Clone Information

BLAST Search Result

Clone Name	baal1b16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_190040.1\| Oryza sativa (japonica cultivar-group), predic...	472	e-130
2	dbj\|AK060679.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	472	e-130
3	dbj\|AK072525.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	456	e-125
4	gb\|AY109964.1\| Zea mays CL20919_1 mRNA sequence	363	4e-97
5	gb\|BT017515.1\| Zea mays clone EL01N0419B10.c mRNA sequence	329	6e-87
6	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	236	7e-59
7	dbj\|AP003246.3\| Oryza sativa (japonica cultivar-group) genomic D...	236	7e-59
8	gb\|AY108719.1\| Zea mays PCO065126 mRNA sequence	200	4e-48
9	gb\|AC155339.1\| Brassica rapa subsp. pekinensis chromosome Cytoge...	48	0.033
10	gb\|AC155335.1\| Brassica rapa subsp. pekinensis chromosome Cytoge...	48	0.033
11	gb\|AY340999.1\| Aphelenchus avenae glutaredoxin (Glx-1) gene, com...	44	0.52
12	tpg\|BK001744.1\| TPA: TPA_exp: Suid herpesvirus 1, complete genome	44	0.52
13	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	44	0.52
14	gb\|AY108214.1\| Zea mays PCO120120 mRNA sequence	44	0.52
15	gb\|AF065381.1\|AF065381 Pseudorabies virus UL6 protein (UL6) and ...	44	0.52
16	emb\|X97257.1\|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,...	44	0.52
17	gb\|U66829.1\|SHU66829 Suid herpesvirus 1 UL5 gene, partial cds, U...	44	0.52
18	ref\|XM_421916.1\| PREDICTED: Gallus gallus similar to 130kDa-Ins(...	42	2.0
19	gb\|AC149604.1\| Mus musculus BAC clone RP23-472I3 from chromosome...	42	2.0
20	gb\|AC165965.3\| Mus musculus BAC clone RP23-307L24 from chromosom...	42	2.0
21	gb\|AC130721.3\| Mus musculus BAC clone RP24-333B3 from chromosome...	42	2.0
22	gb\|AC121846.3\| Mus musculus BAC clone RP24-83D6 from chromosome ...	42	2.0
23	gb\|CP000264.1\| Jannaschia sp. CCS1, complete genome	42	2.0
24	gb\|BC111333.1\| Bos taurus cDNA clone MGC:133787 IMAGE:8046834, c...	42	2.0
25	gb\|AC016735.10\| Homo sapiens BAC clone RP11-391M15 from 2, compl...	42	2.0
26	gb\|AC159317.3\| Mus musculus BAC clone RP23-76I20 from chromosome...	40	8.1
27	ref\|XM_473225.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.1
28	gb\|AC104711.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
29	ref\|XM_813862.1\| Trypanosoma cruzi strain CL Brener hypothetical...	40	8.1
30	gb\|AC161241.18\| Medicago truncatula clone mth2-193c3, complete s...	40	8.1
31	emb\|AL365500.9\| Human DNA sequence from clone RP11-232C13 on chr...	40	8.1
32	gb\|AC123515.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
33	emb\|AL033380.11\|HS462C17 Human DNA sequence from clone RP3-462C1...	40	8.1
34	gb\|AC118456.2\| Homo sapiens chromosome 5 clone CTD-2288B6, compl...	40	8.1
35	emb\|BX571827.10\| Zebrafish DNA sequence from clone CH211-195M20 ...	40	8.1
36	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
37	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
38	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
39	dbj\|AP003293.5\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
40	dbj\|AP003221.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
41	emb\|AL928715.11\| Mouse DNA sequence from clone RP23-373D16 on ch...	40	8.1
42	gb\|AC138306.4\| Mus musculus BAC clone RP24-240E9 from 16, comple...	40	8.1
43	emb\|BX088599.6\| Zebrafish DNA sequence from clone CH211-105N9 in...	40	8.1
44	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
45	emb\|AL662958.3\|OSJN00156 Oryza sativa genomic DNA, chromosome 4,...	40	8.1

>ref|NM_190040.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1374

 Score =  472 bits (238), Expect = e-130
 Identities = 496/580 (85%), Gaps = 2/580 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cgcggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttg 72
            ||||| ||||||||||||||||  |||||  |||| ||||| | |||||||  || || |
Sbjct: 595  cgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctag-agaacaa-aatcttcg 652

                                                                        
Query: 73   tctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaagg 132
            ||||||| || || ||||| ||||| || |||||||| ||||||||||| ||||| ||||
Sbjct: 653  tctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagg 712

                                                                        
Query: 133  gcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacaga 192
            || | ||| |||| |||||||||||||| || ||||||||||||||||| || |||||||
Sbjct: 713  gcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacaga 772

                                                                        
Query: 193  aggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacg 252
            | |||||  | || || |||||||||||||| ||||||||||| || |||||||||||  
Sbjct: 773  aagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcata 832

                                                                        
Query: 253  cctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagca 312
            | ||||||||||| ||||| || || || |||||||| || |||||||| || || ||||
Sbjct: 833  cttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagca 892

                                                                        
Query: 313  ctaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaa 372
            | |||||||||||||| || |||| |||||| || ||||||||||| || ||||||||| 
Sbjct: 893  ccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtac 952

                                                                        
Query: 373  ggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatt 432
            ||||||||||||| ||||||||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 953  ggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatt 1012

                                                                        
Query: 433  tggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtt 492
            |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 1013 tggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggat 1072

                                                                        
Query: 493  tgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccat 552
            | ||||| ||||||||||| ||||| ||||||||  |||||||||| ||||| |||||||
Sbjct: 1073 taaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccat 1132

                                                    
Query: 553  cgttttcttttattaaaggtgtgctacctaaatatttcca 592
            |  ||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 1133 ctctttctttcattaagggtgtactaccaaaatatttcca 1172

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>dbj|AK060679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C10, full
            insert sequence
          Length = 1573

 Score =  472 bits (238), Expect = e-130
 Identities = 496/580 (85%), Gaps = 2/580 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cgcggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttg 72
            ||||| ||||||||||||||||  |||||  |||| ||||| | |||||||  || || |
Sbjct: 613  cgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctag-agaacaa-aatcttcg 670

                                                                        
Query: 73   tctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaagg 132
            ||||||| || || ||||| ||||| || |||||||| ||||||||||| ||||| ||||
Sbjct: 671  tctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagg 730

                                                                        
Query: 133  gcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacaga 192
            || | ||| |||| |||||||||||||| || ||||||||||||||||| || |||||||
Sbjct: 731  gcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacaga 790

                                                                        
Query: 193  aggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacg 252
            | |||||  | || || |||||||||||||| ||||||||||| || |||||||||||  
Sbjct: 791  aagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcata 850

                                                                        
Query: 253  cctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagca 312
            | ||||||||||| ||||| || || || |||||||| || |||||||| || || ||||
Sbjct: 851  cttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagca 910

                                                                        
Query: 313  ctaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaa 372
            | |||||||||||||| || |||| |||||| || ||||||||||| || ||||||||| 
Sbjct: 911  ccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtac 970

                                                                        
Query: 373  ggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatt 432
            ||||||||||||| ||||||||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 971  ggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatt 1030

                                                                        
Query: 433  tggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtt 492
            |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 1031 tggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggat 1090

                                                                        
Query: 493  tgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccat 552
            | ||||| ||||||||||| ||||| ||||||||  |||||||||| ||||| |||||||
Sbjct: 1091 taaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccat 1150

                                                    
Query: 553  cgttttcttttattaaaggtgtgctacctaaatatttcca 592
            |  ||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 1151 ctctttctttcattaagggtgtactaccaaaatatttcca 1190

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>dbj|AK072525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D09, full
            insert sequence
          Length = 1661

 Score =  456 bits (230), Expect = e-125
 Identities = 494/580 (85%), Gaps = 2/580 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cgcggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttg 72
            ||||| ||||||||||||||||  |||||  |||| ||||| | |||||||  || || |
Sbjct: 650  cgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctag-agaacaa-aatcttcg 707

                                                                        
Query: 73   tctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaagg 132
            ||||||| || || ||||| ||||| || |||||||| ||||||||||| ||||| ||||
Sbjct: 708  tctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagg 767

                                                                        
Query: 133  gcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacaga 192
            || | ||| |||| |||||||||||||| || ||||||||||||||||| || |||||||
Sbjct: 768  gcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacaga 827

                                                                        
Query: 193  aggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacg 252
            | |||||  | || || |||||||||||||| ||||||||||| || |||||||||||  
Sbjct: 828  aagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcata 887

                                                                        
Query: 253  cctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagca 312
            | ||| ||||||| ||||| || || || |||||||| || |||||||| || || ||||
Sbjct: 888  cttccggtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagca 947

                                                                        
Query: 313  ctaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaa 372
            | |||||||||||||| || |||| |||||| || ||||||||||| || ||||||||| 
Sbjct: 948  ccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtac 1007

                                                                        
Query: 373  ggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatt 432
            ||||||||||||| ||||| ||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 1008 ggagaggtgctgatagagcggaaatatatagcttggcgttctccaacaatttgcaatatt 1067

                                                                        
Query: 433  tggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtt 492
            |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 1068 tggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggat 1127

                                                                        
Query: 493  tgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccat 552
            | ||||| ||||||||||| ||||| ||||||||  |||||||||| ||||| |||||||
Sbjct: 1128 taaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccat 1187

                                                    
Query: 553  cgttttcttttattaaaggtgtgctacctaaatatttcca 592
            |  ||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 1188 ctctttctttcattaagggtgtactaccaaaatatttcca 1227

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>gb|AY109964.1| Zea mays CL20919_1 mRNA sequence
          Length = 1066

 Score =  363 bits (183), Expect = 4e-97
 Identities = 432/512 (84%), Gaps = 4/512 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttgtct 75
           |||||||||||||| |||| ||||||  |||| ||||| | |||||||  || || ||||
Sbjct: 66  ggcgtccgcctccggcgcgaccgcatcatcgtggtgctcg-agaacaa-aatcttcgtct 123

                                                                       
Query: 76  acaactttgccgacctcaagctcgtgcaccagattgag-acggcgcccaaccccaagggc 134
           |||||||||| ||||| ||||||||||||||||| ||  |     |||||||||||||||
Sbjct: 124 acaactttgcggaccttaagctcgtgcaccagatcgattannnnncccaaccccaagggc 183

                                                                       
Query: 135 ttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacagaag 194
            | ||| | |||||||||||||||||||| || ||||| |||||||| || || | ||||
Sbjct: 184 ctctgcgctgtgtcgcagcagcccgggtcaatcgtgcttgtttgccccggtgccc-gaag 242

                                                                       
Query: 195 gggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacgcc 254
           |||||  | ||||| || |||||||| || ||||||||||||||||||||||| ||| | 
Sbjct: 243 gggcaggttagggtggaacactatggggcaaggaagaccaagtttatcaatgcacacact 302

                                                                       
Query: 255 tcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagcact 314
           ||||| ||| | ||||||||  |||||||||| || || |||||||| || || ||||| 
Sbjct: 303 tcccgcgtctcgtgcttcgcgctgtcgcaggacgggaggctcattgcaactgctagcacc 362

                                                                       
Query: 315 aaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaagg 374
           ||||| |||||||| || |||| |||||| ||||| ||||||||  | ||||||||||||
Sbjct: 363 aagggaacacttgttagaatctacaatgcagctgaaggcaatctcttgcaggaagtaagg 422

                                                                       
Query: 375 agaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatttg 434
           ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 423 agaggtgctgatagagcagaaatatatagcttggctttctcgaataatttgcagtatttg 482

                                                                       
Query: 435 gctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtttg 494
           ||||| || ||||||||||||||||| ||||| |||||| ||||||||||||| || | |
Sbjct: 483 gctgtgtccagtgataaaggaacaatacatgtcttcaatctaaagataaatgtgggatcg 542

                                           
Query: 495 accacaaatgataagcctctgccagctccaga 526
           ||  |||||||||| ||| | || ||||||||
Sbjct: 543 actgcaaatgataaacctatacctgctccaga 574

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>gb|BT017515.1| Zea mays clone EL01N0419B10.c mRNA sequence
          Length = 1082

 Score =  329 bits (166), Expect = 6e-87
 Identities = 430/518 (83%)
 Strand = Plus / Plus

                                                                       
Query: 72  gtctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaag 131
           ||||||||||| || ||||| |||||  |||||||||| || ||   |  ||||||||||
Sbjct: 192 gtctacaacttcgcggaccttaagctgttgcaccagatcgacactttgagcaaccccaag 251

                                                                       
Query: 132 ggcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacag 191
           ||| | ||| | ||||| |||||||||||||| |||||||| |||||||| || || |||
Sbjct: 252 ggcctctgcgccgtgtcacagcagcccgggtccattgtgcttgtttgccctggtgcccag 311

                                                                       
Query: 192 aaggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcac 251
           ||||||||  | ||||| || ||||||    | ||||||||||||||||||||||| |||
Sbjct: 312 aaggggcaggttagggtggaacactataagacaaggaagaccaagtttatcaatgcacac 371

                                                                       
Query: 252 gcctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagc 311
            | ||||| ||||| ||||| || |||||||||||||| || |||||||| || || |||
Sbjct: 372 acttcccgcgtcgcgtgctttgcgttgtcgcaggatgggaggctcattgcgactgctagc 431

                                                                       
Query: 312 actaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagta 371
           || |||||||| ||||| || |||| |||||| ||||| ||||||||  | |||||||||
Sbjct: 432 accaaggggactcttgttagaatctacaatgcagctgaaggcaatctcttgcaggaagta 491

                                                                       
Query: 372 aggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtat 431
           |||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 492 aggagaggtgctgatagagcagaaatatatagcttggctttctcgaatgatttgcagtat 551

                                                                       
Query: 432 ttggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggt 491
           |||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| || 
Sbjct: 552 ttggctgtctccagtgataaaggaacaatacatgtcttcaacttaaagataaatgtggga 611

                                                                       
Query: 492 ttgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtcca 551
           |  ||  ||||||| |||||| ||||  |||| ||  |||| |||||||| || || || 
Sbjct: 612 tcaactgcaaatgacaagcctatgccttctccggatcctgaagttcctcacataaggccc 671

                                                 
Query: 552 tcgttttcttttattaaaggtgtgctacctaaatattt 589
           ||  |||| || ||||| |||||||| || ||||||||
Sbjct: 672 tctctttcattcattaagggtgtgctgccaaaatattt 709

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  236 bits (119), Expect = 7e-59
 Identities = 302/361 (83%), Gaps = 2/361 (0%)
 Strand = Plus / Minus

                                                                            
Query: 13       cgcggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttg 72
                ||||| ||||||||||||||||  |||||  |||| ||||| | |||||||  || || |
Sbjct: 40962767 cgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctag-agaacaa-aatcttcg 40962710

                                                                            
Query: 73       tctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaagg 132
                ||||||| || || ||||| ||||| || |||||||| ||||||||||| ||||| ||||
Sbjct: 40962709 tctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagg 40962650

                                                                            
Query: 133      gcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacaga 192
                || | ||| |||| |||||||||||||| || ||||||||||||||||| || |||||||
Sbjct: 40962649 gcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacaga 40962590

                                                                            
Query: 193      aggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacg 252
                | |||||  | || || |||||||||||||| ||||||||||| || |||||||||||  
Sbjct: 40962589 aagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcata 40962530

                                                                            
Query: 253      cctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagca 312
                | ||||||||||| ||||| || || || |||||||| || |||||||| || || ||||
Sbjct: 40962529 cttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagca 40962470

                                                                            
Query: 313      ctaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaa 372
                | |||||||||||||| || |||| |||||| || ||||||||||| || ||||||||||
Sbjct: 40962469 ccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtaa 40962410

                 
Query: 373      g 373
                |
Sbjct: 40962409 g 40962409



 Score =  222 bits (112), Expect = 1e-54
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                            
Query: 373      ggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatt 432
                ||||||||||||| ||||||||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 40960335 ggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatt 40960276

                                                                            
Query: 433      tggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtt 492
                |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 40960275 tggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggat 40960216

                                                                            
Query: 493      tgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccat 552
                | ||||| ||||||||||| ||||| ||||||||  |||||||||| ||||| |||||||
Sbjct: 40960215 taaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccat 40960156

                                
Query: 553      cgttttcttttattaa 568
                |  ||||||| |||||
Sbjct: 40960155 ctctttctttcattaa 40960140



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 427      agtatttggctgtatctagt 446
                ||||||||||||||||||||
Sbjct: 33883104 agtatttggctgtatctagt 33883085

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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score =  236 bits (119), Expect = 7e-59
 Identities = 302/361 (83%), Gaps = 2/361 (0%)
 Strand = Plus / Minus

                                                                         
Query: 13    cgcggcgtccgcctccgccgcgnccgcattgtcgtcgtgctggnagaacaagnatatttg 72
             ||||| ||||||||||||||||  |||||  |||| ||||| | |||||||  || || |
Sbjct: 91192 cgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctag-agaacaa-aatcttcg 91135

                                                                         
Query: 73    tctacaactttgccgacctcaagctcgtgcaccagattgagacggcgcccaaccccaagg 132
             ||||||| || || ||||| ||||| || |||||||| ||||||||||| ||||| ||||
Sbjct: 91134 tctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagg 91075

                                                                         
Query: 133   gcttgtgctcggtgtcgcagcagcccgggtctattgtgctggtttgcccgggcgcacaga 192
             || | ||| |||| |||||||||||||| || ||||||||||||||||| || |||||||
Sbjct: 91074 gcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacaga 91015

                                                                         
Query: 193   aggggcaaatcagggtcgagcactatggtgctaggaagaccaagtttatcaatgcgcacg 252
             | |||||  | || || |||||||||||||| ||||||||||| || |||||||||||  
Sbjct: 91014 aagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcata 90955

                                                                         
Query: 253   cctcccgtgtcgcctgcttcgccttgtcgcaggatggaagactcattgccaccgcaagca 312
             | ||||||||||| ||||| || || || |||||||| || |||||||| || || ||||
Sbjct: 90954 cttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagca 90895

                                                                         
Query: 313   ctaaggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaa 372
             | |||||||||||||| || |||| |||||| || ||||||||||| || ||||||||||
Sbjct: 90894 ccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtaa 90835

              
Query: 373   g 373
             |
Sbjct: 90834 g 90834



 Score =  222 bits (112), Expect = 1e-54
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                         
Query: 373   ggagaggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatt 432
             ||||||||||||| ||||||||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 88760 ggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatt 88701

                                                                         
Query: 433   tggctgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtt 492
             |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 88700 tggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggat 88641

                                                                         
Query: 493   tgaccacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccat 552
             | ||||| ||||||||||| ||||| ||||||||  |||||||||| ||||| |||||||
Sbjct: 88640 taaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccat 88581

                             
Query: 553   cgttttcttttattaa 568
             |  ||||||| |||||
Sbjct: 88580 ctctttctttcattaa 88565

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>gb|AY108719.1| Zea mays PCO065126 mRNA sequence
          Length = 774

 Score =  200 bits (101), Expect = 4e-48
 Identities = 230/273 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggggacacttgtcaggatcttcaatgccgctgagggcaatcttctccaggaagtaaggag 376
           |||||| ||||| || |||| |||||| ||||| |||||||| || ||||||||||||||
Sbjct: 8   ggggactcttgttagaatctacaatgcagctgaaggcaatctcctgcaggaagtaaggag 67

                                                                       
Query: 377 aggtgctgacagagcagaaatatatagcttggctttctcaaataatttacagtatttggc 436
           ||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 68  aggtgctgatagagcagaaatatatagcttggctttctcgaatgatttgcagtatttggc 127

                                                                       
Query: 437 tgtatctagtgataaaggaacaattcatgtgttcaatttaaagataaatgttggtttgac 496
           ||| ||  |||||||||||||||| ||||| ||||| |||||||||||||| || |  ||
Sbjct: 128 tgtctccggtgataaaggaacaatacatgtcttcaacttaaagataaatgtgggatcaac 187

                                                                       
Query: 497 cacaaatgataagcctctgccagctccagaagctgatgttcctcatatgagtccatcgtt 556
             ||||||| |||||| ||||  |||| ||  |||| |||||||| || || || ||  |
Sbjct: 188 tgcaaatgacaagcctatgccttctccggatcctgaagttcctcacataaggccctctct 247

                                            
Query: 557 ttcttttattaaaggtgtgctacctaaatattt 589
           ||| || ||||| |||||||| || ||||||||
Sbjct: 248 ttcattcattaagggtgtgctgccaaaatattt 280

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>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH015H17, complete sequence
          Length = 110885

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 372  aggagaggtgctgacagagcagaaatatatagcttggctttctc 415
            ||||| ||||| || |||||||| |||||||| |||||||||||
Sbjct: 2090 aggaggggtgcagatagagcagagatatatagtttggctttctc 2047

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>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH001H24, complete sequence
          Length = 118144

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 372   aggagaggtgctgacagagcagaaatatatagcttggctttctc 415
             ||||| ||||| || |||||||| |||||||| |||||||||||
Sbjct: 88241 aggaggggtgcagatagagcagagatatatagtttggctttctc 88198

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>gb|AY340999.1| Aphelenchus avenae glutaredoxin (Glx-1) gene, complete cds
          Length = 426

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 263 cgcctgcttcgccttgtcgcag 284
           ||||||||||||||||||||||
Sbjct: 108 cgcctgcttcgccttgtcgcag 87

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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 13    cgcggcgtccgcctccgccgcg 34
             ||||||||||||||||||||||
Sbjct: 87090 cgcggcgtccgcctccgccgcg 87111

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 13      cgcggcgtccgcctccgccgcg 34
               ||||||||||||||||||||||
Sbjct: 3810818 cgcggcgtccgcctccgccgcg 3810839

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>gb|AY108214.1| Zea mays PCO120120 mRNA sequence
          Length = 1210

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 383 tgacagagcagaaatatatagc 404
           ||||||||||||||||||||||
Sbjct: 325 tgacagagcagaaatatatagc 346

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>gb|AF065381.1|AF065381 Pseudorabies virus UL6 protein (UL6) and UL7 protein (UL7) genes,
            complete cds
          Length = 2539

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 13   cgcggcgtccgcctccgccgcg 34
            ||||||||||||||||||||||
Sbjct: 2124 cgcggcgtccgcctccgccgcg 2103

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>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes
          Length = 11059

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 13   cgcggcgtccgcctccgccgcg 34
            ||||||||||||||||||||||
Sbjct: 8740 cgcggcgtccgcctccgccgcg 8761

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>gb|U66829.1|SHU66829 Suid herpesvirus 1 UL5 gene, partial cds, UL6 and UL7 genes, complete
            cds, UL8 gene, partial cds
          Length = 3250

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 13   cgcggcgtccgcctccgccgcg 34
            ||||||||||||||||||||||
Sbjct: 2236 cgcggcgtccgcctccgccgcg 2215

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>ref|XM_421916.1| PREDICTED: Gallus gallus similar to 130kDa-Ins(1,4,5)P3 binding
           protein (LOC424060), partial mRNA
          Length = 3264

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 389 agcagaaatatatagcttggctttctcaa 417
           |||||||||||  ||||||||||||||||
Sbjct: 462 agcagaaatatcgagcttggctttctcaa 434

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>gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome 15, complete sequence
          Length = 177501

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 398    atatagcttggctttctcaaa 418
              |||||||||||||||||||||
Sbjct: 110450 atatagcttggctttctcaaa 110430

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>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence
          Length = 209230

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 405    ttggctttctcaaataattta 425
              |||||||||||||||||||||
Sbjct: 181740 ttggctttctcaaataattta 181720

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>gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome 6, complete sequence
          Length = 149502

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 405   ttggctttctcaaataattta 425
             |||||||||||||||||||||
Sbjct: 97315 ttggctttctcaaataattta 97335

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>gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome 15, complete sequence
          Length = 182309

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 398    atatagcttggctttctcaaa 418
              |||||||||||||||||||||
Sbjct: 155774 atatagcttggctttctcaaa 155794

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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 11      gccgcggcgtccgcctccgcc 31
               |||||||||||||||||||||
Sbjct: 2845490 gccgcggcgtccgcctccgcc 2845510

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>gb|BC111333.1| Bos taurus cDNA clone MGC:133787 IMAGE:8046834, complete cds
          Length = 1960

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 189  cagaaggggcaaatcagggtc 209
            |||||||||||||||||||||
Sbjct: 1050 cagaaggggcaaatcagggtc 1030

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>gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, complete sequence
          Length = 182730

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 423  ttacagtatttggctgtatct 443
            |||||||||||||||||||||
Sbjct: 3004 ttacagtatttggctgtatct 2984

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>gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome 16, complete
            sequence
          Length = 224160

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  tccaggaagtaaggagaggt 380
            ||||||||||||||||||||
Sbjct: 9766 tccaggaagtaaggagaggt 9785

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>ref|XM_473225.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 459

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  gccgcggcgtccgcctccgccgcg 34
           ||||||||||||||| ||||||||
Sbjct: 152 gccgcggcgtccgccgccgccgcg 129

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>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    gccgcggcgtccgcctccgccgcg 34
             ||||||||| ||||||||||||||
Sbjct: 81498 gccgcggcggccgcctccgccgcg 81521

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>ref|XM_813862.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508257.230) partial mRNA
          Length = 7779

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 193  aggggcaaatcagggtcgag 212
            ||||||||||||||||||||
Sbjct: 3353 aggggcaaatcagggtcgag 3334

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>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence
          Length = 125129

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 373   ggagaggtgctgacagagcagaaatatatagc 404
             |||||||||||||| |||| || |||||||||
Sbjct: 49130 ggagaggtgctgaccgagccgagatatatagc 49099

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>emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chromosome 10 Contains
            the 5' end of a novel gene, complete sequence
          Length = 153558

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  agctccagaagctgatgttcctca 541
            |||| |||||||||||||||||||
Sbjct: 6912 agctgcagaagctgatgttcctca 6935

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>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0033E08, complete sequence
          Length = 149241

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    gccgcggcgtccgcctccgccgcg 34
             ||||||||||||||| ||||||||
Sbjct: 30215 gccgcggcgtccgccgccgccgcg 30238

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>emb|AL033380.11|HS462C17 Human DNA sequence from clone RP3-462C17 on chromosome 6p21.1, complete
             sequence
          Length = 118112

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 508   agcctctgccagctccagaagctg 531
             |||| |||||||||||||||||||
Sbjct: 30363 agcccctgccagctccagaagctg 30386

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>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence
          Length = 121822

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   ttctccaggaagtaaggaga 377
             ||||||||||||||||||||
Sbjct: 81404 ttctccaggaagtaaggaga 81423

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>emb|BX571827.10| Zebrafish DNA sequence from clone CH211-195M20 in linkage group 19,
             complete sequence
          Length = 114534

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   gaacaattcatgtgttcaatttaa 477
             ||||||||||| ||||||||||||
Sbjct: 21817 gaacaattcatatgttcaatttaa 21840

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 11       gccgcggcgtccgcctccgccgcg 34
                ||||||||||||||| ||||||||
Sbjct: 26095842 gccgcggcgtccgccgccgccgcg 26095819

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      gccgcggcgtccgcctccgccgcg 34
               ||||||||||||||| ||||||||
Sbjct: 5694658 gccgcggcgtccgccgccgccgcg 5694681

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 11       gccgcggcgtccgcctccgccgcg 34
                ||||||||| ||||||||||||||
Sbjct: 16582759 gccgcggcggccgcctccgccgcg 16582782

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>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0691E06
          Length = 166497

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    agtatttggctgtatctagt 446
              ||||||||||||||||||||
Sbjct: 122151 agtatttggctgtatctagt 122132

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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   agtatttggctgtatctagt 446
             ||||||||||||||||||||
Sbjct: 14547 agtatttggctgtatctagt 14528

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>emb|AL928715.11| Mouse DNA sequence from clone RP23-373D16 on chromosome 2, complete
             sequence
          Length = 136862

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   gcctctgccagctccagaag 528
             ||||||||||||||||||||
Sbjct: 78963 gcctctgccagctccagaag 78944

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>gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, complete sequence
          Length = 170196

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tccaggaagtaaggagaggt 380
             ||||||||||||||||||||
Sbjct: 64281 tccaggaagtaaggagaggt 64262

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>emb|BX088599.6| Zebrafish DNA sequence from clone CH211-105N9 in linkage group 20,
              complete sequence
          Length = 161647

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 455    aacaattcatgtgttcaatttaaa 478
              ||||||||||||||| ||||||||
Sbjct: 141401 aacaattcatgtgttgaatttaaa 141378

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      gccgcggcgtccgcctccgccgcg 34
               ||||||||||||||| ||||||||
Sbjct: 5761135 gccgcggcgtccgccgccgccgcg 5761158

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>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     gccgcggcgtccgcctccgccgcg 34
              ||||||||||||||| ||||||||
Sbjct: 130169 gccgcggcgtccgccgccgccgcg 130146


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,194,540
Number of Sequences: 3902068
Number of extensions: 5194540
Number of successful extensions: 111363
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110923
Number of HSP's gapped (non-prelim): 432
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result