%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 839 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 899 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 959 Query: 181 gctcagtgataaaggaggtgggggt 205 ||||||||||||||||||| ||||| Sbjct: 960 gctcagtgataaaggaggtaggggt 984
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 365 bits (184), Expect = 9e-98 Identities = 184/184 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 724 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 784 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 844 Query: 181 gctc 184 |||| Sbjct: 845 gctc 848
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 67 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 126 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 127 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 186 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 187 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 246 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 247 taaagagtgcgtaatagctca 267 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 67 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 126 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 127 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 186 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 187 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 246 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 247 taaagagtgcgtaatagctca 267 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 123 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 182 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 183 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 242 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 243 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 303 ctaagcgatctgccgaagctgtgggatgtcaaaat 337 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 123 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 182 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 183 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 242 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 243 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 303 ctaagcgatctgccgaagctgtgggatgtcaaaat 337 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 355 bits (179), Expect = 9e-95 Identities = 353/410 (86%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||| |||||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 190230 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaag 190279 Score = 355 bits (179), Expect = 9e-95 Identities = 353/410 (86%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||| |||||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 151657 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaag 151706 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 189792 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 189851 Query: 62 aatac 66 ||||| Sbjct: 189852 aatac 189856 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 151219 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 151278 Query: 62 aatac 66 ||||| Sbjct: 151279 aatac 151283
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 347 bits (175), Expect = 2e-92 Identities = 354/411 (86%), Gaps = 2/411 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 283 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| Sbjct: 1301 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaag 1351 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 61 gaatact 67 ||||||| Sbjct: 917 gaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 347 bits (175), Expect = 2e-92 Identities = 354/411 (86%), Gaps = 2/411 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 283 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| Sbjct: 1314 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaag 1364 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 61 gaatact 67 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 347 bits (175), Expect = 2e-92 Identities = 354/411 (86%), Gaps = 2/411 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 283 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 341 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| Sbjct: 5888 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaag 5938 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 61 gaatact 67 ||||||| Sbjct: 5504 gaatact 5510
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 343 bits (173), Expect = 3e-91 Identities = 350/408 (85%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 189308 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 189309 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaag 189356 Score = 343 bits (173), Expect = 3e-91 Identities = 350/408 (85%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 150865 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 150866 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaag 150913 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 188868 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 188927 Query: 61 gaatacta 68 |||||||| Sbjct: 188928 gaatacta 188935 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 150425 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 150484 Query: 61 gaatacta 68 |||||||| Sbjct: 150485 gaatacta 150492
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 337 bits (170), Expect = 2e-89 Identities = 170/170 (100%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 932 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 992 Query: 121 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 170 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 130 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 189 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 190 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 249 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 250 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 309 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 310 atctgccgaagctgtgggat 329 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 192 bits (97), Expect = 8e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatca 1777 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1271 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 1330 Query: 61 gaatactagatatga 75 |||||||||| |||| Sbjct: 1331 gaatactagacatga 1345
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 311 bits (157), Expect = 1e-81 Identities = 346/408 (84%), Gaps = 2/408 (0%) Strand = Plus / Minus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||||||| |||| |||||| |||||||||||||||| |||||| Sbjct: 17734 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaag 17687 Score = 311 bits (157), Expect = 1e-81 Identities = 346/408 (84%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 344 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 345 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 404 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 405 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 464 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 465 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||||||| |||| |||||| |||||||||||||||| |||||| Sbjct: 3132 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaag 3179 Score = 97.6 bits (49), Expect = 3e-17 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 59 ||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||| Sbjct: 18177 aggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaactc 18118 Query: 60 tgaatacta 68 ||||||||| Sbjct: 18117 tgaatacta 18109 Score = 97.6 bits (49), Expect = 3e-17 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 59 ||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||| Sbjct: 2689 aggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaactc 2748 Query: 60 tgaatacta 68 ||||||||| Sbjct: 2749 tgaatacta 2757
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 297 bits (150), Expect = 2e-77 Identities = 367/438 (83%), Gaps = 6/438 (1%) Strand = Plus / Plus Query: 79 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 138 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 139 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 198 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 199 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 258 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 259 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 318 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 319 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 378 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 379 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 438 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 439 tgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtg 498 ||||||||||| |||| |||||| |||| ||||| | |||||||| |||||| |||||| Sbjct: 1298 cgagaatccaattccccaaaaacctaagggttccttcacaaggttcatccacgtagggtg 1357 Query: 499 agtcagggcctaagatca 516 ||||||| |||||||||| Sbjct: 1358 agtcaggtcctaagatca 1375 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||| ||||| |||||||| || |||||||||||||| |||||| ||| | Sbjct: 857 aggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactat 916 Query: 61 gaatactagatatgac 76 |||||||||||||||| Sbjct: 917 gaatactagatatgac 932
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 143 bits (72), Expect = 6e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaag 1414 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 881 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 940 Query: 61 gaatactaga 70 |||||||||| Sbjct: 941 gaatactaga 950 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccgc 360 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 281 bits (142), Expect = 1e-72 Identities = 349/414 (84%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 161 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 282 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 340 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 341 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 400 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 401 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 460 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 461 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 || |||| ||||| || |||| ||||||||| |||||||||||||||||||||| Sbjct: 1312 cctaagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagat 1365 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactct 926 Query: 61 gaatactag 69 ||||||||| Sbjct: 927 gaatactag 935
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 99 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 158 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 159 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 218 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 219 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 278 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 279 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 338 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 339 catcggtaggggagcgttccgc 360 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 867 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 926 Query: 61 gaatact 67 ||||||| Sbjct: 927 gaatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaag 983 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 62 aatac 66 ||||| Sbjct: 550 aatac 554
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 200 bits (101), Expect = 3e-48 Identities = 155/173 (89%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 399 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1582 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1018 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 1077 Query: 61 gaatactagat 71 ||||||||||| Sbjct: 1078 gaatactagat 1088
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 182 bits (92), Expect = 8e-43 Identities = 113/120 (94%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 933 Query: 61 gaatactag 69 ||||||||| Sbjct: 934 gaatactag 942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccgc 360 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 216 bits (109), Expect = 5e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 342 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 401 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagat 1364 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| Sbjct: 863 aggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaactct 922 Query: 61 gaatactagata 72 |||||||||||| Sbjct: 923 gaatactagata 934
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 256 bits (129), Expect = 6e-65 Identities = 340/408 (83%), Gaps = 3/408 (0%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 343 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| | ||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgttta--tgcatcg 2877 Query: 344 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 403 |||||||||||||| || ||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctgc-ttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 404 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 463 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacct 2996 Query: 464 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 511 |||| |||||| | |||| ||||||||||||||| ||||||| ||||| Sbjct: 2997 aaggattcctctggaaggctcgtccacggagggttagtcaggacctaa 3044 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 2558 aggggtaaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaa 2617 Query: 61 gaatacta 68 |||||||| Sbjct: 2618 gaatacta 2625
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 340 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 341 tcggtaggggagcgttccg 359 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 109 bits (55), Expect = 9e-21 Identities = 101/115 (87%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 458 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaaga 1366 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||| Sbjct: 872 aggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactcc 931 Query: 61 gaatactaga 70 |||||||||| Sbjct: 932 gaatactaga 941
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 324 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 324 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaaga 170124 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Plus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaaga 122802 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 61 gaatact 67 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 61 gaatact 67 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 341 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 342 cggtaggggagcgttccg 359 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 123 bits (62), Expect = 6e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 407 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 466 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 467 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||||||| |||||||||| |||||||| |||| || |||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaag 3060 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 62 aatac 66 ||||| Sbjct: 2630 aatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 324 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Plus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaaga 1393 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 61 gaatact 67 ||||||| Sbjct: 960 gaatact 966
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 62 aatac 66 ||||| Sbjct: 548 aatac 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | || |||| |||| || ||| |||||| | |||||||||||| |||||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaag 976
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 327 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 143 bits (72), Expect = 6e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaag 1509 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1004 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 1063 Query: 61 gaatactaga 70 |||||||||| Sbjct: 1064 gaatactaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 927 ccctaagggttccagagccaggttcgtccac 957 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccac 5434026 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccac 3897412 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccac 2806747 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccac 1006255 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 62 aatac 66 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 62 aatac 66 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 62 aatac 66 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 62 aatac 66 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccac 5944069 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccac 4916425 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccac 2503871 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccac 2380551 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 62 aatac 66 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 62 aatac 66 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 62 aatac 66 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 62 aatac 66 ||||| Sbjct: 2378672 aatac 2378676
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 198 bits (100), Expect = 1e-47 Identities = 115/120 (95%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | | |||||||||||| |||||||| Sbjct: 887 aggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactca 946 Query: 61 gaatactaga 70 |||||||||| Sbjct: 947 gaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 198 bits (100), Expect = 1e-47 Identities = 115/120 (95%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | | |||||||||||| |||||||| Sbjct: 2656 aggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactca 2715 Query: 61 gaatactaga 70 |||||||||| Sbjct: 2716 gaatactaga 2725
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 240 bits (121), Expect = 4e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 365048 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 365107 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 365108 gaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtggggg 365167 Query: 121 ataagcttcatcgtcgagagg 141 ||||||||||||||||||||| Sbjct: 365168 ataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 136 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 195 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 196 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 254 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 255 gcgtaatagctcactg 270 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 211 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gtcgagagggaaacagcccggatc 156 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaag 2888 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 2403 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 2462 Query: 62 aatac 66 ||||| Sbjct: 2463 aatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccac 490 ||||||| || |||| |||| || |||||||||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccac 956 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 61 gaatact 67 ||||||| Sbjct: 546 gaatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 860 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactct 919 Query: 61 gaatactagata 72 |||||||||||| Sbjct: 920 gaatactagata 931
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 238 bits (120), Expect = 1e-59 Identities = 120/120 (100%) Strand = Plus / Minus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 25669 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactct 25728 Query: 61 gaatactagata 72 |||||||||||| Sbjct: 25729 gaatactagata 25740
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 238 bits (120), Expect = 1e-59 Identities = 120/120 (100%) Strand = Plus / Minus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 238 bits (120), Expect = 1e-59 Identities = 120/120 (100%) Strand = Plus / Plus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 62 aatactagat 71 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 9e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 337 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 338 gcatcggtaggggagcgttccg 359 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 453 cccgaaaacccaaggtttcc 472 ||||||| || |||| |||| Sbjct: 921 cccgaaaccctaagggttcc 940
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaag 971 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 487 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccg 359 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 460 acccaaggtttcctccgcaaggttcgtccac 490 || |||| |||| || |||||||||||| Sbjct: 927 ccctaagggttccagagccaggttcgtccac 957 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaag 2050504 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Plus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaag 1450997 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 50 |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050984 ggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 50 |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450517 ggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | | |||||||||||| |||||||| Sbjct: 137357 aggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactca 137416 Query: 61 gaatactag 69 ||||||||| Sbjct: 137417 gaatactag 137425 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||| | | |||||||||||| |||||||| Sbjct: 48187 aggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactca 48128 Query: 61 gaatactag 69 ||||||||| Sbjct: 48127 gaatactag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 283 tgcgctgaagatgaacggggctaag 307 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 62 aatac 66 ||||| Sbjct: 548 aatac 552
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 327 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 937 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaa 996 Query: 61 gaatactag 69 ||||||||| Sbjct: 997 gaatactag 1005
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaag 2887 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| |||||||| | || |||||||| |||||||||||||| Sbjct: 2402 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctg 2461 Query: 62 aatac 66 ||||| Sbjct: 2462 aatac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 460 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaag 980
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaag 3328372 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Minus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaag 2450356 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 3327886 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 3327945 Query: 62 aatac 66 ||||| Sbjct: 3327946 aatac 3327950 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 2450842 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 2450783 Query: 62 aatac 66 ||||| Sbjct: 2450782 aatac 2450778
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 3e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 397 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 456 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 457 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 511 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaa 1350 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||| || || |||||||||||| ||||||| Sbjct: 847 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaa 906 Query: 61 gaatactag 69 ||||||||| Sbjct: 907 gaatactag 915 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcggtaggggagcgttccg 359 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 282 ttgcgctgaagatgaacggggctaag 307 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 62 aatactagat 71 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 127 bits (64), Expect = 4e-26 Identities = 106/120 (88%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 62 aatac 66 ||||| Sbjct: 2333890 aatac 2333886
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 295 gaacggggctaagcgatctgccgaagctgtgggatgt 331 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1317 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactaa 1376 Query: 61 gaatacta 68 |||||||| Sbjct: 1377 gaatacta 1384
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 214 bits (108), Expect = 2e-52 Identities = 108/108 (100%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 49 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 108 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagta 425 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagct 322 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 870 aggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaa 929 Query: 61 gaatactaga 70 |||||||||| Sbjct: 930 gaatactaga 939
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 214 bits (108), Expect = 2e-52 Identities = 123/128 (96%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 47122 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 47181 Query: 61 gaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 47182 gaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggg 47241 Query: 121 ataagctt 128 |||||||| Sbjct: 47242 ataagctt 47249
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagct 322 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 343 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 402 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 403 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 462 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 463 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 514 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 2752 aggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaa 2811 Query: 61 gaatactaga 70 |||||||||| Sbjct: 2812 gaatactaga 2821
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 295 gaacggggctaagcgatctgccgaagctgtgggat 329 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 902 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaa 961 Query: 61 gaatacta 68 |||||||| Sbjct: 962 gaatacta 969
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 976
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 284 gcgctgaagatgaacggggctaagc 308 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 497 |||||| || |||| |||||||| ||||||||||| |||||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggt 951 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 62 aatac 66 ||||| Sbjct: 545 aatac 549
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaag 974 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 489 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 548 Query: 62 aatac 66 ||||| Sbjct: 549 aatac 553
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| Sbjct: 880 aggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaa 939 Query: 61 gaatact 67 ||||||| Sbjct: 940 gaatact 946
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 270 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| Sbjct: 2618 aggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaa 2677 Query: 61 gaatact 67 ||||||| Sbjct: 2678 gaatact 2684
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaag 980 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 61 gaatact 67 ||||||| Sbjct: 545 gaatact 551
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 329 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaag 980 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 61 gaatact 67 ||||||| Sbjct: 545 gaatact 551
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 8e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactca 933 Query: 61 gaatact 67 ||||||| Sbjct: 934 gaatact 940 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| |||||||||||||||||||||| || |||| |||||| ||||| |||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacgtaattgaaggtgtgaatccttcaccccggaaac 1318 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||| ||||||| | ||| ||||||| ||||||| ||||||| |||||| Sbjct: 1319 ccaagggttcctcctccaggctcgtccaaggagggttagtcaggtcctaag 1369
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 331 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 331 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 460 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaag 114063 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 400 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 459 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 460 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaag 3454 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114563 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 114504 Query: 61 gaatacta 68 |||||||| Sbjct: 114503 gaatacta 114496 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2954 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 3013 Query: 61 gaatacta 68 |||||||| Sbjct: 3014 gaatacta 3021 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 catcggtaggggagcgttccg 359 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 catcggtaggggagcgttccg 359 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 326 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 402 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 461 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 462 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 | |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 926 ctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 976 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 62 aatac 66 ||||| Sbjct: 547 aatac 551
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 136 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 195 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 196 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 254 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 255 gcgtaatagctcactg 270 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 284 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 342 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 343 ggtaggggagcgttc 357 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||||||||||||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 3041 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtcaggacctaag 3100
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 295 gaacggggctaagcgatctgccgaagctgtgggat 329 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 295 gaacggggctaagcgatctgccgaagctgtgggat 329 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 388 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 447 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 448 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 507 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226 Query: 508 ctaag 512 ||||| Sbjct: 193227 ctaag 193231 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 388 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 447 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 448 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 507 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556 Query: 508 ctaag 512 ||||| Sbjct: 143555 ctaag 143551 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 192733 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaa 192792 Query: 61 gaatacta 68 |||||||| Sbjct: 192793 gaatacta 192800 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 144049 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaa 143990 Query: 61 gaatacta 68 |||||||| Sbjct: 143989 gaatacta 143982
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 282 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 328 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 513 | | |||| ||||||| | ||||||||||| ||||||||||||||| ||||||| Sbjct: 1335 agtctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaaga 1389 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||| Sbjct: 885 aggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaactaa 944 Query: 61 gaatactaga 70 |||||||||| Sbjct: 945 gaatactaga 954 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 tcggtaggggagcgttccgcc 361 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 1659793 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1659852 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 1048951 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1048892 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 62 aatac 66 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 62 aatac 66 ||||| Sbjct: 1049320 aatac 1049316
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 103 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 162 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 163 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 222 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 223 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 282 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 283 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 342 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 343 ggtaggggagcgttccgc 360 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 |||||||||| |||| ||||| | | ||||||||||| ||||||| ||||||| |||||| Sbjct: 1285 cccgaaaacctaagggttccttcactaggttcgtccatggagggttagtcaggacctaag 1344 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 850 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaa 909 Query: 61 gaatact 67 ||||||| Sbjct: 910 gaatact 916
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 1555 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1614 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 62 aatac 66 ||||| Sbjct: 1186 aatac 1190
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 194 bits (98), Expect = 2e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 339 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 398 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 399 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 458 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 459 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3192 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 115 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 174 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 175 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 234 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 235 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 294 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 295 gaacggggctaagcgatctgccgaagctgtgggatgt 331 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 111 bits (56), Expect = 2e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 1 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 60 ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| Sbjct: 2685 aggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactct 2744 Query: 61 gaatacta 68 |||||||| Sbjct: 2745 gaatacta 2752
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 102 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 161 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 162 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 221 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 222 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 281 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 282 ttgcgctgaagatgaacggggctaag 307 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 2656993 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 2656934 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| |||||| Sbjct: 571928 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 571987 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 62 aatac 66 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 62 aatac 66 ||||| Sbjct: 571559 aatac 571563
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 8e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 105 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 164 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 165 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 224 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 225 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 284 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 285 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 325 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 |||||||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaacagcagtgtgaatctgctgc 1314 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 512 ||||||||||||||| |||||| | ||||||||||| |||||||||||||||| |||||| Sbjct: 1315 cccgaaaacccaagggttcctctggaaggttcgtccgcggagggtgagtcaggacctaag 1374 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 58 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 8e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 104 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 163 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 164 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 223 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 224 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 283 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 284 gcgctgaagatgaacggggctaagc 308 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 393 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 452 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 453 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 497 |||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 1569479 tccgaaagcacaaggtttcctccggaaggttcgtccgcggagggt 1569435 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 2 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 61 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1569901 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccg 1569842 Query: 62 aatac 66 ||||| Sbjct: 1569841 aatac 1569837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,111,873 Number of Sequences: 3902068 Number of extensions: 3111873 Number of successful extensions: 55854 Number of sequences better than 10.0: 2377 Number of HSP's better than 10.0 without gapping: 2410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43325 Number of HSP's gapped (non-prelim): 11899 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
