ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF475117.1| Triticum aestivum DNA topoisomerase II inhibitor ... 587 e-164
2gb|BT016200.1| Zea mays clone Contig33 mRNA sequence 167 5e-38
3gb|BT024080.1| Zea mays clone EL01N0527F08 mRNA sequence 167 5e-38
4dbj|AK102656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 9e-37
5gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, ... 133 8e-28
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
10emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 125 2e-25
11emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 125 2e-25
12ref|NM_126052.1| Arabidopsis thaliana unknown protein AT5G66540 ... 58 4e-05
13gb|AY149928.1| Arabidopsis thaliana At5g66540/K1F13_21 mRNA, com... 58 4e-05
14gb|AF389279.1|AF389279 Arabidopsis thaliana AT5g66540/K1F13_21 m... 58 4e-05
15dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 4e-05
16gb|AC156598.2| Laccaria bicolor clone JGIAHZW-2X, complete sequence 44 0.55
17gb|BC090000.1| Rattus norvegicus similar to RIKEN cDNA 1200007B0... 44 0.55
18gb|DQ174241.1| Echinococcus granulosus clone EgB3G6v10 antigen B... 42 2.2
19gb|AY321285.1| Echinococcus granulosus clone EgCerv-9 antigen B ... 42 2.2
20gb|AY321284.1| Echinococcus granulosus clone EgCerv-8 antigen B ... 42 2.2
21gb|AY321283.1| Echinococcus granulosus clone EgCerv-7 antigen B ... 42 2.2
22gb|AY321282.1| Echinococcus granulosus clone EgCerv-2 antigen B ... 42 2.2
23gb|DQ137843.1| Echinococcus granulosus clone EgB3G6v14 antigen B... 42 2.2
24gb|DQ137840.1| Echinococcus granulosus clone EgB3G7v10 antigen B... 42 2.2
25gb|DQ137839.1| Echinococcus granulosus clone EgB3G7v9 antigen B ... 42 2.2
26gb|DQ137838.1| Echinococcus granulosus clone EgB3G7v8 antigen B ... 42 2.2
27gb|DQ137837.1| Echinococcus granulosus clone EgB3G7v7 antigen B ... 42 2.2
28gb|AC122371.4| Mus musculus BAC clone RP23-459C10 from chromosom... 42 2.2
29dbj|AB220522.1| Macaca fascicularis mRNA, clone QnpA-18490: simi... 42 2.2
30gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, co... 42 2.2
31emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chrom... 42 2.2
32gb|L22090.1|RABEIF4G Rabbit initiation factor 4-gamma (eIF-4G) m... 42 2.2
33gb|AC158208.2| Physcomitrella patens clone JGIASYB-1A9, complete... 40 8.5
34gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complet... 40 8.5
35gb|AC149789.1| Pan troglodytes BAC clone CH251-56H2 from Y, comp... 40 8.5
36gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 8.5
37gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, co... 40 8.5
38gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom... 40 8.5
39emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chr... 40 8.5
40gb|AE014258.1| Streptococcus agalactiae 2603V/R section 68 of 10... 40 8.5
41emb|AL766851.1|SAG766851 Streptococcus agalactiae NEM316 complet... 40 8.5
42emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 m... 40 8.5
43dbj|BS000587.2| Pan troglodytes chromosome Y clone:PTB-490L20, c... 40 8.5
44gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.5
45gb|AC079173.33| Homo sapiens Xp BAC RP11-323P4 (Roswell Park Can... 40 8.5
46emb|AL954383.13| Zebrafish DNA sequence from clone CH211-226M11 ... 40 8.5
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
48gb|AC146271.2| Pan troglodytes BAC clone CH251-26F19 from chromo... 40 8.5
49gb|AC010879.2|AC010879 Homo sapiens BAC clone RP11-235I1 from Y,... 40 8.5
50ref|XM_218663.3| PREDICTED: Rattus norvegicus similar to KIAA135... 40 8.5
51dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
52emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 40 8.5
53gb|AC124095.7| Mus musculus chromosome 1, clone RP23-245G9, comp... 40 8.5
54gb|U72333.1|HSLIS01 Human platelet activating factor acetylhydro... 40 8.5
55emb|BX322559.1|HSQ1L4 Homo sapiens chromosome 21 from cosmid LL2... 40 8.5
56dbj|AB032402.1| Mus musculus BSP gene for brain serine protease,... 40 8.5
57gb|AC169127.3| Mus musculus BAC clone RP24-493G21 from chromosom... 40 8.5 
>gb|AF475117.1| Triticum aestivum DNA topoisomerase II inhibitor mRNA, partial cds
          Length = 645

 Score =  587 bits (296), Expect = e-164
 Identities = 368/395 (93%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgaagagggtgcagggaaatccggcggagatctaaagtacgatgannnnnnnaaggaaa 284
           |||||||||||||||||||||||||||||||||||||||| || ||        ||||||
Sbjct: 233 atgaagagggtgcagggaaatccggcggagatctaaagtatgaggatttttttgaggaaa 292

                                                                       
Query: 285 gccgtaagcaacaagtcaagaagagtaatggttccacaaagaaagtccacttcaaggatg 344
           ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 293 gccgtaagcaacaagtcaagaagagaaatggtttcacaaagaaagtccacttcaaggatg 352

                                                                       
Query: 345 aattgcatgaaatggaagtggatgacattgagaaggatgatgtaaatgatggtccagcgt 404
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 353 aattgcatgaaatggaagtggatgacattgagaaggatgatgtaaatgatggtccagcat 412

                                                                       
Query: 405 tagaggatgaacaaggtctttcaactcatgaaaaggagctcttgaagatacgtagccaaa 464
           |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 413 tagaggatgaacaaggtctttcaactcatgaaaaggggctcttgaagatgcgtaaccaaa 472

                                                                       
Query: 465 tagatctaatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggtta 524
           |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| 
Sbjct: 473 tagacctaatggagaaagctagtcttgaacccagtaaatggatcatgcagggagaggttg 532

                                                                       
Query: 525 gtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagcataatg 584
            ||||||||  | ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atgcttccangatgcccaaaaatagtgccctggaagtggatcttgattttgagcataatg 592

                                              
Query: 585 taagacctgctccagtaatcacggaggaagtcaca 619
           |||||||||| |||| |||||||||||||||||||
Sbjct: 593 taagacctgccccagnaatcacggaggaagtcaca 627



 Score =  141 bits (71), Expect = 3e-30
 Identities = 114/128 (89%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggcgangcagggnaacgggttggaggacaggttcctgnanntggntgagctggaagna 60
           ||||||| ||||||||||||| ||||||||||||||||| |  ||   || ||||||  |
Sbjct: 1   ggggcgaagcagggnaacggggtggaggacaggttcctgaatatgaaggacctggaa-aa 59

                                                                       
Query: 61  gtttatggaggagggggaggagcaagagtacggtgggggttccaagcgaggagagaagaa 120
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 60  gtttatggaggagggggaggagcaggagtacggtgggggttccaagggaggagagaagaa 119

                   
Query: 121 gaaggcaa 128
            |||||||
Sbjct: 120 aaaggcaa 127
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>gb|BT016200.1| Zea mays clone Contig33 mRNA sequence
          Length = 1196

 Score =  167 bits (84), Expect = 5e-38
 Identities = 180/212 (84%)
 Strand = Plus / Minus

                                                                       
Query: 413 gaacaaggtctttcaactcatgaaaaggagctcttgaagatacgtagccaaatagatcta 472
           ||||| ||||| |||||||| ||||||||||   ||||||| ||||   ||||||| | |
Sbjct: 926 gaacatggtctctcaactcacgaaaaggagcgtctgaagatgcgtactaaaatagagcaa 867

                                                                       
Query: 473 atggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggttagtgcttcc 532
           ||||||||||||| |||||||||||| |  |||| |||| | |||||||||| |||||| 
Sbjct: 866 atggagaaagctaatcttgaacccagcacgtggaccatgcagggagaggttactgcttct 807

                                                                       
Query: 533 agcaggcccagaaatagtgccctggaagtggatcttgattttgagcataatgtaagacct 592
           || ||||||| ||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 806 aggaggcccaaaaacagtgccctagaagtggaccttgattttgagcacaatgtaagacct 747

                                           
Query: 593 gctccagtaatcacggaggaagtcacagcttc 624
           || || ||||| || |||||||| ||||||||
Sbjct: 746 gcccctgtaataaccgaggaagtgacagcttc 715



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                        
Query: 302  aagaagagtaatggttccacaaagaaagtccacttcaaggatgaattgcatgaaatggaa 361
            ||||||||  ||||||||||||||||||| || || || | ||||   |||||| | |||
Sbjct: 1025 aagaagagagatggttccacaaagaaagttcaatttaatgctgaagcacatgaagttgaa 966

                                              
Query: 362  gtggatgacattgagaaggatgatgtaaatgatg 395
             |  |||||| |||||| ||||||| ||||||||
Sbjct: 965  ctccatgacagtgagaatgatgatggaaatgatg 932
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>gb|BT024080.1| Zea mays clone EL01N0527F08 mRNA sequence
          Length = 2180

 Score =  167 bits (84), Expect = 5e-38
 Identities = 180/212 (84%)
 Strand = Plus / Plus

                                                                        
Query: 413  gaacaaggtctttcaactcatgaaaaggagctcttgaagatacgtagccaaatagatcta 472
            ||||| ||||| |||||||| ||||||||||   ||||||| ||||   ||||||| | |
Sbjct: 1254 gaacatggtctctcaactcacgaaaaggagcgtctgaagatgcgtactaaaatagagcaa 1313

                                                                        
Query: 473  atggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggttagtgcttcc 532
            ||||||||||||| |||||||||||| |  |||| |||| | |||||||||| |||||| 
Sbjct: 1314 atggagaaagctaatcttgaacccagcacgtggaccatgcagggagaggttactgcttct 1373

                                                                        
Query: 533  agcaggcccagaaatagtgccctggaagtggatcttgattttgagcataatgtaagacct 592
            || ||||||| ||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1374 aggaggcccaaaaacagtgccctagaagtggaccttgattttgagcacaatgtaagacct 1433

                                            
Query: 593  gctccagtaatcacggaggaagtcacagcttc 624
            || || ||||| || |||||||| ||||||||
Sbjct: 1434 gcccctgtaataaccgaggaagtgacagcttc 1465



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                        
Query: 302  aagaagagtaatggttccacaaagaaagtccacttcaaggatgaattgcatgaaatggaa 361
            ||||||||  ||||||||||||||||||| || ||||||||||||   |||||| | |||
Sbjct: 1155 aagaagagagatggttccacaaagaaagttcaattcaaggatgaagcacatgaagttgaa 1214

                                              
Query: 362  gtggatgacattgagaaggatgatgtaaatgatg 395
             |  |||||| |||||| ||||||| ||||||||
Sbjct: 1215 ctccatgacagtgagaatgatgatggaaatgatg 1248
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>dbj|AK102656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101H09, full
            insert sequence
          Length = 2126

 Score =  163 bits (82), Expect = 9e-37
 Identities = 136/154 (88%)
 Strand = Plus / Plus

                                                                        
Query: 472  aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggttagtgcttc 531
            |||||||||||||| ||||||||| ||||  |||| |||| | |||||||||| ||||||
Sbjct: 1026 aatggagaaagctaatcttgaacctagtatgtggaccatgcagggagaggttaatgcttc 1085

                                                                        
Query: 532  cagcaggcccagaaatagtgccctggaagtggatcttgattttgagcataatgtaagacc 591
            |||||| |||| ||| ||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 1086 cagcagacccaaaaacagtgctctagaagtggaccttgattttgagcacaatgtaagacc 1145

                                              
Query: 592  tgctccagtaatcacggaggaagtcacagcttct 625
            ||| ||||||||||| ||||||||||| ||||||
Sbjct: 1146 tgccccagtaatcactgaggaagtcactgcttct 1179
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>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score =  133 bits (67), Expect = 8e-28
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                         
Query: 519   aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
             |||||| |||||||||||| |||| ||||||||| || |||||||| |||||||||||||
Sbjct: 67276 aggttaatgcttccagcagacccaaaaatagtgctctagaagtggaccttgattttgagc 67217

                                                            
Query: 579   ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
             | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 67216 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 67170



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 472   aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
             |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 67445 aatggagaaagctaatcttgaacctagtacgtggaccatgcagggagaggt 67395
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 8e-28
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                           
Query: 519     aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
               |||||| |||||||||||| |||| ||||||||| || |||||||| |||||||||||||
Sbjct: 1712269 aggttaatgcttccagcagacccaaaaatagtgctctagaagtggaccttgattttgagc 1712210

                                                              
Query: 579     ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
               | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1712209 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 1712163



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 472     aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
               |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 1712438 aatggagaaagctaatcttgaacctagtacgtggaccatgcagggagaggt 1712388
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 8e-28
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                           
Query: 519     aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
               |||||| |||||||||||| |||| ||||||||| || |||||||| |||||||||||||
Sbjct: 1709990 aggttaatgcttccagcagacccaaaaatagtgctctagaagtggaccttgattttgagc 1709931

                                                              
Query: 579     ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
               | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1709930 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 1709884



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 472     aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
               |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 1710159 aatggagaaagctaatcttgaacctagtacgtggaccatgcagggagaggt 1710109
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                           
Query: 519     aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
               |||||| |||||||||||| |||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 1665396 aggttaatgcttccagcagacccaaaaacagtgctctagaagtggaccttgattttgagc 1665337

                                                              
Query: 579     ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
               | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1665336 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 1665290



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 472     aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
               |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 1665566 aatggagaaagctaatcttgaacctagtatgtggaccatgcagggagaggt 1665516
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                           
Query: 519     aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
               |||||| |||||||||||| |||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 1665376 aggttaatgcttccagcagacccaaaaacagtgctctagaagtggaccttgattttgagc 1665317

                                                              
Query: 579     ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
               | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1665316 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 1665270



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 472     aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
               |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 1665546 aatggagaaagctaatcttgaacctagtatgtggaccatgcagggagaggt 1665496
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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 104307

 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Plus

                                                                          
Query: 519    aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
              |||||| |||||||||||| |||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 101525 aggttaatgcttccagcagacccaaaaacagtgctctagaagtggaccttgattttgagc 101584

                                                             
Query: 579    ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
              | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 101585 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 101631



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 472    aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
              |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 101355 aatggagaaagctaatcttgaacctagtatgtggaccatgcagggagaggt 101405
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>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Plus

                                                                         
Query: 519   aggttagtgcttccagcaggcccagaaatagtgccctggaagtggatcttgattttgagc 578
             |||||| |||||||||||| |||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 27528 aggttaatgcttccagcagacccaaaaacagtgctctagaagtggaccttgattttgagc 27587

                                                            
Query: 579   ataatgtaagacctgctccagtaatcacggaggaagtcacagcttct 625
             | |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 27588 acaatgtaagacctgccccagtaatcactgaggaagtcactgcttct 27634



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 472   aatggagaaagctagtcttgaacccagtaaatggatcatgaacggagaggt 522
             |||||||||||||| ||||||||| ||||  |||| |||| | ||||||||
Sbjct: 27358 aatggagaaagctaatcttgaacctagtatgtggaccatgcagggagaggt 27408
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>ref|NM_126052.1| Arabidopsis thaliana unknown protein AT5G66540 mRNA, complete cds
          Length = 1917

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 545  aatagtgccctggaagtggatcttgattttgagcataatgtaagacctgctccagtaatc 604
            |||||||| || ||||| ||| | ||||||||||| ||||  || |||||||| ||||||
Sbjct: 1075 aatagtgctctagaagttgatttagattttgagcacaatgccaggcctgctcctgtaatc 1134

                             
Query: 605  acggaggaagtcacagc 621
            || || |||||||||||
Sbjct: 1135 acagaagaagtcacagc 1151
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>gb|AY149928.1| Arabidopsis thaliana At5g66540/K1F13_21 mRNA, complete cds
          Length = 1575

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 545  aatagtgccctggaagtggatcttgattttgagcataatgtaagacctgctccagtaatc 604
            |||||||| || ||||| ||| | ||||||||||| ||||  || |||||||| ||||||
Sbjct: 958  aatagtgctctagaagttgatttagattttgagcacaatgccaggcctgctcctgtaatc 1017

                             
Query: 605  acggaggaagtcacagc 621
            || || |||||||||||
Sbjct: 1018 acagaagaagtcacagc 1034
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>gb|AF389279.1|AF389279 Arabidopsis thaliana AT5g66540/K1F13_21 mRNA, complete cds
          Length = 1918

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 545  aatagtgccctggaagtggatcttgattttgagcataatgtaagacctgctccagtaatc 604
            |||||||| || ||||| ||| | ||||||||||| ||||  || |||||||| ||||||
Sbjct: 1075 aatagtgctctagaagttgatttagattttgagcacaatgccaggcctgctcctgtaatc 1134

                             
Query: 605  acggaggaagtcacagc 621
            || || |||||||||||
Sbjct: 1135 acagaagaagtcacagc 1151
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>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13
          Length = 83511

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 545   aatagtgccctggaagtggatcttgattttgagcataatgtaagacctgctccagtaatc 604
             |||||||| || ||||| ||| | ||||||||||| ||||  || |||||||| ||||||
Sbjct: 46877 aatagtgctctagaagttgatttagattttgagcacaatgccaggcctgctcctgtaatc 46818

                              
Query: 605   acggaggaagtcacagc 621
             || || |||||||||||
Sbjct: 46817 acagaagaagtcacagc 46801
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>gb|AC156598.2| Laccaria bicolor clone JGIAHZW-2X, complete sequence
          Length = 37106

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 360  aagtggatgacattgagaagga 381
            ||||||||||||||||||||||
Sbjct: 1594 aagtggatgacattgagaagga 1615
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>gb|BC090000.1| Rattus norvegicus similar to RIKEN cDNA 1200007B05 gene, mRNA (cDNA
            clone IMAGE:7321709), partial cds
          Length = 2401

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 62   tttatggaggagggggaggagc 83
            ||||||||||||||||||||||
Sbjct: 1941 tttatggaggagggggaggagc 1962
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>gb|DQ174241.1| Echinococcus granulosus clone EgB3G6v10 antigen B subunit 3 gene,
           partial cds
          Length = 445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|AY321285.1| Echinococcus granulosus clone EgCerv-9 antigen B subunit 1 gene,
           partial cds
          Length = 393

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 111 gaggagggggaggagcaagag 91
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>gb|AY321284.1| Echinococcus granulosus clone EgCerv-8 antigen B subunit 1 gene,
           partial cds
          Length = 408

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 111 gaggagggggaggagcaagag 91
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>gb|AY321283.1| Echinococcus granulosus clone EgCerv-7 antigen B subunit 1 gene,
           partial cds
          Length = 393

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 111 gaggagggggaggagcaagag 91
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>gb|AY321282.1| Echinococcus granulosus clone EgCerv-2 antigen B subunit 1 gene,
           partial cds
          Length = 406

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 111 gaggagggggaggagcaagag 91
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>gb|DQ137843.1| Echinococcus granulosus clone EgB3G6v14 antigen B subunit 3 gene,
           partial cds
          Length = 439

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|DQ137840.1| Echinococcus granulosus clone EgB3G7v10 antigen B subunit 3 gene,
           partial cds
          Length = 445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|DQ137839.1| Echinococcus granulosus clone EgB3G7v9 antigen B subunit 3 gene,
           partial cds
          Length = 445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|DQ137838.1| Echinococcus granulosus clone EgB3G7v8 antigen B subunit 3 gene,
           partial cds
          Length = 442

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|DQ137837.1| Echinococcus granulosus clone EgB3G7v7 antigen B subunit 3 gene,
           partial cds
          Length = 442

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 131 gaggagggggaggagcaagag 111
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>gb|AC122371.4| Mus musculus BAC clone RP23-459C10 from chromosome 13, complete sequence
          Length = 177577

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     atggaggagggggaggagcaa 85
              |||||||||||||||||||||
Sbjct: 150691 atggaggagggggaggagcaa 150711
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>dbj|AB220522.1| Macaca fascicularis mRNA, clone QnpA-18490: similar to Homo sapiens
           clathrin, light polypeptide (Lca) (CLTA), transcript
           variant nonbrain, mRNA, NM_001833.1
          Length = 761

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gaggagggggaggagcaagag 88
           |||||||||||||||||||||
Sbjct: 593 gaggagggggaggagcaagag 613
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>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence
          Length = 180157

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   agcgaggagagaagaagaagg 125
             |||||||||||||||||||||
Sbjct: 47962 agcgaggagagaagaagaagg 47982
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>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete
              sequence
          Length = 218815

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 66     tggaggagggggaggagcaagagta 90
              ||||||||||||||||| |||||||
Sbjct: 176042 tggaggagggggaggaggaagagta 176066
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>gb|L22090.1|RABEIF4G Rabbit initiation factor 4-gamma (eIF-4G) mRNA, complete cds
          Length = 4690

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 66  tggaggagggggaggagcaag 86
           |||||||||||||||||||||
Sbjct: 623 tggaggagggggaggagcaag 603
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>gb|AC158208.2| Physcomitrella patens clone JGIASYB-1A9, complete sequence
          Length = 38977

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    atggaggagggggaggagca 84
             ||||||||||||||||||||
Sbjct: 20619 atggaggagggggaggagca 20638
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>gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complete sequence
          Length = 187392

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 555   tggaagtggatcttgatttt 574
             ||||||||||||||||||||
Sbjct: 71820 tggaagtggatcttgatttt 71801
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>gb|AC149789.1| Pan troglodytes BAC clone CH251-56H2 from Y, complete sequence
          Length = 172440

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    gatgacattgagaaggatga 384
              ||||||||||||||||||||
Sbjct: 130091 gatgacattgagaaggatga 130110
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     agtcaagaagagtaatggtt 317
               ||||||||||||||||||||
Sbjct: 1476584 agtcaagaagagtaatggtt 1476565
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>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence
          Length = 233077

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     ggaggagggggaggagcaag 86
              ||||||||||||||||||||
Sbjct: 187688 ggaggagggggaggagcaag 187707
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>gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosome 7, complete sequence
          Length = 214282

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    ggaggagggggaggagcaagagta 90
             ||||||||||||| ||||||||||
Sbjct: 21538 ggaggagggggagaagcaagagta 21515
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>emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chromosome 9 Contains the 5'
              end of the GNA14 gene for guanine nucleotide binding
              protein (G protein) alpha 14, the 3' end of the GNAQ gene
              for guanine nucleotide binding protein (G protein) q
              polypeptide and two CpG islands, complete sequence
          Length = 186658

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     ggaggagggggaggagcaagagta 90
              |||||||||||||||| |||||||
Sbjct: 125496 ggaggagggggaggagaaagagta 125473
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>gb|AE014258.1| Streptococcus agalactiae 2603V/R section 68 of 100 of the complete
             genome
          Length = 20878

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   agtcaagaagagtaatggtt 317
             ||||||||||||||||||||
Sbjct: 13066 agtcaagaagagtaatggtt 13047
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>emb|AL766851.1|SAG766851 Streptococcus agalactiae NEM316 complete genome, segment 9
          Length = 113050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   agtcaagaagagtaatggtt 317
             ||||||||||||||||||||
Sbjct: 69483 agtcaagaagagtaatggtt 69464
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>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete
              sequence
          Length = 180777

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     atggaggagggggaggagca 84
              ||||||||||||||||||||
Sbjct: 168145 atggaggagggggaggagca 168164



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     atggaggagggggaggagca 84
              ||||||||||||||||||||
Sbjct: 168105 atggaggagggggaggagca 168124



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     atggaggagggggaggagca 84
              ||||||||||||||||||||
Sbjct: 168025 atggaggagggggaggagca 168044



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     atggaggagggggaggagca 84
              ||||||||||||||||||||
Sbjct: 167984 atggaggagggggaggagca 168003
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>dbj|BS000587.2| Pan troglodytes chromosome Y clone:PTB-490L20, complete sequence
          Length = 161137

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   gatgacattgagaaggatga 384
             ||||||||||||||||||||
Sbjct: 46516 gatgacattgagaaggatga 46535
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 365      gatgacattgagaaggatga 384
                ||||||||||||||||||||
Sbjct: 20709053 gatgacattgagaaggatga 20709034
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>gb|AC079173.33| Homo sapiens Xp BAC RP11-323P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   gatgacattgagaaggatga 384
             ||||||||||||||||||||
Sbjct: 47608 gatgacattgagaaggatga 47589
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>emb|AL954383.13| Zebrafish DNA sequence from clone CH211-226M11 in linkage group 17,
              complete sequence
          Length = 206679

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    aaggatgaattgcatgaaat 357
              ||||||||||||||||||||
Sbjct: 185975 aaggatgaattgcatgaaat 185956
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      gtctttcaactcatgaaaag 439
                ||||||||||||||||||||
Sbjct: 21699638 gtctttcaactcatgaaaag 21699619
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>gb|AC146271.2| Pan troglodytes BAC clone CH251-26F19 from chromosome y, complete
            sequence
          Length = 207919

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  gatgacattgagaaggatga 384
            ||||||||||||||||||||
Sbjct: 4362 gatgacattgagaaggatga 4381
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>gb|AC010879.2|AC010879 Homo sapiens BAC clone RP11-235I1 from Y, complete sequence
          Length = 181721

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   gatgacattgagaaggatga 384
             ||||||||||||||||||||
Sbjct: 17901 gatgacattgagaaggatga 17920
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>ref|XM_218663.3| PREDICTED: Rattus norvegicus similar to KIAA1357 protein (predicted)
            (LOC308631), mRNA
          Length = 7101

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   ggaggagggggaggagcaag 86
            ||||||||||||||||||||
Sbjct: 5120 ggaggagggggaggagcaag 5101
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   gtctttcaactcatgaaaag 439
             ||||||||||||||||||||
Sbjct: 51689 gtctttcaactcatgaaaag 51670
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>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    atggaggagggggaggagca 84
             ||||||||||||||||||||
Sbjct: 74356 atggaggagggggaggagca 74375



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    atggaggagggggaggagca 84
             ||||||||||||||||||||
Sbjct: 74316 atggaggagggggaggagca 74335
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>gb|AC124095.7| Mus musculus chromosome 1, clone RP23-245G9, complete sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    ggaggagggggaggagcaag 86
             ||||||||||||||||||||
Sbjct: 41079 ggaggagggggaggagcaag 41098
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>gb|U72333.1|HSLIS01 Human platelet activating factor acetylhydrolase, brain isoform, 45
           kDa subunit (LIS1) gene, exon 1
          Length = 2777

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 agcgaggagagaagaagaag 124
           ||||||||||||||||||||
Sbjct: 528 agcgaggagagaagaagaag 509
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>emb|BX322559.1|HSQ1L4 Homo sapiens chromosome 21 from cosmid LL21NC02-1L4 map 21q22.3 region
             D21S171-LA161, complete sequence
          Length = 45972

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    atggaggagggggaggagca 84
             ||||||||||||||||||||
Sbjct: 25891 atggaggagggggaggagca 25910



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    atggaggagggggaggagca 84
             ||||||||||||||||||||
Sbjct: 25851 atggaggagggggaggagca 25870
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>dbj|AB032402.1| Mus musculus BSP gene for brain serine protease, complete cds
          Length = 9182

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 67   ggaggagggggaggagcaagagta 90
            ||||||||||||| ||||||||||
Sbjct: 8641 ggaggagggggagaagcaagagta 8618
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>gb|AC169127.3| Mus musculus BAC clone RP24-493G21 from chromosome 9, complete
            sequence
          Length = 156163

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 67   ggaggagggggaggagcaagagta 90
            |||||||||||||||||| |||||
Sbjct: 8163 ggaggagggggaggagcatgagta 8140


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,371,284
Number of Sequences: 3902068
Number of extensions: 5371284
Number of successful extensions: 106561
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106166
Number of HSP's gapped (non-prelim): 392
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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