ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_189451.1| Oryza sativa (japonica cultivar-group), predic... 256 7e-65
2dbj|AK098940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 7e-65
3dbj|AK058329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 7e-65
4gb|BT018388.1| Zea mays clone EL01N0314F03.d mRNA sequence 208 1e-50
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
6dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
7gb|AY299389.1| Orf virus Orf-11 A29L-like protein and A28L-like ... 42 1.9
8emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene 42 1.9
9ref|XM_932503.1| PREDICTED: Homo sapiens cullin-associated and n... 42 1.9
10ref|XM_944849.1| PREDICTED: Homo sapiens cullin-associated and n... 42 1.9
11gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosom... 42 1.9
12gb|AC109258.12| Mus musculus chromosome 18, clone RP23-364K17, c... 42 1.9
13gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, comple... 42 1.9
14emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chr... 42 1.9
15dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.9
16gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 42 1.9
17gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 42 1.9
18dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:... 42 1.9
19gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.5
20gb|AY386264.1| Orf virus strain OV-SA00, complete genome 40 7.5
21gb|AY386263.1| Orf virus strain OV-IA82, complete genome 40 7.5
22emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 7.5
23ref|XM_386273.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 7.5
24gb|AC008134.3| Homo sapiens 3q26.2-27 BAC RPCI11-263C16 (Roswell... 40 7.5
25gb|DQ184476.1| Orf virus strain NZ2, complete genome 40 7.5
26gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 7.5
27emb|BX470234.8| Zebrafish DNA sequence from clone DKEY-94N12 in ... 40 7.5

>ref|NM_189451.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 984

 Score =  256 bits (129), Expect = 7e-65
 Identities = 342/413 (82%)
 Strand = Plus / Plus

                                                                       
Query: 142 ttgaacacggaggcgcccgacttctacatacggcagaatcccgtccctaacgcttacacc 201
           |||||||| || || || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct: 367 ttgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacacc 426

                                                                       
Query: 202 ctagcgataaacgggaaaaggccgttcgtcgtcgtccacacgagcctcgtggagctgctc 261
            ||||||| |  || |||| ||| ||| | || || || || ||||| ||||||||||||
Sbjct: 427 ttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctc 486

                                                                       
Query: 262 accagaaaggaattgcaggctgttttggcacatgagctgggtcacctcaagtgcgatcat 321
           || ||||| ||| |||||||||| ||||| ||||| ||||| ||||||||||| || |||
Sbjct: 487 actagaaaagaactgcaggctgtgttggctcatgaactgggacacctcaagtgtgaccat 546

                                                                       
Query: 322 ggcgtctggctcacctttgccaacatactaacaatgggggcatatactgtccctggtttc 381
           ||||| ||||| || |||||||||||||| |||||||| |||||  |||||||||| || 
Sbjct: 547 ggcgtgtggcttacatttgccaacatactgacaatgggagcatactctgtccctggattt 606

                                                                       
Query: 382 ggtatggttgctgggttccttgaagaacagctgttcaggtggctgcgcgccgcggagctg 441
           || |||||||||||||| || ||||| ||||| | ||||||||| || || || ||||||
Sbjct: 607 ggcatggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctg 666

                                                                       
Query: 442 acttgcgacagggcggctcttctcgtagtaaaagatcccaaggttgtcatctcggtcctg 501
           ||||| ||  | ||||||||||| |||||  | || ||||||||||| || || || |||
Sbjct: 667 acttgtgatcgagcggctcttcttgtagtgcaggaccccaaggttgtgatatctgtgctg 726

                                                                
Query: 502 atgaagctggcgggaggatgcccttcgctgtcggaccagctgaacgtggacgc 554
           ||||| ||||| ||||| ||||| |||||  ||||||||||||||||||||||
Sbjct: 727 atgaaactggccggagggtgcccgtcgcttgcggaccagctgaacgtggacgc 779



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggctcaatgatataggcaaggctttgttagggccggtttccgagcaagttatggttctt 60
           ||||| |||||||| |||||||||||| |||| || ||||| |||||||||||||| |||
Sbjct: 226 gggcttaatgatatgggcaaggctttgctaggaccagtttctgagcaagttatggtactt 285

                                                  
Query: 61  caaaacattgggtcatcggttctcgtctctgaaaaccag 99
           || |||||||| || || || || |||||||||||||||
Sbjct: 286 cagaacattggatcgtctgtgctagtctctgaaaaccag 324



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>dbj|AK098940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D06, full
           insert sequence
          Length = 1250

 Score =  256 bits (129), Expect = 7e-65
 Identities = 342/413 (82%)
 Strand = Plus / Plus

                                                                       
Query: 142 ttgaacacggaggcgcccgacttctacatacggcagaatcccgtccctaacgcttacacc 201
           |||||||| || || || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct: 421 ttgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacacc 480

                                                                       
Query: 202 ctagcgataaacgggaaaaggccgttcgtcgtcgtccacacgagcctcgtggagctgctc 261
            ||||||| |  || |||| ||| ||| | || || || || ||||| ||||||||||||
Sbjct: 481 ttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctc 540

                                                                       
Query: 262 accagaaaggaattgcaggctgttttggcacatgagctgggtcacctcaagtgcgatcat 321
           || ||||| ||| |||||||||| ||||| ||||| ||||| ||||||||||| || |||
Sbjct: 541 actagaaaagaactgcaggctgtgttggctcatgaactgggacacctcaagtgtgaccat 600

                                                                       
Query: 322 ggcgtctggctcacctttgccaacatactaacaatgggggcatatactgtccctggtttc 381
           ||||| ||||| || |||||||||||||| |||||||| |||||  |||||||||| || 
Sbjct: 601 ggcgtgtggcttacatttgccaacatactgacaatgggagcatactctgtccctggattt 660

                                                                       
Query: 382 ggtatggttgctgggttccttgaagaacagctgttcaggtggctgcgcgccgcggagctg 441
           || |||||||||||||| || ||||| ||||| | ||||||||| || || || ||||||
Sbjct: 661 ggcatggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctg 720

                                                                       
Query: 442 acttgcgacagggcggctcttctcgtagtaaaagatcccaaggttgtcatctcggtcctg 501
           ||||| ||  | ||||||||||| |||||  | || ||||||||||| || || || |||
Sbjct: 721 acttgtgatcgagcggctcttcttgtagtgcaggaccccaaggttgtgatatctgtgctg 780

                                                                
Query: 502 atgaagctggcgggaggatgcccttcgctgtcggaccagctgaacgtggacgc 554
           ||||| ||||| ||||| ||||| |||||  ||||||||||||||||||||||
Sbjct: 781 atgaaactggccggagggtgcccgtcgcttgcggaccagctgaacgtggacgc 833



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggctcaatgatataggcaaggctttgttagggccggtttccgagcaagttatggttctt 60
           ||||| |||||||| |||||||||||| |||| || ||||| |||||||||||||| |||
Sbjct: 280 gggcttaatgatatgggcaaggctttgctaggaccagtttctgagcaagttatggtactt 339

                                                  
Query: 61  caaaacattgggtcatcggttctcgtctctgaaaaccag 99
           || |||||||| || || || || |||||||||||||||
Sbjct: 340 cagaacattggatcgtctgtgctagtctctgaaaaccag 378



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>dbj|AK058329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-C02, full
           insert sequence
          Length = 1127

 Score =  256 bits (129), Expect = 7e-65
 Identities = 342/413 (82%)
 Strand = Plus / Plus

                                                                       
Query: 142 ttgaacacggaggcgcccgacttctacatacggcagaatcccgtccctaacgcttacacc 201
           |||||||| || || || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct: 401 ttgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacacc 460

                                                                       
Query: 202 ctagcgataaacgggaaaaggccgttcgtcgtcgtccacacgagcctcgtggagctgctc 261
            ||||||| |  || |||| ||| ||| | || || || || ||||| ||||||||||||
Sbjct: 461 ttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctc 520

                                                                       
Query: 262 accagaaaggaattgcaggctgttttggcacatgagctgggtcacctcaagtgcgatcat 321
           || ||||| ||| |||||||||| ||||| ||||| ||||| ||||||||||| || |||
Sbjct: 521 actagaaaagaactgcaggctgtgttggctcatgaactgggacacctcaagtgtgaccat 580

                                                                       
Query: 322 ggcgtctggctcacctttgccaacatactaacaatgggggcatatactgtccctggtttc 381
           ||||| ||||| || |||||||||||||| |||||||| |||||  |||||||||| || 
Sbjct: 581 ggcgtgtggcttacatttgccaacatactgacaatgggagcatactctgtccctggattt 640

                                                                       
Query: 382 ggtatggttgctgggttccttgaagaacagctgttcaggtggctgcgcgccgcggagctg 441
           || |||||||||||||| || ||||| ||||| | ||||||||| || || || ||||||
Sbjct: 641 ggcatggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctg 700

                                                                       
Query: 442 acttgcgacagggcggctcttctcgtagtaaaagatcccaaggttgtcatctcggtcctg 501
           ||||| ||  | ||||||||||| |||||  | || ||||||||||| || || || |||
Sbjct: 701 acttgtgatcgagcggctcttcttgtagtgcaggaccccaaggttgtgatatctgtgctg 760

                                                                
Query: 502 atgaagctggcgggaggatgcccttcgctgtcggaccagctgaacgtggacgc 554
           ||||| ||||| ||||| ||||| |||||  ||||||||||||||||||||||
Sbjct: 761 atgaaactggccggagggtgcccgtcgcttgcggaccagctgaacgtggacgc 813



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggctcaatgatataggcaaggctttgttagggccggtttccgagcaagttatggttctt 60
           ||||| |||||||| |||||||||||| |||| || ||||| |||||||||||||| |||
Sbjct: 260 gggcttaatgatatgggcaaggctttgctaggaccagtttctgagcaagttatggtactt 319

                                                  
Query: 61  caaaacattgggtcatcggttctcgtctctgaaaaccag 99
           || |||||||| || || || || |||||||||||||||
Sbjct: 320 cagaacattggatcgtctgtgctagtctctgaaaaccag 358



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>gb|BT018388.1| Zea mays clone EL01N0314F03.d mRNA sequence
          Length = 1468

 Score =  208 bits (105), Expect = 1e-50
 Identities = 255/305 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 gacttctacatacggcagaatcccgtccctaacgcttacaccctagcgataaacgggaaa 219
           ||||| |||||| |||||||||| || || || || |||||| |||| || ||||  |||
Sbjct: 513 gacttgtacataaggcagaatcctgttccaaatgcctacaccttagcaatcaacgacaaa 572

                                                                       
Query: 220 aggccgttcgtcgtcgtccacacgagcctcgtggagctgctcaccagaaaggaattgcag 279
           |  || ||| | ||||| ||||| ||||| ||||||||||| ||   || ||||||||||
Sbjct: 573 aaaccattcattgtcgttcacacaagccttgtggagctgcttactccaagggaattgcag 632

                                                                       
Query: 280 gctgttttggcacatgagctgggtcacctcaagtgcgatcatggcgtctggctcaccttt 339
           ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 633 gctgttttggctcatgagctgggtcacctcaagtgcgatcatggtgtttggctcactttt 692

                                                                       
Query: 340 gccaacatactaacaatgggggcatatactgtccctggtttcggtatggttgctgggttc 399
           ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 693 gccaatatactcacaatgggagcatacactgtccctggtttcggcatggttgctggcttt 752

                                                                       
Query: 400 cttgaagaacagctgttcaggtggctgcgcgccgcggagctgacttgcgacagggcggct 459
           || ||||| ||||| |  || ||||| |   | || ||||||||||| |||||||| |||
Sbjct: 753 ctggaagagcagctatatagatggctaccatctgcagagctgacttgtgacagggcagct 812

                
Query: 460 cttct 464
           |||||
Sbjct: 813 cttct 817



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 278      aggctgttttggcacatgagctgggtcacctcaagtgcgatcatggcgtctggctcacct 337
                ||||||| ||||| ||||| ||||| ||||||||||| || |||||||| ||||| || |
Sbjct: 42819511 aggctgtgttggctcatgaactgggacacctcaagtgtgaccatggcgtgtggcttacat 42819452

                                                         
Query: 338      ttgccaacatactaacaatgggggcatatactgtccctggt 378
                ||||||||||||| |||||||| |||||  |||||||||||
Sbjct: 42819451 ttgccaacatactgacaatgggagcatactctgtccctggt 42819411



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 482      aggttgtcatctcggtcctgatgaagctggcgggaggatgcccttcgctgtcggaccagc 541
                ||||||| || || || |||||||| ||||| ||||| ||||| |||||  |||||||||
Sbjct: 42819122 aggttgtgatatctgtgctgatgaaactggccggagggtgcccgtcgcttgcggaccagc 42819063

                             
Query: 542      tgaacgtggacgc 554
                |||||||||||||
Sbjct: 42819062 tgaacgtggacgc 42819050



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 37       gtttccgagcaagttatggttcttcaaaacattgggtcatcggttctcgtctctgaaaac 96
                ||||| |||||||||||||| ||||| |||||||| || || || || ||||||||||||
Sbjct: 42820340 gtttctgagcaagttatggtacttcagaacattggatcgtctgtgctagtctctgaaaac 42820281

                   
Query: 97       cag 99
                |||
Sbjct: 42820280 cag 42820278



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 112/139 (80%)
 Strand = Plus / Minus

                                                                            
Query: 142      ttgaacacggaggcgcccgacttctacatacggcagaatcccgtccctaacgcttacacc 201
                |||||||| || || || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct: 42819798 ttgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacacc 42819739

                                                                            
Query: 202      ctagcgataaacgggaaaaggccgttcgtcgtcgtccacacgagcctcgtggagctgctc 261
                 ||||||| |  || |||| ||| ||| | || || || || ||||| ||||||||||||
Sbjct: 42819738 ttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctc 42819679

                                   
Query: 262      accagaaaggaattgcagg 280
                || ||||| ||| ||||||
Sbjct: 42819678 actagaaaagaactgcagg 42819660



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                            
Query: 385      atggttgctgggttccttgaagaacagctgttcaggtggctgcgcgccgcggagctgact 444
                |||||||||||||| || ||||| ||||| | ||||||||| || || || |||||||||
Sbjct: 42819318 atggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctgact 42819259

                                          
Query: 445      tgcgacagggcggctcttctcgtagt 470
                || ||  | ||||||||||| |||||
Sbjct: 42819258 tgtgatcgagcggctcttcttgtagt 42819233



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 1        gggctcaatgatataggcaaggctttgttagg 32
                ||||| |||||||| |||||||||||| ||||
Sbjct: 42820606 gggcttaatgatatgggcaaggctttgctagg 42820575



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>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 278   aggctgttttggcacatgagctgggtcacctcaagtgcgatcatggcgtctggctcacct 337
             ||||||| ||||| ||||| ||||| ||||||||||| || |||||||| ||||| || |
Sbjct: 13245 aggctgtgttggctcatgaactgggacacctcaagtgtgaccatggcgtgtggcttacat 13186

                                                      
Query: 338   ttgccaacatactaacaatgggggcatatactgtccctggt 378
             ||||||||||||| |||||||| |||||  |||||||||||
Sbjct: 13185 ttgccaacatactgacaatgggagcatactctgtccctggt 13145



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 482   aggttgtcatctcggtcctgatgaagctggcgggaggatgcccttcgctgtcggaccagc 541
             ||||||| || || || |||||||| ||||| ||||| ||||| |||||  |||||||||
Sbjct: 12856 aggttgtgatatctgtgctgatgaaactggccggagggtgcccgtcgcttgcggaccagc 12797

                          
Query: 542   tgaacgtggacgc 554
             |||||||||||||
Sbjct: 12796 tgaacgtggacgc 12784



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 37    gtttccgagcaagttatggttcttcaaaacattgggtcatcggttctcgtctctgaaaac 96
             ||||| |||||||||||||| ||||| |||||||| || || || || ||||||||||||
Sbjct: 14074 gtttctgagcaagttatggtacttcagaacattggatcgtctgtgctagtctctgaaaac 14015

                
Query: 97    cag 99
             |||
Sbjct: 14014 cag 14012



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 112/139 (80%)
 Strand = Plus / Minus

                                                                         
Query: 142   ttgaacacggaggcgcccgacttctacatacggcagaatcccgtccctaacgcttacacc 201
             |||||||| || || || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct: 13532 ttgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacacc 13473

                                                                         
Query: 202   ctagcgataaacgggaaaaggccgttcgtcgtcgtccacacgagcctcgtggagctgctc 261
              ||||||| |  || |||| ||| ||| | || || || || ||||| ||||||||||||
Sbjct: 13472 ttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctc 13413

                                
Query: 262   accagaaaggaattgcagg 280
             || ||||| ||| ||||||
Sbjct: 13412 actagaaaagaactgcagg 13394



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 385   atggttgctgggttccttgaagaacagctgttcaggtggctgcgcgccgcggagctgact 444
             |||||||||||||| || ||||| ||||| | ||||||||| || || || |||||||||
Sbjct: 13052 atggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctgact 12993

                                       
Query: 445   tgcgacagggcggctcttctcgtagt 470
             || ||  | ||||||||||| |||||
Sbjct: 12992 tgtgatcgagcggctcttcttgtagt 12967



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 1     gggctcaatgatataggcaaggctttgttagg 32
             ||||| |||||||| |||||||||||| ||||
Sbjct: 14340 gggcttaatgatatgggcaaggctttgctagg 14309



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>gb|AY299389.1| Orf virus Orf-11 A29L-like protein and A28L-like protein mRNA,
           partial cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 422 ggctgcgcgccgcggagctga 442
           |||||||||||||||||||||
Sbjct: 904 ggctgcgcgccgcggagctga 924



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>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene
          Length = 2388

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 227 tcgtcgtcgtccacacgagcctcgt 251
           |||||||||||||| ||||||||||
Sbjct: 175 tcgtcgtcgtccacgcgagcctcgt 151



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>ref|XM_932503.1| PREDICTED: Homo sapiens cullin-associated and
           neddylation-dissociated 2 (putative), transcript variant
           2 (CAND2), mRNA
          Length = 759

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 419 ggtggctgcgcgccgcggagc 439
           |||||||||||||||||||||
Sbjct: 43  ggtggctgcgcgccgcggagc 23



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>ref|XM_944849.1| PREDICTED: Homo sapiens cullin-associated and
           neddylation-dissociated 2 (putative), transcript variant
           4 (CAND2), mRNA
          Length = 759

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 419 ggtggctgcgcgccgcggagc 439
           |||||||||||||||||||||
Sbjct: 43  ggtggctgcgcgccgcggagc 23



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>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete
             sequence
          Length = 196991

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   cagaaaggaattgcaggctgt 284
             |||||||||||||||||||||
Sbjct: 47613 cagaaaggaattgcaggctgt 47633



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>gb|AC109258.12| Mus musculus chromosome 18, clone RP23-364K17, complete sequence
          Length = 232399

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   tatggttgctgggttccttga 404
             |||||||||||||||||||||
Sbjct: 64670 tatggttgctgggttccttga 64690



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>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence
          Length = 168447

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   cagaaaggaattgcaggctgt 284
             |||||||||||||||||||||
Sbjct: 90978 cagaaaggaattgcaggctgt 90998



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>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete
              sequence
          Length = 199355

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    cagaaaggaattgcaggctgt 284
              |||||||||||||||||||||
Sbjct: 149434 cagaaaggaattgcaggctgt 149454



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>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete
             sequence
          Length = 174547

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   ggagctgctcaccagaaagga 272
             |||||||||||||||||||||
Sbjct: 17308 ggagctgctcaccagaaagga 17288



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>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   ggtggctgcgcgccgcggagc 439
             |||||||||||||||||||||
Sbjct: 84631 ggtggctgcgcgccgcggagc 84651



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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 419    ggtggctgcgcgccgcggagc 439
              |||||||||||||||||||||
Sbjct: 163273 ggtggctgcgcgccgcggagc 163293



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>dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:RP11-620B7, complete
              sequence
          Length = 176526

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    ggagctgctcaccagaaagga 272
              |||||||||||||||||||||
Sbjct: 146503 ggagctgctcaccagaaagga 146483



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 421     tggctgcgcgccgcggagctgact 444
               |||||||||||||||| |||||||
Sbjct: 3073530 tggctgcgcgccgcggcgctgact 3073507



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>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ggctgcgcgccgcggagctg 441
              ||||||||||||||||||||
Sbjct: 109525 ggctgcgcgccgcggagctg 109506



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>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ggctgcgcgccgcggagctg 441
              ||||||||||||||||||||
Sbjct: 108382 ggctgcgcgccgcggagctg 108363



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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 133     gcgaagatcttgaacacgga 152
               ||||||||||||||||||||
Sbjct: 2303808 gcgaagatcttgaacacgga 2303789



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>ref|XM_386273.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06097.1)
            partial mRNA
          Length = 5736

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  tgttttggcacatgagctgg 301
            ||||||||||||||||||||
Sbjct: 5034 tgttttggcacatgagctgg 5053



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>gb|AC008134.3| Homo sapiens 3q26.2-27 BAC RPCI11-263C16 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 175132

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    cagctgttcaggtggctgcg 428
              ||||||||||||||||||||
Sbjct: 171879 cagctgttcaggtggctgcg 171860



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>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ggctgcgcgccgcggagctg 441
              ||||||||||||||||||||
Sbjct: 108784 ggctgcgcgccgcggagctg 108765



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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     gggcatatactgtccctggt 378
               ||||||||||||||||||||
Sbjct: 2014991 gggcatatactgtccctggt 2015010



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>emb|BX470234.8| Zebrafish DNA sequence from clone DKEY-94N12 in linkage group 22,
              complete sequence
          Length = 149941

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    gaagaacagctgttcaggtg 422
              ||||||||||||||||||||
Sbjct: 148719 gaagaacagctgttcaggtg 148700


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,652,340
Number of Sequences: 3902068
Number of extensions: 3652340
Number of successful extensions: 61845
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61722
Number of HSP's gapped (non-prelim): 123
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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