ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1b22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009062.1| Triticum aestivum clone wds1f.pk002.a12:fis, full... 781 0.0
2ref|NM_187680.1| Oryza sativa (japonica cultivar-group), predic... 301 1e-78
3dbj|AK061907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
4dbj|AK066332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
5gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence 268 2e-68
6gb|AY112630.1| Zea mays CL552_1 mRNA sequence 163 8e-37
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
9gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
10gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cance... 42 2.1
11gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 2.1
12gb|AF241729.2| Homo sapiens chromosome X clone RP5-817K2 map p11... 40 8.1
13gb|AF431601.1| Uncultured Verrucomicrobia bacterium clone S51.19... 40 8.1
14gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 8.1
15emb|CR352326.5| Zebrafish DNA sequence from clone CH211-105K20 i... 40 8.1
16gb|AC068058.12| Homo sapiens chromosome 10 clone RP11-285A18, co... 40 8.1
17gb|AC103969.4| Homo sapiens chromosome 15, clone RP11-876F5, com... 40 8.1
18gb|AC022212.4|AC022212 Homo sapiens BAC clone RP11-708E9 from Xq... 40 8.1
19dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.1
20dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.1

>gb|BT009062.1| Triticum aestivum clone wds1f.pk002.a12:fis, full insert mRNA
            sequence
          Length = 1970

 Score =  781 bits (394), Expect = 0.0
 Identities = 511/550 (92%)
 Strand = Plus / Plus

                                                                        
Query: 47   aatctgtcgtcaacattgttggcagtcgagcagtgacacagtatgcagcgaacctttctc 106
            |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 538  aatctgtcgtcaacattgttggcagtcgggcattgacacaatatgcagcgaacctttctc 597

                                                                        
Query: 107  ttctgctcgggtttggagggctattttgggcctttgctgaagcaggggacgtcaggttca 166
            ||||||||||  |||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 598  ttctgctcggcattggtgggctattttgggcctttgcagaagcaggggatgtcaggttca 657

                                                                        
Query: 167  tcgtgttggtgctatgtgcaatcctctgcggctatgtttatcagtgcccgccgttccgat 226
            |||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 658  tcgttttggtgctatgtgcaatcctctgtggttatgtttaccagtgcccgccgttccgat 717

                                                                        
Query: 227  tgagttatcgtggcctaggcgaaccattgtgttttgctgcatttggcccattggctacat 286
            | ||||| || ||||||||||||||||| |||||||||||||||||||||||||| || |
Sbjct: 718  taagttaccgcggcctaggcgaaccattatgttttgctgcatttggcccattggccacgt 777

                                                                        
Query: 287  cagctttctacttctcaaacagcagcagaagcatttcaagcgggactgcgcttctcccta 346
            |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| 
Sbjct: 778  cagctttctacttctcaaacagcagcagaagcatttcaagcggggctgtgcttctccctc 837

                                                                        
Query: 347  tcaccaaaacagtcatagcttcatcgattcttgtcgggttgacaaccacactgatactct 406
            ||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 838  tcagcaaaacagtcgtagcttcatcgattcttgttgggttgacaaccaccctgatactct 897

                                                                        
Query: 407  tctgcagccactttcaccagatcgacggagacagggctgtcggaaagatgtctcccctgg 466
            |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 898  tctgcagccactttcatcagattgacggagatagggctgttggaaagatgtctcccctgg 957

                                                                        
Query: 467  taagaatcggcaccaaaacaggctcgacagtagtaacgcttgcgatcggcgccctctacg 526
            | ||||||||||||||||||||| ||||| |||| ||| ||| |||||||||||||||| 
Sbjct: 958  tcagaatcggcaccaaaacaggcgcgacattagtgacggttgggatcggcgccctctaca 1017

                                                                        
Query: 527  ctctcttggcggctttcggcataagcagatgcctcccgccatcctgcattgtccttggcg 586
            |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1018 ctctcttggctgctttcggcataagcagatgcctcccaccatcctgcattgtccttggcg 1077

                      
Query: 587  ccctgactct 596
            || |||||||
Sbjct: 1078 ccatgactct 1087



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>ref|NM_187680.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score =  301 bits (152), Expect = 1e-78
 Identities = 405/486 (83%), Gaps = 4/486 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gtttacgattcagnataccggtgctgataagnaacaagnaaagnaatctgtcgtcaacat 62
           ||||||||||||| |||| || ||||||||| ||||||  ||| ||||||| || |||||
Sbjct: 364 gtttacgattcag-atactggggctgataag-aacaag--aaggaatctgttgttaacat 419

                                                                       
Query: 63  tgttggcagtcgagcagtgacacagtatgcagcgaacctttctcttctgctcgggtttgg 122
            |||||||||||| |  |||| || ||||| || ||  ||||||| ||| |||| |||  
Sbjct: 420 cgttggcagtcgaacgatgacgcaatatgctgcaaatatttctctcctgttcggatttat 479

                                                                       
Query: 123 agggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatg 182
            ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    ||
Sbjct: 480 ggggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctg 539

                                                                       
Query: 183 tgcaatcctctgcggctatgtttatcagtgcccgccgttccgattgagttatcgtggcct 242
           ||||||| |||| |||||||||||||||||||| || |||||| | |||||  | || ||
Sbjct: 540 tgcaatcatctgtggctatgtttatcagtgcccaccattccgactaagttacaggggact 599

                                                                       
Query: 243 aggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttctc 302
           ||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||||
Sbjct: 600 aggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttctc 659

                                                                       
Query: 303 aaacagcagcagaagcatttcaagcgggactgcgcttctccctatcaccaaaacagtcat 362
           |||||||||||||| |||||| ||||| || || ||||||||| |||  |||||||||||
Sbjct: 660 aaacagcagcagaaacatttccagcggaacagctcttctccctctcagtaaaacagtcat 719

                                                                       
Query: 363 agcttcatcgattcttgtcgggttgacaaccacactgatactcttctgcagccactttca 422
            |||||||| ||||| || ||| |||| || || |||||||||||||||||||| |||||
Sbjct: 720 tgcttcatccattctagttgggctgacgactaccctgatactcttctgcagccattttca 779

                                                                       
Query: 423 ccagatcgacggagacagggctgtcggaaagatgtctcccctggtaagaatcggcaccaa 482
            ||||| || |||||  | ||||| || || |||||||||||||||||||| ||||||||
Sbjct: 780 tcagattgatggagatcgtgctgttgggaaaatgtctcccctggtaagaattggcaccaa 839

                 
Query: 483 aacagg 488
           ||||||
Sbjct: 840 aacagg 845



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>dbj|AK061907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H11, full
           insert sequence
          Length = 1704

 Score =  301 bits (152), Expect = 1e-78
 Identities = 405/486 (83%), Gaps = 4/486 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gtttacgattcagnataccggtgctgataagnaacaagnaaagnaatctgtcgtcaacat 62
           ||||||||||||| |||| || ||||||||| ||||||  ||| ||||||| || |||||
Sbjct: 417 gtttacgattcag-atactggggctgataag-aacaag--aaggaatctgttgttaacat 472

                                                                       
Query: 63  tgttggcagtcgagcagtgacacagtatgcagcgaacctttctcttctgctcgggtttgg 122
            |||||||||||| |  |||| || ||||| || ||  ||||||| ||| |||| |||  
Sbjct: 473 cgttggcagtcgaacgatgacgcaatatgctgcaaatatttctctcctgttcggatttat 532

                                                                       
Query: 123 agggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatg 182
            ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    ||
Sbjct: 533 ggggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctg 592

                                                                       
Query: 183 tgcaatcctctgcggctatgtttatcagtgcccgccgttccgattgagttatcgtggcct 242
           ||||||| |||| |||||||||||||||||||| || |||||| | |||||  | || ||
Sbjct: 593 tgcaatcatctgtggctatgtttatcagtgcccaccattccgactaagttacaggggact 652

                                                                       
Query: 243 aggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttctc 302
           ||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||||
Sbjct: 653 aggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttctc 712

                                                                       
Query: 303 aaacagcagcagaagcatttcaagcgggactgcgcttctccctatcaccaaaacagtcat 362
           |||||||||||||| |||||| ||||| || || ||||||||| |||  |||||||||||
Sbjct: 713 aaacagcagcagaaacatttccagcggaacagctcttctccctctcagtaaaacagtcat 772

                                                                       
Query: 363 agcttcatcgattcttgtcgggttgacaaccacactgatactcttctgcagccactttca 422
            |||||||| ||||| || ||| |||| || || |||||||||||||||||||| |||||
Sbjct: 773 tgcttcatccattctagttgggctgacgactaccctgatactcttctgcagccattttca 832

                                                                       
Query: 423 ccagatcgacggagacagggctgtcggaaagatgtctcccctggtaagaatcggcaccaa 482
            ||||| || |||||  | ||||| || || |||||||||||||||||||| ||||||||
Sbjct: 833 tcagattgatggagatcgtgctgttgggaaaatgtctcccctggtaagaattggcaccaa 892

                 
Query: 483 aacagg 488
           ||||||
Sbjct: 893 aacagg 898



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>dbj|AK066332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C07, full
           insert sequence
          Length = 1800

 Score =  301 bits (152), Expect = 1e-78
 Identities = 405/486 (83%), Gaps = 4/486 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gtttacgattcagnataccggtgctgataagnaacaagnaaagnaatctgtcgtcaacat 62
           ||||||||||||| |||| || ||||||||| ||||||  ||| ||||||| || |||||
Sbjct: 406 gtttacgattcag-atactggggctgataag-aacaag--aaggaatctgttgttaacat 461

                                                                       
Query: 63  tgttggcagtcgagcagtgacacagtatgcagcgaacctttctcttctgctcgggtttgg 122
            |||||||||||| |  |||| || ||||| || ||  ||||||| ||| |||| |||  
Sbjct: 462 cgttggcagtcgaacgatgacgcaatatgctgcaaatatttctctcctgttcggatttat 521

                                                                       
Query: 123 agggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatg 182
            ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    ||
Sbjct: 522 ggggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctg 581

                                                                       
Query: 183 tgcaatcctctgcggctatgtttatcagtgcccgccgttccgattgagttatcgtggcct 242
           ||||||| |||| |||||||||||||||||||| || |||||| | |||||  | || ||
Sbjct: 582 tgcaatcatctgtggctatgtttatcagtgcccaccattccgactaagttacaggggact 641

                                                                       
Query: 243 aggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttctc 302
           ||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||||
Sbjct: 642 aggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttctc 701

                                                                       
Query: 303 aaacagcagcagaagcatttcaagcgggactgcgcttctccctatcaccaaaacagtcat 362
           |||||||||||||| |||||| ||||| || || ||||||||| |||  |||||||||||
Sbjct: 702 aaacagcagcagaaacatttccagcggaacagctcttctccctctcagtaaaacagtcat 761

                                                                       
Query: 363 agcttcatcgattcttgtcgggttgacaaccacactgatactcttctgcagccactttca 422
            |||||||| ||||| || ||| |||| || || |||||||||||||||||||| |||||
Sbjct: 762 tgcttcatccattctagttgggctgacgactaccctgatactcttctgcagccattttca 821

                                                                       
Query: 423 ccagatcgacggagacagggctgtcggaaagatgtctcccctggtaagaatcggcaccaa 482
            ||||| || |||||  | ||||| || || |||||||||||||||||||| ||||||||
Sbjct: 822 tcagattgatggagatcgtgctgttgggaaaatgtctcccctggtaagaattggcaccaa 881

                 
Query: 483 aacagg 488
           ||||||
Sbjct: 882 aacagg 887



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>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score =  268 bits (135), Expect = 2e-68
 Identities = 141/143 (98%)
 Strand = Plus / Plus

                                                                        
Query: 68   gcagtcgagcagtgacacagtatgcagcgaacctttctcttctgctcgggtttggagggc 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3522 gcagtcgagcagtgacacagtatgcagcgaacctttctcttctgctcgggtttggagggc 3581

                                                                        
Query: 128  tattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatgtgcaa 187
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3582 tattttgggcctttgctgaagcaggggacgtcaggttcatggtgttggtgctatgtgcaa 3641

                                   
Query: 188  tcctctgcggctatgtttatcag 210
            |||| ||||||||||||||||||
Sbjct: 3642 tcctttgcggctatgtttatcag 3664



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/71 (92%), Gaps = 4/71 (5%)
 Strand = Plus / Plus

                                                                        
Query: 1    acgtttacgattcagnataccggtgctgataagnaacaagnaaagnaatctgtcgtcaac 60
            ||||||||||||||| ||||||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 3361 acgtttacgattcag-ataccggtgctgataag-aacaa-caaag-aatctgtcgtcaac 3416

                       
Query: 61   attgttggcag 71
            |||||||||||
Sbjct: 3417 attgttggcag 3427



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                
Query: 219  gttccgattgagttatcgtggcctaggcgaaccatt 254
            ||||||||| ||||| ||||||||||||||||||||
Sbjct: 3880 gttccgattaagttaccgtggcctaggcgaaccatt 3915



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>gb|AY112630.1| Zea mays CL552_1 mRNA sequence
          Length = 1615

 Score =  163 bits (82), Expect = 8e-37
 Identities = 299/369 (81%), Gaps = 3/369 (0%)
 Strand = Plus / Plus

                                                                       
Query: 123 agggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatg 182
           ||||||| ||||||||||||| |||||   |||  |||| |||||  | |||||| | | 
Sbjct: 494 agggctactttgggcctttgcagaagccaaggatatcagattcattttattggtgatctc 553

                                                                       
Query: 183 tgcaatcctctgcggctatgtttatcagtgcccgccgttccgattgagttatcgtggcct 242
           ||||||| |||| || |||||||| ||||| || || |||||||| || || |  || ||
Sbjct: 554 tgcaatcttctgtggttatgtttaccagtgtcctccattccgattaagctaccaaggact 613

                                                                       
Query: 243 aggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttctc 302
           |||||| || |||||||| ||||||||||| || ||||| ||  |||| || ||||||||
Sbjct: 614 aggcgagccgttgtgtttcgctgcatttggtcctttggcaaccacagccttttacttctc 673

                                                                       
Query: 303 aaacagcagcagaagcatttcaagcgg--ga-ctgcgcttctccctatcaccaaaacagt 359
           ||||||||||  ||  | ||| |||||  || | || ||||||||| |||| ||||||||
Sbjct: 674 aaacagcagcttaaatacttcgagcggaggagcggctcttctccctctcactaaaacagt 733

                                                                       
Query: 360 catagcttcatcgattcttgtcgggttgacaaccacactgatactcttctgcagccactt 419
            |||||||||||  |||| |||||| ||||||| || |||||||||||||||||||| ||
Sbjct: 734 tatagcttcatctgttctcgtcgggctgacaactactctgatactcttctgcagccattt 793

                                                                       
Query: 420 tcaccagatcgacggagacagggctgtcggaaagatgtctcccctggtaagaatcggcac 479
            || |||||||| |||||    || || |||||||||||||| |||||||||||||||||
Sbjct: 794 ccatcagatcgatggagatctcgccgttggaaagatgtctcctctggtaagaatcggcac 853

                    
Query: 480 caaaacagg 488
            ||| ||||
Sbjct: 854 taaagcagg 862



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                           
Query: 241     ctaggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttc 300
               ||||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||
Sbjct: 4680567 ctaggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttc 4680508

                                      
Query: 301     tcaaacagcagcagaagcatttc 323
               |||||||||||||||| ||||||
Sbjct: 4680507 tcaaacagcagcagaaacatttc 4680485



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                           
Query: 337     cttctccctatcaccaaaacagtcatagcttcatcgattcttgtcgggttgacaaccaca 396
               ||||||||| |||  ||||||||||| |||||||| ||||| || ||| |||| || || 
Sbjct: 4680368 cttctccctctcagtaaaacagtcattgcttcatccattctagttgggctgacgactacc 4680309

                                         
Query: 397     ctgatactcttctgcagccactttca 422
               |||||||||||||||||||| |||||
Sbjct: 4680308 ctgatactcttctgcagccattttca 4680283



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                           
Query: 124     gggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatgt 183
               ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    |||
Sbjct: 4680868 gggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctgt 4680809

                                          
Query: 184     gcaatcctctgcggctatgtttatcag 210
               |||||| |||| |||||||||||||||
Sbjct: 4680808 gcaatcatctgtggctatgtttatcag 4680782



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 465     ggtaagaatcggcaccaaaacagg 488
               ||||||||| ||||||||||||||
Sbjct: 4680036 ggtaagaattggcaccaaaacagg 4680013



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                           
Query: 241     ctaggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttc 300
               ||||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||
Sbjct: 4680682 ctaggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttc 4680623

                                      
Query: 301     tcaaacagcagcagaagcatttc 323
               |||||||||||||||| ||||||
Sbjct: 4680622 tcaaacagcagcagaaacatttc 4680600



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                           
Query: 337     cttctccctatcaccaaaacagtcatagcttcatcgattcttgtcgggttgacaaccaca 396
               ||||||||| |||  ||||||||||| |||||||| ||||| || ||| |||| || || 
Sbjct: 4680483 cttctccctctcagtaaaacagtcattgcttcatccattctagttgggctgacgactacc 4680424

                                         
Query: 397     ctgatactcttctgcagccactttca 422
               |||||||||||||||||||| |||||
Sbjct: 4680423 ctgatactcttctgcagccattttca 4680398



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                           
Query: 124     gggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatgt 183
               ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    |||
Sbjct: 4680983 gggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctgt 4680924

                                          
Query: 184     gcaatcctctgcggctatgtttatcag 210
               |||||| |||| |||||||||||||||
Sbjct: 4680923 gcaatcatctgtggctatgtttatcag 4680897



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 465     ggtaagaatcggcaccaaaacagg 488
               ||||||||| ||||||||||||||
Sbjct: 4680151 ggtaagaattggcaccaaaacagg 4680128



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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
              complete sequence
          Length = 148894

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                          
Query: 241    ctaggcgaaccattgtgttttgctgcatttggcccattggctacatcagctttctacttc 300
              ||||| |||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||
Sbjct: 121522 ctaggtgaaccattatgttttgctgcatttggtccattggcaaccacagctttctacttc 121463

                                     
Query: 301    tcaaacagcagcagaagcatttc 323
              |||||||||||||||| ||||||
Sbjct: 121462 tcaaacagcagcagaaacatttc 121440



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                          
Query: 337    cttctccctatcaccaaaacagtcatagcttcatcgattcttgtcgggttgacaaccaca 396
              ||||||||| |||  ||||||||||| |||||||| ||||| || ||| |||| || || 
Sbjct: 121323 cttctccctctcagtaaaacagtcattgcttcatccattctagttgggctgacgactacc 121264

                                        
Query: 397    ctgatactcttctgcagccactttca 422
              |||||||||||||||||||| |||||
Sbjct: 121263 ctgatactcttctgcagccattttca 121238



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                          
Query: 124    gggctattttgggcctttgctgaagcaggggacgtcaggttcatcgtgttggtgctatgt 183
              ||||||||||||||||||||  |||| ||||| | |||||||||  | | |||    |||
Sbjct: 121823 gggctattttgggcctttgcccaagctggggatgccaggttcattttatcggtaacctgt 121764

                                         
Query: 184    gcaatcctctgcggctatgtttatcag 210
              |||||| |||| |||||||||||||||
Sbjct: 121763 gcaatcatctgtggctatgtttatcag 121737



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 465    ggtaagaatcggcaccaaaacagg 488
              ||||||||| ||||||||||||||
Sbjct: 120991 ggtaagaattggcaccaaaacagg 120968



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>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    ttgctgaagcaggggacgtca 160
              |||||||||||||||||||||
Sbjct: 100257 ttgctgaagcaggggacgtca 100237



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 502     acgcttgcgatcggcgccctc 522
               |||||||||||||||||||||
Sbjct: 2714104 acgcttgcgatcggcgccctc 2714124



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>gb|AF241729.2| Homo sapiens chromosome X clone RP5-817K2 map p11.4, complete sequence
          Length = 141582

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ctcaaacagcagcagaagca 319
             ||||||||||||||||||||
Sbjct: 47219 ctcaaacagcagcagaagca 47200



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>gb|AF431601.1| Uncultured Verrucomicrobia bacterium clone S51.19PG 16S ribosomal
           RNA gene, partial sequence
          Length = 556

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 446 tcggaaagatgtctcccctg 465
           ||||||||||||||||||||
Sbjct: 171 tcggaaagatgtctcccctg 152



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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cagtatgcagcgaacctttc 104
               ||||||||||||||||||||
Sbjct: 1305985 cagtatgcagcgaacctttc 1305966



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>emb|CR352326.5| Zebrafish DNA sequence from clone CH211-105K20 in linkage group 13,
             complete sequence
          Length = 174828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ctcaaacagcagcagaagca 319
             ||||||||||||||||||||
Sbjct: 54829 ctcaaacagcagcagaagca 54848



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>gb|AC068058.12| Homo sapiens chromosome 10 clone RP11-285A18, complete sequence
          Length = 168862

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   tgtgttttgctgcatttggc 273
             ||||||||||||||||||||
Sbjct: 38935 tgtgttttgctgcatttggc 38954



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>gb|AC103969.4| Homo sapiens chromosome 15, clone RP11-876F5, complete sequence
          Length = 121054

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ctcaaacagcagcagaagca 319
             ||||||||||||||||||||
Sbjct: 66629 ctcaaacagcagcagaagca 66648



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>gb|AC022212.4|AC022212 Homo sapiens BAC clone RP11-708E9 from Xq23, complete sequence
          Length = 187313

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    ctcaaacagcagcagaagca 319
              ||||||||||||||||||||
Sbjct: 120913 ctcaaacagcagcagaagca 120894



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>dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T22B15
          Length = 112406

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    tttctacttctcaaacagcagcag 314
              ||||| ||||||||||||||||||
Sbjct: 101819 tttcttcttctcaaacagcagcag 101796



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>dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F1M23
          Length = 112684

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   tttctacttctcaaacagcagcag 314
             ||||| ||||||||||||||||||
Sbjct: 84506 tttcttcttctcaaacagcagcag 84483


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,851,292
Number of Sequences: 3902068
Number of extensions: 3851292
Number of successful extensions: 68935
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68809
Number of HSP's gapped (non-prelim): 119
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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