ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1d06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053C07, full insert sequence Length = 2466 Score = 648 bits (327), Expect = 0.0 Identities = 543/611 (88%), Gaps = 3/611 (0%) Strand = Plus / Plus Query: 4 gaggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcg 63 ||||||||||||| | ||||| |||||| ||||| ||| |||||||||||||||| || | Sbjct: 387 gaggtggacttgg-accttgg-aaattatgagcgatttctggacatcaagttgactcgtg 444 Query: 64 acaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaagga 123 ||||||| |||||||| || |||||||| |||||||||||| |||||| |||||| |||| Sbjct: 445 acaacaatataaccacgggaaagatctatcaggctgttattgacaagg-aacgaagagga 503 Query: 124 gactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaagactgg 183 |||||| |||||||||||||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 504 gactacttgggaaaaactgttcaggttgtaccacacattacggatgaaatacaggagtgg 563 Query: 184 attgaacgtgtggcgatgaatccggttgatggcacagataagccagctgatgtttgtgtc 243 |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 564 attgaacgtgtggcaatgaatccagttgatggcacagatgagccagctgatgtttgtgta 623 Query: 244 atagaacttggtggcaccataggggacatcgaatcaatgccttttatcgaagcattgggt 303 ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 624 atagaacttggtggcactataggggatattgaatcaatgccttttattgaagcattaggt 683 Query: 304 caattttcgtaccgcgtaggacctggaaacttttgcttggttcatgttagtcttgtacca 363 |||||||| ||||||||||| |||||||||||||| | |||||||| |||||||||||| Sbjct: 684 caattttcataccgcgtaggggctggaaacttttgcctagttcatgtcagtcttgtacca 743 Query: 364 gttctaaccgtagttggtgaacagaaaacaaagcctacccagcatagtgtccgtggacta 423 ||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 744 gttctaaatgtagttggtgaacagaaaaccaaacctacccaacatagtgtccgtggacta 803 Query: 424 agaggacttgggttgatgcctgatatcttggcatgccgcagtactcagccactggaagaa 483 ||||||||||| |||| |||||||| || ||||| ||||||||||||||||| |||||| Sbjct: 804 agaggacttggactgatacctgatattttagcatgtcgcagtactcagccacttgaagaa 863 Query: 484 aatgtgaaactgaaactctcacagttttgccaagttccggtttcaaatatcgttaatctc 543 ||||||||| |||||||| |||| |||||||| |||||| | |||||||| || ||||| Sbjct: 864 aatgtgaaagtgaaactcgcacaattttgccacgttccgatctcaaatattgtcaatctt 923 Query: 544 catgatgtaacaaatatctggcacatccctttgttgctcagggatcagagagcccatgaa 603 || ||||| || || ||||||||||||||||||||||| ||||| |||| || |||||| Sbjct: 924 cacgatgttaccaacatctggcacatccctttgttgcttagggaccagaaggctcatgaa 983 Query: 604 gctattttgaa 614 ||||| |||| Sbjct: 984 tctattctgaa 994
>ref|NM_192420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 432 bits (218), Expect = e-118 Identities = 520/617 (84%), Gaps = 3/617 (0%) Strand = Plus / Plus Query: 4 gaggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcg 63 ||||||||||||| | ||||| ||||||||| || ||| |||||||||| |||||||| | Sbjct: 196 gaggtggacttgg-accttgg-aaattacgaacgttttctggacatcaaattgacccgtg 253 Query: 64 acaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaagga 123 | |||||||||||||| || || || || ||| | || |||||||| | || || | ||| Sbjct: 254 ataacaacataaccacgggaaaaatatatcagtcagtcattaacaaagaaaggaga-gga 312 Query: 124 gactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaagactgg 183 |||||| |||| ||||| ||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 313 gactacttggggaaaaccattcaggttgtgccacatattacagatgaaattcaagattgg 372 Query: 184 attgaacgtgtggcgatgaatccggttgatggcacagataagccagctgatgtttgtgtc 243 ||||||||||| |||||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 373 attgaacgtgtagcgatgaatccggtcgatggtaaagaaggacctcctgatgtttgtgtc 432 Query: 244 atagaacttggtggcaccataggggacatcgaatcaatgccttttatcgaagcattgggt 303 |||||||||||||||||||||||||| || ||||||||||| ||||| |||||||| ||| Sbjct: 433 atagaacttggtggcaccataggggatattgaatcaatgccctttattgaagcattaggt 492 Query: 304 caattttcgtaccgcgtaggacctggaaacttttgcttggttcatgttagtcttgtacca 363 |||||||| ||||| || |||||||||||||| || |||| ||||| |||||||| ||| Sbjct: 493 caattttcctaccgtgttggacctggaaacttctgtctggtccatgtcagtcttgttcca 552 Query: 364 gttctaaccgtagttggtgaacagaaaacaaagcctacccagcatagtgtccgtggacta 423 ||| ||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 553 gttttaaatgtagttggtgaacagaaaactaaacctacccagcatagtgttcgtgggcta 612 Query: 424 agaggacttgggttgatgcctgatatcttggcatgccgcagtactcagccactggaagaa 483 ||||| ||||| ||| ||||| || || ||||| |||||||| |||||||||||||| Sbjct: 613 agaggccttggattggcacctgacattttagcatgtcgcagtaccgagccactggaagaa 672 Query: 484 aatgtgaaactgaaactctcacagttttgccaagttccggtttcaaatatcgttaatctc 543 || |||||| || |||||||| ||||| || ||||| || |||| ||| |||||||| Sbjct: 673 aacgtgaaagcaaagctctcacaattttgtcacgttccagtctcaagtattattaatctc 732 Query: 544 catgatgtaacaaatatctggcacatccctttgttgctcagggatcagagagcccatgaa 603 ||||| || ||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 733 catgacgttacaaacatttggcacatccccttgttgctaagggaccaaagggcccatgaa 792 Query: 604 gctattttgaaggttct 620 |||||| |||| ||||| Sbjct: 793 gctattctgaaagttct 809
>dbj|AK069482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O19, full insert sequence Length = 2451 Score = 432 bits (218), Expect = e-118 Identities = 520/617 (84%), Gaps = 3/617 (0%) Strand = Plus / Plus Query: 4 gaggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcg 63 ||||||||||||| | ||||| ||||||||| || ||| |||||||||| |||||||| | Sbjct: 384 gaggtggacttgg-accttgg-aaattacgaacgttttctggacatcaaattgacccgtg 441 Query: 64 acaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaagga 123 | |||||||||||||| || || || || ||| | || |||||||| | || || | ||| Sbjct: 442 ataacaacataaccacgggaaaaatatatcagtcagtcattaacaaagaaaggaga-gga 500 Query: 124 gactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaagactgg 183 |||||| |||| ||||| ||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 501 gactacttggggaaaaccattcaggttgtgccacatattacagatgaaattcaagattgg 560 Query: 184 attgaacgtgtggcgatgaatccggttgatggcacagataagccagctgatgtttgtgtc 243 ||||||||||| |||||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 561 attgaacgtgtagcgatgaatccggtcgatggtaaagaaggacctcctgatgtttgtgtc 620 Query: 244 atagaacttggtggcaccataggggacatcgaatcaatgccttttatcgaagcattgggt 303 |||||||||||||||||||||||||| || ||||||||||| ||||| |||||||| ||| Sbjct: 621 atagaacttggtggcaccataggggatattgaatcaatgccctttattgaagcattaggt 680 Query: 304 caattttcgtaccgcgtaggacctggaaacttttgcttggttcatgttagtcttgtacca 363 |||||||| ||||| || |||||||||||||| || |||| ||||| |||||||| ||| Sbjct: 681 caattttcctaccgtgttggacctggaaacttctgtctggtccatgtcagtcttgttcca 740 Query: 364 gttctaaccgtagttggtgaacagaaaacaaagcctacccagcatagtgtccgtggacta 423 ||| ||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 741 gttttaaatgtagttggtgaacagaaaactaaacctacccagcatagtgttcgtgggcta 800 Query: 424 agaggacttgggttgatgcctgatatcttggcatgccgcagtactcagccactggaagaa 483 ||||| ||||| ||| ||||| || || ||||| |||||||| |||||||||||||| Sbjct: 801 agaggccttggattggcacctgacattttagcatgtcgcagtaccgagccactggaagaa 860 Query: 484 aatgtgaaactgaaactctcacagttttgccaagttccggtttcaaatatcgttaatctc 543 || |||||| || |||||||| ||||| || ||||| || |||| ||| |||||||| Sbjct: 861 aacgtgaaagcaaagctctcacaattttgtcacgttccagtctcaagtattattaatctc 920 Query: 544 catgatgtaacaaatatctggcacatccctttgttgctcagggatcagagagcccatgaa 603 ||||| || ||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 921 catgacgttacaaacatttggcacatccccttgttgctaagggaccaaagggcccatgaa 980 Query: 604 gctattttgaaggttct 620 |||||| |||| ||||| Sbjct: 981 gctattctgaaagttct 997
>gb|BT013487.1| Lycopersicon esculentum clone 132171F, mRNA sequence Length = 2418 Score = 176 bits (89), Expect = 6e-41 Identities = 311/384 (80%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 30 tacgagcggtttttggacatcaagttgacccgcgacaacaacataaccactgggaagatc 89 |||||||| ||| | || || ||||||||| |||||||||| ||||| |||||||| || Sbjct: 354 tacgagcgttttctagatattaagttgaccggcgacaacaatataactactgggaaaatt 413 Query: 90 taccaggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttcaggt 149 || ||| |||||||| | |||| | ||||||| || || ||||||| ||||||||||| Sbjct: 414 tatcagtctgttattgataaggaga-gaaaaggggattatttgggaaagactgttcaggt 472 Query: 150 tgtgccgcacattactgatgaaatacaagactggattgaacgtgtggcgatgaatccggt 209 ||| || |||||||| |||| || ||||| ||||| ||||||||||| | | || || Sbjct: 473 tgtccctcacattacagatgccattcaagagtggatagaacgtgtggctgtcataccagt 532 Query: 210 tgatggcacagataagccagctgatgtttgtgtcatagaacttggtggcaccatagggga 269 |||||||| ||| ||| | |||||||||||||||||||| |||||||| ||||| || Sbjct: 533 tgatggcaaggatggcccaccagatgtttgtgtcatagaactgggtggcacaataggaga 592 Query: 270 catcgaatcaatgccttttatcgaagcattgggtcaattttcgtaccgcgtaggacctgg 329 || ||||||||||| ||||| |||||||| || ||||| || || || ||||| |||| Sbjct: 593 tattgaatcaatgccatttattgaagcattaggacaattctcatatcgtgtaggtgctgg 652 Query: 330 aaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaacagaa 389 || ||||||||| | |||||||| ||||| || ||| | | ||||||||||| ||||| Sbjct: 653 taatttttgcttgatacatgttagccttgttcctgttttgagtgtagttggtgagcagaa 712 Query: 390 aacaaagcctacccagcatagtgt 413 |||||| ||||| ||||| ||||| Sbjct: 713 aacaaaacctactcagcacagtgt 736
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 165 bits (83), Expect = 2e-37 Identities = 113/123 (91%) Strand = Plus / Minus Query: 144 tcaggttgtgccgcacattactgatgaaatacaagactggattgaacgtgtggcgatgaa 203 ||||||||| || |||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 118922 tcaggttgtaccacacattacggatgaaatacaggagtggattgaacgtgtggcaatgaa 118863 Query: 204 tccggttgatggcacagataagccagctgatgtttgtgtcatagaacttggtggcaccat 263 ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 118862 tccagttgatggcacagatgagccagctgatgtttgtgtaatagaacttggtggcactat 118803 Query: 264 agg 266 ||| Sbjct: 118802 agg 118800 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcctg 445 ||||||| || |||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct: 118304 agaaaaccaaacctacccaacatagtgtccgtggactaagaggacttggactgatacctg 118245 Query: 446 atatcttggcatgccgcagtactcag 471 |||| || ||||| |||||||||||| Sbjct: 118244 atattttagcatgtcgcagtactcag 118219 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 326 ctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaac 385 |||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 118465 ctggaaacttttgcctagttcatgtcagtcttgtaccagttctaaatgtagttggtgaac 118406 Query: 386 ag 387 || Sbjct: 118405 ag 118404 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaattttcgtaccgcgtagg 323 |||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 118625 aggggatattgaatcaatgccttttattgaagcattaggtcaattttcataccgcgtagg 118566 Score = 73.8 bits (37), Expect = 6e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 93 caggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttcaggt 149 |||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 119070 caggctgttattgacaagg-aacgaagaggagactacttgggaaaaactgttcaggt 119015 Score = 71.9 bits (36), Expect = 2e-09 Identities = 80/92 (86%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| | ||||| |||||| ||||| ||| |||||||||||||||| || || Sbjct: 119558 aggtggacttgg-accttgg-aaattatgagcgatttctggacatcaagttgactcgtga 119501 Query: 65 caacaacataaccactgggaagatctaccagg 96 |||||| |||||||| || |||||||| |||| Sbjct: 119500 caacaatataaccacgggaaagatctatcagg 119469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 469 cagccactggaagaaaatgtgaaactgaaactctcacagttttgccaagttccggt 524 |||||||| ||||||||||||||| |||||||| |||| |||||||| |||||||| Sbjct: 118109 cagccacttgaagaaaatgtgaaagtgaaactcgcacaattttgccacgttccggt 118054 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 526 tcaaatatcgttaatctccatgatgtaacaaatatctggcacatccctttgttgctcagg 585 |||||||| || ||||| || ||||| || || ||||||||||||||||||||||| ||| Sbjct: 117969 tcaaatattgtcaatcttcacgatgttaccaacatctggcacatccctttgttgcttagg 117910 Query: 586 g 586 | Sbjct: 117909 g 117909
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 113/123 (91%) Strand = Plus / Minus Query: 144 tcaggttgtgccgcacattactgatgaaatacaagactggattgaacgtgtggcgatgaa 203 ||||||||| || |||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 28334680 tcaggttgtaccacacattacggatgaaatacaggagtggattgaacgtgtggcaatgaa 28334621 Query: 204 tccggttgatggcacagataagccagctgatgtttgtgtcatagaacttggtggcaccat 263 ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 28334620 tccagttgatggcacagatgagccagctgatgtttgtgtaatagaacttggtggcactat 28334561 Query: 264 agg 266 ||| Sbjct: 28334560 agg 28334558 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcctg 445 ||||||| || |||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct: 28334062 agaaaaccaaacctacccaacatagtgtccgtggactaagaggacttggactgatacctg 28334003 Query: 446 atatcttggcatgccgcagtactcag 471 |||| || ||||| |||||||||||| Sbjct: 28334002 atattttagcatgtcgcagtactcag 28333977 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 326 ctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaac 385 |||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 28334223 ctggaaacttttgcctagttcatgtcagtcttgtaccagttctaaatgtagttggtgaac 28334164 Query: 386 ag 387 || Sbjct: 28334163 ag 28334162 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaattttcgtaccgcgtagg 323 |||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 28334383 aggggatattgaatcaatgccttttattgaagcattaggtcaattttcataccgcgtagg 28334324 Score = 73.8 bits (37), Expect = 6e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 93 caggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttcaggt 149 |||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 28334828 caggctgttattgacaagg-aacgaagaggagactacttgggaaaaactgttcaggt 28334773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 80/92 (86%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| | ||||| |||||| ||||| ||| |||||||||||||||| || || Sbjct: 28335316 aggtggacttgg-accttgg-aaattatgagcgatttctggacatcaagttgactcgtga 28335259 Query: 65 caacaacataaccactgggaagatctaccagg 96 |||||| |||||||| || |||||||| |||| Sbjct: 28335258 caacaatataaccacgggaaagatctatcagg 28335227 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 469 cagccactggaagaaaatgtgaaactgaaactctcacagttttgccaagttccggt 524 |||||||| ||||||||||||||| |||||||| |||| |||||||| |||||||| Sbjct: 28333867 cagccacttgaagaaaatgtgaaagtgaaactcgcacaattttgccacgttccggt 28333812 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 526 tcaaatatcgttaatctccatgatgtaacaaatatctggcacatccctttgttgctcagg 585 |||||||| || ||||| || ||||| || || ||||||||||||||||||||||| ||| Sbjct: 28333727 tcaaatattgtcaatcttcacgatgttaccaacatctggcacatccctttgttgcttagg 28333668 Query: 586 g 586 | Sbjct: 28333667 g 28333667 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 167 atgaaatacaagactggattgaacgtgtggcgatgaatccggttgatggc 216 |||| |||||||| |||||||| ||||| ||||| ||||||||||||| Sbjct: 28173815 atgagatacaagattggattgagcgtgtcgcgatagttccggttgatggc 28173864
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 5e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 143 ttcaggttgtgccgcacattactgatgaaatacaagactggattgaacgtgtggcgatga 202 ||||||||||||| || ||||| |||||||| ||||| |||||||||||||| ||||||| Sbjct: 26510576 ttcaggttgtgccacatattacagatgaaattcaagattggattgaacgtgtagcgatga 26510635 Query: 203 atccggttgatggcacagataagccagctgatgtttgtgtcatagaacttggtggcacca 262 ||||||| ||||| | ||| || ||||||||||||||||||||||||||||||||| Sbjct: 26510636 atccggtcgatggtaaagaaggacctcctgatgtttgtgtcatagaacttggtggcacca 26510695 Query: 263 tagg 266 |||| Sbjct: 26510696 tagg 26510699 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 319 gtaggacctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagtt 378 ||||||||||||||||| || |||| ||||| |||||||| |||||| ||| |||||| Sbjct: 26511011 gtaggacctggaaacttctgtctggtccatgtcagtcttgttccagttttaaatgtagtt 26511070 Query: 379 ggtgaacag 387 ||||||||| Sbjct: 26511071 ggtgaacag 26511079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 66/75 (88%), Gaps = 2/75 (2%) Strand = Plus / Plus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| | ||||| ||||||||| || ||| |||||||||| |||||||| || Sbjct: 26509671 aggtggacttgg-accttgg-aaattacgaacgttttctggacatcaaattgacccgtga 26509728 Query: 65 caacaacataaccac 79 |||||||||||||| Sbjct: 26509729 taacaacataaccac 26509743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 325 cctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaa 384 ||||| |||||||| ||||| |||||||||||||| |||||||| | || ||||||||| Sbjct: 24498137 cctggtaacttttgtttggtgcatgttagtcttgttccagttctgaatgttgttggtgaa 24498078 Query: 385 cag 387 ||| Sbjct: 24498077 cag 24498075 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcctg 445 ||||||| || ||||||||||||||||| ||||| |||||||| ||||| ||| |||| Sbjct: 26511552 agaaaactaaacctacccagcatagtgttcgtgggctaagaggccttggattggcacctg 26511611 Query: 446 atatcttggcatgccgcagtac 467 | || || ||||| |||||||| Sbjct: 26511612 acattttagcatgtcgcagtac 26511633 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaattttcgtaccg 317 |||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 26510866 aggggatattgaatcaatgccctttattgaagcattaggtcaattttcctaccg 26510919 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 536 ttaatctccatgatgtaacaaatatctggcacatccctttgttgctcaggg 586 ||||||||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 26511887 ttaatctccatgacgttacaaacatttggcacatccccttgttgctaaggg 26511937 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 226 ccagctgatgtttgtgtcatagaacttgg 254 ||||||||||||||||| ||||||||||| Sbjct: 24498448 ccagctgatgtttgtgtgatagaacttgg 24498420 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 474 actggaagaaaatgtgaaactgaaactctcacagttttgccaagttccggt 524 |||||||||||||||||| ||||||||| ||||| ||||| || ||||| Sbjct: 24497750 actggaagaaaatgtgaaggagaaactctctcagttctgccatgtaccggt 24497700 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 ||||||| ||||| || || ||||||||||||||| |||| || |||||| Sbjct: 24497936 agaaaactaagccgactcaacatagtgtccgtggattaaggggtcttggg 24497887 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 469 cagccactggaagaaaatgtgaaactgaaactctcacagttttgccaagttcc 521 ||||||||||||||||| |||||| || |||||||| ||||| || ||||| Sbjct: 26511738 cagccactggaagaaaacgtgaaagcaaagctctcacaattttgtcacgttcc 26511790 Score = 42.1 bits (21), Expect = 2.2 Identities = 76/92 (82%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| ||||||| || ||||||| ||||| | ||||| || | ||| | || Sbjct: 24499188 aggtggacttgg-atcttgggaa-ttacgagaggtttcttgacattaaactaaccaggga 24499131 Query: 65 caacaacataaccactgggaagatctaccagg 96 ||| || |||||||| || ||||||||||||| Sbjct: 24499130 caataatataaccacaggaaagatctaccagg 24499099 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaatt 308 |||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 24498301 aggggatattgaatctatgccatttatcgaagctttgggccaatt 24498257
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 127 bits (64), Expect = 5e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 143 ttcaggttgtgccgcacattactgatgaaatacaagactggattgaacgtgtggcgatga 202 ||||||||||||| || ||||| |||||||| ||||| |||||||||||||| ||||||| Sbjct: 119195 ttcaggttgtgccacatattacagatgaaattcaagattggattgaacgtgtagcgatga 119254 Query: 203 atccggttgatggcacagataagccagctgatgtttgtgtcatagaacttggtggcacca 262 ||||||| ||||| | ||| || ||||||||||||||||||||||||||||||||| Sbjct: 119255 atccggtcgatggtaaagaaggacctcctgatgtttgtgtcatagaacttggtggcacca 119314 Query: 263 tagg 266 |||| Sbjct: 119315 tagg 119318 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 319 gtaggacctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagtt 378 ||||||||||||||||| || |||| ||||| |||||||| |||||| ||| |||||| Sbjct: 119630 gtaggacctggaaacttctgtctggtccatgtcagtcttgttccagttttaaatgtagtt 119689 Query: 379 ggtgaacag 387 ||||||||| Sbjct: 119690 ggtgaacag 119698 Score = 61.9 bits (31), Expect = 2e-06 Identities = 66/75 (88%), Gaps = 2/75 (2%) Strand = Plus / Plus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| | ||||| ||||||||| || ||| |||||||||| |||||||| || Sbjct: 118290 aggtggacttgg-accttgg-aaattacgaacgttttctggacatcaaattgacccgtga 118347 Query: 65 caacaacataaccac 79 |||||||||||||| Sbjct: 118348 taacaacataaccac 118362 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcctg 445 ||||||| || ||||||||||||||||| ||||| |||||||| ||||| ||| |||| Sbjct: 120171 agaaaactaaacctacccagcatagtgttcgtgggctaagaggccttggattggcacctg 120230 Query: 446 atatcttggcatgccgcagtac 467 | || || ||||| |||||||| Sbjct: 120231 acattttagcatgtcgcagtac 120252 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaattttcgtaccg 317 |||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 119485 aggggatattgaatcaatgccctttattgaagcattaggtcaattttcctaccg 119538 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 536 ttaatctccatgatgtaacaaatatctggcacatccctttgttgctcaggg 586 ||||||||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 120506 ttaatctccatgacgttacaaacatttggcacatccccttgttgctaaggg 120556 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 469 cagccactggaagaaaatgtgaaactgaaactctcacagttttgccaagttcc 521 ||||||||||||||||| |||||| || |||||||| ||||| || ||||| Sbjct: 120357 cagccactggaagaaaacgtgaaagcaaagctctcacaattttgtcacgttcc 120409
>gb|BT014620.1| Lycopersicon esculentum clone 134123F, mRNA sequence Length = 1912 Score = 121 bits (61), Expect = 3e-24 Identities = 277/348 (79%), Gaps = 1/348 (0%) Strand = Plus / Plus Query: 51 aagttgacccgcgacaacaacataaccactgggaagatctaccaggctgttattaacaag 110 |||||||| || |||||||| ||||| ||||| || || |||||| ||||| || | ||| Sbjct: 411 aagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataag 470 Query: 111 gnaacgaaaaggagactacctgggaaaaactgttcaggttgtgccgcacattactgatga 170 | | |||||||||| || |||| || ||||||||||| || || |||||||| |||| Sbjct: 471 gaga-gaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgc 529 Query: 171 aatacaagactggattgaacgtgtggcgatgaatccggttgatggcacagataagccagc 230 || ||||| ||||||||||||||||| | | || |||||||| |||| ||||| Sbjct: 530 cattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagc 589 Query: 231 tgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgccttttat 290 |||||||||||| |||||||| ||||| || ||||| || || || || ||||| ||||| Sbjct: 590 tgatgtttgtgttatagaactgggtggaactataggagatattgagtctatgccatttat 649 Query: 291 cgaagcattgggtcaattttcgtaccgcgtaggacctggaaacttttgcttggttcatgt 350 ||||| || || ||||| || || || ||||| ||||||| ||||||||| | ||||| Sbjct: 650 tgaagctttaggacaattctcatatcgtgtaggtgctggaaatttttgcttgatacatgt 709 Query: 351 tagtcttgtaccagttctaaccgtagttggtgaacagaaaacaaagcc 398 || ||||| || ||| | | ||||||||||| |||||||||||||| Sbjct: 710 cagccttgtgcccgttttgaatgtagttggtgagcagaaaacaaagcc 757
>ref|NM_192800.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1860 Score = 117 bits (59), Expect = 5e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 325 cctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaa 384 ||||| |||||||| ||||| |||||||||||||| |||||||| | || ||||||||| Sbjct: 556 cctggtaacttttgtttggtgcatgttagtcttgttccagttctgaatgttgttggtgaa 615 Query: 385 cagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcct 444 |||||||| ||||| || || ||||||||||||||| |||| || |||||| | | || Sbjct: 616 cagaaaactaagccgactcaacatagtgtccgtggattaaggggtcttgggctcacacca 675 Query: 445 gatatcttggcatgccgcagtactcagccactggaagaaaatgtgaaactgaaactctca 504 |||| || || || ||||||||| || |||||||||||||||||| ||||||||| Sbjct: 676 aatattttagcctgtcgcagtactaaggaactggaagaaaatgtgaaggagaaactctct 735 Query: 505 cagttttgcca 515 ||||| ||||| Sbjct: 736 cagttctgcca 746 Score = 107 bits (54), Expect = 4e-20 Identities = 247/308 (80%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 1 ggcgaggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgaccc 60 |||||||||||||||| ||||||| || ||||||| ||||| | ||||| || | ||| Sbjct: 193 ggcgaggtggacttgg-atcttgggaa-ttacgagaggtttcttgacattaaactaacca 250 Query: 61 gcgacaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaa 120 | ||||| || |||||||| || |||||||||||| | ||| || | |||| || ||| Sbjct: 251 gggacaataatataaccacaggaaagatctaccagtccgttcttgaaaaggaaaggaagg 310 Query: 121 ggagactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaagac 180 || || ||| ||||||| |||||||||||||| ||||| || || ||| |||||||| Sbjct: 311 gg-gaatacttgggaaagactgttcaggttgtcccgcatatcacaaatgccatacaagag 369 Query: 181 tggattgaacgtgtggcgatgaatccggttgatggcacagataagccagctgatgtttgt 240 |||||||| ||||| || ||| || || ||||||| || ||||||||||||||| Sbjct: 370 tggattgagcgtgtcgcaatggtacctgtagatggcaaggagggaccagctgatgtttgt 429 Query: 241 gtcatagaacttggtggcaccataggggacatcgaatcaatgccttttatcgaagcattg 300 || ||||||||||| || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 430 gtgatagaacttgggggtactataggggatattgaatctatgccatttatcgaagctttg 489 Query: 301 ggtcaatt 308 || ||||| Sbjct: 490 ggccaatt 497
>gb|AY679128.1| Zea mays putative CTP synthase (Umi8) mRNA, partial cds Length = 190 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 292 gaagcattgggtcaattttcgtaccgcgtaggacctggaaacttttgcttggttcatgtt 351 ||||| || |||||||| |||||||| || |||||||||||||| || | |||||||| Sbjct: 4 gaagcgttaggtcaattctcgtaccgtgttggacctggaaacttctgtctcgttcatgtc 63 Query: 352 agtcttgtaccagttctaaccgtagttggtgaacagaaaacaaagcctacccagcatagt 411 |||||||| || ||||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 64 agtcttgttccggttctaaatgtagtcggtgaacagaaaactaagcctacacagcacagt 123 Query: 412 gtccgtggactaagaggacttgggtt 437 || || || || ||||| |||||||| Sbjct: 124 gttcgagggcttagagggcttgggtt 149
>ref|NM_116444.2| Arabidopsis thaliana CTP synthase/ catalytic AT4G02120 mRNA, complete cds Length = 1890 Score = 101 bits (51), Expect = 3e-18 Identities = 94/107 (87%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaagg 122 |||||||||||||||||||||||||| || ||| ||||| || |||||| |||| ||||| Sbjct: 285 gacaacaacataaccactgggaagatatatcagtctgttcttgacaagg-aacggaaagg 343 Query: 123 agactacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| || || |||||||||||||| || ||||||||||||| Sbjct: 344 cgactaccttgggaagactgttcaggttgttccacacattactgatg 390 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 gacatcgaatcaatgccttttatcga 293 |||||||| ||||||||||||||||| Sbjct: 489 gacatcgagtcaatgccttttatcga 514 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 376 gttggtgaacagaaaacaaagcctacccagcatagtgtccgtggactaagag 427 ||||| || |||||||||||||| ||||| || | |||||| | |||||||| Sbjct: 597 gttggggagcagaaaacaaagccaacccaacacactgtccgagaactaagag 648
>gb|AY140051.1| Arabidopsis thaliana CTP synthase-like protein (At4g02120) mRNA, complete cds Length = 1889 Score = 101 bits (51), Expect = 3e-18 Identities = 94/107 (87%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaagg 122 |||||||||||||||||||||||||| || ||| ||||| || |||||| |||| ||||| Sbjct: 285 gacaacaacataaccactgggaagatatatcagtctgttcttgacaagg-aacggaaagg 343 Query: 123 agactacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| || || |||||||||||||| || ||||||||||||| Sbjct: 344 cgactaccttgggaagactgttcaggttgttccacacattactgatg 390 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 gacatcgaatcaatgccttttatcga 293 |||||||| ||||||||||||||||| Sbjct: 489 gacatcgagtcaatgccttttatcga 514 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 376 gttggtgaacagaaaacaaagcctacccagcatagtgtccgtggactaagag 427 ||||| || |||||||||||||| ||||| || | |||||| | |||||||| Sbjct: 597 gttggggagcagaaaacaaagccaacccaacacactgtccgagaactaagag 648
>ref|NM_112102.2| Arabidopsis thaliana EMB2742; CTP synthase/ catalytic AT3G12670 (EMB2742) mRNA, complete cds Length = 2056 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 230 ctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcctttta 289 |||||||||||||||| ||| | || || || ||||| || || ||||| ||||| |||| Sbjct: 468 ctgatgtttgtgtcatcgaattaggcgggactataggtgatattgaatctatgcccttta 527 Query: 290 tcgaagcattgggtcaattttcgtaccgcgtaggacctggaaacttttgcttggttcatg 349 | || || | |||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 528 ttgaggcccttggtcaattctcgtataaagttggacctggtaatttctgcttggttcatg 587 Query: 350 ttagtcttgtaccagttctaaccgtagttggtgaacagaaaacaaagcctacccagcata 409 | || ||||| || ||||| | || |||||||||||||| || ||||| |||||||||| Sbjct: 588 tcagccttgtgcctgttctcagtgttgttggtgaacagaagacgaagccaacccagcata 647 Query: 410 gtgt 413 |||| Sbjct: 648 gtgt 651
>gb|BT008360.1| Arabidopsis thaliana At3g12670 gene, complete cds Length = 1776 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 230 ctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcctttta 289 |||||||||||||||| ||| | || || || ||||| || || ||||| ||||| |||| Sbjct: 419 ctgatgtttgtgtcatcgaattaggcgggactataggtgatattgaatctatgcccttta 478 Query: 290 tcgaagcattgggtcaattttcgtaccgcgtaggacctggaaacttttgcttggttcatg 349 | || || | |||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 479 ttgaggcccttggtcaattctcgtataaagttggacctggtaatttctgcttggttcatg 538 Query: 350 ttagtcttgtaccagttctaaccgtagttggtgaacagaaaacaaagcctacccagcata 409 | || ||||| || ||||| | || |||||||||||||| || ||||| |||||||||| Sbjct: 539 tcagccttgtgcctgttctcagtgttgttggtgaacagaagacgaagccaacccagcata 598 Query: 410 gtgt 413 |||| Sbjct: 599 gtgt 602
>gb|AY093110.1| Arabidopsis thaliana CTP-synthetase, putative (At3g12670) mRNA, complete cds Length = 2056 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 230 ctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcctttta 289 |||||||||||||||| ||| | || || || ||||| || || ||||| ||||| |||| Sbjct: 468 ctgatgtttgtgtcatcgaattaggcgggactataggtgatattgaatctatgcccttta 527 Query: 290 tcgaagcattgggtcaattttcgtaccgcgtaggacctggaaacttttgcttggttcatg 349 | || || | |||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 528 ttgaggcccttggtcaattctcgtataaagttggacctggtaatttctgcttggttcatg 587 Query: 350 ttagtcttgtaccagttctaaccgtagttggtgaacagaaaacaaagcctacccagcata 409 | || ||||| || ||||| | || |||||||||||||| || ||||| |||||||||| Sbjct: 588 tcagccttgtgcctgttctcagtgttgttggtgaacagaagacgaagccaacccagcata 647 Query: 410 gtgt 413 |||| Sbjct: 648 gtgt 651
>ref|NM_118151.3| Arabidopsis thaliana CTP synthase/ catalytic AT4G20320 mRNA, complete cds Length = 2348 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 226 ccagctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcct 285 ||||||||||||||||||||||||||||| || || ||||| || || || || |||||| Sbjct: 502 ccagctgatgtttgtgtcatagaacttggaggaactataggagatatagagtccatgcct 561 Query: 286 tttatcgaagc 296 ||||| ||||| Sbjct: 562 tttattgaagc 572 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 422 taagaggacttgggttgatgcctgatatcttggcatgccgcagtactcagccactggaag 481 ||||||| ||||| |||| ||| |||||||||| ||||| || || ||||||| |||| Sbjct: 698 taagaggccttggcttgagccctaatatcttggcttgccggagcacaaagccacttgaag 757 Query: 482 aaaatgtgaaactgaaactctcacagttttgcca 515 | |||||||| |||||||| ||||||||||| Sbjct: 758 ataatgtgaaggccaaactctctcagttttgcca 791
>emb|AJ234671.1|HVU234671 Hordeum vulgare genomic DNA fragment; clone MWG0952.uni Length = 602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 385 cagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttgggttgatgcct 444 |||||||| |||||||||||||| ||||| ||||| |||| |||||||||||| ||| Sbjct: 318 cagaaaactaagcctacccagcacagtgttcgtggcttaaggggacttgggttggcacct 259 Query: 445 gatatcttggcatgccgcagtac 467 || || ||||||||||| ||||| Sbjct: 258 gacattttggcatgccgaagtac 236
>gb|AY107651.1| Zea mays PCO080366 mRNA sequence Length = 642 Score = 69.9 bits (35), Expect = 1e-08 Identities = 132/161 (81%), Gaps = 3/161 (1%) Strand = Plus / Plus Query: 1 ggcgaggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgaccc 60 |||||||||||||||| ||||||| || ||||||| | ||||||||||| || | || | Sbjct: 400 ggcgaggtggacttgg-atcttggtaa-ttacgagagatttttggacattaaacttactc 457 Query: 61 gcgacaacaacataaccactgggaagatctaccaggctgttattaacaaggnaacgaaaa 120 | ||||| || ||||||||||| |||||||| ||| |||| ||| |||||| | | ||| Sbjct: 458 gggacaataatataaccactggaaagatctatcagtctgtaattgacaaggaga-ggaaa 516 Query: 121 ggagactacctgggaaaaactgttcaggttgtgccgcacat 161 || || || ||||||| ||||| ||||||||||| ||||| Sbjct: 517 ggggaatatttgggaaagactgtccaggttgtgccacacat 557
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 63.9 bits (32), Expect = 6e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 90 taccaggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttcaggt 149 |||||| ||||| || |||||| |||| ||||| |||||||| || || ||||||||||| Sbjct: 170265 taccagtctgttcttgacaagg-aacggaaaggcgactaccttgggaagactgttcaggt 170323 Query: 150 tgtgccgcacattactgatg 169 ||| || ||||||||||||| Sbjct: 170324 tgttccacacattactgatg 170343 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 |||||||||||||||||||||||||| Sbjct: 170150 gacaacaacataaccactgggaagat 170175 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 261 cataggggacatcgaatcaatgccttttatcga 293 |||||| |||||||| ||||||||||||||||| Sbjct: 170509 cataggtgacatcgagtcaatgccttttatcga 170541
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 63.9 bits (32), Expect = 6e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 90 taccaggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttcaggt 149 |||||| ||||| || |||||| |||| ||||| |||||||| || || ||||||||||| Sbjct: 67661 taccagtctgttcttgacaagg-aacggaaaggcgactaccttgggaagactgttcaggt 67719 Query: 150 tgtgccgcacattactgatg 169 ||| || ||||||||||||| Sbjct: 67720 tgttccacacattactgatg 67739 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 |||||||||||||||||||||||||| Sbjct: 67546 gacaacaacataaccactgggaagat 67571 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 261 cataggggacatcgaatcaatgccttttatcga 293 |||||| |||||||| ||||||||||||||||| Sbjct: 67905 cataggtgacatcgagtcaatgccttttatcga 67937
>gb|S79193.1|S79193 Cricetulus griseus CTP synthetase mRNA, partial cds Length = 1341 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 75 accactgggaagatctaccaggctgttattaacaaggnaacgaaaaggagactacctggg 134 ||||| |||||||| |||||| |||||||||||||| |||| |||||||| ||| |||| Sbjct: 148 accacagggaagatataccagtatgttattaacaagg-aacgcaaaggagattacttggg 206 Query: 135 aaaaactgttcaggttgtgccgcacat 161 |||||||| || ||||| || ||||| Sbjct: 207 gaaaactgtacacgttgtccctcacat 233
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 325 cctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttggtgaa 384 ||||| |||||||| ||||| |||||||||||||| |||||||| | || ||||||||| Sbjct: 78521 cctggtaacttttgtttggtgcatgttagtcttgttccagttctgaatgttgttggtgaa 78462 Query: 385 cag 387 ||| Sbjct: 78461 cag 78459 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 226 ccagctgatgtttgtgtcatagaacttgg 254 ||||||||||||||||| ||||||||||| Sbjct: 78832 ccagctgatgtttgtgtgatagaacttgg 78804 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 474 actggaagaaaatgtgaaactgaaactctcacagttttgccaagttccggt 524 |||||||||||||||||| ||||||||| ||||| ||||| || ||||| Sbjct: 78134 actggaagaaaatgtgaaggagaaactctctcagttctgccatgtaccggt 78084 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 386 agaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 ||||||| ||||| || || ||||||||||||||| |||| || |||||| Sbjct: 78320 agaaaactaagccgactcaacatagtgtccgtggattaaggggtcttggg 78271 Score = 42.1 bits (21), Expect = 2.2 Identities = 76/92 (82%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 5 aggtggacttggnatcttggnaaattacgagcggtttttggacatcaagttgacccgcga 64 |||||||||||| ||||||| || ||||||| ||||| | ||||| || | ||| | || Sbjct: 79572 aggtggacttgg-atcttgggaa-ttacgagaggtttcttgacattaaactaaccaggga 79515 Query: 65 caacaacataaccactgggaagatctaccagg 96 ||| || |||||||| || ||||||||||||| Sbjct: 79514 caataatataaccacaggaaagatctaccagg 79483 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 264 aggggacatcgaatcaatgccttttatcgaagcattgggtcaatt 308 |||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 78685 aggggatattgaatctatgccatttatcgaagctttgggccaatt 78641
>gb|L29453.1|CRUCTSY Cricetulus griseus CTP synthetase mRNA, partial cds Length = 1341 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 75 accactgggaagatctaccaggctgttattaacaaggnaacgaaaaggagactacctggg 134 ||||| |||||||| |||||| |||||||||||||| |||| |||||||| ||| |||| Sbjct: 148 accacagggaagatataccagtatgttattaacaagg-aacgcaaaggagattacttggg 206 Query: 135 aaaaactgttcaggttgtgccgcacat 161 |||||||| || ||||| || ||||| Sbjct: 207 gaaaactgtacacgttgtccctcacat 233
>gb|BC044325.1| Xenopus laevis cytidine 5'-triphosphate synthase, mRNA (cDNA clone MGC:52832 IMAGE:4884716), complete cds Length = 2188 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 73 taaccactgggaagatctaccaggctgttattaacaaggnaacgaaaaggagactacctg 132 |||| ||||| || ||||||||| ||||||||||||||| | ||||||| || ||||| Sbjct: 315 taacaactggaaaaatctaccagtctgttattaacaaggaga-gaaaaggcgattacctt 373 Query: 133 ggaaaaactgttcaggttgtgccgcacat 161 |||||||| ||||| ||||| || ||||| Sbjct: 374 ggaaaaacagttcaagttgttcctcacat 402
>emb|CT485693.1| Xenopus tropicalis finished cDNA, clone TEgg031m17 Length = 3634 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/93 (83%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 87 atctaccaggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgttca 146 ||||||||| ||||||||||||||| | ||||||| || ||||| |||||||| ||||| Sbjct: 340 atctaccagtctgttattaacaaggaga-gaaaaggcgattaccttggaaaaaccgttca 398 Query: 147 ggttgtgccgcacattactgatgaaatacaaga 179 ||||| || ||||| || |||| ||| ||||| Sbjct: 399 agttgttcctcacatcacagatgcaatccaaga 431
>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52 Length = 198427 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 ccagctgatgtttgtgtcatagaacttgg 254 ||||||||||||||||||||||||||||| Sbjct: 173703 ccagctgatgtttgtgtcatagaacttgg 173731
>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project) Length = 111945 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 ccagctgatgtttgtgtcatagaacttgg 254 ||||||||||||||||||||||||||||| Sbjct: 106280 ccagctgatgtttgtgtcatagaacttgg 106308
>ref|XM_743895.1| Aspergillus fumigatus Af293 CTP synthase (Afu7g05210) partial mRNA Length = 1746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagatctacca 94 ||||||||||| |||||||||||||||||||| Sbjct: 253 gacaacaacatcaccactgggaagatctacca 284
>gb|AC155884.2| Medicago truncatula chromosome 2 BAC clone mth2-10d10, complete sequence Length = 79222 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 280 atgccttttatcgaagcattgggtcaattttcgtaccgcgtagg 323 ||||||||||| |||||| | ||||||||||| ||||||||||| Sbjct: 55384 atgccttttattgaagcacttggtcaattttcttaccgcgtagg 55427 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 gtaggacctggaaacttttgcttggttcatgttagtcttgt 359 ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 55537 gtaggccctggaaacttttgtttggttcatgtcagccttgt 55577 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 42 ttggacatcaagttgacccgcgacaacaacataaccactgg 82 ||||||||||| |||||||||||||| ||||| || ||||| Sbjct: 54753 ttggacatcaaattgacccgcgacaataacatcactactgg 54793
>ref|NM_102819.2| Arabidopsis thaliana CTP synthase/ catalytic AT1G30820 mRNA, complete cds Length = 2472 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 376 gttggtgaacagaaaacaaagcctacccagcatagtgtc 414 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 896 gttggtgaacagaaaactaagccgacacagcatagtgtc 934 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 118 aaaggagactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaa 177 |||||||| || ||||||| |||||||||||||| || || | ||||||| ||| ||| Sbjct: 638 aaaggagattatttgggaaagactgttcaggttgttcctcatgtcactgatgcaattcaa 697 Query: 178 gactggat 185 || ||||| Sbjct: 698 gattggat 705
>emb|BX813942.1|CNS0AASW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2201 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 376 gttggtgaacagaaaacaaagcctacccagcatagtgtc 414 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 800 gttggtgaacagaaaactaagccgacacagcatagtgtc 838 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 118 aaaggagactacctgggaaaaactgttcaggttgtgccgcacattactgatgaaatacaa 177 |||||||| || ||||||| |||||||||||||| || || | ||||||| ||| ||| Sbjct: 542 aaaggagattatttgggaaagactgttcaggttgttcctcatgtcactgatgcaattcaa 601 Query: 178 gactggat 185 || ||||| Sbjct: 602 gattggat 609
>ref|XM_233467.3| PREDICTED: Rattus norvegicus cytidine 5'-triphosphate synthase (predicted) (Ctps_predicted), mRNA Length = 3596 Score = 50.1 bits (25), Expect = 0.009 Identities = 86/105 (81%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 75 accactgggaagatctaccaggctgttattaacaaggnaacgaaaaggagactacctggg 134 ||||| |||||||| |||||| || |||||||||| | || |||||||| ||| | || Sbjct: 1300 accacagggaagatataccagtacgtcattaacaagg-agcgcaaaggagattacttagg 1358 Query: 135 aaaaactgttcaggttgtgccgcacattactgatgaaatacaaga 179 ||||||||||||||||| || ||||| || |||| ||| ||||| Sbjct: 1359 gaaaactgttcaggttgtccctcacatcacagatgcaattcaaga 1403
>gb|BC084164.1| Xenopus laevis hypothetical LOC495047, mRNA (cDNA clone MGC:79082 IMAGE:5047203), complete cds Length = 4551 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 84 aagatctaccaggctgttattaacaaggnaacgaaaaggagactacctgggaaaaactgt 143 |||||||||||| |||| ||||| |||| | |||| || || ||||| ||||||||||| Sbjct: 375 aagatctaccagtctgtgattaataaggaga-gaaagggtgattaccttggaaaaactgt 433 Query: 144 tcaggttgtgccgcacattactgatgaaatacaaga 179 ||| ||||| || ||||| || |||| ||| ||||| Sbjct: 434 tcaagttgttcctcacatcacagatgcaattcaaga 469
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 121 ggagactacctgggaaaaactgttcaggttgt 152 ||||| ||||||||||||||||||||| |||| Sbjct: 64598 ggagattacctgggaaaaactgttcagattgt 64567
>ref|XM_569392.1| Cryptococcus neoformans var. neoformans JEC21 CTP synthase (CNC00220) partial mRNA Length = 2181 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 121 ggagactacctgggaaaaactgttcaggttgt 152 ||||| ||||||||||||||||||||| |||| Sbjct: 476 ggagattacctgggaaaaactgttcagattgt 507
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence Length = 105768 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Plus Query: 320 taggacctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttg 379 |||||||||| || || |||||||||||||| || ||||| || ||||| | || |||| Sbjct: 4801 taggacctggtaatttctgcttggttcatgtcagccttgtgcctgttctcagtgttgttg 4860 Query: 380 gtgaacag 387 |||||||| Sbjct: 4861 gtgaacag 4868
>dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21 Length = 79125 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 320 taggacctggaaacttttgcttggttcatgttagtcttgtaccagttctaaccgtagttg 379 |||||||||| || || |||||||||||||| || ||||| || ||||| | || |||| Sbjct: 7905 taggacctggtaatttctgcttggttcatgtcagccttgtgcctgttctcagtgttgttg 7846 Query: 380 gtgaacag 387 |||||||| Sbjct: 7845 gtgaacag 7838
>gb|BC003257.1| Mus musculus cytidine 5'-triphosphate synthase 2, mRNA (cDNA clone MGC:5926 IMAGE:3500778), complete cds Length = 2113 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 383 tacctggggaaaactgttcaagttgtcccccatattactgatg 425 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 320 gacaacaacatcaccactgggaagat 345
>ref|NM_018737.2| Mus musculus cytidine 5'-triphosphate synthase 2 (Ctps2), mRNA Length = 3284 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 591 tacctggggaaaactgttcaagttgtcccccatattactgatg 633 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 528 gacaacaacatcaccactgggaagat 553
>ref|XM_537968.2| PREDICTED: Canis familiaris similar to cytidine triphosphate synthase II, transcript variant 1 (LOC480851), mRNA Length = 2172 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 485 tacctgggaaaaacagtacaagttgtcccgcacattaccgatg 527
>ref|XM_852639.1| PREDICTED: Canis familiaris similar to cytidine triphosphate synthase II, transcript variant 6 (LOC480851), mRNA Length = 2193 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 485 tacctgggaaaaacagtacaagttgtcccgcacattaccgatg 527
>ref|XM_852597.1| PREDICTED: Canis familiaris similar to cytidine triphosphate synthase II, transcript variant 5 (LOC480851), mRNA Length = 1890 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 485 tacctgggaaaaacagtacaagttgtcccgcacattaccgatg 527
>ref|XM_852556.1| PREDICTED: Canis familiaris similar to cytidine triphosphate synthase II, transcript variant 4 (LOC480851), mRNA Length = 2169 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 485 tacctgggaaaaacagtacaagttgtcccgcacattaccgatg 527
>dbj|AK150966.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018N24 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 2248 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 542 tacctggggaaaactgttcaagttgtcccccatattactgatg 584 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 479 gacaacaacatcaccactgggaagat 504
>dbj|AK151597.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032A12 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 2248 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 542 tacctggggaaaactgttcaagttgtcccccatattactgatg 584 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 479 gacaacaacatcaccactgggaagat 504
>dbj|AK164206.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630049F24 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3224 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 502 tacctggggaaaactgttcaagttgtcccccatattactgatg 544 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 439 gacaacaacatcaccactgggaagat 464
>dbj|AK161564.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330413O21 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 1666 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 513 tacctggggaaaactgttcaagttgtcccccatattactgatg 555 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 450 gacaacaacatcaccactgggaagat 475
>dbj|AK052854.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830005I19 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3284 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 591 tacctggggaaaactgttcaagttgtcccccatattactgatg 633 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 528 gacaacaacatcaccactgggaagat 553
>dbj|AK084595.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330020A01 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3149 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 472 tacctggggaaaactgttcaagttgtcccccatattactgatg 514 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 409 gacaacaacatcaccactgggaagat 434
>dbj|AK032018.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330547G18 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3100 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 402 tacctggggaaaactgttcaagttgtcccccatattactgatg 444 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 339 gacaacaacatcaccactgggaagat 364
>dbj|AK085381.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630018O13 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3333 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 450 tacctggggaaaactgttcaagttgtcccccatattactgatg 492 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 387 gacaacaacatcaccactgggaagat 412
>dbj|AK102275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D14, full insert sequence Length = 2086 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 226 ccagctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcc 284 |||||||||||||||||||| ||| | || ||||| |||| || || ||||||||||| Sbjct: 477 ccagctgatgtttgtgtcattgaattgggaggcactgtaggtgatattgaatcaatgcc 535
>dbj|AK063965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A03, full insert sequence Length = 2119 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 226 ccagctgatgtttgtgtcatagaacttggtggcaccataggggacatcgaatcaatgcc 284 |||||||||||||||||||| ||| | || ||||| |||| || || ||||||||||| Sbjct: 491 ccagctgatgtttgtgtcattgaattgggaggcactgtaggtgatattgaatcaatgcc 549
>gb|U49385.1|MMU49385 Mus musculus CTP synthetase homolog (CTPsH) mRNA, complete cds Length = 2270 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 127 tacctgggaaaaactgttcaggttgtgccgcacattactgatg 169 |||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 565 tacctggggaaaactgttcaagttgtcccccatattactgatg 607 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 502 gacaacaacatcaccactgggaagat 527
>gb|BC085949.1| Rattus norvegicus cytidine triphosphate synthase II, mRNA (cDNA clone MGC:95203 IMAGE:7132135), complete cds Length = 2153 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 343 gacaacaacatcaccactgggaagat 368
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 167 atgaaatacaagactggattgaacgtgtggcgatgaatccggttgatggc 216 |||| |||||||| |||||||| ||||| ||||| ||||||||||||| Sbjct: 106490 atgagatacaagattggattgagcgtgtcgcgatagttccggttgatggc 106539
>gb|BC074125.1| Xenopus laevis MGC81822 protein, mRNA (cDNA clone MGC:81822 IMAGE:7008060), complete cds Length = 3699 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 66 aacaacataaccactgggaagatctaccag 95 |||||||| |||||||| |||||||||||| Sbjct: 707 aacaacattaccactggaaagatctaccag 736
>ref|XM_322346.1| Neurospora crassa OR74A hypothetical protein (NCU00261.1) partial mRNA Length = 1707 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 58 cccgcgacaacaacataaccactgggaagatctaccag 95 |||||||||||||||| ||||| || ||| |||||||| Sbjct: 215 cccgcgacaacaacatcaccaccggcaaggtctaccag 252
>ref|XM_952639.1| Neurospora crassa OR74A hypothetical protein (NCU00261.1) partial mRNA Length = 1707 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 58 cccgcgacaacaacataaccactgggaagatctaccag 95 |||||||||||||||| ||||| || ||| |||||||| Sbjct: 215 cccgcgacaacaacatcaccaccggcaaggtctaccag 252
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 388 aaaacaaagcctacccagcatagtgt 413 ||||| |||||||||||||||||||| Sbjct: 1090619 aaaaccaagcctacccagcatagtgt 1090594
>gb|AC103363.6| Mus musculus chromosome 17, clone RP24-247H9, complete sequence Length = 222909 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 aacagaaaacaaagcctaccca 404 |||||||||||||||||||||| Sbjct: 157583 aacagaaaacaaagcctaccca 157604
>gb|AC122168.14| Medicago truncatula clone mth2-4o4, complete sequence Length = 120886 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 496 aaactctcacagttttgccaagttcc 521 |||||||||||||||||||| ||||| Sbjct: 89315 aaactctcacagttttgccatgttcc 89290 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 118 aaaggagactacctgggaaaaactgttcaggt 149 |||||||| || || ||||||||||||||||| Sbjct: 92182 aaaggagattatctcggaaaaactgttcaggt 92151
>emb|AL391730.13| Human DNA sequence from clone RP11-348A7 on chromosome 1 Contains a protein phosphatase 2 (formerly 2A) catalytic subunit alpha isoform (PPP2CA) pseudogene, a pseudogene similar to part of ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1), the CTPS gene for CTP synthase, the gene for a novel protein (FLJ40290), the 3' end of the SCMH1 gene for sex comb on midleg homolog 1 (Drosophila) and a CpG island, complete sequence Length = 98692 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 57747 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 57800
>gb|AC132213.1| Drosophila pseudoobscura FOSMID DPSF1-548A8 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 38490 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 63 gacaacaacataaccactgggaagatctac 92 ||||||||||||||||| || ||||||||| Sbjct: 24806 gacaacaacataaccacaggcaagatctac 24777
>gb|BC009408.1| Homo sapiens CTP synthase, mRNA (cDNA clone MGC:10396 IMAGE:3355881), complete cds Length = 2860 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 722 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 775
>emb|CR602579.1| full-length cDNA clone CS0DJ010YB12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1902 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 704 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 757
>ref|NM_001034998.1| Rattus norvegicus cytidine triphosphate synthase II (Ctps2), mRNA Length = 2153 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 343 gacaacaacatcaccactgggaagat 368
>dbj|AK130549.1| Homo sapiens cDNA FLJ27039 fis, clone SLV08494, highly similar to CTP synthase (EC 6.3.4.2) Length = 2037 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 701 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 754
>ref|NM_001905.1| Homo sapiens CTP synthase (CTPS), mRNA Length = 2758 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 646 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 699
>dbj|AB076254.1| Gibberella fujikuroi Gfpho5 gene, GfTri101 pseudogene, Gfscs pseudogene, Gfura7 gene, partial and complete cds Length = 8435 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 54 ttgacccgcgacaacaacataaccactgggaagatctaccag 95 |||| ||| |||| |||||| |||||||| |||||||||||| Sbjct: 7790 ttgagccgtgacagcaacatcaccactggcaagatctaccag 7831
>dbj|AB076253.1| Fusarium oxysporum Fopho5 gene, FoTri101 pseudogene, Foscs pseudogene, Foura7 gene, partial and complete cds Length = 8856 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 54 ttgacccgcgacaacaacataaccactgggaagatctaccag 95 |||| ||| |||| |||||| |||||||| |||||||||||| Sbjct: 8219 ttgagccgtgacagcaacatcaccactggcaagatctaccag 8260
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 aacagaaaacaaagcctaccca 404 |||||||||||||||||||||| Sbjct: 24631 aacagaaaacaaagcctaccca 24652
>emb|AL807822.7| Mouse DNA sequence from clone RP23-31A20 on chromosome X, complete sequence Length = 116719 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gacaacaacataaccactgggaagat 88 ||||||||||| |||||||||||||| Sbjct: 76912 gacaacaacatcaccactgggaagat 76937
>emb|X52142.1|HSCTPSYN Human mRNA for CTP synthetase (EC 6.3.4.2) Length = 2758 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgtccgtggactaagaggacttggg 435 |||||||| || || ||||||||| ||||||| || | ||| |||||||||||| Sbjct: 646 gaacagaagactaaacctacccagaatagtgttcgggaacttagaggacttggg 699
>emb|AL773583.9| Mouse DNA sequence from clone RP23-384O2 on chromosome X, complete sequence Length = 131402 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 aacaaagcctacccagcatagt 411 |||||||||||||||||||||| Sbjct: 62212 aacaaagcctacccagcatagt 62191
>gb|AF040661.4| Caenorhabditis elegans cosmid W10G11, complete sequence Length = 37527 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 607 attttgaaggttctgggcctttggt 631 |||||| |||||||||||||||||| Sbjct: 11004 attttgtaggttctgggcctttggt 11028
>gb|AE013201.1| Thermoanaerobacter tengcongensis MB4, section 228 of 244 of the complete genome Length = 13309 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 139 actgttcaggttgtgccgcacattactgatgaaatacaaga 179 ||||||||||| | || |||||||||||||||||| |||| Sbjct: 2152 actgttcaggtaataccccacattactgatgaaataaaaga 2112 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 ggtgaacagaaaacaaagcctacccagca 407 ||||||| ||||||||||||||| ||||| Sbjct: 1930 ggtgaactgaaaacaaagcctacacagca 1902
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 tactcagccactggaagaaaa 485 ||||||||||||||||||||| Sbjct: 480111 tactcagccactggaagaaaa 480131
>emb|BX957221.1| Methanococcus maripaludis S2 complete genome; segment 3/5 Length = 348230 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 116 gaaaaggagactacctgggaaaaactgttcaggttgtgccgcacattac 164 |||||||||| || || |||||||| |||||||| | ||||||||||| Sbjct: 190585 gaaaaggagattatcttggaaaaacggttcaggtaattccgcacattac 190633
>gb|AC067942.6| Homo sapiens BAC clone RP11-791G16 from 4, complete sequence Length = 187399 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 gaagaaaatgtgaaactgaaa 498 ||||||||||||||||||||| Sbjct: 107347 gaagaaaatgtgaaactgaaa 107367
>ref|NM_062174.2| Caenorhabditis elegans W10G11.2 (W10G11.2) mRNA, complete cds Length = 558 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 607 attttgaaggttctgggcctttggt 631 |||||| |||||||||||||||||| Sbjct: 97 attttgtaggttctgggcctttggt 73
>gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212483 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 ttttgaaggttctgggccttt 628 ||||||||||||||||||||| Sbjct: 86020 ttttgaaggttctgggccttt 86040
>ref|XM_625276.1| PREDICTED: Apis mellifera hypothetical protein LOC552171 (LOC552171), mRNA Length = 872 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ctgatgtttgtgtcatagaac 250 ||||||||||||||||||||| Sbjct: 678 ctgatgtttgtgtcatagaac 658
>ref|NM_129042.1| Arabidopsis thaliana CTP synthase/ catalytic AT2G34890 mRNA, complete cds Length = 1794 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 559 atctggcacatccctttgttgctcagggatcagagagcccatgaagctattt 610 ||||||||||| ||| ||||||||| ||| |||| || |||||||| |||| Sbjct: 748 atctggcacattcctctgttgctcaaggagcagaaggctcatgaagcaattt 799 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gttggtgaacagaaaacaaa 395 |||||||||||||||||||| Sbjct: 565 gttggtgaacagaaaacaaa 584
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 aggagactacctgggaaaaactgttcag 147 |||||||||||| |||||||| |||||| Sbjct: 4512395 aggagactacctcggaaaaaccgttcag 4512368
>gb|AC024837.1| Caenorhabditis elegans cosmid Y59E1B, complete sequence Length = 20580 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gaaaatgtgaaactgaaact 500 |||||||||||||||||||| Sbjct: 8384 gaaaatgtgaaactgaaact 8365
>emb|CR788305.17| Zebrafish DNA sequence from clone DKEYP-59G5 in linkage group 20, complete sequence Length = 187351 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 aagccagctgatgtttgtgt 242 |||||||||||||||||||| Sbjct: 170710 aagccagctgatgtttgtgt 170729
>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete sequence Length = 254449 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgt 413 |||||||||||||| ||||| || |||||||| Sbjct: 151075 gaacagaaaacaaaacctacacaacatagtgt 151106
>ref|XM_786061.1| PREDICTED: Strongylocentrotus purpuratus similar to cytidine triphosphate synthase II (LOC586273), partial mRNA Length = 696 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 118 aaaggagactacctgggaaaaactgttcaggttgtgccgcacat 161 |||||||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 565 aaaggagactaccttggaaagactgtacaagttgtccctcacat 608
>emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in linkage group 3, complete sequence Length = 154312 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aagccagctgatgtttgtgt 242 |||||||||||||||||||| Sbjct: 26670 aagccagctgatgtttgtgt 26651
>emb|AL844599.4| Mouse DNA sequence from clone RP24-129L11 on chromosome 4, complete sequence Length = 47235 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gaaaatgtgaaactgaaact 500 |||||||||||||||||||| Sbjct: 14189 gaaaatgtgaaactgaaact 14170
>gb|AC091836.2| Homo sapiens chromosome 5 clone CTD-2060B6, complete sequence Length = 169695 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 atccctttgttgctcaggga 587 |||||||||||||||||||| Sbjct: 123251 atccctttgttgctcaggga 123232
>gb|AC034242.6| Homo sapiens chromosome 5 clone CTD-2514M18, complete sequence Length = 221452 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 atccctttgttgctcaggga 587 |||||||||||||||||||| Sbjct: 210272 atccctttgttgctcaggga 210291
>gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosome 12, complete sequence Length = 200939 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 atgatgtaacaaatatctgg 564 |||||||||||||||||||| Sbjct: 142563 atgatgtaacaaatatctgg 142544
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccagctgatgtttgtgtcat 245 |||||||||||||||||||| Sbjct: 22694491 ccagctgatgtttgtgtcat 22694472
>gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175768 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 cactggaagaaaatgtgaaa 492 |||||||||||||||||||| Sbjct: 70612 cactggaagaaaatgtgaaa 70631
>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence Length = 131359 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 atgccgcagtactcagccac 475 |||||||||||||||||||| Sbjct: 22797 atgccgcagtactcagccac 22816
>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3, complete sequence Length = 227111 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 aagccagctgatgtttgtgt 242 |||||||||||||||||||| Sbjct: 187632 aagccagctgatgtttgtgt 187651
>gb|AC155899.3| Loxodonta africana, clone Loxodonta africana-4339375L1, complete sequence Length = 37722 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 cttgggttgatgcctgatat 449 |||||||||||||||||||| Sbjct: 1016 cttgggttgatgcctgatat 997
>gb|U51645.1|PFU51645 Plasmodium falciparum cytidine triphosphate synthetase gene, complete cds Length = 2583 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 gaacagaaaacaaagcctacccagcatagtgt 413 |||||||||||||| ||||| || |||||||| Sbjct: 631 gaacagaaaacaaaacctacacaacatagtgt 662
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccagctgatgtttgtgtcat 245 |||||||||||||||||||| Sbjct: 22622682 ccagctgatgtttgtgtcat 22622663
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccagctgatgtttgtgtcat 245 |||||||||||||||||||| Sbjct: 6341 ccagctgatgtttgtgtcat 6322
>emb|AL929017.9| Zebrafish DNA sequence from clone DKEY-4C15 in linkage group 20, complete sequence Length = 208922 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 gtgaaactgaaactctcaca 506 |||||||||||||||||||| Sbjct: 80733 gtgaaactgaaactctcaca 80714
>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete sequence Length = 213294 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 atgatgtaacaaatatctgg 564 |||||||||||||||||||| Sbjct: 152433 atgatgtaacaaatatctgg 152452 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,228,454 Number of Sequences: 3902068 Number of extensions: 5228454 Number of successful extensions: 100973 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100517 Number of HSP's gapped (non-prelim): 443 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
