ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1668 Score = 317 bits (160), Expect = 2e-83 Identities = 283/324 (87%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 465 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 524 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 cctcggccctcctgtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 584 Query: 123 gcagaacaacatcctgtggttctacccgaaggccgacgcccagcaccaggacgttctgca 182 ||||||||||||||||||||||||||||| | | || | || || |||| | ||||| Sbjct: 585 gcagaacaacatcctgtggttctacccgaggtcggagccggagtacaaggagatcctgca 644 Query: 183 gaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtctacgg 242 ||||||||| ||||| | | |||| || |||| ||||| |||||| ||| |||| ||| Sbjct: 645 gaggaagcggccgccgtacttcccagacctcgatgacccgtccttcaacacagtcttcgg 704 Query: 243 cgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggaccctgcaca 302 ||||||||||||| |||||||||||| ||| |||||||||| || ||||||||||| || Sbjct: 705 cgtcagggacctcttctacgggtacgacgtgttggtggagaatcttatggaccctgctca 764 Query: 303 cgtcccctacgcgcacaaggggct 326 ||||| ||||||||||||||||| Sbjct: 765 tgtcccatacgcgcacaaggggct 788 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 1062 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 1121 Query: 618 gaa 620 ||| Sbjct: 1122 gaa 1124
>ref|XM_470014.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 317 bits (160), Expect = 2e-83 Identities = 283/324 (87%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 465 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 524 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 cctcggccctcctgtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 584 Query: 123 gcagaacaacatcctgtggttctacccgaaggccgacgcccagcaccaggacgttctgca 182 ||||||||||||||||||||||||||||| | | || | || || |||| | ||||| Sbjct: 585 gcagaacaacatcctgtggttctacccgaggtcggagccggagtacaaggagatcctgca 644 Query: 183 gaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtctacgg 242 ||||||||| ||||| | | |||| || |||| ||||| |||||| ||| |||| ||| Sbjct: 645 gaggaagcggccgccgtacttcccagacctcgatgacccgtccttcaacacagtcttcgg 704 Query: 243 cgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggaccctgcaca 302 ||||||||||||| |||||||||||| ||| |||||||||| || ||||||||||| || Sbjct: 705 cgtcagggacctcttctacgggtacgacgtgttggtggagaatcttatggaccctgctca 764 Query: 303 cgtcccctacgcgcacaaggggct 326 ||||| ||||||||||||||||| Sbjct: 765 tgtcccatacgcgcacaaggggct 788 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 1053 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 1112 Query: 618 gaa 620 ||| Sbjct: 1113 gaa 1115
>ref|XM_470013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 256 bits (129), Expect = 8e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| || | |||||||||||||||||||| || || || || Sbjct: 450 ctaccatggctggtgcttcgatggacatggctcctgccagttcatcccccaagctcctgc 509 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 ccttggccctcccgtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 569 Query: 123 gcagaacaacatcctgtggttctacccgaaggccgacgcccagcaccaggacgttctgca 182 |||||||||||||||||||||||||||| | || | || ||| ||||| ||||| Sbjct: 570 acagaacaacatcctgtggttctacccgagaacggagccagagtaccgcgacgtgctgca 629 Query: 183 gaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtctacgg 242 ||||||||| ||||||| | |||| || |||| || || |||||| |||||||| ||| Sbjct: 630 gaggaagcggccgccatacttcccagatctcgatgatccgtccttcaacaccgtcttcgg 689 Query: 243 cgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggaccctgc 299 |||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 690 cgtcagggacttcccctacgggtacgacatgttggtggagaacctcatggaccctgc 746 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctggg 607 |||||||||||| ||||| |||| ||| |||| || | |||||||||||| |||| Sbjct: 970 atgctggtgttcttgtgcatccctgtggctcctggaaggagcagggtgatatggg 1024 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 383 gcggcgggccagtgaagatgaagatagcggaggcggatatcgccgggttcctgtc 437 ||||||| || || ||||||||||||| |||||| | |||| |||||||||||| Sbjct: 791 gcggcggcccggtcaagatgaagatagaggaggccaacatcgacgggttcctgtc 845
>ref|XM_470012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1912 Score = 242 bits (122), Expect = 1e-60 Identities = 205/232 (88%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 684 ctgcagaggaagcggccgccatacatcccgcagatcgacgacccgtccttcgtcaccgtc 743 Query: 238 tacggcgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggaccct 297 || ||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||| Sbjct: 744 tatggcgtcagggatctcccctatgggtacgatgtgttggtggagaatctcatggaccct 803 Query: 298 gcacacgtcccctacgcgcacaaggggctcatgggcaagcttcgcaagaaggaagaccca 357 || || ||||||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 804 gctcatgtcccctacgcgcacaaggggttgatgcgca---cccgcaagaaggaagatcca 860 Query: 358 ggaagagttgagttcgacgtcgaaggcggcgggccagtgaagatgaagatag 409 |||||||||||||||||| |||||||||||||| | |||||| |||||| Sbjct: 861 ggaagagttgagttcgacaaggaaggcggcgggccgctcaagatggagatag 912 Score = 228 bits (115), Expect = 2e-56 Identities = 142/151 (94%) Strand = Plus / Plus Query: 1 gtctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggccccc 60 |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 507 gtctaccatggctggtgcttcgacggccgcggcgcctgccagttcatcccccaggccccc 566 Query: 61 gcactcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtg 120 || ||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 567 gccctcggccccgcggtgcacaagaacagcaaggcgtgcgtggcatcatacccatgcgtg 626 Query: 121 gtgcagaacaacatcctgtggttctacccga 151 ||||||||||||||||||||||||||||||| Sbjct: 627 gtgcagaacaacatcctgtggttctacccga 657 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttc 612 |||||||||||| ||||| |||||||||||||||||| ||||||| || ||||||| ||| Sbjct: 1059 atgctggtgttcttgtgcatcccggtgtctccggggaggagcaggttggtctgggcattc 1118 Query: 613 ccgaggaacatcggcgtctgg 633 ||| ||||| ||||||||||| Sbjct: 1119 ccgcggaacgtcggcgtctgg 1139 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 468 cgtcgcgccgtgcaccttctacggctcgcc 497 ||||||||||||||| |||||||||||||| Sbjct: 968 cgtcgcgccgtgcacgttctacggctcgcc 997
>ref|XM_470018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 224 bits (113), Expect = 3e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 441 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 500 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 || ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 501 cctaggccctcctgtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggt 560 Query: 123 gcagaacaacatcctgtggttctacccga 151 ||||||||||||||||||||||||||||| Sbjct: 561 gcagaacaacatcctgtggttctacccga 589 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 616 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 675 Query: 238 tacggcgtcagggacctc 255 | ||||||||| |||||| Sbjct: 676 tccggcgtcagagacctc 693 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 973 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 1023
>ref|XM_470021.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 224 bits (113), Expect = 3e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 135 ctaccatggctggtgcttcgacggccacggctcctgccagttcatcccccaggctcccgc 194 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 195 cctcggccctcctgtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggt 254 Query: 123 gcagaacaacatcctgtggttctacccga 151 ||||||||||||| ||||||||||||||| Sbjct: 255 gcagaacaacatcttgtggttctacccga 283 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 235 gtctacggcgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggac 294 |||||||| |||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 373 gtctacggtgtcagggacctcttatacgggtatgagttgttggtggagaacctcatggac 432 Query: 295 cctgcacacgtcccctacgcgcacaaggggct 326 ||||| |||||||||||||| ||||||||||| Sbjct: 433 cctgctcacgtcccctacgcacacaaggggct 464
>ref|XM_470015.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1566 Score = 224 bits (113), Expect = 3e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 441 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 500 Query: 63 actcggccccccggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggt 122 || ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 501 cctaggccctcctgtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggt 560 Query: 123 gcagaacaacatcctgtggttctacccga 151 ||||||||||||||||||||||||||||| Sbjct: 561 gcagaacaacatcctgtggttctacccga 589 Score = 91.7 bits (46), Expect = 3e-15 Identities = 118/142 (83%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 616 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 675 Query: 238 tacggcgtcagggacctcccctacgggtacgatgtgctggtggagaacctcatggaccct 297 | ||||||||| |||||| ||||| ||||| || |||||||||| ||||||||||| Sbjct: 676 tccggcgtcagagacctcttatacggatacgagttgttggtggagaatttcatggaccct 735 Query: 298 gcacacgtcccctacgcgcaca 319 || ||||| ||||||||||||| Sbjct: 736 gctcacgttccctacgcgcaca 757 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 961 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 1011
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 6e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33342010 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtacagaacaacat 33342069 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | || | || ||| ||||| |||||||||||||| || Sbjct: 33342070 cctgtggttctacccgagaacggagccagagtaccgcgacgtgctgcagaggaagcggcc 33342129 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||||| | |||| || |||| || || |||||| |||||||| ||||||||||||| | Sbjct: 33342130 gccatacttcccagatctcgatgatccgtccttcaacaccgtcttcggcgtcagggactt 33342189 Query: 255 cccctacgggtac 267 ||||||||||||| Sbjct: 33342190 cccctacgggtac 33342202 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33346043 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33346102 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | | || | || || |||| | |||||||||||||| || Sbjct: 33346103 cctgtggttctacccgaggtcggagccggagtacaaggagatcctgcagaggaagcggcc 33346162 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||| | | |||| || |||| ||||| |||||| ||| |||| ||||||||||||||| Sbjct: 33346163 gccgtacttcccagacctcgatgacccgtccttcaacacagtcttcggcgtcagggacct 33346222 Query: 255 cccctacgggtac 267 | |||||||||| Sbjct: 33346223 cttctacgggtac 33346235 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33356233 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33356292 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 33356293 cctgtggttctacccga 33356309 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33378509 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33378568 Query: 135 cctgtggttctacccga 151 | ||||||||||||||| Sbjct: 33378569 cttgtggttctacccga 33378585 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 33335456 ctgcagaggaagcggccgccatacatcccgcagatcgacgacccgtccttcgtcaccgtc 33335515 Query: 238 tacggcgtcagggacctcccctacgggtac 267 || ||||||||||| |||||||| |||||| Sbjct: 33335516 tatggcgtcagggatctcccctatgggtac 33335545 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 33335353 ggtgcacaagaacagcaaggcgtgcgtggcatcatacccatgcgtggtgcagaacaacat 33335412 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 33335413 cctgtggttctacccga 33335429 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 gtctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggccccc 60 |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 33335194 gtctaccatggctggtgcttcgacggccgcggcgcctgccagttcatcccccaggccccc 33335253 Query: 61 gcactcggccccccggt 77 || ||||||||| |||| Sbjct: 33335254 gccctcggccccgcggt 33335270 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 33378335 ctaccatggctggtgcttcgacggccacggctcctgccagttcatcccccaggctcccgc 33378394 Query: 63 actcggccc 71 |||||||| Sbjct: 33378395 cctcggccc 33378403 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 33345890 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 33345949 Query: 63 actcggccc 71 |||||||| Sbjct: 33345950 cctcggccc 33345958 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttc 612 |||||||||||| ||||| |||||||||||||||||| ||||||| || ||||||| ||| Sbjct: 33336148 atgctggtgttcttgtgcatcccggtgtctccggggaggagcaggttggtctgggcattc 33336207 Query: 613 ccgaggaacatcggcgtctgg 633 ||| ||||| ||||||||||| Sbjct: 33336208 ccgcggaacgtcggcgtctgg 33336228 Score = 93.7 bits (47), Expect = 7e-16 Identities = 88/101 (87%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 33335641 ggtacgatgtgttggtggagaatctcatggaccctgctcatgtcccctacgcgcacaagg 33335700 Query: 323 ggctcatgggcaagcttcgcaagaaggaagacccaggaaga 363 || | ||| ||| |||||||||||||| ||||||||| Sbjct: 33335701 ggttgatgcgca---cccgcaagaaggaagatccaggaaga 33335738 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 33356083 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 33356142 Query: 63 actcggccc 71 || ||||| Sbjct: 33356143 cctaggccc 33356151 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggctc 327 ||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 33342298 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggctc 33342350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggct 326 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 33380582 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggct 33380633 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||| ||| |||||||||| || ||||||||||| || ||||| ||||||||||||| Sbjct: 33346635 ggtacgacgtgttggtggagaatcttatggaccctgctcatgtcccatacgcgcacaagg 33346694 Query: 323 ggct 326 |||| Sbjct: 33346695 ggct 33346698 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 33348517 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 33348576 Query: 618 gaa 620 ||| Sbjct: 33348577 gaa 33348579 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcaca 319 |||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 33356629 tggtggagaatttcatggaccctgctcacgttccctacgcgcaca 33356673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatccc 50 |||||| |||||||||||||| || | |||||||||||||||||||| Sbjct: 33341635 ctaccatggctggtgcttcgatggacatggctcctgccagttcatccc 33341682 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 33356336 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 33356395 Query: 238 tacggcgtcagggacctc 255 | ||||||||| |||||| Sbjct: 33356396 tccggcgtcagagacctc 33356413 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 468 cgtcgcgccgtgcaccttctacggctcgcc 497 ||||||||||||||| |||||||||||||| Sbjct: 33335978 cgtcgcgccgtgcacgttctacggctcgcc 33336007 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctggg 607 |||||||||||| ||||| |||| ||| |||| || | |||||||||||| |||| Sbjct: 33342781 atgctggtgttcttgtgcatccctgtggctcctggaaggagcagggtgatatggg 33342835 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 383 gcggcgggccagtgaagatgaagatagcggaggcggatatcgccgggttcctgtc 437 ||||||| || || ||||||||||||| |||||| | |||| |||||||||||| Sbjct: 33342533 gcggcggcccggtcaagatgaagatagaggaggccaacatcgacgggttcctgtc 33342587 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 33357137 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 33357187
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 176 bits (89), Expect = 6e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 98526 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtacagaacaacat 98585 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | || | || ||| ||||| |||||||||||||| || Sbjct: 98586 cctgtggttctacccgagaacggagccagagtaccgcgacgtgctgcagaggaagcggcc 98645 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||||| | |||| || |||| || || |||||| |||||||| ||||||||||||| | Sbjct: 98646 gccatacttcccagatctcgatgatccgtccttcaacaccgtcttcggcgtcagggactt 98705 Query: 255 cccctacgggtac 267 ||||||||||||| Sbjct: 98706 cccctacgggtac 98718 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102559 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 102618 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | | || | || || |||| | |||||||||||||| || Sbjct: 102619 cctgtggttctacccgaggtcggagccggagtacaaggagatcctgcagaggaagcggcc 102678 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||| | | |||| || |||| ||||| |||||| ||| |||| ||||||||||||||| Sbjct: 102679 gccgtacttcccagacctcgatgacccgtccttcaacacagtcttcggcgtcagggacct 102738 Query: 255 cccctacgggtac 267 | |||||||||| Sbjct: 102739 cttctacgggtac 102751 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112749 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 112808 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 112809 cctgtggttctacccga 112825 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 91972 ctgcagaggaagcggccgccatacatcccgcagatcgacgacccgtccttcgtcaccgtc 92031 Query: 238 tacggcgtcagggacctcccctacgggtac 267 || ||||||||||| |||||||| |||||| Sbjct: 92032 tatggcgtcagggatctcccctatgggtac 92061 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 91869 ggtgcacaagaacagcaaggcgtgcgtggcatcatacccatgcgtggtgcagaacaacat 91928 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 91929 cctgtggttctacccga 91945 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 gtctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggccccc 60 |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 91710 gtctaccatggctggtgcttcgacggccgcggcgcctgccagttcatcccccaggccccc 91769 Query: 61 gcactcggccccccggt 77 || ||||||||| |||| Sbjct: 91770 gccctcggccccgcggt 91786 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 102406 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 102465 Query: 63 actcggccc 71 |||||||| Sbjct: 102466 cctcggccc 102474 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttc 612 |||||||||||| ||||| |||||||||||||||||| ||||||| || ||||||| ||| Sbjct: 92664 atgctggtgttcttgtgcatcccggtgtctccggggaggagcaggttggtctgggcattc 92723 Query: 613 ccgaggaacatcggcgtctgg 633 ||| ||||| ||||||||||| Sbjct: 92724 ccgcggaacgtcggcgtctgg 92744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 88/101 (87%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 92157 ggtacgatgtgttggtggagaatctcatggaccctgctcatgtcccctacgcgcacaagg 92216 Query: 323 ggctcatgggcaagcttcgcaagaaggaagacccaggaaga 363 || | ||| ||| |||||||||||||| ||||||||| Sbjct: 92217 ggttgatgcgca---cccgcaagaaggaagatccaggaaga 92254 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 112599 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 112658 Query: 63 actcggccc 71 || ||||| Sbjct: 112659 cctaggccc 112667 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggctc 327 ||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 98814 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggctc 98866 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||| ||| |||||||||| || ||||||||||| || ||||| ||||||||||||| Sbjct: 103151 ggtacgacgtgttggtggagaatcttatggaccctgctcatgtcccatacgcgcacaagg 103210 Query: 323 ggct 326 |||| Sbjct: 103211 ggct 103214 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 105033 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 105092 Query: 618 gaa 620 ||| Sbjct: 105093 gaa 105095 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcaca 319 |||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 113145 tggtggagaatttcatggaccctgctcacgttccctacgcgcaca 113189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatccc 50 |||||| |||||||||||||| || | |||||||||||||||||||| Sbjct: 98151 ctaccatggctggtgcttcgatggacatggctcctgccagttcatccc 98198 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 112852 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 112911 Query: 238 tacggcgtcagggacctc 255 | ||||||||| |||||| Sbjct: 112912 tccggcgtcagagacctc 112929 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 468 cgtcgcgccgtgcaccttctacggctcgcc 497 ||||||||||||||| |||||||||||||| Sbjct: 92494 cgtcgcgccgtgcacgttctacggctcgcc 92523 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctggg 607 |||||||||||| ||||| |||| ||| |||| || | |||||||||||| |||| Sbjct: 99297 atgctggtgttcttgtgcatccctgtggctcctggaaggagcagggtgatatggg 99351 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 383 gcggcgggccagtgaagatgaagatagcggaggcggatatcgccgggttcctgtc 437 ||||||| || || ||||||||||||| |||||| | |||| |||||||||||| Sbjct: 99049 gcggcggcccggtcaagatgaagatagaggaggccaacatcgacgggttcctgtc 99103 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 113653 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 113703
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 6e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33432520 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtacagaacaacat 33432579 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | || | || ||| ||||| |||||||||||||| || Sbjct: 33432580 cctgtggttctacccgagaacggagccagagtaccgcgacgtgctgcagaggaagcggcc 33432639 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||||| | |||| || |||| || || |||||| |||||||| ||||||||||||| | Sbjct: 33432640 gccatacttcccagatctcgatgatccgtccttcaacaccgtcttcggcgtcagggactt 33432699 Query: 255 cccctacgggtac 267 ||||||||||||| Sbjct: 33432700 cccctacgggtac 33432712 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33436553 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33436612 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | | || | || || |||| | |||||||||||||| || Sbjct: 33436613 cctgtggttctacccgaggtcggagccggagtacaaggagatcctgcagaggaagcggcc 33436672 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||| | | |||| || |||| ||||| |||||| ||| |||| ||||||||||||||| Sbjct: 33436673 gccgtacttcccagacctcgatgacccgtccttcaacacagtcttcggcgtcagggacct 33436732 Query: 255 cccctacgggtac 267 | |||||||||| Sbjct: 33436733 cttctacgggtac 33436745 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33446743 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33446802 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 33446803 cctgtggttctacccga 33446819 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33469019 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 33469078 Query: 135 cctgtggttctacccga 151 | ||||||||||||||| Sbjct: 33469079 cttgtggttctacccga 33469095 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 33425966 ctgcagaggaagcggccgccatacatcccgcagatcgacgacccgtccttcgtcaccgtc 33426025 Query: 238 tacggcgtcagggacctcccctacgggtac 267 || ||||||||||| |||||||| |||||| Sbjct: 33426026 tatggcgtcagggatctcccctatgggtac 33426055 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 33425863 ggtgcacaagaacagcaaggcgtgcgtggcatcatacccatgcgtggtgcagaacaacat 33425922 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 33425923 cctgtggttctacccga 33425939 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 gtctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggccccc 60 |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 33425704 gtctaccatggctggtgcttcgacggccgcggcgcctgccagttcatcccccaggccccc 33425763 Query: 61 gcactcggccccccggt 77 || ||||||||| |||| Sbjct: 33425764 gccctcggccccgcggt 33425780 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 33468845 ctaccatggctggtgcttcgacggccacggctcctgccagttcatcccccaggctcccgc 33468904 Query: 63 actcggccc 71 |||||||| Sbjct: 33468905 cctcggccc 33468913 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 33436400 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 33436459 Query: 63 actcggccc 71 |||||||| Sbjct: 33436460 cctcggccc 33436468 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttc 612 |||||||||||| ||||| |||||||||||||||||| ||||||| || ||||||| ||| Sbjct: 33426658 atgctggtgttcttgtgcatcccggtgtctccggggaggagcaggttggtctgggcattc 33426717 Query: 613 ccgaggaacatcggcgtctgg 633 ||| ||||| ||||||||||| Sbjct: 33426718 ccgcggaacgtcggcgtctgg 33426738 Score = 93.7 bits (47), Expect = 7e-16 Identities = 88/101 (87%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 33426151 ggtacgatgtgttggtggagaatctcatggaccctgctcatgtcccctacgcgcacaagg 33426210 Query: 323 ggctcatgggcaagcttcgcaagaaggaagacccaggaaga 363 || | ||| ||| |||||||||||||| ||||||||| Sbjct: 33426211 ggttgatgcgca---cccgcaagaaggaagatccaggaaga 33426248 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 33446593 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 33446652 Query: 63 actcggccc 71 || ||||| Sbjct: 33446653 cctaggccc 33446661 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggctc 327 ||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 33432808 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggctc 33432860 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggct 326 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 33471092 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggct 33471143 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||| ||| |||||||||| || ||||||||||| || ||||| ||||||||||||| Sbjct: 33437145 ggtacgacgtgttggtggagaatcttatggaccctgctcatgtcccatacgcgcacaagg 33437204 Query: 323 ggct 326 |||| Sbjct: 33437205 ggct 33437208 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 33439027 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 33439086 Query: 618 gaa 620 ||| Sbjct: 33439087 gaa 33439089 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcaca 319 |||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 33447139 tggtggagaatttcatggaccctgctcacgttccctacgcgcaca 33447183 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatccc 50 |||||| |||||||||||||| || | |||||||||||||||||||| Sbjct: 33432145 ctaccatggctggtgcttcgatggacatggctcctgccagttcatccc 33432192 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 33446846 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 33446905 Query: 238 tacggcgtcagggacctc 255 | ||||||||| |||||| Sbjct: 33446906 tccggcgtcagagacctc 33446923 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 468 cgtcgcgccgtgcaccttctacggctcgcc 497 ||||||||||||||| |||||||||||||| Sbjct: 33426488 cgtcgcgccgtgcacgttctacggctcgcc 33426517 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 553 atgctggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctggg 607 |||||||||||| ||||| |||| ||| |||| || | |||||||||||| |||| Sbjct: 33433291 atgctggtgttcttgtgcatccctgtggctcctggaaggagcagggtgatatggg 33433345 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 383 gcggcgggccagtgaagatgaagatagcggaggcggatatcgccgggttcctgtc 437 ||||||| || || ||||||||||||| |||||| | |||| |||||||||||| Sbjct: 33433043 gcggcggcccggtcaagatgaagatagaggaggccaacatcgacgggttcctgtc 33433097 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 33447647 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 33447697
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152068 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 152009 Query: 135 cctgtggttctacccgaaggccgacgcccagcaccaggacgttctgcagaggaagcgccc 194 ||||||||||||||||| | | || | || || |||| | |||||||||||||| || Sbjct: 152008 cctgtggttctacccgaggtcggagccggagtacaaggagatcctgcagaggaagcggcc 151949 Query: 195 gccattcatcccggagatcgacgacccctccttcgtcaccgtctacggcgtcagggacct 254 ||| | | |||| || |||| ||||| |||||| ||| |||| ||||||||||||||| Sbjct: 151948 gccgtacttcccagacctcgatgacccgtccttcaacacagtcttcggcgtcagggacct 151889 Query: 255 cccctacgggtac 267 | |||||||||| Sbjct: 151888 cttctacgggtac 151876 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Minus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141878 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 141819 Query: 135 cctgtggttctacccga 151 ||||||||||||||||| Sbjct: 141818 cctgtggttctacccga 141802 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 75 ggtgcacaagaacagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 134 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119602 ggtgcacaagaatagcaaggcgtgcgtggcgtcgtacccgagcgtggtgcagaacaacat 119543 Query: 135 cctgtggttctacccga 151 | ||||||||||||||| Sbjct: 119542 cttgtggttctacccga 119526 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 152221 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 152162 Query: 63 actcggccc 71 |||||||| Sbjct: 152161 cctcggccc 152153 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 119776 ctaccatggctggtgcttcgacggccacggctcctgccagttcatcccccaggctcccgc 119717 Query: 63 actcggccc 71 |||||||| Sbjct: 119716 cctcggccc 119708 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 3 ctaccacggctggtgcttcgacggccgcggctcctgccagttcatcccacaggcccccgc 62 |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 142028 ctaccatggctggtgcttcgatggccacggctcctgccagttcatcccccaggcccccgc 141969 Query: 63 actcggccc 71 || ||||| Sbjct: 141968 cctaggccc 141960 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcacaaggggct 326 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 117529 tggtggagaacctcatggaccctgctcacgtcccctacgcacacaaggggct 117478 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcacacgtcccctacgcgcacaagg 322 ||||||| ||| |||||||||| || ||||||||||| || ||||| ||||||||||||| Sbjct: 151476 ggtacgacgtgttggtggagaatcttatggaccctgctcatgtcccatacgcgcacaagg 151417 Query: 323 ggct 326 |||| Sbjct: 151416 ggct 151413 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 558 ggtgttcatgtgcgtcccggtgtctccggggaagagcagggtgatctgggcgttcccgag 617 ||||||| |||||||||||||| ||||||| | |||||| |||| |||||||||||| | Sbjct: 149594 ggtgttcttgtgcgtcccggtggctccgggaagaagcaggttgatatgggcgttcccgcg 149535 Query: 618 gaa 620 ||| Sbjct: 149534 gaa 149532 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcaca 319 |||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 141482 tggtggagaatttcatggaccctgctcacgttccctacgcgcaca 141438 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 178 ctgcagaggaagcgcccgccattcatcccggagatcgacgacccctccttcgtcaccgtc 237 |||||||||||||| ||||| | ||||| |||| |||||||||| || | ||||| | | Sbjct: 141775 ctgcagaggaagcggccgccgtacatccgggagctcgacgacccgtcgtccgtcatcaac 141716 Query: 238 tacggcgtcagggacctc 255 | ||||||||| |||||| Sbjct: 141715 tccggcgtcagagacctc 141698 Score = 40.1 bits (20), Expect = 8.7 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 559 gtgttcatgtgcgtcccggtgtctccggggaaga-gcagggtgatctgggcg 609 |||||| | ||| ||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 140974 gtgttcttctgcatcccggtgtctcc-gggaagatgcagggtcatctgggcg 140924
>gb|AY023751.1| Oryza sativa microsatellite MRG6076 containing (ACAT)X17, closest to marker R707, genomic sequence Length = 268 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 275 tggtggagaacctcatggaccctgcacacgtcccctacgcgcaca 319 |||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 53 tggtggagaatttcatggaccctgctcacgttccctacgcgcaca 9
>ref|NM_118697.2| Arabidopsis thaliana electron carrier/ oxidoreductase AT4G25650 transcript variant AT4G25650.1 mRNA, complete cds Length = 1771 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 744 tacgggtacgatgtcttggtggaaaacctcatggaccc 781
>ref|NM_179113.1| Arabidopsis thaliana electron carrier/ oxidoreductase AT4G25650 transcript variant AT4G25650.2 mRNA, complete cds Length = 1840 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 744 tacgggtacgatgtcttggtggaaaacctcatggaccc 781
>gb|AY344062.1| Arabidopsis thaliana LLS1-like protein mRNA, complete cds Length = 1611 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 700 tacgggtacgatgtcttggtggaaaacctcatggaccc 737
>gb|AY056168.1| Arabidopsis thaliana unknown protein (At4g25650) mRNA, complete cds Length = 1784 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 736 tacgggtacgatgtcttggtggaaaacctcatggaccc 773
>gb|AY062731.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1837 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 744 tacgggtacgatgtcttggtggaaaacctcatggaccc 781
>gb|AF424575.1|AF424575 Arabidopsis thaliana AT4g25650/L73G19_30 mRNA, complete cds Length = 1721 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 713 tacgggtacgatgtcttggtggaaaacctcatggaccc 750
>emb|BX826700.1|CNS0A413 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1679 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 710 tacgggtacgatgtcttggtggaaaacctcatggaccc 747
>emb|BX826697.1|CNS0A40E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1679 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 709 tacgggtacgatgtcttggtggaaaacctcatggaccc 746
>emb|BX828488.1|CNS0A3T8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1762 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 709 tacgggtacgatgtcttggtggaaaacctcatggaccc 746
>emb|BX827418.1|CNS0A3OG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS52ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1732 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 715 tacgggtacgatgtcttggtggaaaacctcatggaccc 752
>gb|BT002586.1| Arabidopsis thaliana Unknown protein (At4g25650) mRNA, complete cds Length = 1744 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 700 tacgggtacgatgtcttggtggaaaacctcatggaccc 737
>gb|AC163355.2| Mus musculus BAC clone RP23-11P15 from chromosome 16, complete sequence Length = 225547 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 576 ggtgtctccggggaagagcagggtga 601 |||||||||| ||||||||||||||| Sbjct: 112924 ggtgtctccgaggaagagcagggtga 112899
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 ggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||| ||||||| |||||||||||||| Sbjct: 164485 ggtacgatgtcttggtggaaaacctcatggaccc 164452
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 ggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||| ||||||| |||||||||||||| Sbjct: 12978 ggtacgatgtcttggtggaaaacctcatggaccc 12945
>emb|BX827110.1|CNS0A407 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 44.1 bits (22), Expect = 0.56 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 259 tacgggtacgatgtgctggtggagaacctcatggaccc 296 |||||||||||||| ||||||| |||||||||||||| Sbjct: 715 tacgggtacgatgtcttggtgga-aacctcatggaccc 751
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 206 cggagatcgacgacccctccttcgtcacc 234 |||||||||||||| |||||||| ||||| Sbjct: 153703 cggagatcgacgacacctccttcctcacc 153675
>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two CpG islands, complete sequence Length = 131112 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 tcgacggccgcggctcctgcc 40 ||||||||||||||||||||| Sbjct: 75995 tcgacggccgcggctcctgcc 75975
>ref|XM_781250.1| PREDICTED: Strongylocentrotus purpuratus similar to dehydrogenase E1 and transketolase domain containing protein 1 (LOC581237), partial mRNA Length = 2238 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gagatcgacgacccctccttc 228 ||||||||||||||||||||| Sbjct: 805 gagatcgacgacccctccttc 825
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ctaccacggctggtgcttcgacggc 27 ||||||||||||| ||||||||||| Sbjct: 2042947 ctaccacggctggcgcttcgacggc 2042923
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgatgtgctggtggagaacct 287 ||||||||||||||||||||| Sbjct: 3018247 cgatgtgctggtggagaacct 3018227
>gb|AC154215.1| Mus musculus BAC clone RP24-134E18 from 13, complete sequence Length = 171014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 gaaggaagacccaggaagagt 365 ||||||||||||||||||||| Sbjct: 32647 gaaggaagacccaggaagagt 32627
>gb|AC159425.1| Trypanosoma brucei chromosome 3 clone RPCI93-27F10, complete sequence Length = 135196 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aagaaggaagacccaggaag 362 |||||||||||||||||||| Sbjct: 120099 aagaaggaagacccaggaag 120080
>gb|AE008517.1| Streptococcus pneumoniae R6 section 133 of 184 of the complete genome Length = 10382 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 aagcttcgcaagaaggaagaccca 357 |||||||||||||||| ||||||| Sbjct: 1202 aagcttcgcaagaaggcagaccca 1225
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aagaaggaagacccaggaag 362 |||||||||||||||||||| Sbjct: 164778 aagaaggaagacccaggaag 164797
>ref|XM_869345.1| PREDICTED: Bos taurus similar to Membrane-associated RING finger protein 4 (Membrane-associated RING-CH protein IV) (MARCH-IV) (LOC617145), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gcgtcccggtgtctccgggg 588 |||||||||||||||||||| Sbjct: 746 gcgtcccggtgtctccgggg 727
>ref|XM_819044.1| Trypanosoma brucei TREU927 clone RPCI93-27F10 hypothetical protein (Tb927.3.670) partial mRNA Length = 1449 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aagaaggaagacccaggaag 362 |||||||||||||||||||| Sbjct: 371 aagaaggaagacccaggaag 352
>gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequence Length = 103609 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 263 ggtacgatgtgctggtggagaacctcatggaccctgcaca 302 ||||||| || ||||| || ||||||||||||||| |||| Sbjct: 72089 ggtacgaggtactggttgaaaacctcatggacccttcaca 72128
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tggcgtcgtacccgagcgtggtgc 124 |||||||||| ||||||||||||| Sbjct: 2808094 tggcgtcgtaaccgagcgtggtgc 2808117
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cgcccagcaccaggacgttctgca 182 ||||| |||||||||||||||||| Sbjct: 24360 cgcccggcaccaggacgttctgca 24383
>emb|CR352217.9| Zebrafish DNA sequence from clone CH211-129P13 in linkage group 15, complete sequence Length = 162948 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gtgcttcgacggccgcggct 34 |||||||||||||||||||| Sbjct: 107917 gtgcttcgacggccgcggct 107898
>gb|AF131950.1| Human papillomavirus candHPV85, complete genome Length = 7812 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gtgcacaagaacagcaaggc 95 |||||||||||||||||||| Sbjct: 535 gtgcacaagaacagcaaggc 554
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ggccgacgcccagcaccaggacgt 176 ||||||||||||||| |||||||| Sbjct: 7578148 ggccgacgcccagcatcaggacgt 7578171
>ref|XM_574384.1| PREDICTED: Rattus norvegicus similar to Zfp93 protein (LOC499093), mRNA Length = 2538 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 acgatgtgctggtggagaacctca 289 |||||||| ||||||||||||||| Sbjct: 389 acgatgtgatggtggagaacctca 412
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 aagcttcgcaagaaggaagaccca 357 |||||||||||||||| ||||||| Sbjct: 1539908 aagcttcgcaagaaggcagaccca 1539931
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 607 gcgttcccgaggaacatcggcgtc 630 ||||||||||||||| |||||||| Sbjct: 1014154 gcgttcccgaggaacgtcggcgtc 1014177
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ggccgacgcccagcaccagg 172 |||||||||||||||||||| Sbjct: 365690 ggccgacgcccagcaccagg 365671
>emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 in linkage group 18, complete sequence Length = 156691 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gtgcttcgacggccgcggct 34 |||||||||||||||||||| Sbjct: 64764 gtgcttcgacggccgcggct 64745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,561,760 Number of Sequences: 3902068 Number of extensions: 3561760 Number of successful extensions: 74427 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 73618 Number of HSP's gapped (non-prelim): 809 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
