ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GNAS_SCHMA (P30669) Guanine nucleotide-binding protein G(s), alp... 28 6.8
2SWI10_SCHPO (Q06182) Mating-type switching protein swi10 27 8.9

>GNAS_SCHMA (P30669) Guanine nucleotide-binding protein G(s), alpha subunit|
           (Adenylate cyclase-stimulating G alpha protein)
          Length = 379

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = -2

Query: 382 YPILTCTPPFQNIRHF----RDFTRRLHTKQNE 296
           YP LTC    +NIR      RD  +R+H +Q E
Sbjct: 345 YPHLTCAVDTENIRRVFNDCRDIIQRMHLRQYE 377



to top

>SWI10_SCHPO (Q06182) Mating-type switching protein swi10|
          Length = 252

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = -2

Query: 286 TLKYVYIHPYVVYSAISK--KSY 224
           +LKY ++HP  +YS ISK  KSY
Sbjct: 84  SLKYHHLHPEYIYSRISKLGKSY 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,625,347
Number of Sequences: 219361
Number of extensions: 871459
Number of successful extensions: 1739
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top