ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1c23 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 328 bits (840), Expect(2) = 2e-92 Identities = 161/162 (99%), Positives = 161/162 (99%) Frame = +3 Query: 111 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGI 290 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGI Sbjct: 22 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGI 81 Query: 291 VDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT 470 VDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT Sbjct: 82 VDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT 141 Query: 471 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 142 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 183 Score = 31.2 bits (69), Expect(2) = 2e-92 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = +2 Query: 71 VGAPASTPTNFLGXEAQE 124 VGAPASTPTNFLG + ++ Sbjct: 9 VGAPASTPTNFLGKKLKK 26
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 295 bits (755), Expect(2) = 1e-82 Identities = 146/164 (89%), Positives = 153/164 (93%), Gaps = 2/164 (1%) Frame = +3 Query: 111 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGK 284 KKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD +WKGLAYDISDDQQDITRGK Sbjct: 22 KKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDISDDQQDITRGK 80 Query: 285 GIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNF 464 G VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVVH+SKNF Sbjct: 81 GFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISKNF 140 Query: 465 MTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 MTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 141 MTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 184 Score = 31.2 bits (69), Expect(2) = 1e-82 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = +2 Query: 71 VGAPASTPTNFLGXEAQE 124 VGAPASTPTNFLG + ++ Sbjct: 9 VGAPASTPTNFLGKKLKK 26
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 263 bits (672), Expect(2) = 8e-71 Identities = 131/166 (78%), Positives = 145/166 (87%), Gaps = 4/166 (2%) Frame = +3 Query: 111 KKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITR 278 KKL K QV++AV YHGKSS +N RF MAA+ +DE + TD +WKGLAYDISDDQQDITR Sbjct: 24 KKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITR 83 Query: 279 GKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 458 GKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA FMDKLVVHLSK Sbjct: 84 GKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSK 143 Query: 459 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGE Sbjct: 144 NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGE 189 Score = 23.9 bits (50), Expect(2) = 8e-71 Identities = 12/15 (80%), Positives = 13/15 (86%), Gaps = 2/15 (13%) Frame = +2 Query: 71 VGAPASTPT--NFLG 109 VGAPASTPT +FLG Sbjct: 9 VGAPASTPTRSSFLG 23
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 255 bits (652), Expect(2) = 1e-69 Identities = 126/154 (81%), Positives = 138/154 (89%), Gaps = 4/154 (2%) Frame = +3 Query: 147 YHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAP 314 YHG + +R VMAA+ +D+ + TD +WKGLAYDISDDQQDITRGKGIVDSLFQAP Sbjct: 28 YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAP 87 Query: 315 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPL 494 GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFMDKL+VHL+KNFMTLPNIK+PL Sbjct: 88 MGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPL 147 Query: 495 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 148 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 181 Score = 27.7 bits (60), Expect(2) = 1e-69 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +2 Query: 71 VGAPASTPTNFLGXEAQ 121 VGAPASTPT FLG + + Sbjct: 9 VGAPASTPTIFLGKKVK 25
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 237 bits (604), Expect = 2e-62 Identities = 114/160 (71%), Positives = 133/160 (83%) Frame = +3 Query: 117 LKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVD 296 L K+V + + + K+N + A D++ + D+W+GLAYD SDDQQDITRGKG+VD Sbjct: 34 LGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVD 93 Query: 297 SLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLP 476 S+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLP Sbjct: 94 SVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLP 153 Query: 477 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 NIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGE Sbjct: 154 NIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGE 193
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 235 bits (599), Expect = 8e-62 Identities = 114/148 (77%), Positives = 132/148 (89%), Gaps = 1/148 (0%) Frame = +3 Query: 156 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 332 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 333 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 512 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165 Query: 513 GKGQGKSFQCELVFAKMGINPIMMSAGE 596 GKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGE 193
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 235 bits (599), Expect = 8e-62 Identities = 114/148 (77%), Positives = 132/148 (89%), Gaps = 1/148 (0%) Frame = +3 Query: 156 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 332 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 333 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 512 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165 Query: 513 GKGQGKSFQCELVFAKMGINPIMMSAGE 596 GKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGE 193
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 231 bits (588), Expect = 2e-60 Identities = 111/154 (72%), Positives = 130/154 (84%), Gaps = 2/154 (1%) Frame = +3 Query: 141 VNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDISDDQQDITRGKGIVDSLFQAP 314 VN +SK + ++ ++DE + TDK WKGLA+D SDDQQDITRGKG VDSLFQAP Sbjct: 40 VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAP 99 Query: 315 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPL 494 G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMDKLVVH++KNFMTLPN+K+PL Sbjct: 100 QGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPL 159 Query: 495 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 ILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE Sbjct: 160 ILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 230 bits (587), Expect = 2e-60 Identities = 116/164 (70%), Positives = 132/164 (80%), Gaps = 2/164 (1%) Frame = +3 Query: 111 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGK 284 K LKK V+ ++K+ R V ++D K+ TD +WKGL D SDDQQDITRGK Sbjct: 35 KTLKKVYGKGVSSPKVTNKSLRI-VAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGK 93 Query: 285 GIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNF 464 G+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++KNF Sbjct: 94 GMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNF 153 Query: 465 MTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 + LPNIK+PLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGE Sbjct: 154 LKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGE 197
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 229 bits (584), Expect = 5e-60 Identities = 113/162 (69%), Positives = 136/162 (83%), Gaps = 2/162 (1%) Frame = +3 Query: 117 LKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRGKGI 290 LKK ++S V + K + + V A + I+E + T D+W+GLAYD+SDDQQDITRGKG+ Sbjct: 37 LKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGL 95 Query: 291 VDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT 470 VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPAF+DKLVVH++KNFMT Sbjct: 96 VDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMT 155 Query: 471 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 LPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 156 LPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGE 197
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 228 bits (581), Expect = 1e-59 Identities = 116/166 (69%), Positives = 131/166 (78%), Gaps = 4/166 (2%) Frame = +3 Query: 111 KKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITR 278 K LKK V+ NR +AAE + D K+ T D+WKGL D SDDQQDI R Sbjct: 35 KTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIAR 91 Query: 279 GKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 458 GKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++K Sbjct: 92 GKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITK 151 Query: 459 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 NF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGE Sbjct: 152 NFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGE 197
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 228 bits (580), Expect = 1e-59 Identities = 104/140 (74%), Positives = 121/140 (86%) Frame = +3 Query: 177 FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 356 F ++A ++ +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE Sbjct: 51 FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110 Query: 357 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 536 Y+S GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSF Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSF 170 Query: 537 QCELVFAKMGINPIMMSAGE 596 QCELVFAKMGINPIMMSAGE Sbjct: 171 QCELVFAKMGINPIMMSAGE 190
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 225 bits (573), Expect = 9e-59 Identities = 110/146 (75%), Positives = 122/146 (83%) Frame = +3 Query: 159 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 338 SS+ TV AAEN E++NTDKW LA D SDDQ DI RGKG+VDSLFQAP GTH Sbjct: 48 SSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVP 105 Query: 339 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 518 + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++KNF+ LPNIKIPLILG+WGGK Sbjct: 106 IQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGK 165 Query: 519 GQGKSFQCELVFAKMGINPIMMSAGE 596 GQGKSFQCELVFAK+GINPIMMSAGE Sbjct: 166 GQGKSFQCELVFAKLGINPIMMSAGE 191
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 223 bits (569), Expect = 2e-58 Identities = 109/162 (67%), Positives = 128/162 (79%) Frame = +3 Query: 111 KKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGI 290 K LKK V+ +NR + A+ +DE + D+WKGL + SDDQQDI RGKG+ Sbjct: 35 KSLKKVYAKGVS---SPKVSNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGL 90 Query: 291 VDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT 470 VDSLFQAPTG GTH A+++SYEYVSQ L+ Y DN + GFYIAPAFMDKLVVH++KNF+T Sbjct: 91 VDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLT 150 Query: 471 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGE Sbjct: 151 LPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGE 192
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 223 bits (568), Expect = 3e-58 Identities = 116/162 (71%), Positives = 131/162 (80%), Gaps = 2/162 (1%) Frame = +3 Query: 117 LKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRGKGI 290 LKK V S V + K + + V A + I+E + T D+WKGLAYDISDDQQDITRGKG+ Sbjct: 37 LKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGM 95 Query: 291 VDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMT 470 VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPAF+DKLVVH++KNFMT Sbjct: 96 VDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITKNFMT 153 Query: 471 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE Sbjct: 154 LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 195
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 159 bits (403), Expect = 4e-39 Identities = 78/132 (59%), Positives = 99/132 (75%), Gaps = 3/132 (2%) Frame = +3 Query: 210 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 380 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 381 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 560 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154 Query: 561 MGINPIMMSAGE 596 +GI PI+MSAGE Sbjct: 155 LGIAPIVMSAGE 166
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 90.9 bits (224), Expect = 3e-18 Identities = 38/63 (60%), Positives = 51/63 (80%) Frame = +3 Query: 408 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 587 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 588 AGE 596 GE Sbjct: 63 GGE 65
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 90.5 bits (223), Expect = 3e-18 Identities = 38/63 (60%), Positives = 51/63 (80%) Frame = +3 Query: 408 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 587 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 588 AGE 596 GE Sbjct: 63 GGE 65
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 357 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 536 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 537 QC 542 QC Sbjct: 388 QC 389
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -1 Query: 413 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 237 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -2 Query: 325 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 179 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 270 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 440 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 441 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 527 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -1 Query: 518 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 339 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 338 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 234 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 5.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 270 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 440 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 441 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 527 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 5.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 270 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 440 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 441 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 527 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 5.3 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 485 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 321 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 320 ARGRLEERVHDALPSGDVLLVVG 252 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 483 KIPLILGIWGGKGQGKSFQCELVFAKMG 566 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 5.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 270 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 440 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 441 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 527 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -2 Query: 568 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 431 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +3 Query: 489 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 PL++ + GG G GK QC + K G +SAGE Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGE 36
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +3 Query: 489 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 596 PL++ + GG G GK QC + K G +SAGE Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGE 36
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +3 Query: 144 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 323 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 324 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 482 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 9.0 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 485 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 321 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISSPEALQNPVHLVIANILLAPLI 233 Query: 320 ARGRLEERVHDALPSGDVLLVVG 252 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 485 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 321 + +G H ++DN+ + ++S+ A+H + + P+AL + L+ A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISTPEALQNPVHLIIANILLAPLI 233 Query: 320 ARGRLEERVHDALPSGDVLLVVG 252 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine| monophosphokinase 1) (Cytidine monophosphokinase 1) Length = 277 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 489 PLILGIWGGKGQGKSFQCELVFAKMGINPI 578 P ++G+ GG GKS CE + +G N + Sbjct: 23 PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine| monophosphokinase 1) (Cytidine monophosphokinase 1) Length = 277 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 489 PLILGIWGGKGQGKSFQCELVFAKMGINPI 578 P ++G+ GG GKS CE + +G N + Sbjct: 23 PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 246 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 380 D S +D RGKG+ THEA LS +V++GL K Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239
>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107| Length = 1070 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/53 (26%), Positives = 28/53 (52%) Frame = +3 Query: 156 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 314 K + + +++ E++ K++TDK+ L +SD+ I K V+S + P Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = +1 Query: 4 AHPPLLARSTKQHXXGCCLLLHRRGSG 84 A P L RST+Q G C RRGSG Sbjct: 315 AELPSLRRSTRQKTTGSCASTSRRGSG 341 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,568,266 Number of Sequences: 219361 Number of extensions: 1548186 Number of successful extensions: 5011 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 4883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5001 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
