ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1b04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1108 bits (559), Expect = 0.0 Identities = 575/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119581 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119523 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119522 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119463 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119462 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttaata 119404 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119403 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119344 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119343 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119284 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119283 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119224 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119223 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119164 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119163 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 119104 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 119044 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 119043 tcaccagctaaggcccctaaatgaccgctcagtgataa 119006 Score = 1108 bits (559), Expect = 0.0 Identities = 575/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95313 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95371 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95372 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95431 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95432 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttaata 95490 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95491 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95550 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95551 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95610 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95611 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 95670 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95671 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 95730 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95731 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 95790 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95791 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 95850 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 95851 tcaccagctaaggcccctaaatgaccgctcagtgataa 95888
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118362 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 118304 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118303 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 118244 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 118243 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 118185 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 118125 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118124 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 118065 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118064 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 118005 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118004 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 117945 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117944 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 117885 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117884 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 117825 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 117824 tcaccagctaaggcccctaaatgaccgctcagtgataa 117787
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119446 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119388 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119387 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 119327 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 119269 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119268 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119209 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119208 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119149 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119148 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119089 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119088 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119029 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119028 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118969 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118968 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118909 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 118908 tcaccagctaaggcccctaaatgaccgctcagtgataa 118871 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95710 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95768 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95828 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 95829 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 95887 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95947 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96007 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96067 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96127 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96187 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96247 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 96248 tcaccagctaaggcccctaaatgaccgctcagtgataa 96285
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119446 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119388 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119387 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 119327 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 119269 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119268 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119209 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119208 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119149 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119148 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119089 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119088 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119029 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119028 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118969 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118968 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118909 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 118908 tcaccagctaaggcccctaaatgaccgctcagtgataa 118871 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95710 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95768 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95828 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 95829 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 95887 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95947 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96007 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96067 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96127 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96187 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96247 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 96248 tcaccagctaaggcccctaaatgaccgctcagtgataa 96285
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119395 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119337 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119277 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 119276 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 119218 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119217 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119158 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119157 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119098 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119097 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119038 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119037 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118978 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118977 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118918 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118917 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118858 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 118857 tcaccagctaaggcccctaaatgaccgctcagtgataa 118820 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95655 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95713 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95714 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95773 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 95774 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 95832 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95833 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95892 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95893 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95952 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95953 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96012 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96013 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96072 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96073 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96132 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96133 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96192 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 96193 tcaccagctaaggcccctaaatgaccgctcagtgataa 96230
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31508288 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 31508346 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508347 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 31508406 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 31508407 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 31508465 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508466 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 31508525 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508526 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 31508585 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508586 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 31508645 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508646 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 31508705 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508706 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 31508765 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508766 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 31508825 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 31508826 tcaccagctaaggcccctaaatgaccgctcagtgataa 31508863 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 503 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 563 aatgaccgctcagtgataa 581 ||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataa 11513239 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 519 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 578 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 579 taa 581 ||| Sbjct: 25722118 taa 25722116 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 421 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 475 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84308 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 84250 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84249 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 84190 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 84189 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 84131 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84130 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 84071 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84070 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 84011 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84010 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 83951 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83950 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 83891 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83890 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 83831 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83830 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 83771 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 83770 tcaccagctaaggcccctaaatgaccgctcagtgataa 83733
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119415 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119357 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119356 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119297 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 119296 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 119238 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119237 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119178 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119118 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119117 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119058 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118998 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118938 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118878 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 118877 tcaccagctaaggcccctaaatgaccgctcagtgataa 118840 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95703 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95761 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95762 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95821 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 95822 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 95880 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95881 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95940 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95941 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96000 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96001 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96060 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96061 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96120 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96121 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96180 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96181 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96240 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 96241 tcaccagctaaggcccctaaatgaccgctcagtgataa 96278
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14477 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 14535 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14536 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 14595 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 14596 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 14654 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14655 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 14714 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14715 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 14774 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14775 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 14834 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14835 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 14894 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14895 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 14954 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14955 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 15014 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 15015 tcaccagctaaggcccctaaatgaccgctcagtgataa 15052 Score = 1076 bits (543), Expect = 0.0 Identities = 572/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122752 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 122810 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122811 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 122870 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 122871 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 122929 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 122930 gggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaag 122988 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122989 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 123048 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123049 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 123108 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123109 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 123168 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123169 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 123228 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123229 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 123288 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 123289 tcaccagctaaggcccctaaatgaccgctcagtgataa 123326
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141285 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 141343 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141344 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 141403 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 141404 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 141462 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141463 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 141522 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141523 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 141582 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141583 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 141642 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141643 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 141702 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141703 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 141762 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141763 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 141822 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 141823 tcaccagctaaggcccctaaatgaccgctcagtgataa 141860
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 58134 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 58076 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58075 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58016 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 58015 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 57957 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57956 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 57897 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57896 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 57837 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57836 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 57777 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57776 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 57717 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57716 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 57657 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57656 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 57597 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 57596 tcaccagctaaggcccctaaatgaccgctcagtgataa 57559
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9268637 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 9268695 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268696 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9268755 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 9268756 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 9268814 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268815 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9268874 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268875 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9268934 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268935 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9268994 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268995 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9269054 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269055 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9269114 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269115 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9269174 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 9269175 tcaccagctaaggcccctaaatgaccgctcagtgataa 9269212 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9056551 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 9056609 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056610 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9056669 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 9056670 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 9056728 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056729 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9056788 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056789 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9056848 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056849 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9056908 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056909 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9056968 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056969 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9057028 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057029 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9057088 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 9057089 tcaccagctaaggcccctaaatgaccgctcagtgataa 9057126 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9228137 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 9228195 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228196 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9228255 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 9228256 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 9228314 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9228315 gggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaag 9228374 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228375 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9228434 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228435 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9228494 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228495 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9228554 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228555 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9228614 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228615 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9228674 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 9228675 tcaccagctaaggcccctaaatgaccgctcagtgataa 9228712 Score = 1076 bits (543), Expect = 0.0 Identities = 572/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9164726 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 9164784 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164785 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9164844 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 9164845 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 9164903 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 9164904 gggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaag 9164962 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164963 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9165022 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165023 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9165082 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165083 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9165142 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165143 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9165202 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165203 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9165262 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 9165263 tcaccagctaaggcccctaaatgaccgctcagtgataa 9165300 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 25171474 aaagaacccccagtgggtagtgaaatag-aacatgaaaccgtgctgagctcccaagcagt 25171416 Query: 64 gggagggga 72 || |||||| Sbjct: 25171415 ggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19938622 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 19938680 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938681 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 19938740 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 19938741 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 19938799 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938800 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 19938859 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938860 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 19938919 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938920 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 19938979 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938980 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 19939039 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939040 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 19939099 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939100 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 19939159 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 19939160 tcaccagctaaggcccctaaatgaccgctcagtgataa 19939197 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10276809 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 10276751 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276750 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10276691 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 10276690 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 10276632 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276631 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10276572 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276571 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10276512 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276511 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10276452 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276451 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10276392 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276391 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10276332 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276331 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10276272 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 10276271 tcaccagctaaggcccctaaatgaccgctcagtgataa 10276234 Score = 1098 bits (554), Expect = 0.0 Identities = 573/577 (99%), Gaps = 2/577 (0%) Strand = Plus / Plus Query: 5 aagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagtg 64 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387490 aagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagtg 10387548 Query: 65 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 10387608 Query: 125 agtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatag 184 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 10387609 agtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatag 10387667 Query: 185 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387668 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 10387727 Query: 245 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387728 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10387787 Query: 305 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387788 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10387847 Query: 365 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387848 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10387907 Query: 425 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387908 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10387967 Query: 485 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387968 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10388027 Query: 545 caccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| Sbjct: 10388028 caccagctaaggcccctaaatgaccgctcagtgataa 10388064 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 428 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 487 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 488 tcggccagtgagacgatgggggataagcttcatcgtcgagag 529 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31598804 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 31598862 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598863 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 31598922 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 31598923 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 31598981 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598982 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 31599041 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599042 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 31599101 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599102 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 31599161 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599162 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 31599221 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599222 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 31599281 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599282 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 31599341 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 31599342 tcaccagctaaggcccctaaatgaccgctcagtgataa 31599379 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 503 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 563 aatgaccgctcagtgataa 581 ||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataa 11510002 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 519 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 578 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 579 taa 581 ||| Sbjct: 25813427 taa 25813425 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 421 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 475 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 33526120 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 33526178 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526179 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 33526238 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 33526239 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 33526297 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526298 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 33526357 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526358 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 33526417 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526418 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 33526477 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526478 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 33526537 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526538 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 33526597 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526598 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 33526657 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 33526658 tcaccagctaaggcccctaaatgaccgctcagtgataa 33526695 Score = 266 bits (134), Expect = 7e-68 Identities = 149/153 (97%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 16678084 aaagaacccccagtgggtaatgaaatag-aacgtgaaaccgtgctgagctcccaaccagt 16678026 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678025 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 16677966 Query: 124 cagtggcttggttaagggaacggaacccaccgg 156 ||||||||||||||||||||||||||||||||| Sbjct: 16677965 cagtggcttggttaagggaacggaacccaccgg 16677933 Score = 168 bits (85), Expect = 1e-38 Identities = 103/108 (95%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||| || |||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 32744769 aaagaacccctagggggtagtgaaatag-aacgtgaaacagtgctgagctcccaagcagt 32744711 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 111 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744710 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 512 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 571 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 572 tcagtgataa 581 |||||||||| Sbjct: 527811 tcagtgataa 527820
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47421 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 47363 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47362 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47303 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 47302 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 47244 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47243 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 47184 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47183 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 47124 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47123 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 47064 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47063 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 47004 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47003 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 46944 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46943 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 46884 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 46883 tcaccagctaaggcccctaaatgaccgctcagtgataa 46846
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 71317 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 71375 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71376 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 71435 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 71436 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 71494 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71495 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 71554 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71555 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 71614 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71615 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 71674 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71675 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 71734 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71735 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 71794 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71795 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 71854 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 71855 tcaccagctaaggcccctaaatgaccgctcagtgataa 71892
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 89 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 147 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 207 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 208 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 266 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 326 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 386 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 446 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 506 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 566 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 626 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 627 tcaccagctaaggcccctaaatgaccgctcagtgataa 664
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 284 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 342 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 402 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 403 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 461 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 521 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 581 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 641 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 701 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 761 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 821 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 822 tcaccagctaaggcccctaaatgaccgctcagtgataa 859
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 396 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 454 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 514 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 515 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 573 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 633 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 693 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 753 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 813 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 873 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 933 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 934 tcaccagctaaggcccctaaatgaccgctcagtgataa 971
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 155 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 213 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 273 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 274 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 332 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 392 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 452 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 512 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 572 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 632 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 692 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 693 tcaccagctaaggcccctaaatgaccgctcagtgataa 730
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 286 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 344 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 404 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 405 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 463 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 523 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 583 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 643 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 703 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 763 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 823 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 824 tcaccagctaaggcccctaaatgaccgctcagtgataa 861
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 284 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 342 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 402 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 403 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 461 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 521 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 581 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 641 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 701 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 761 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 821 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 822 tcaccagctaaggcccctaaatgaccgctcagtgataa 859
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 286 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 344 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 404 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 405 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 463 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 523 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 583 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 643 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 703 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 763 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 823 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 824 tcaccagctaaggcccctaaatgaccgctcagtgataa 861
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19949898 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 19949956 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949957 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 19950016 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 19950017 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 19950075 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950076 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 19950135 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950136 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 19950195 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950196 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 19950255 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950256 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 19950315 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950316 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 19950375 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950376 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 19950435 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 19950436 tcaccagctaaggcccctaaatgaccgctcagtgataa 19950473 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10282848 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 10282790 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282789 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10282730 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 10282729 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 10282671 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282670 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10282611 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282610 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10282551 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282550 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10282491 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282490 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10282431 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282430 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10282371 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282370 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10282311 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 10282310 tcaccagctaaggcccctaaatgaccgctcagtgataa 10282273 Score = 1098 bits (554), Expect = 0.0 Identities = 573/577 (99%), Gaps = 2/577 (0%) Strand = Plus / Plus Query: 5 aagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagtg 64 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393529 aagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagtg 10393587 Query: 65 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393588 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 10393647 Query: 125 agtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatag 184 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 10393648 agtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatag 10393706 Query: 185 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393707 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 10393766 Query: 245 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393767 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10393826 Query: 305 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393827 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10393886 Query: 365 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393887 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10393946 Query: 425 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393947 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10394006 Query: 485 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394007 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10394066 Query: 545 caccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| Sbjct: 10394067 caccagctaaggcccctaaatgaccgctcagtgataa 10394103 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 428 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 487 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 488 tcggccagtgagacgatgggggataagcttcatcgtcgagag 529 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119389 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 119331 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119330 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119271 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 119270 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 119212 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119152 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119092 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119032 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118972 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118912 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118852 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 118851 tcaccagctaaggcccctaaatgaccgctcagtgataa 118814 Score = 1100 bits (555), Expect = 0.0 Identities = 574/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95650 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 95708 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95768 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 95769 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 95827 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95828 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95887 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95947 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96007 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96067 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96127 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96187 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 96188 tcaccagctaaggcccctaaatgaccgctcagtgataa 96225
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1098 bits (554), Expect = 0.0 Identities = 573/577 (99%), Gaps = 2/577 (0%) Strand = Plus / Plus Query: 5 aagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagtg 64 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93882 aagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagtg 93940 Query: 65 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93941 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 94000 Query: 125 agtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatag 184 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 94001 agtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatag 94059 Query: 185 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94060 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 94119 Query: 245 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94120 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 94179 Query: 305 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94180 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 94239 Query: 365 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94240 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 94299 Query: 425 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94300 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 94359 Query: 485 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94360 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 94419 Query: 545 caccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| Sbjct: 94420 caccagctaaggcccctaaatgaccgctcagtgataa 94456
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1098 bits (554), Expect = 0.0 Identities = 573/577 (99%), Gaps = 2/577 (0%) Strand = Plus / Plus Query: 5 aagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagtg 64 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27946 aagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagtg 28004 Query: 65 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28005 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 28064 Query: 125 agtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatag 184 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 28065 agtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatag 28123 Query: 185 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28124 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 28183 Query: 245 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28184 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 28243 Query: 305 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28244 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 28303 Query: 365 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28304 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 28363 Query: 425 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28364 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 28423 Query: 485 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28424 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 28483 Query: 545 caccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| Sbjct: 28484 caccagctaaggcccctaaatgaccgctcagtgataa 28520
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1094 bits (552), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 105 aaagaacccccagtgggtagtgaaatagga-cgtgaaaccgtgctgagctcccaagcagt 163 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 223 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 224 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 282 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 342 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 402 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 462 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 522 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 582 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 642 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 643 tcaccagctaaggcccctaaatgaccgctcagtgataa 680
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20712 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 20770 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20771 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 20830 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 20831 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 20889 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20890 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 20949 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20950 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 21009 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21010 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 21069 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21070 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 21129 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21130 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 21189 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21190 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 21249 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 21250 tcaccagctaaggcccctaaatgaccgctcagtgataa 21287 Score = 1055 bits (532), Expect = 0.0 Identities = 570/579 (98%), Gaps = 3/579 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 44406 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 44348 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44347 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 44288 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||| ||| Sbjct: 44287 cagtggcttggttaagggaatggaaccctccgg-agccgtagtgaaagcgagtcttcata 44229 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44228 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 44169 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44168 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 44109 Query: 304 gtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgt 362 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 44108 gtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgt 44049 Query: 363 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44048 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 43989 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43988 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 43929 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43928 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 43869 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||| Sbjct: 43868 atcaccagctaaggcccctaaatgaccgctcagtgataa 43830
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1035 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 977 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 917 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 916 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 858 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 798 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 738 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 678 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 618 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 558 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 498 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 497 tcaccagctaaggcccctaaatgaccgctcagtgataa 460
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123245 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 123187 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123186 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123127 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 123126 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 123068 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123067 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 123008 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123007 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 122948 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122947 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 122888 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 122828 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122827 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 122768 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122767 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 122708 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 122707 tcaccagctaaggcccctaaatgaccgctcagtgataa 122670 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99592 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 99650 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99651 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 99710 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 99711 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 99769 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99770 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 99829 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99830 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 99889 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99890 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 99949 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99950 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 100009 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100010 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100069 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100070 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100129 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 100130 tcaccagctaaggcccctaaatgaccgctcagtgataa 100167
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123962 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 123904 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123903 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123844 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 123843 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 123785 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123784 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 123725 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123724 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 123665 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123664 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 123605 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123604 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 123545 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123544 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 123485 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 123425 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 123424 tcaccagctaaggcccctaaatgaccgctcagtgataa 123387 Score = 1092 bits (551), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100269 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 100327 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100328 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 100387 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 100388 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 100446 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100447 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 100506 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100507 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 100566 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100567 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 100626 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100627 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 100686 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100687 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100746 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100747 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100806 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 100807 tcaccagctaaggcccctaaatgaccgctcagtgataa 100844
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1090 bits (550), Expect = 0.0 Identities = 572/577 (99%), Gaps = 2/577 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 283 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 341 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 402 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 460 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 520 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 cttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 580 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 640 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 700 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 760 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 820 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgata 580 ||||||||||||||||||||||||||||||||||||| Sbjct: 821 tcaccagctaaggcccctaaatgaccgctcagtgata 857
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1084 bits (547), Expect = 0.0 Identities = 572/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9241644 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 9241586 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9241585 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatagg 9241526 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 9241525 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 9241467 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241466 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9241407 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241406 cttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagtt 9241347 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241346 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9241287 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241286 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9241227 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241226 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9241167 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241166 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9241107 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 9241106 tcaccagctaaggcccctaaatgaccgctcagtgataa 9241069 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 393 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 452 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 453 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 512 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 513 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 558 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1084 bits (547), Expect = 0.0 Identities = 572/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 52857 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 52799 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 52798 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatagg 52739 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 52738 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 52680 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52679 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 52620 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52619 cttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagtt 52560 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52559 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 52500 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52499 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 52440 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52439 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 52380 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52379 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 52320 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 52319 tcaccagctaaggcccctaaatgaccgctcagtgataa 52282
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1084 bits (547), Expect = 0.0 Identities = 566/570 (99%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 281 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 339 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 399 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 400 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 458 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 518 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 578 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 638 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 698 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 758 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 818 Query: 544 tcaccagctaaggcccctaaatgaccgctc 573 |||||||||||||||||||||||||||||| Sbjct: 819 tcaccagctaaggcccctaaatgaccgctc 848
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1068 bits (539), Expect = 0.0 Identities = 571/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123185 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 123127 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123126 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123067 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 123066 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 123008 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123007 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 122948 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122947 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 122888 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 122828 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122827 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 122769 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122768 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 122709 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122708 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 122649 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||| ||||||||||||||||||| Sbjct: 122648 tcaccagctaaggccccttaatgaccgctcagtgataa 122611 Score = 1068 bits (539), Expect = 0.0 Identities = 571/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99552 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 99610 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99611 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 99670 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 99671 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 99729 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99730 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 99789 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99790 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 99849 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99850 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 99909 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99910 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 99968 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99969 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100028 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100029 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100088 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||| ||||||||||||||||||| Sbjct: 100089 tcaccagctaaggccccttaatgaccgctcagtgataa 100126
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1068 bits (539), Expect = 0.0 Identities = 571/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5905 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 5963 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5964 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 6023 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 6024 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 6082 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6083 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 6142 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6143 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 6202 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6203 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 6262 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6263 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 6321 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6322 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 6381 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6382 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 6441 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||| ||||||||||||||||||| Sbjct: 6442 tcaccagctaaggccccttaatgaccgctcagtgataa 6479
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1068 bits (539), Expect = 0.0 Identities = 571/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 493 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 551 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 611 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 612 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 670 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 730 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 790 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 850 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 851 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 909 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 969 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 1029 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||| ||||||||||||||||||| Sbjct: 1030 tcaccagctaaggccccttaatgaccgctcagtgataa 1067
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1057 bits (533), Expect = 0.0 Identities = 552/556 (99%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 489 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 547 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 607 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 608 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 666 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 726 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 786 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 846 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 906 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 966 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 1026 Query: 544 tcaccagctaaggccc 559 |||||||||||||||| Sbjct: 1027 tcaccagctaaggccc 1042
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1011 bits (510), Expect = 0.0 Identities = 565/580 (97%), Gaps = 4/580 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122727 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 122669 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122668 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcatagg 122609 Query: 124 cagtg--gcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaa 181 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 122608 cagtgtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttca 122550 Query: 182 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122549 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 122490 Query: 242 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 301 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122489 agcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgag 122430 Query: 302 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122429 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 122370 Query: 362 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122369 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 122310 Query: 422 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122309 cgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggat 122250 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122249 tcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctg 122190 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||| |||||| Sbjct: 122189 gatcaccagctaaggcccctaaatgaccgctcaatgataa 122150
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1011 bits (510), Expect = 0.0 Identities = 565/580 (97%), Gaps = 4/580 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825268 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 12825210 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 12825209 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcatagg 12825150 Query: 124 cagtg--gcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaa 181 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 12825149 cagtgtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttca 12825091 Query: 182 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825090 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 12825031 Query: 242 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 301 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825030 agcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgag 12824971 Query: 302 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824970 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 12824911 Query: 362 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824910 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 12824851 Query: 422 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12824850 cgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggat 12824791 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12824790 tcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctg 12824731 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||| |||||| Sbjct: 12824730 gatcaccagctaaggcccctaaatgaccgctcaatgataa 12824691
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 932 bits (470), Expect = 0.0 Identities = 480/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 100 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggnag 159 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg-ag 60 Query: 160 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 219 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggt 120 Query: 220 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 180 Query: 280 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 240 Query: 340 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 300 Query: 400 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 360 Query: 460 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 420 Query: 520 tcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 480 Query: 580 aa 581 || Sbjct: 481 aa 482
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 930 bits (469), Expect = 0.0 Identities = 479/481 (99%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 101 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggnagc 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg-agc 59 Query: 161 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 220 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119 Query: 221 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 179 Query: 281 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 239 Query: 341 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 299 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 359 Query: 461 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 419 Query: 521 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 479 Query: 581 a 581 | Sbjct: 480 a 480
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 926 bits (467), Expect = 0.0 Identities = 489/494 (98%), Gaps = 2/494 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 492 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 434 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 374 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 373 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 315 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 255 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 195 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 75 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 15 Query: 484 aaggtcggccagtg 497 |||||||||||||| Sbjct: 14 aaggtcggccagtg 1
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 914 bits (461), Expect = 0.0 Identities = 551/578 (95%), Gaps = 10/578 (1%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 141618 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 141563 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141562 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 141503 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 141502 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 141449 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141448 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 141389 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141388 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 141329 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141328 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 141269 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 141268 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 141209 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141208 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggta 141149 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141148 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 141089 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 141088 tcaccagctaaggcccctaaatgaccgctcagtgataa 141051 Score = 914 bits (461), Expect = 0.0 Identities = 551/578 (95%), Gaps = 10/578 (1%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 112039 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 112094 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112095 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 112154 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 112155 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 112208 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112209 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 112268 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112269 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 112328 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112329 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 112388 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 112389 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 112448 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112449 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggta 112508 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112509 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 112568 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 112569 tcaccagctaaggcccctaaatgaccgctcagtgataa 112606
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 906 bits (457), Expect = 0.0 Identities = 551/578 (95%), Gaps = 11/578 (1%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 133733 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 133678 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133677 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 133618 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 133617 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 133564 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133563 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 133504 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133503 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 133444 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133443 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 133384 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 133383 gaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgag 133324 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 133323 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtc 133265 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133264 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 133205 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 133204 tcaccagctaaggcccctaaatgaccgctcagtgataa 133167 Score = 906 bits (457), Expect = 0.0 Identities = 551/578 (95%), Gaps = 11/578 (1%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 104238 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 104293 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104294 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 104353 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 104354 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 104407 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104408 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 104467 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104468 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 104527 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104528 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 104587 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 104588 gaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgag 104647 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104648 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtc 104706 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104707 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 104766 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 104767 tcaccagctaaggcccctaaatgaccgctcagtgataa 104804
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 890 bits (449), Expect = 0.0 Identities = 548/578 (94%), Gaps = 14/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 127374 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 127319 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127318 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 127259 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 127258 cagtggcttggttaagggaat-----ccaccg-tagccgtagcgaaagcgagtcttcata 127205 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127204 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 127145 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 127144 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 127085 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127084 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 127025 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 127024 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 126965 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 126964 agcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggtc 126909 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126908 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 126849 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 126848 tcaccagctaaggcccctaaatgaccgctcagtgataa 126811 Score = 890 bits (449), Expect = 0.0 Identities = 548/578 (94%), Gaps = 14/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 107548 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 107603 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107604 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 107663 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 107664 cagtggcttggttaagggaat-----ccaccg-tagccgtagcgaaagcgagtcttcata 107717 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107718 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 107777 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107778 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 107837 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107838 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 107897 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107898 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107957 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 107958 agcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggtc 108013 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108014 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 108073 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 108074 tcaccagctaaggcccctaaatgaccgctcagtgataa 108111
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 884 bits (446), Expect = 0.0 Identities = 551/583 (94%), Gaps = 15/583 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 139096 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 139041 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139040 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 138981 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||| Sbjct: 138980 cagtggcttggttaagggaac-----ccaccgg-agccatagcgaaagcgagtcttcata 138927 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138926 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 138867 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138866 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 138807 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138806 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 138747 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138746 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 138687 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacag 478 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138686 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacag 138627 Query: 479 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138626 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 138567 Query: 539 ccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138566 ccggatcaccagctaaggcccctaaatgaccgctcagtgataa 138524 Score = 884 bits (446), Expect = 0.0 Identities = 551/583 (94%), Gaps = 15/583 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 110849 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 110904 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110905 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 110964 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||| Sbjct: 110965 cagtggcttggttaagggaac-----ccaccgg-agccatagcgaaagcgagtcttcata 111018 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111019 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 111078 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111079 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 111138 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111139 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 111198 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 111199 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 111258 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacag 478 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111259 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacag 111318 Query: 479 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111319 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 111378 Query: 539 ccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111379 ccggatcaccagctaaggcccctaaatgaccgctcagtgataa 111421
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 868 bits (438), Expect = 0.0 Identities = 487/502 (97%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 131046 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 130993 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130992 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 130933 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130932 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 130873 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130872 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 130813 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 130812 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 130753 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130752 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 130693 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130692 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130633 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 130632 ctaaatgaccgctcagtgataa 130611 Score = 868 bits (438), Expect = 0.0 Identities = 487/502 (97%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 103589 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 103642 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103643 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 103702 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103703 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 103762 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103763 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 103822 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 103823 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 103882 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103883 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 103942 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103943 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104002 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 104003 ctaaatgaccgctcagtgataa 104024
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 136447 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 136392 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136391 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 136334 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 136333 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 136280 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136279 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 136220 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136219 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 136160 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136159 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 136100 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 136099 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 136040 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136039 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 135980 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135979 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 135920 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 135919 tcaccagctaaggcccctaaatgaccgctcagtgataa 135882 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 107110 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 107165 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107166 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 107223 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 107224 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 107277 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107278 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 107337 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107338 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 107397 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107398 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 107457 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107458 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107517 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107518 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 107577 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107578 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 107637 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 107638 tcaccagctaaggcccctaaatgaccgctcagtgataa 107675
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135055 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135000 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134999 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 134942 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 134941 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 134888 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134887 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134828 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134827 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134768 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134767 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134708 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134707 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134648 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134647 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 134588 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134587 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 134528 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 134527 tcaccagctaaggcccctaaatgaccgctcagtgataa 134490 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 105981 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106036 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106037 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106094 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106095 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106148 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106149 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106208 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106209 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106268 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106269 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106328 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106329 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106388 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106389 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 106448 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106449 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106508 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106509 tcaccagctaaggcccctaaatgaccgctcagtgataa 106546
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 136101 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 136046 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136045 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135988 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135987 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135934 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135933 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 135874 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135873 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 135814 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135813 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135754 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 135753 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 135694 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135693 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 135634 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135633 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 135574 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 135573 tcaccagctaaggcccctaaatgaccgctcagtgataa 135536 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106324 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106379 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106380 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106437 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106438 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106491 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106492 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106551 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106552 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106611 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106612 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106671 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106672 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106731 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106732 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 106791 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106792 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106851 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106852 tcaccagctaaggcccctaaatgaccgctcagtgataa 106889
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135190 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135135 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135134 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135077 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135076 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135023 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135022 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134963 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134962 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134903 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134902 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134843 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134842 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134783 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134782 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 134723 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134722 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 134663 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 134662 tcaccagctaaggcccctaaatgaccgctcagtgataa 134625 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106153 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106208 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106209 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106266 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106267 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106320 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106321 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106380 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106440 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106441 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106500 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106501 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106560 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106561 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 106620 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106621 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106680 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106681 tcaccagctaaggcccctaaatgaccgctcagtgataa 106718
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135188 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135133 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135132 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135075 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135074 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135021 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135020 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134961 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134960 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134901 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134900 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134841 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134840 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134781 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134780 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 134721 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134720 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 134661 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 134660 tcaccagctaaggcccctaaatgaccgctcagtgataa 134623 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106150 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106205 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106206 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106263 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106264 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106317 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106318 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106377 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106378 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106437 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106438 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106497 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106498 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106557 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106558 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 106617 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106618 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106677 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106678 tcaccagctaaggcccctaaatgaccgctcagtgataa 106715
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135100 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135045 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135044 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 134987 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 134986 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 134933 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134932 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134873 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134872 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134813 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134812 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134753 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134752 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134693 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134692 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 134633 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134632 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 134573 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 134572 tcaccagctaaggcccctaaatgaccgctcagtgataa 134535 Score = 868 bits (438), Expect = 0.0 Identities = 546/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106028 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106083 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106084 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106141 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106142 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106195 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106196 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106255 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106256 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106315 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106316 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106375 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106376 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106435 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106436 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 106495 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106555 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106556 tcaccagctaaggcccctaaatgaccgctcagtgataa 106593
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 868 bits (438), Expect = 0.0 Identities = 487/502 (97%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 622 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 675 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 676 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 795 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 855 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 856 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 915 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 916 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 975 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1035 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1036 ctaaatgaccgctcagtgataa 1057
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 138883 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 138830 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138829 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138770 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138769 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 138710 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138709 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 138650 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 138649 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 138590 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 138589 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 138530 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138529 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138470 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 138469 ctaaatgaccgctcagtgataa 138448 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110214 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110267 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110268 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110327 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110328 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110387 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110388 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 110447 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110448 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110507 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 110508 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 110567 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110568 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110627 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 110628 ctaaatgaccgctcagtgataa 110649
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132154 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132101 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132100 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132041 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132040 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 131981 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131980 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 131921 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 131920 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 131861 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131860 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131801 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131800 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131741 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||| ||||||||||||| Sbjct: 131740 ctaaatgatcgctcagtgataa 131719 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104724 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104777 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104778 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104837 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104838 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 104897 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104898 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104957 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104958 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105017 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105018 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105077 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105137 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||| ||||||||||||| Sbjct: 105138 ctaaatgatcgctcagtgataa 105159
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135809 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135754 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135753 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135696 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135695 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135642 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135641 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 135582 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135581 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 135522 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135521 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135462 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 135461 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 135402 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135401 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 135342 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135341 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 135282 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 135281 tcaccagctaaggcccctaaatgatcgctcagtgataa 135244 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106821 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106876 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106877 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106934 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106935 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106988 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106989 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 107048 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107049 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 107108 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107109 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 107168 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107169 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107228 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107229 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 107288 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107289 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 107348 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 107349 tcaccagctaaggcccctaaatgatcgctcagtgataa 107386
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 2015 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 2070 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 2128 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 2129 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 2182 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 2242 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2243 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 2302 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2303 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 2362 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 2363 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 2422 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2423 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 2482 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2483 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 2542 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 2543 tcaccagctaaggcccctaaatgatcgctcagtgataa 2580
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135807 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135752 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135751 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135694 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135693 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135640 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135639 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 135580 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135579 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 135520 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135519 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135460 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 135459 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 135400 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135399 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 135340 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135339 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 135280 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 135279 tcaccagctaaggcccctaaatgatcgctcagtgataa 135242 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106819 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106874 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106875 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106932 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106933 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106986 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106987 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 107046 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107047 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 107106 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107107 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 107166 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107167 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107226 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107227 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 107286 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107287 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 107346 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 107347 tcaccagctaaggcccctaaatgatcgctcagtgataa 107384
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132147 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132094 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132093 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132034 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132033 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 131974 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131973 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 131914 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 131913 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 131854 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131853 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131794 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131793 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131734 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||| ||||||||||||| Sbjct: 131733 ctaaatgatcgctcagtgataa 131712 Score = 860 bits (434), Expect = 0.0 Identities = 486/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104722 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104775 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104776 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104835 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104836 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 104895 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104896 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104955 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104956 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105015 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105016 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105075 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105076 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105135 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||| ||||||||||||| Sbjct: 105136 ctaaatgatcgctcagtgataa 105157
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135538 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135483 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135425 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 135424 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 135371 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135370 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 135311 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135310 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 135251 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135250 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135191 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 135190 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 135131 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135130 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 135071 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135070 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 135011 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 135010 tcaccagctaaggcccctaaatgatcgctcagtgataa 134973 Score = 860 bits (434), Expect = 0.0 Identities = 545/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 106600 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106655 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106713 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106714 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106767 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106768 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106827 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106828 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106887 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106888 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106947 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106948 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107007 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107008 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtc 107067 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107068 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 107127 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||| ||||||||||||| Sbjct: 107128 tcaccagctaaggcccctaaatgatcgctcagtgataa 107165
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 858 bits (433), Expect = 0.0 Identities = 545/578 (94%), Gaps = 11/578 (1%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| ||||| |||||||| Sbjct: 131301 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctctcaagcagt 131246 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131245 gggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 131187 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 131186 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 131133 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131132 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 131073 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131072 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 131013 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131012 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 130953 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 130952 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 130893 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 130892 agcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtc 130833 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130832 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 130773 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 130772 tcaccagctaaggcccctaaatgaccgctcagtgataa 130735 Score = 858 bits (433), Expect = 0.0 Identities = 545/578 (94%), Gaps = 11/578 (1%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| ||||| |||||||| Sbjct: 102144 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctctcaagcagt 102199 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102200 gggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 102258 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 102259 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 102312 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102313 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 102372 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102373 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 102432 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102433 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 102492 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 102493 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 102552 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102553 agcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtc 102612 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102613 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 102672 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 102673 tcaccagctaaggcccctaaatgaccgctcagtgataa 102710
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 856 bits (432), Expect = 0.0 Identities = 508/531 (95%), Gaps = 8/531 (1%) Strand = Plus / Minus Query: 51 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 110 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 142345 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 142288 Query: 111 ggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaa 170 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 142287 ggcgactcataggcagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaa 142234 Query: 171 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 230 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 142233 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 142174 Query: 231 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 290 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142173 gaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaat 142114 Query: 291 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142113 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctc 142054 Query: 351 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142053 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 141994 Query: 411 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 470 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141993 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 141934 Query: 471 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 530 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 141933 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagg 141874 Query: 531 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141873 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataa 141823 Score = 856 bits (432), Expect = 0.0 Identities = 508/531 (95%), Gaps = 8/531 (1%) Strand = Plus / Plus Query: 51 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 110 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 110983 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 111040 Query: 111 ggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaa 170 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 111041 ggcgactcataggcagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaa 111094 Query: 171 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 230 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111095 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 111154 Query: 231 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 290 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111155 gaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaat 111214 Query: 291 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111215 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctc 111274 Query: 351 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111275 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 111334 Query: 411 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 470 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111335 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 111394 Query: 471 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 530 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 111395 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagg 111454 Query: 531 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111455 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataa 111505
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 135280 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 135227 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135226 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135167 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135107 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135106 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135047 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135046 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134987 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 134986 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 134927 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134926 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134867 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 134866 ctaaatgaccgctcagtgataa 134845 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 106626 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 106679 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106680 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106739 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106740 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106799 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106800 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106859 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106860 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106919 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 106920 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 106979 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106980 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107039 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 107040 ctaaatgaccgctcagtgataa 107061
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 135559 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 135506 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135505 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135446 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135445 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135386 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135385 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135326 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135325 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135266 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 135265 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 135206 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135205 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135146 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 135145 ctaaatgaccgctcagtgataa 135124 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 106848 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 106901 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106902 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106961 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106962 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 107021 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107022 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 107081 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 107082 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107141 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 107142 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 107201 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107261 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 107262 ctaaatgaccgctcagtgataa 107283
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 139088 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 139035 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139034 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138975 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138974 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 138915 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138914 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 138855 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 138854 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 138795 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 138794 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 138735 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138734 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138675 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 138674 ctaaatgaccgctcagtgataa 138653 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110211 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110264 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110265 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110324 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110325 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110384 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110385 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 110444 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110445 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110504 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 110505 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 110564 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110565 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110624 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 110625 ctaaatgaccgctcagtgataa 110646
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 852 bits (430), Expect = 0.0 Identities = 544/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 135067 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 135012 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135011 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaatagg 134954 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 134953 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 134900 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134899 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134840 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134839 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134780 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134779 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134720 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134719 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134660 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 134659 agcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtc 134600 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134599 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 134540 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 134539 tcaccagctaaggcccctaaatgaccgctcagtgataa 134502 Score = 852 bits (430), Expect = 0.0 Identities = 544/578 (94%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 105995 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 106050 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106051 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaatagg 106108 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 106109 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 106162 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106163 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106222 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106282 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106283 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106342 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106343 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106402 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 106403 agcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtc 106462 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106463 aaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106522 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106523 tcaccagctaaggcccctaaatgaccgctcagtgataa 106560
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 852 bits (430), Expect = 0.0 Identities = 485/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 718 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 771 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 772 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 831 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 891 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 951 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 952 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 1011 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1012 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 1071 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1131 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||| ||||||||||||| Sbjct: 1132 ctaaatgatcgctcagtgataa 1153
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 844 bits (426), Expect = 0.0 Identities = 542/578 (93%), Gaps = 21/578 (3%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 134491 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 134436 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134435 gggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 134380 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 134379 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 134326 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134325 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 134266 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134265 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 134206 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134205 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 134146 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134145 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 134086 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct: 134085 agcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtc 134033 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134032 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 133973 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 133972 tcaccagctaaggcccctaaatgaccgctcagtgataa 133935 Score = 844 bits (426), Expect = 0.0 Identities = 542/578 (93%), Gaps = 21/578 (3%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| |||||||||| |||||||||||||| Sbjct: 105791 aaagaacccccatcggggagtgaaatag-aacatgaaaccgtg---agctcccaagcagt 105846 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105847 gggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 105902 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 105903 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 105956 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105957 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 106016 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106017 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 106076 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106077 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 106136 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 106137 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 106196 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct: 106197 agcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtc 106249 Query: 484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106250 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 106309 Query: 544 tcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 106310 tcaccagctaaggcccctaaatgaccgctcagtgataa 106347
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 837 bits (422), Expect = 0.0 Identities = 483/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 620 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 673 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 674 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 733 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 734 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 793 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 853 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 854 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 913 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 914 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 973 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1033 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1034 ctaaatgaccgctcagtgataa 1055
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 837 bits (422), Expect = 0.0 Identities = 483/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132377 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132324 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132323 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 132264 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132263 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 132204 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132203 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 132144 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 132143 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 132084 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 132083 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132024 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132023 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131964 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 131963 ctaaatgaccgctcagtgataa 131942 Score = 837 bits (422), Expect = 0.0 Identities = 483/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104387 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104440 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104441 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 104500 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104501 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 104560 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104561 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104620 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104621 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 104680 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 104681 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 104740 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104741 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104800 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 104801 ctaaatgaccgctcagtgataa 104822
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 837 bits (422), Expect = 0.0 Identities = 544/579 (93%), Gaps = 12/579 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 131378 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 131323 Query: 64 gggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 122 |||||| || | || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131322 gggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 131264 Query: 123 gcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaat 182 ||||||||||||||||| |||| ||||||| |||||||||||||||||||||| | Sbjct: 131263 gcagtggcttggttaag-----ggaaaccaccgg-agccgtagcgaaagcgagtcttcac 131210 Query: 183 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 242 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131209 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 131150 Query: 243 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 302 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131149 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 131090 Query: 303 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131089 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 131030 Query: 363 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 131029 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 130970 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 130969 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggt 130910 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130909 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 130850 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||| Sbjct: 130849 atcaccagctaaggcccctaaatgaccgctcagtgataa 130811 Score = 837 bits (422), Expect = 0.0 Identities = 544/579 (93%), Gaps = 12/579 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 104016 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 104071 Query: 64 gggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 122 |||||| || | || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104072 gggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 104130 Query: 123 gcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaat 182 ||||||||||||||||| |||| ||||||| |||||||||||||||||||||| | Sbjct: 104131 gcagtggcttggttaag-----ggaaaccaccgg-agccgtagcgaaagcgagtcttcac 104184 Query: 183 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 242 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104185 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 104244 Query: 243 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 302 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104245 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104304 Query: 303 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104364 Query: 363 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 104365 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 104424 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 104425 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggt 104484 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104485 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 104544 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||| Sbjct: 104545 atcaccagctaaggcccctaaatgaccgctcagtgataa 104583
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 837 bits (422), Expect = 0.0 Identities = 483/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 133338 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 133285 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133284 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 133225 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133224 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 133165 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133164 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 133105 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 133104 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 133045 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 133044 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132985 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132984 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 132925 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 132924 ctaaatgaccgctcagtgataa 132903 Score = 837 bits (422), Expect = 0.0 Identities = 483/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105311 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 105364 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105365 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 105424 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105425 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 105484 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105485 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 105544 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 105545 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105604 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105605 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 105664 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105665 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105724 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 105725 ctaaatgaccgctcagtgataa 105746
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 833 bits (420), Expect = 0.0 Identities = 543/579 (93%), Gaps = 14/579 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| ||||| |||||||| Sbjct: 987 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctctcaagcagt 1042 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 gggaggagacagg---ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 1099 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1100 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 1153 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 1213 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 cttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatgagtt 1273 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 1333 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 1334 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 1393 Query: 424 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 483 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1394 agcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtc 1453 Query: 484 aaggtcggccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagcccgg 542 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1454 aaggtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccgg 1513 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1514 atcaccagctaaggcccctaaatgaccgctcagtgataa 1552
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 829 bits (418), Expect = 0.0 Identities = 482/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 627 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 680 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 681 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 800 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 860 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 861 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 920 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 921 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 980 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 981 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1040 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1041 ctaaatgaccgctcagtgataa 1062
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 829 bits (418), Expect = 0.0 Identities = 482/502 (96%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 629 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 682 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 683 ttatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaag 742 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 802 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 862 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 863 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 922 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 923 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 982 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 acaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042 Query: 560 ctaaatgaccgctcagtgataa 581 ||||||||||||||| |||||| Sbjct: 1043 ctaaatgaccgctcaatgataa 1064
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 825 bits (416), Expect = 0.0 Identities = 545/580 (93%), Gaps = 15/580 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 2259 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 2314 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2315 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 2372 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 2373 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 2426 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2427 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 2486 Query: 244 cttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagcggatgagt 302 ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2487 cttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagcggatgagt 2546 Query: 303 tgtggttaggggtgaaatg-ccactcgaacccagagctagctggttctccccgaaatgcg 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2547 tgtggttaggggtgaaatggccactcgaacccagagctagctggttctccccgaaatgcg 2606 Query: 362 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2607 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcg 2666 Query: 422 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 481 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 2667 agagcggtaccaaatcgaggcaaactctgaatactagatatgactc-aaaataacagggg 2725 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2726 tcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtccg 2785 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2786 gatcaccagctaaggcccctaaatgaccgctcagtgataa 2825
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 813 bits (410), Expect = 0.0 Identities = 480/502 (95%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129909 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129855 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 129796 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129795 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 129736 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129735 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 129676 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 129675 ccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 129616 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 129615 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 129556 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 129555 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 129496 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 129495 ctaaatgaccgctcagtgataa 129474 Score = 813 bits (410), Expect = 0.0 Identities = 480/502 (95%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102547 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102601 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102660 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102661 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 102720 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102721 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 102780 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 102781 ccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 102840 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 102841 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 102900 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 102901 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 102960 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 102961 ctaaatgaccgctcagtgataa 102982 Score = 42.1 bits (21), Expect = 2.0 Identities = 56/66 (84%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 130045 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 129990 Query: 64 gggagg 69 |||||| Sbjct: 129989 gggagg 129984 Score = 42.1 bits (21), Expect = 2.0 Identities = 56/66 (84%), Gaps = 4/66 (6%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 102411 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 102466 Query: 64 gggagg 69 |||||| Sbjct: 102467 gggagg 102472
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 807 bits (407), Expect = 0.0 Identities = 479/502 (95%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataa 1076 Score = 42.1 bits (21), Expect = 2.0 Identities = 56/66 (84%), Gaps = 4/66 (6%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 498 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 553 Query: 64 gggagg 69 |||||| Sbjct: 554 gggagg 559
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 795 bits (401), Expect = 0.0 Identities = 479/502 (95%), Gaps = 6/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 || ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 gg----gaacccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1054 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataa 1076 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggagg 69 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 793 bits (400), Expect = 0.0 Identities = 477/502 (95%), Gaps = 13/502 (2%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 160 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 219 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 279 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 280 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 339 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 340 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 399 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 400 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 452 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 512 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 513 ctaaatgaccgctcagtgataa 534
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 793 bits (400), Expect = 0.0 Identities = 477/502 (95%), Gaps = 13/502 (2%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 139739 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 139686 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139685 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 139626 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139625 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 139566 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139565 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 139506 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 139505 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 139446 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 139445 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 139393 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139392 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 139333 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 139332 ctaaatgaccgctcagtgataa 139311 Score = 793 bits (400), Expect = 0.0 Identities = 477/502 (95%), Gaps = 13/502 (2%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110321 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110374 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110375 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110434 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110435 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110494 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110495 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 110554 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110555 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110614 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 110615 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 110667 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110668 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110727 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 110728 ctaaatgaccgctcagtgataa 110749
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 791 bits (399), Expect = 0.0 Identities = 538/579 (92%), Gaps = 13/579 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| |||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 52195 aaagaacccccattggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 52140 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52139 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 52082 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||| ||||||||||||||||| ||||||| |||| |||||||||||||| || ||| Sbjct: 52081 cagcggcttggttaagggaac-----ccaccgg-agccatagcgaaagcgagtattcata 52028 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52027 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 51968 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 51967 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 51908 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51907 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 51848 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | | Sbjct: 51847 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgag 51788 Query: 424 agcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggt 482 |||||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| Sbjct: 51787 agcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggt 51728 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51727 aaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 51668 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 51667 atcaccagctaaggcccctaattgatcgctcagtgataa 51629 Score = 791 bits (399), Expect = 0.0 Identities = 538/579 (92%), Gaps = 13/579 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| |||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 37633 aaagaacccccattggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 37688 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37689 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 37746 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||| ||||||||||||||||| ||||||| |||| |||||||||||||| || ||| Sbjct: 37747 cagcggcttggttaagggaac-----ccaccgg-agccatagcgaaagcgagtattcata 37800 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37801 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 37860 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37861 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 37920 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37921 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 37980 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | | Sbjct: 37981 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgag 38040 Query: 424 agcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggt 482 |||||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| Sbjct: 38041 agcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggt 38100 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38101 aaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 38160 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 38161 atcaccagctaaggcccctaattgatcgctcagtgataa 38199
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 791 bits (399), Expect = 0.0 Identities = 538/579 (92%), Gaps = 13/579 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| |||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 4561 aaagaacccccattggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 4616 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4617 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 4674 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||| ||||||||||||||||| ||||||| |||| |||||||||||||| || ||| Sbjct: 4675 cagcggcttggttaagggaac-----ccaccgg-agccatagcgaaagcgagtattcata 4728 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4729 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 4788 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4789 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 4848 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4849 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 4908 Query: 364 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | | Sbjct: 4909 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgag 4968 Query: 424 agcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggt 482 |||||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| Sbjct: 4969 agcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggt 5028 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5029 aaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 5088 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 5089 atcaccagctaaggcccctaattgatcgctcagtgataa 5127
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 785 bits (396), Expect = 0.0 Identities = 476/502 (94%), Gaps = 13/502 (2%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 122 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 176 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 235 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 295 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 296 tgccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 355 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 356 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 415 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 416 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 468 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 528 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 529 ctaaatgaccgctcagtgataa 550
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 783 bits (395), Expect = 0.0 Identities = 479/503 (95%), Gaps = 8/503 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177465 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177519 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 177578 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 177579 tggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaa 177637 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177638 tgccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 177697 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 177698 ctggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcga 177757 Query: 440 ggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtga 498 ||||||||||||||||||||||||||| ||||||| | |||| |||||||||| ||||| Sbjct: 177758 ggcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtga 177817 Query: 499 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 558 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177818 gacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcc 177877 Query: 559 cctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||| Sbjct: 177878 cctaaatgaccgctcagtgataa 177900 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 aggcccctaaatgaccgctcag 575 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 781 bits (394), Expect = 0.0 Identities = 477/502 (95%), Gaps = 7/502 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||| ||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaacgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 693 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 694 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 753 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 813 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 873 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 874 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 933 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 934 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 993 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 994 accatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1053 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1054 ctaaatgaccgctcagtgataa 1075 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggagg 69 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 777 bits (392), Expect = 0.0 Identities = 450/468 (96%), Gaps = 6/468 (1%) Strand = Plus / Plus Query: 114 gactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcg 173 ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcg 645 Query: 174 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 233 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgac 705 Query: 234 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 293 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 706 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 765 Query: 294 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 825 Query: 354 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 885 Query: 414 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 473 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 886 gggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaat 945 Query: 474 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 533 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 1005 Query: 534 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 1053 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggagg 69 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 767 bits (387), Expect = 0.0 Identities = 476/503 (94%), Gaps = 7/503 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 620 ggaac-----ccaccgg-agccatagcgaaagcgagtattcataggactattgtcactgc 673 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 674 ttatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaag 733 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 793 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 853 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 854 ctggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcga 913 Query: 440 ggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtga 498 |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| Sbjct: 914 agcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtga 973 Query: 499 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 558 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 974 gacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcc 1033 Query: 559 cctaaatgaccgctcagtgataa 581 ||||| ||| ||||||||||||| Sbjct: 1034 cctaattgatcgctcagtgataa 1056
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 763 bits (385), Expect = 0.0 Identities = 425/437 (97%), Gaps = 1/437 (0%) Strand = Plus / Plus Query: 145 ggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 204 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 602 ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 660 Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 661 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 720 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 780 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 840 Query: 385 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 444 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 841 catctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaa 900 Query: 445 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 504 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 901 actctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgat 960 Query: 505 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 1020 Query: 565 tgaccgctcagtgataa 581 ||||||| ||||||||| Sbjct: 1021 tgaccgcccagtgataa 1037
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 759 bits (383), Expect = 0.0 Identities = 473/502 (94%), Gaps = 12/502 (2%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 641 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 875 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcga 934 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| | |||||||| ||||||||||| |||| Sbjct: 935 ggcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgag 988 Query: 500 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 559 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 989 acgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggccc 1048 Query: 560 ctaaatgaccgctcagtgataa 581 |||||||||||||||||||||| Sbjct: 1049 ctaaatgaccgctcagtgataa 1070 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggagg 69 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 759 bits (383), Expect = 0.0 Identities = 532/576 (92%), Gaps = 12/576 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 491 aaagaacccccataggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 546 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 547 gggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 607 tagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccta 660 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 gggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggatgaag 720 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 721 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 780 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 840 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 841 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 900 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg- 481 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 901 gagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataacagggga 960 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 | |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 961 taaaggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagccca 1020 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||||||| Sbjct: 1021 gatcaccagctaaggcccctaaatgaccgctcagtg 1056
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 741 bits (374), Expect = 0.0 Identities = 531/577 (92%), Gaps = 15/577 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 86754 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 86809 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86810 gggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 86869 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| || Sbjct: 86870 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgagagcgagtcttcatg 86923 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86924 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 86983 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 86984 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 87043 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87044 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 87103 Query: 364 gaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 87104 gaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccgcga 87163 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 |||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||| Sbjct: 87164 gagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaaggggt 87219 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 | |||| |||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 87220 aagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccag 87279 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgat 579 ||||||||||||||||||||||||||||||||||||| Sbjct: 87280 atcaccagctaaggcccctaaatgaccgctcagtgat 87316
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 733 bits (370), Expect = 0.0 Identities = 422/438 (96%), Gaps = 6/438 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46878 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46932 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 46991 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46992 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 47051 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47052 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 47111 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 47112 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 47171 Query: 440 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 499 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 47172 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 47231 Query: 500 acgatgggggataagctt 517 |||||||||||||||||| Sbjct: 47232 acgatgggggataagctt 47249
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 731 bits (369), Expect = 0.0 Identities = 497/534 (93%), Gaps = 13/534 (2%) Strand = Plus / Minus Query: 51 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 110 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 146025 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 145966 Query: 111 ggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaa 170 ||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||| Sbjct: 145965 ggcgacttataggcagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaa 145912 Query: 171 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 230 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 145911 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 145852 Query: 231 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 290 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 145851 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 145792 Query: 291 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 350 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145791 cagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctc 145732 Query: 351 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 409 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145731 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 145672 Query: 410 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccc 467 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 145671 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcc 145612 Query: 468 aa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 523 || ||| |||||| ||| |||||| |||||||||||| |||||||||||||||||||| Sbjct: 145611 aaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgt 145552 Query: 524 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145551 cgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 145498 Score = 731 bits (369), Expect = 0.0 Identities = 497/534 (93%), Gaps = 13/534 (2%) Strand = Plus / Plus Query: 51 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 110 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 112437 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 112496 Query: 111 ggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaa 170 ||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||| Sbjct: 112497 ggcgacttataggcagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaa 112550 Query: 171 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 230 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112551 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 112610 Query: 231 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 290 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 112611 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 112670 Query: 291 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 350 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112671 cagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctc 112730 Query: 351 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 409 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112731 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 112790 Query: 410 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccc 467 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 112791 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcc 112850 Query: 468 aa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 523 || ||| |||||| ||| |||||| |||||||||||| |||||||||||||||||||| Sbjct: 112851 aaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgt 112910 Query: 524 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112911 cgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 112964
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 729 bits (368), Expect = 0.0 Identities = 433/452 (95%), Gaps = 7/452 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 140 ggaacggaacccaccggnagccgtagcgaaag-cgagtcttaatagggcgattgtcactg 198 ||||| ||||||| |||||||||||||| |||||||| ||||||| |||||||||| Sbjct: 364803 ggaac-----ccaccgg-agccgtagcgaaaggcgagtcttcatagggcaattgtcactg 364856 Query: 199 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 258 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 364857 cttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaa 364916 Query: 259 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 318 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 364917 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 364976 Query: 319 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364977 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 365036 Query: 379 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 438 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 365037 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 365096 Query: 439 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 498 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 365097 aggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtga 365156 Query: 499 gacgatgggggataagcttcatcgtcgagagg 530 |||| ||||||||||||||||||||||||||| Sbjct: 365157 gacggtgggggataagcttcatcgtcgagagg 365188 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 525 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataa 129291 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 728 bits (367), Expect = 0.0 Identities = 528/576 (91%), Gaps = 12/576 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 117658 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 117603 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117602 gggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 117543 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 117542 tagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccta 117489 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117488 gggcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaag 117429 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 117428 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 117369 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117368 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 117309 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117308 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 117249 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-gggg 481 |||||||||||||||||||||||||||||||||||||||||| || |||||| | |||| Sbjct: 117248 gagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataataggggg 117189 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 | | |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 117188 taatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagccca 117129 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||||||||| |||| Sbjct: 117128 gatcaccagctaaggcccctaaatgaccgctaagtg 117093 Score = 728 bits (367), Expect = 0.0 Identities = 528/576 (91%), Gaps = 12/576 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 90444 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 90499 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90500 gggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 90559 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 90560 tagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccta 90613 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 90614 gggcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaag 90673 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 90674 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 90733 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90734 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 90793 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 90794 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 90853 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-gggg 481 |||||||||||||||||||||||||||||||||||||||||| || |||||| | |||| Sbjct: 90854 gagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataataggggg 90913 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 | | |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 90914 taatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagccca 90973 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||||||||| |||| Sbjct: 90974 gatcaccagctaaggcccctaaatgaccgctaagtg 91009
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 720 bits (363), Expect = 0.0 Identities = 527/576 (91%), Gaps = 12/576 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 491 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 546 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 547 gggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||| |||||||||| || ||||||| |||||||||||||||||||||| | Sbjct: 607 tagtggcctggttaaggggac-----ccaccgg-agccgtagcgaaagcgagtcttcctg 660 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 gggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggatgaag 720 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 || || |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 721 ctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 780 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 840 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 841 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 900 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg- 481 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||| Sbjct: 901 gagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacggggga 960 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 | | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 961 taagggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagccca 1020 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||||||| Sbjct: 1021 gatcaccagctaaggcccctaaatgaccgctcagtg 1056
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 716 bits (361), Expect = 0.0 Identities = 528/577 (91%), Gaps = 14/577 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 88840 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 88895 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88896 gggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 88955 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| || Sbjct: 88956 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgagagcgagtcttcatg 89009 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89010 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 89069 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 89070 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 89129 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89130 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 89189 Query: 364 gaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 89190 gaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccacga 89249 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 |||||||||||||||||||||||||||||||||||||| | ||||| | || ||||| Sbjct: 89250 gagcggtaccaaatcgaggcaaactctgaatactagat-taccccaata--aaagggggt 89306 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 | |||| |||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 89307 aagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccag 89366 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtgat 579 ||||||||||||||||||||||||||||||||||||| Sbjct: 89367 atcaccagctaaggcccctaaatgaccgctcagtgat 89403
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 704 bits (355), Expect = 0.0 Identities = 442/466 (94%), Gaps = 9/466 (1%) Strand = Plus / Plus Query: 120 taggcagtggcttggttaa-gggaacggaacccaccggnagccgtagcgaaagcgagtct 178 ||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaa-ccgtagcgaaagcgagtct 667 Query: 179 taatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccag 236 | ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 668 tcatagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccag 727 Query: 237 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 296 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 728 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 787 Query: 297 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-ga 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 788 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccga 847 Query: 356 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 907 Query: 416 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 475 || ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 908 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataa 967 Query: 476 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 535 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 caagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaac 1027 Query: 536 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 1028 agccctgatcacccgctaaggcccctaaatgatcgctcagtgataa 1073
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 694 bits (350), Expect = 0.0 Identities = 522/575 (90%), Gaps = 11/575 (1%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 127950 aaagaacccccataggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 127895 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 127894 gggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcatagg 127835 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 127834 cagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccta 127781 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 127780 gggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatgaag 127721 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127720 cttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 127661 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127660 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 127601 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct: 127600 gaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcga 127541 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 ||||||||||||||||||||||||||||||||||| |||||||| || ||| ||| Sbjct: 127540 aagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaa 127481 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 | |||| ||||||||||||||||||||||||||||| |||||||||| |||||||| | Sbjct: 127480 aagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccag 127421 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||| |||||||| Sbjct: 127420 atcaccagctaaggcccctaaatgactgctcagtg 127386 Score = 694 bits (350), Expect = 0.0 Identities = 522/575 (90%), Gaps = 11/575 (1%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 95497 aaagaacccccataggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 95552 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 95553 gggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcatagg 95612 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 95613 cagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccta 95666 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 95667 gggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatgaag 95726 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95727 cttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 95786 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95787 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 95846 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct: 95847 gaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcga 95906 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 482 ||||||||||||||||||||||||||||||||||| |||||||| || ||| ||| Sbjct: 95907 aagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaa 95966 Query: 483 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 542 | |||| ||||||||||||||||||||||||||||| |||||||||| |||||||| | Sbjct: 95967 aagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccag 96026 Query: 543 atcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||| |||||||| Sbjct: 96027 atcaccagctaaggcccctaaatgactgctcagtg 96061
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 680 bits (343), Expect = 0.0 Identities = 522/576 (90%), Gaps = 12/576 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 495 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 550 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 gggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 610 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 611 cagtggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcaagtcttcctg 664 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 724 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 725 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 784 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 844 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 845 gaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcga 904 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag-ggg 481 |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || | | Sbjct: 905 gagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataatagagag 964 Query: 482 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 541 | | |||| |||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 965 taagggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacagccca 1024 Query: 542 gatcaccagctaaggcccctaaatgaccgctcagtg 577 ||||||| ||||||||||||||||||||||| |||| Sbjct: 1025 gatcaccggctaaggcccctaaatgaccgctaagtg 1060
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 617 bits (311), Expect = e-173 Identities = 423/456 (92%), Gaps = 11/456 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 115720 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 115665 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115664 gggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 115605 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| ||||||||||| | ||||||| |||||||||||||||||||||| || Sbjct: 115604 cagtggcctggttaagggagc-----ccaccgg-agccgtagcgaaagcgagtcttctta 115551 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115550 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 115491 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 115490 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 115431 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115430 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 115371 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115370 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 115311 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactag 458 |||||||||||||||||||||||||||||||||||| Sbjct: 115310 gagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 617 bits (311), Expect = e-173 Identities = 423/456 (92%), Gaps = 11/456 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 86400 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 86455 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86456 gggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 86515 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| ||||||||||| | ||||||| |||||||||||||||||||||| || Sbjct: 86516 cagtggcctggttaagggagc-----ccaccgg-agccgtagcgaaagcgagtcttctta 86569 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86570 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 86629 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 86630 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 86689 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86690 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 86749 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86750 gaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcga 86809 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactag 458 |||||||||||||||||||||||||||||||||||| Sbjct: 86810 gagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtg 115155 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtg 86965
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 609 bits (307), Expect = e-171 Identities = 365/383 (95%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 4851 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 4904 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4905 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 4964 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 4965 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5024 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5025 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5084 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5085 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5144 Query: 440 ggcaaactctgaatactagatat 462 ||||||||||||||||||||||| Sbjct: 5145 ggcaaactctgaatactagatat 5167 Score = 172 bits (87), Expect = 8e-40 Identities = 93/95 (97%) Strand = Plus / Plus Query: 487 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 547 ccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| ||||||||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataa 5276
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 609 bits (307), Expect = e-171 Identities = 365/383 (95%), Gaps = 6/383 (1%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 23074 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 23021 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23020 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 22961 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 22960 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 22901 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22900 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 22841 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 22840 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 22781 Query: 440 ggcaaactctgaatactagatat 462 ||||||||||||||||||||||| Sbjct: 22780 ggcaaactctgaatactagatat 22758 Score = 172 bits (87), Expect = 8e-40 Identities = 93/95 (97%) Strand = Plus / Minus Query: 487 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 547 ccagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| ||||||||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataa 22649
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 603 bits (304), Expect = e-169 Identities = 368/388 (94%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5119 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 5233 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5292 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 tgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5352 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5353 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5412 Query: 440 ggcaaactctgaatactagatatgaccc 467 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440 Score = 174 bits (88), Expect = 2e-40 Identities = 101/104 (97%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 479 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 537 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 538 cccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataa 5548
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 603 bits (304), Expect = e-169 Identities = 368/388 (94%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5119 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 5233 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5292 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 tgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5352 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5353 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5412 Query: 440 ggcaaactctgaatactagatatgaccc 467 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440 Score = 174 bits (88), Expect = 2e-40 Identities = 101/104 (97%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 479 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 537 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 538 cccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataa 5548
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 601 bits (303), Expect = e-168 Identities = 389/415 (93%), Gaps = 7/415 (1%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 109 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 4422 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 4481 Query: 110 cggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaa 169 |||||||| |||||||||||| |||||||||||| |||||| |||||||||||| Sbjct: 4482 cggcgacttataggcagtggcctggttaagggaatt-----caccgg-agccgtagcgaa 4535 Query: 170 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 229 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4536 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 4595 Query: 230 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 289 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 4596 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 4655 Query: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4656 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 4715 Query: 350 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4716 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 4775 Query: 409 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4776 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtg 4949
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 601 bits (303), Expect = e-168 Identities = 389/415 (93%), Gaps = 7/415 (1%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 109 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 532 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 591 Query: 110 cggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaa 169 |||||||| |||||||||||| |||||||||||| |||||| |||||||||||| Sbjct: 592 cggcgacttataggcagtggcctggttaagggaatt-----caccgg-agccgtagcgaa 645 Query: 170 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 229 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 705 Query: 230 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 289 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 706 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 765 Query: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 825 Query: 350 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 826 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 885 Query: 409 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 886 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 601 bits (303), Expect = e-168 Identities = 389/415 (93%), Gaps = 7/415 (1%) Strand = Plus / Minus Query: 50 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 109 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 150713 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 150654 Query: 110 cggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaa 169 |||||||| |||||||||||| |||||||||||| |||||| |||||||||||| Sbjct: 150653 cggcgacttataggcagtggcctggttaagggaatt-----caccgg-agccgtagcgaa 150600 Query: 170 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 229 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150599 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 150540 Query: 230 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 289 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 150539 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 150480 Query: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150479 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 150420 Query: 350 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 150419 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 150360 Query: 409 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150359 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 601 bits (303), Expect = e-168 Identities = 389/415 (93%), Gaps = 7/415 (1%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 109 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 117953 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 118012 Query: 110 cggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaa 169 |||||||| |||||||||||| |||||||||||| |||||| |||||||||||| Sbjct: 118013 cggcgacttataggcagtggcctggttaagggaatt-----caccgg-agccgtagcgaa 118066 Query: 170 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 229 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118067 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 118126 Query: 230 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 289 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 118127 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 118186 Query: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118187 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 118246 Query: 350 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 118247 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 118306 Query: 409 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118307 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtg 150186 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtg 118480
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 601 bits (303), Expect = e-168 Identities = 389/415 (93%), Gaps = 7/415 (1%) Strand = Plus / Plus Query: 50 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 109 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 532 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 591 Query: 110 cggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaa 169 |||||||| |||||||||||| |||||||||||| |||||| |||||||||||| Sbjct: 592 cggcgacttataggcagtggcctggttaagggaatt-----caccgg-agccgtagcgaa 645 Query: 170 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 229 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 705 Query: 230 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 289 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 706 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 765 Query: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 825 Query: 350 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 826 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 885 Query: 409 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 886 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 595 bits (300), Expect = e-167 Identities = 343/356 (96%), Gaps = 10/356 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 75205 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctccc------- 75154 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 -ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 75095 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 75094 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 75036 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75035 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 74976 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74975 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 74916 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74915 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 595 bits (300), Expect = e-167 Identities = 343/356 (96%), Gaps = 10/356 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 382333 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctccc------- 382384 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 -ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 382443 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 382444 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 382502 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382503 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 382562 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382563 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 382622 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382623 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 595 bits (300), Expect = e-167 Identities = 343/356 (96%), Gaps = 10/356 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113296 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctccc------- 113245 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 -ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 113186 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 113185 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 113127 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113126 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 113067 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113066 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 113007 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113006 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 595 bits (300), Expect = e-167 Identities = 346/360 (96%), Gaps = 10/360 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 367978 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctccc------- 367927 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 -ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 367868 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 367867 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 367809 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367808 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 367749 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367748 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 367689 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367688 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 595 bits (300), Expect = e-167 Identities = 346/360 (96%), Gaps = 10/360 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 184583 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctccc------- 184532 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 -ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 184473 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 184472 cagtggcttggttaagggaatggaacccaccgg-agccgtagcgaaagcgagtcttcata 184414 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184413 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 184354 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184353 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 184294 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184293 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 gtcgagagggaaacagcccggatc 545 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 593 bits (299), Expect = e-166 Identities = 423/459 (92%), Gaps = 8/459 (1%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||| ||||||||| Sbjct: 474 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agcttccaagcagt 529 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 530 gggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 589 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||| |||||||||||| | | ||||||| |||| ||||||||||||||||| | Sbjct: 590 cagtggcctggttaagggaaagaa--ccaccgg-agccatagcgaaagcgagtcttccca 646 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 706 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 707 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 766 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 826 Query: 364 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 827 gaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccgcga 886 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagata 461 |||||||||||||||||||||||||||||||||| |||| Sbjct: 887 gagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||| |||| Sbjct: 1015 taaggcccctaaatgaccgctaagtg 1040
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 575 bits (290), Expect = e-161 Identities = 336/350 (96%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 150 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 203 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 204 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 263 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 323 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 324 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 383 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 429 |||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 384 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 573 bits (289), Expect = e-160 Identities = 509/577 (88%), Gaps = 13/577 (2%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| ||||||| |||||| Sbjct: 138777 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccgagcagt 138722 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138721 gggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 138662 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 | | ||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 138661 cggcggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccca 138608 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138607 gggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatgaag 138548 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 138547 cttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtc 138488 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138487 gtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgtt 138428 Query: 364 gaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||| ||||||| || | || | |||||||||||||| |||||||||||||| Sbjct: 138427 gaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcga 138368 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca--ggg 480 |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| || Sbjct: 138367 gagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagg 138308 Query: 481 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 540 || ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| Sbjct: 138307 gtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagccc 138248 Query: 541 ggatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||| ||||||||||||||| Sbjct: 138247 agatcaccagctaaggcccctgaatgaccgctcagtg 138211 Score = 573 bits (289), Expect = e-160 Identities = 509/577 (88%), Gaps = 13/577 (2%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| ||||||| |||||| Sbjct: 83100 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccgagcagt 83155 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 83156 gggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 83215 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 | | ||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 83216 cggcggcctggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttccca 83269 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83270 gggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatgaag 83329 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 83330 cttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtc 83389 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83390 gtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgtt 83449 Query: 364 gaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgc 422 |||||||||| ||||||| || | || | |||||||||||||| |||||||||||||| Sbjct: 83450 gaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcga 83509 Query: 423 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca--ggg 480 |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| || Sbjct: 83510 gagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagg 83569 Query: 481 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 540 || ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| Sbjct: 83570 gtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagccc 83629 Query: 541 ggatcaccagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||| ||||||||||||||| Sbjct: 83630 agatcaccagctaaggcccctgaatgaccgctcagtg 83666
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 555 bits (280), Expect = e-155 Identities = 452/504 (89%), Gaps = 9/504 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 || ||||| ||||| || | |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 626 gg----gaacc-accgg-agtcatagcgaaagcaagtcttcatagggcaaatgtcattgc 679 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 680 ttatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaag 739 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 799 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| | Sbjct: 800 tgccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-a 858 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 | ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 859 ccagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattga 918 Query: 440 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 497 |||||||| ||||||||||||||||| ||||||||||||||| | ||||| | |||||| Sbjct: 919 ggcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtg 978 Query: 498 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 557 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 979 agaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggc 1038 Query: 558 ccctaaatgaccgctcagtgataa 581 ||||||||||||||| ||| |||| Sbjct: 1039 ccctaaatgaccgctaagttataa 1062
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 555 bits (280), Expect = e-155 Identities = 323/336 (96%), Gaps = 6/336 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 146 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 199 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 259 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 320 tgccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttga 379 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgg 415 |||||||||||||||||||||||||||||||||||| Sbjct: 380 ctggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 541 bits (273), Expect = e-151 Identities = 382/413 (92%), Gaps = 4/413 (0%) Strand = Plus / Plus Query: 49 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 108 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 144451 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 144510 Query: 109 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcga 168 ||||||||| ||||| ||||| ||||||||| | ||||| |||| ||||||||||| Sbjct: 144511 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgg-agccgtagcga 144567 Query: 169 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 228 ||||||||||| | |||| |||||||| |||||| ||||||||||||||||||||||| Sbjct: 144568 aagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcc 144627 Query: 229 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 288 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 144628 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 144687 Query: 289 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144688 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 144747 Query: 349 tccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgttt 407 ||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| Sbjct: 144748 tccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttc 144807 Query: 408 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 460 |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144808 cggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 541 bits (273), Expect = e-151 Identities = 382/413 (92%), Gaps = 4/413 (0%) Strand = Plus / Minus Query: 49 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 108 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 88400 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 88341 Query: 109 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcga 168 ||||||||| ||||| ||||| ||||||||| | ||||| |||| ||||||||||| Sbjct: 88340 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgg-agccgtagcga 88284 Query: 169 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 228 ||||||||||| | |||| |||||||| |||||| ||||||||||||||||||||||| Sbjct: 88283 aagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcc 88224 Query: 229 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 288 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 88223 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 88164 Query: 289 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88163 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 88104 Query: 349 tccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgttt 407 ||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| Sbjct: 88103 tccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttc 88044 Query: 408 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 460 |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88043 cggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 552 taaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtg 144984 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 552 taaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtg 87867
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 521 bits (263), Expect = e-145 Identities = 378/411 (91%), Gaps = 9/411 (2%) Strand = Plus / Minus Query: 55 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 114 ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||| Sbjct: 6010 ccaagcagtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcg 5951 Query: 115 actcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcga 174 ||| ||||||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 5950 acttataggcagtggcttggttaagggcac-----ccaccgg-agccgtagcgagagcga 5897 Query: 175 gtcttaatagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgac 233 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5896 gtcttcatagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgac 5837 Query: 234 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 293 |||||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 5836 caggatgaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcag 5778 Query: 294 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5777 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 5718 Query: 354 gaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtg 412 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 5717 gaaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggta 5658 Query: 413 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 463 ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5657 taggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 131 bits (66), Expect = 3e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 546 accagctaaggcccctaaatgaccgctcagtgat 579 ||||| |||||||||||||||||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgat 5509
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 482 bits (243), Expect = e-133 Identities = 336/363 (92%), Gaps = 12/363 (3%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||| ||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 465 aaagaacccccatcggggagtgaaatag-aacatgaaaccgta---agctcccaagcagt 520 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 578 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 579 cagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcgagtcttcata 632 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 692 Query: 244 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 303 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 752 Query: 304 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 812 Query: 364 gag 366 ||| Sbjct: 813 gag 815
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 468 bits (236), Expect = e-128 Identities = 365/404 (90%), Gaps = 8/404 (1%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 540 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 599 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || |||||||||||| |||||||||||| |||||| |||||||||||||||||| Sbjct: 600 cttataggcagtggcgtggttaagggaatt-----caccgg-agccgtagcgaaagcgag 653 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 654 tct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 712 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||| Sbjct: 713 ggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 772 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||| Sbjct: 773 gatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccga 832 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 |||||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 833 aatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcg 892 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 893 ggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 551 ctaaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtg 1039
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 466 bits (235), Expect = e-128 Identities = 348/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 142 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 143 acggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 202 | |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 627 at-----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgttta 679 Query: 203 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 262 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 680 tggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgg 739 Query: 263 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 322 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 740 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 799 Query: 323 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 382 ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 800 cactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatg 859 Query: 383 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 441 | | || ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 860 ggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatg 919 Query: 442 caaactctgaatactagatatg 463 |||||||||||||||| ||||| Sbjct: 920 caaactctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 551 ctaaggcccctaaat 565 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 466 bits (235), Expect = e-128 Identities = 348/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 142 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 143 acggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 202 | |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 3661 at-----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgttta 3713 Query: 203 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 262 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 3714 tggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgg 3773 Query: 263 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 322 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3774 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 3833 Query: 323 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 382 ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 3834 cactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatg 3893 Query: 383 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 441 | | || ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 3894 ggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatg 3953 Query: 442 caaactctgaatactagatatg 463 |||||||||||||||| ||||| Sbjct: 3954 caaactctgaatactaaatatg 3975 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 551 ctaaggcccctaaat 565 |||||||||||||| Sbjct: 4045 ttaaggcccctaaat 4059
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 462 bits (233), Expect = e-127 Identities = 351/386 (90%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 || ||||| ||||| |||| |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 639 gg----gaacc-accgg-agccatagcgaaagcaagtcttcatagggcaaatgtcattgc 692 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 693 ttatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaag 752 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 812 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| | Sbjct: 813 tgccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-a 871 Query: 380 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 439 | ||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 872 ccggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattga 931 Query: 440 ggcaaactctgaatactagatatgac 465 |||||||| ||||||||||||||||| Sbjct: 932 ggcaaactatgaatactagatatgac 957 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 490 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 549 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 550 gctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||||| ||| |||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataa 1091
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 458 bits (231), Expect = e-125 Identities = 347/382 (90%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 142 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 143 acggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 202 | |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 627 at-----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgttta 679 Query: 203 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 262 |||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| | Sbjct: 680 tggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgg 739 Query: 263 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 322 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 740 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 799 Query: 323 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 382 ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 800 cactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatg 859 Query: 383 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 441 | | || ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 860 ggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatg 919 Query: 442 caaactctgaatactagatatg 463 |||||||||||||||| ||||| Sbjct: 920 caaactctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 551 ctaaggcccctaaat 565 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 452 bits (228), Expect = e-124 Identities = 363/404 (89%), Gaps = 8/404 (1%) Strand = Plus / Minus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124725 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 124666 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || |||||||||||| |||||||||||| |||||| |||||||||||||||||| Sbjct: 124665 cttataggcagtggcgtggttaagggaatt-----caccgg-agccgtagcgaaagcgag 124612 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 124611 tct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 124553 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 124552 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 124493 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||| Sbjct: 124492 gatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccga 124433 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 |||||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 124432 aatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcg 124373 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124372 ggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 452 bits (228), Expect = e-124 Identities = 363/404 (89%), Gaps = 8/404 (1%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95141 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 95200 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || |||||||||||| |||||||||||| |||||| |||||||||||||||||| Sbjct: 95201 cttataggcagtggcgtggttaagggaatt-----caccgg-agccgtagcgaaagcgag 95254 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 95255 tct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 95313 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 95314 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 95373 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||| Sbjct: 95374 gatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccga 95433 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 |||||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 95434 aatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcg 95493 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95494 ggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 551 ctaaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtg 124226 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 551 ctaaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtg 95640
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 444 bits (224), Expect = e-121 Identities = 318/348 (91%), Gaps = 1/348 (0%) Strand = Plus / Minus Query: 234 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 293 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 294 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 353 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 354 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 413 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 414 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 473 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 474 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 533 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 534 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 ||| || |||||||||||||||||||||||||||| |||||||||||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataa 2765 Score = 143 bits (72), Expect = 7e-31 Identities = 121/136 (88%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 |||||||||||| |||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3189 -----ggaacccaccgg-agccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Query: 200 ttatggacccgaacct 215 |||||||||||||||| Sbjct: 3135 ttatggacccgaacct 3120
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 432 bits (218), Expect = e-118 Identities = 359/402 (89%), Gaps = 3/402 (0%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 4584 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 4643 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 |||||||||||||||||||||||||||| | || ||||| |||| |||||||||| || Sbjct: 4644 ctcataggcagtggcttggttaagggaaattatcc-accgg-agccatagcgaaagcaag 4701 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||| Sbjct: 4702 tctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggcca 4761 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||| Sbjct: 4762 ggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcg 4821 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 4822 gatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccga 4881 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 ||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||| Sbjct: 4882 aatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcg 4941 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||| || || |||||||||||||||||||||||||||||| Sbjct: 4942 ggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 103 bits (52), Expect = 6e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 554 aggcccctaaatgaccgctcagtg 577 ||||||||||||| ||||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtg 5088
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 432 bits (218), Expect = e-118 Identities = 359/402 (89%), Gaps = 3/402 (0%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 |||||||||||||||||||||||||||| | || ||||| |||| |||||||||| || Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accgg-agccatagcgaaagcaag 668 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||| Sbjct: 669 tctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggcca 728 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||| Sbjct: 729 ggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcg 788 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 789 gatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccga 848 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 ||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||| Sbjct: 849 aatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcg 908 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||| || || |||||||||||||||||||||||||||||| Sbjct: 909 ggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 6e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 554 aggcccctaaatgaccgctcagtg 577 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 432 bits (218), Expect = e-118 Identities = 359/402 (89%), Gaps = 3/402 (0%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 |||||||||||||||||||||||||||| | || ||||| |||| |||||||||| || Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accgg-agccatagcgaaagcaag 668 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||| Sbjct: 669 tctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggcca 728 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||| Sbjct: 729 ggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcg 788 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 |||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 789 gatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccga 848 Query: 356 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 414 ||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||| Sbjct: 849 aatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcg 908 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||| || || |||||||||||||||||||||||||||||| Sbjct: 909 ggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 6e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 554 aggcccctaaatgaccgctcagtg 577 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 428 bits (216), Expect = e-117 Identities = 235/239 (98%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 392 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 450 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 510 Query: 124 cagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgagtcttaata 183 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 511 cagtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcata 569 Query: 184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 751 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 810 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 811 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 870 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 871 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 930 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 931 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 990 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 991 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1050 Query: 457 ag 458 || Sbjct: 1051 ag 1052 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtg 1154 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 55 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 114 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 654 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 713 Query: 115 actcataggcagtggcttggttaagg 140 ||| |||||||||||| ||||||||| Sbjct: 714 acttataggcagtggcctggttaagg 739
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 634 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 693 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 694 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 753 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 754 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 813 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 873 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 933 Query: 457 ag 458 || Sbjct: 934 ag 935 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtg 1037 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 55 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 114 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 537 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 596 Query: 115 actcataggcagtggcttggttaagg 140 ||| |||||||||||| ||||||||| Sbjct: 597 acttataggcagtggcctggttaagg 622
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 647 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 706 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 707 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 766 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 767 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 826 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 827 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 886 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 887 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 946 Query: 457 ag 458 || Sbjct: 947 ag 948 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 486 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 545 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 546 accagctaaggcccctaaatgaccgctcagtg 577 |||||||||||||||||||||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtg 1050 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 55 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 114 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 550 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 609 Query: 115 actcataggcagtggcttggttaagg 140 ||| |||||||||||| ||||||||| Sbjct: 610 acttataggcagtggcctggttaagg 635
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 406 bits (205), Expect = e-110 Identities = 360/406 (88%), Gaps = 8/406 (1%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 537 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 596 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || ||||||||||||| |||||| || || || ||||| |||| ||||||||||||| Sbjct: 597 cttataggcagtggctaggttaa-ggtacaaaa---accgg-agccatagcgaaagcgag 651 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| ||| Sbjct: 652 tcttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggcca 710 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||| Sbjct: 711 ggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcg 770 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 771 gatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccga 830 Query: 356 aatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgc 413 |||||||||||||||||| |||| | || ||||||||||||||||||||||||||| Sbjct: 831 aatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgc 890 Query: 414 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 891 gggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 406 bits (205), Expect = e-110 Identities = 360/406 (88%), Gaps = 8/406 (1%) Strand = Plus / Minus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 115125 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 115066 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || ||||||||||||| |||||| || || || ||||| |||| ||||||||||||| Sbjct: 115065 cttataggcagtggctaggttaa-ggtacaaaa---accgg-agccatagcgaaagcgag 115011 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| ||| Sbjct: 115010 tcttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggcca 114952 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||| Sbjct: 114951 ggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcg 114892 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 114891 gatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccga 114832 Query: 356 aatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgc 413 |||||||||||||||||| |||| | || ||||||||||||||||||||||||||| Sbjct: 114831 aatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgc 114772 Query: 414 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114771 gggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 406 bits (205), Expect = e-110 Identities = 360/406 (88%), Gaps = 8/406 (1%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 86863 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 86922 Query: 116 ctcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcgag 175 || ||||||||||||| |||||| || || || ||||| |||| ||||||||||||| Sbjct: 86923 cttataggcagtggctaggttaa-ggtacaaaa---accgg-agccatagcgaaagcgag 86977 Query: 176 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 235 |||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| ||| Sbjct: 86978 tcttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggcca 87036 Query: 236 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 295 ||||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||| Sbjct: 87037 ggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcg 87096 Query: 296 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 355 ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 87097 gatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccga 87156 Query: 356 aatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgc 413 |||||||||||||||||| |||| | || ||||||||||||||||||||||||||| Sbjct: 87157 aatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgc 87216 Query: 414 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87217 gggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 406 bits (205), Expect = e-110 Identities = 267/285 (93%), Gaps = 7/285 (2%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 138 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 139 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 198 | |||||||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 80 g-----ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 133 Query: 199 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 193 Query: 259 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 318 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 253 Query: 319 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 363 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 351 bits (177), Expect = 2e-93 Identities = 195/201 (97%) Strand = Plus / Plus Query: 381 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 440 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 441 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 500 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 501 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 561 taaatgaccgctcagtgataa 581 ||||||| ||||||||||||| Sbjct: 497 taaatgatcgctcagtgataa 517
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1011 ggcccctaaatgacc 1025 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 140 gg 141 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 381 bits (192), Expect = e-102 Identities = 331/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1011 ggcccctaaatgacc 1025 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 140 gg 141 || Sbjct: 601 gg 602
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 381 bits (192), Expect = e-102 Identities = 332/375 (88%), Gaps = 4/375 (1%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1011 ggcccctaaatgacc 1025 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 381 bits (192), Expect = e-102 Identities = 331/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 373 bits (188), Expect = e-100 Identities = 330/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 197 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 256 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 257 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 316 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 317 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 376 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg- 831 Query: 377 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | | ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 tatccagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 437 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 494 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 495 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 554 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 555 ggcccctaaatgacc 569 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 140 gg 141 || Sbjct: 602 gg 603
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 363 bits (183), Expect = 4e-97 Identities = 358/411 (87%), Gaps = 9/411 (2%) Strand = Plus / Plus Query: 55 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 114 ||||||||||||||| || || | |||||||| |||||| ||||||||||||| ||||| Sbjct: 531 ccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcg 588 Query: 115 actcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcga 174 ||||||| | |||||| |||||||||| ||||| ||||| |||| |||||||||| | Sbjct: 589 actcataagtagtggcctggttaaggg----gaacc-accgg-agccatagcgaaagcaa 642 Query: 175 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 234 ||||| |||||| | ||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 643 gtcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgatctaaccatgacc 702 Query: 235 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 294 |||||| | |||| | |||||||| | |||| |||||||||||||||||||||||||| Sbjct: 703 aggatgcaatttggttaaaactaagtgggggtctgaaccgactgatgttgaagaatcagc 762 Query: 295 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 354 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 763 ggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttcgccccg 822 Query: 355 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 414 |||||| || ||||||||||||| || || ||||||||||||||||| ||||| |||||| Sbjct: 823 aaatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggtgcg 881 Query: 415 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 465 || || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 882 ggtcacgagagcggtaccaaattgaggcagactatgaatactagatatgac 932 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 468 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 527 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 528 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 581 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataa 1057
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 361 bits (182), Expect = 2e-96 Identities = 337/382 (88%), Gaps = 10/382 (2%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 141 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaa-gg 687 Query: 142 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgc 199 | ||| | |||| |||| ||||||||| |||||||||||||||||| |||||| Sbjct: 688 a---gaatcatccgg-agccagagcgaaagcaagtcttaatagggcgattttgtcacttt 743 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 744 ttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 803 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 804 tggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 863 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 864 tgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 923 Query: 380 --ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 || | ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 924 tgttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 983 Query: 437 cgaggcaaactctgaatactag 458 || ||||||| ||||||||| Sbjct: 984 cgtagcaaactaagaatactag 1005 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 552 taaggcccctaaatgaccgctcagtg 577 |||||||||| |||| ||||| |||| Sbjct: 1083 taaggcccctgaatggccgctaagtg 1108
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 359 bits (181), Expect = 7e-96 Identities = 275/305 (90%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||| |||||| ||||| |||||||||| |||||||||||||| || Sbjct: 646 agccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccgg 705 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| Sbjct: 706 gtgatctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgacc 765 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 766 gatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggag 825 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| Sbjct: 826 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggta 885 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 886 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatact 945 Query: 457 agata 461 |||| Sbjct: 946 ggata 950 Score = 103 bits (52), Expect = 6e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 554 aggcccctaaatgaccgctcagtg 577 ||||||||||||| ||||| |||| Sbjct: 1027 aggcccctaaatggccgctaagtg 1050 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 546 caagcagtgggagaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcga 605 Query: 116 ctcataggcagtggcttggttaagggaa 143 ||||||| ||||||| ||||||||||| Sbjct: 606 ctcatagatagtggctgggttaagggaa 633
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 349 bits (176), Expect = 6e-93 Identities = 276/308 (89%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||||||||||||||||||| | |||||| |||||||| ||||||||||||||| || Sbjct: 1038 agccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgg 1097 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||||||||| ||||| |||||||||| |||| | ||| |||| ||||||||||| Sbjct: 1098 gtgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgact 1157 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 1158 ggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 1217 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| |||||| || | |||||||| Sbjct: 1218 ctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggta 1277 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1278 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1337 Query: 457 agatatga 464 ||| |||| Sbjct: 1338 agacatga 1345 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 493 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 552 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 553 aaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtg 1442 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 944 caagcagtgggagaagaatctaatctttgaccgcgtgcctgttgaagaatgagccggcga 1003 Query: 116 ctcataggcagtggcttggttaaggg 141 || ||| |||||||| |||||||||| Sbjct: 1004 cttataagcagtggcctggttaaggg 1029
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 347 bits (175), Expect = 3e-92 Identities = 276/307 (89%), Gaps = 2/307 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 ||||||||||||||| |||| || | || || |||||||| |||| |||||||||| || Sbjct: 591 agccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacccgaacccgg 649 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||||||||| ||||| |||| ||||| |||| | ||| |||||||||||||||| Sbjct: 650 gtgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtccgaaccgact 709 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 710 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 769 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||| Sbjct: 770 ctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggta 829 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 830 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 889 Query: 457 agatatg 463 || |||| Sbjct: 890 aggtatg 896 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 493 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 552 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 553 aaggcccctaaatgaccgctcagtgataa 581 |||||||| |||||||||||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataa 1000 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 497 caagcagtgggaggagaatagaatctctgaccgcgtgcctgttgaagaatgagccggcga 556 Query: 116 ctcataggcagtggcttggttaag 139 || ||| | |||||| |||||||| Sbjct: 557 cttataagtagtggcctggttaag 580
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 333 bits (168), Expect = 4e-88 Identities = 270/301 (89%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 221 ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| Sbjct: 642 agcgaaagcgagtctgaatagggcacttttgtcactttttatggacccgaacccgggtga 701 Query: 222 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 281 |||| |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 702 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 761 Query: 282 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 341 ||||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 762 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctag 821 Query: 342 ctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaa 397 |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| Sbjct: 822 ctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaa 881 Query: 398 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 882 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatacta 941 Query: 458 g 458 | Sbjct: 942 g 942 Score = 147 bits (74), Expect = 5e-32 Identities = 86/90 (95%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 552 taaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||| ||||| |||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataa 1049 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 325 bits (164), Expect = 9e-86 Identities = 273/308 (88%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||||| || Sbjct: 597 agccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaacccgg 656 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||||||||| ||||||||||| |||| |||||| || |||||||||||||||| Sbjct: 657 gtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgact 716 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | ||||||| || || |||||||| ||||| ||||||||||||||||||||||| | ||| Sbjct: 717 ggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcggag 776 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 396 |||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 777 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggta 836 Query: 397 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||||||||||||||||||||||| | | ||||||||||| || |||||||||||||||| Sbjct: 837 aagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatact 896 Query: 457 agatatga 464 | |||||| Sbjct: 897 aaatatga 904 Score = 133 bits (67), Expect = 7e-28 Identities = 85/91 (93%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 551 ctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||||||||||| |||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataa 1005 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 56 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct: 503 caagcagtgggaggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcga 562 Query: 116 ctcataggcagtggcttggttaagg 140 || |||||||||||| ||||||||| Sbjct: 563 cttataggcagtggcctggttaagg 587
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 262 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 321 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 322 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 381 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 382 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 441 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 442 caaactctgaatactagatat 462 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 307 bits (155), Expect = 2e-80 Identities = 265/299 (88%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 790 agcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatc 849 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || |||||||||||||||||||| | | |||| || || |||||||||||| |||||| Sbjct: 850 taaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgtt 909 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 910 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 969 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagca 401 |||||||||||||||||||||||||||||| ||| || ||| | ||||||||||||||| Sbjct: 970 ggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagca 1029 Query: 402 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 460 |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1030 ctgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 552 taaggcccctaaatgaccgctcagtg 577 |||||||||| |||| ||||| |||| Sbjct: 1163 taaggcccctcaatggccgctaagtg 1188 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 189 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 248 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 249 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 308 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 309 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 368 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 369 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 425 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 426 cggtaccaaatcgaggcaaactctgaatactaga 459 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 301 bits (152), Expect = 1e-78 Identities = 174/180 (96%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 145 ggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 204 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 5 ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 63 Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 64 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 123 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 301 bits (152), Expect = 1e-78 Identities = 152/152 (100%) Strand = Plus / Minus Query: 430 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 490 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 550 gctaaggcccctaaatgaccgctcagtgataa 581 |||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataa 368
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 383 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 384 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 442 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 443 aaactctgaatactagatatgac 465 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 554 aggcccctaaatg 566 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgat 190 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 383 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 384 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 442 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 443 aaactctgaatactagatatgac 465 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 554 aggcccctaaatg 566 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgat 190 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 383 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 384 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 442 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 443 aaactctgaatactagatatgac 465 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 554 aggcccctaaatg 566 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgat 190 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 216 |||| |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| | Sbjct: 2451 agccatagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccg 2510 Query: 217 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 276 ||||||||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| Sbjct: 2511 ggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgat 2570 Query: 277 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 336 ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2571 cgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 2630 Query: 337 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggt 395 ||||||||||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 2631 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggt 2690 Query: 396 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 2691 aaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatac 2750 Query: 456 ta 457 || Sbjct: 2751 ta 2752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 564 at 565 || Sbjct: 2838 at 2839 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2427
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 216 |||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| | Sbjct: 114797 agccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccg 114738 Query: 217 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 276 ||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || Sbjct: 114737 ggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgat 114678 Query: 277 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 336 | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 114677 taatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 114618 Query: 337 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 395 ||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||||| Sbjct: 114617 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 114558 Query: 396 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114557 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 114498 Query: 456 ta 457 || Sbjct: 114497 ta 114496 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 216 |||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| | Sbjct: 2720 agccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccg 2779 Query: 217 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 276 ||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || Sbjct: 2780 ggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgat 2839 Query: 277 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 336 | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2840 taatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 2899 Query: 337 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 395 ||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||||| Sbjct: 2900 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 2959 Query: 396 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2960 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 3019 Query: 456 ta 457 || Sbjct: 3020 ta 3021 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 551 ctaaggcccctaaat 565 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 551 ctaaggcccctaaat 565 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 114821 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2696
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 192 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 251 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 252 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 311 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 312 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 371 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 372 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 428 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 429 taccaaatcgaggcaaactctgaatactaga 459 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 147 bits (74), Expect = 5e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||||||||| |||| Sbjct: 1026 taaggcccctaaatgaccgctaagtg 1051 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 138 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 394 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 395 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 454 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 455 ctaga 459 ||||| Sbjct: 935 ctaga 939 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||| ||||| |||| Sbjct: 1017 taaggcccctaaatggccgctaagtg 1042 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 138 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 222 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 223 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 282 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 283 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 342 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 343 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 399 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 400 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 394 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 395 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 454 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 455 ctaga 459 ||||| Sbjct: 2817 ctaga 2821 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||||||||| ||||| |||| Sbjct: 2899 taaggcccctaaatggccgctaagtg 2924 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 138 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 283 bits (143), Expect = 3e-73 Identities = 260/299 (86%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| || Sbjct: 2192 agccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacccgg 2251 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 ||||||| |||| |||||||||||||| | | | ||| || |||||||||||||||| Sbjct: 2252 atgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccgact 2311 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 2312 gatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccggag 2371 Query: 338 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 397 |||||||||||||||||||||||||||||||||||| ||| | | | | ||||||| Sbjct: 2372 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggtaa 2431 Query: 398 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2432 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 2565 taaggcccctaaat 2578 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 |||| ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaa 321 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 382 aaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggt 441 Query: 347 tctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgt 405 ||||||||||||| ||| ||||||||| || | |||||| |||||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgt 501 Query: 406 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 502 ttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 551 ctaaggcccctaaatg 566 |||||| ||| ||||| Sbjct: 626 ctaaggtcccaaaatg 641 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 90 gtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 383 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 384 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 443 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 444 aactctgaatactagata 461 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 551 ctaaggcccctaaatga 567 |||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatga 1020 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 383 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 384 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 443 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 444 aactctgaatactagata 461 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 551 ctaaggcccctaaatga 567 |||||||||| |||||| Sbjct: 25813 ctaaggccccaaaatga 25829 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 347 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 405 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 406 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 347 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 405 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 406 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 189932 taaggcccctaaat 189945 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 151359 taaggcccctaaat 151372 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 89 cgtgcctgttgaagaatgagccggcgactcatag 122 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 89 cgtgcctgttgaagaatgagccggcgactcatag 122 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 280 bits (141), Expect = 5e-72 Identities = 178/189 (94%), Gaps = 6/189 (3%) Strand = Plus / Minus Query: 80 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 140 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 199 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 123 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 70 Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 69 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 10 Query: 260 cagaggtcc 268 ||||||| Sbjct: 9 tggaggtcc 1
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 347 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 404 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 7e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 347 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 404 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 554 aggcccctaaat 565 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 494 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 553 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 554 aggcccctaaat 565 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggc 150169 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 90 gtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggc 188612
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 380 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 437 cgaggcaaactctgaatact 456 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 1025 taaggcccctaaat 1038 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 259 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 260 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 320 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 379 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 380 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 436 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 437 cgaggcaaactctgaatact 456 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 2763 taaggcccctaaat 2776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| || Sbjct: 5972 agccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgg 5913 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 5912 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 5853 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 5852 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 5793 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 5792 ctagctggttctccccgaaatacgttgaggcg 5761 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 564 at 565 || Sbjct: 5585 at 5584
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| || Sbjct: 211800 agccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgg 211859 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 211860 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 211919 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 211920 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 211979 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 211980 ctagctggttctccccgaaatacgttgaggcg 212011 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 564 at 565 || Sbjct: 212187 at 212188
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 2e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 221 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 222 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 281 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 282 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 341 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 342 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 398 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 399 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 141 g 141 | Sbjct: 598 g 598 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 552 taaggcccctaaatgaccgctcagtg 577 ||||||||| |||| ||||| |||| Sbjct: 993 taaggccccagaatggccgctaagtg 1018
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 347 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 403 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 404 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 551 ctaaggcccctaaatgaccgctcagtgataa 581 |||||| ||| |||| | |||| |||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataa 656 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 125 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 266 bits (134), Expect = 7e-68 Identities = 149/153 (97%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 108033 aaagaacccccagtgggtaatgaaatag-aacgtgaaaccgtgctgagctcccaaccagt 107975 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107974 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 107915 Query: 124 cagtggcttggttaagggaacggaacccaccgg 156 ||||||||||||||||||||||||||||||||| Sbjct: 107914 cagtggcttggttaagggaacggaacccaccgg 107882
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 266 bits (134), Expect = 7e-68 Identities = 134/134 (100%) Strand = Plus / Plus Query: 448 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 508 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 568 ccgctcagtgataa 581 |||||||||||||| Sbjct: 121 ccgctcagtgataa 134
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 137128 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 137187 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 137188 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 137247 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 137248 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 137307 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 400 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 137308 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 137367 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137368 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 48416 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 48357 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 48356 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 48297 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 48296 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 48237 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 400 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 48236 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 48177 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 458 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48176 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 552 taaggcccctaaatg 566 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 552 taaggcccctaaatg 566 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| | Sbjct: 356103 agccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctg 356162 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 356163 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 356222 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 356223 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggag 356282 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 356283 ctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 44.1 bits (22), Expect = 0.51 Identities = 52/62 (83%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 564 at 565 || Sbjct: 356490 at 356491
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 260 bits (131), Expect = 5e-66 Identities = 270/313 (86%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 212 |||| ||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 766 agccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaa 825 Query: 213 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 272 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 826 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 885 Query: 273 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 332 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 886 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 945 Query: 333 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 389 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 946 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1004 Query: 390 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 448 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1005 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1064 Query: 449 tgaatactagata 461 |||||||||||| Sbjct: 1065 agaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 526 agagggaaacagcccggatcaccagctaaggcccctaaatg 566 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 5e-66 Identities = 258/299 (86%), Gaps = 6/299 (2%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatc 694 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||| ||||||||| |||||| | || |||||||||||| || ||| Sbjct: 695 taaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgtt 754 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||||| || |||||||||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 755 gaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagct 814 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaa 397 |||||||||||||||||||||||||||||| || || ||| || ||||||||||| Sbjct: 815 ggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaa 874 Query: 398 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 488 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 547 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 548 cagctaaggcccctaaatgaccgctcagtgataa 581 ||||||||||||| |||| |||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataa 1041 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 260 bits (131), Expect = 5e-66 Identities = 140/142 (98%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 486 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 544 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 604 Query: 124 cagtggcttggttaagggaacg 145 |||||||||||||||||||||| Sbjct: 605 cagtggcttggttaagggaacg 626
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 260 bits (131), Expect = 5e-66 Identities = 270/313 (86%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 212 |||| ||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 766 agccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaa 825 Query: 213 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 272 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 826 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 885 Query: 273 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 332 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 886 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 945 Query: 333 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 389 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 946 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1004 Query: 390 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 448 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1005 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1064 Query: 449 tgaatactagata 461 |||||||||||| Sbjct: 1065 agaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 526 agagggaaacagcccggatcaccagctaaggcccctaaatg 566 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 347 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 403 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 404 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 551 ctaaggcccctaaat 565 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 125 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 215 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 216 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 275 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 276 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 335 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 336 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 392 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 393 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 451 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 452 atactagatatg 463 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 552 taaggcccctaaatg 566 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 141 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 2138156 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 2138097 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 2138096 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 2138037 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 2138036 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 2137977 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 2137976 ctagctggttctccccgaaatacgttgaggcg 2137945 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 476704 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 476763 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 476764 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 476823 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 476824 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 476883 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 476884 ctagctggttctccccgaaatacgttgaggcg 476915 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 564 at 565 || Sbjct: 2137769 at 2137768 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 564 at 565 || Sbjct: 477091 at 477092
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 339407 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 339348 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 339347 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 339288 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 339287 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 339228 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 339227 ctagctggttctccccgaaatacgttgaggcg 339196 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 132467 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 132408 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 132407 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 132348 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 132347 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 132288 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 132287 ctagctggttctccccgaaatacgttgaggcg 132256 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 564 at 565 || Sbjct: 339020 at 339019 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 564 at 565 || Sbjct: 132080 at 132079
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 1e-63 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 192 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 251 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 252 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 311 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 312 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 371 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 372 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 430 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 431 ccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 552 taaggcccctaaat 565 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 ||||||| ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc 2370
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 344 ggttctccccgaaatgcgttgaggcgcagc 373 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 451 aatac 455 ||||| Sbjct: 548 aatac 552 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 552 taaggcccctaaatgaccgctcagtga 578 ||||| ||| |||| ||| || ||||| Sbjct: 628 taaggtccccaaataaccactaagtga 654 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 344 ggttctccccgaaatgcgttgaggcgcagc 373 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 451 aatac 455 ||||| Sbjct: 548 aatac 552 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 551 ctaaggcccctaaatgaccgctcagtgataa 581 |||||| ||| ||||||| ||| |||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataa 657 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 262 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 321 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 322 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 381 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 382 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 438 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 439 aggcaaactctgaatactag 458 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 84 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 550 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 551 ctaaggcccctaaatga 567 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 191 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 246 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 250 bits (126), Expect = 4e-63 Identities = 138/141 (97%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 446 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 504 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 564 Query: 124 cagtggcttggttaagggaac 144 ||||||||||||||||||||| Sbjct: 565 cagtggcttggttaagggaac 585
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 310/369 (84%), Gaps = 6/369 (1%) Strand = Plus / Plus Query: 88 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 147 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 148 acccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 207 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| ||| Sbjct: 247 accc----gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagac 302 Query: 208 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 267 ||||||| |||||||||| ||||| |||||||||||||||| ||| || ||| |||||| Sbjct: 303 ccgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtc 362 Query: 268 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 327 ||||||||| |||||| | ||||||||| |||||||||||||||||||||| || Sbjct: 363 cgaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatc 422 Query: 328 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 387 |||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| Sbjct: 423 gaacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacag 482 Query: 388 ct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 446 || |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 483 ctggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaac 542 Query: 447 tctgaatac 455 || |||||| Sbjct: 543 tcagaatac 551 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 551 ctaaggcccctaaatg 566 |||||| ||||||||| Sbjct: 626 ctaaggtccctaaatg 641
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 222 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 223 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 282 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 283 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 342 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 343 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 400 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 401 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 460 tatg 463 |||| Sbjct: 958 tatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 552 taaggcccctaaatg 566 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 131 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 222 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 223 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 282 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 283 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 342 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 343 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 400 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 401 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 459 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 460 tatg 463 |||| Sbjct: 958 tatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 552 taaggcccctaaatg 566 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 131 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttg 378 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 551 ctaaggcccctaaatgaccgctcagtgat 579 |||||| ||| ||||| ||||||||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgat 657 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 451 aatac 455 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcga 115 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 244 bits (123), Expect = 3e-61 Identities = 268/313 (85%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 212 |||| ||||||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 820 agccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacccgaa 879 Query: 213 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 272 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 880 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 939 Query: 273 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 332 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 940 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 999 Query: 333 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 389 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 1000 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1058 Query: 390 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 448 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1059 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1118 Query: 449 tgaatactagata 461 |||||||||||| Sbjct: 1119 agaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 526 agagggaaacagcccggatcaccagctaaggcccctaaatg 566 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 320614 attaacgctaagtgataa 320631 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 3037 attaacgctaagtgataa 3054 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 3038 attaacgctaagtgataa 3055 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 400 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 492 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 551 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 552 taaggcccctaaatga 567 ||||| ||| |||||| Sbjct: 626 taaggtccccaaatga 641 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 242 bits (122), Expect = 1e-60 Identities = 252/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 167 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 226 |||| ||||||| || ||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 227 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 286 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 287 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 346 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 347 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 403 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcact 499 Query: 404 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 |||||||||||||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 551 ctaaggcccctaaat 565 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 125 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 19843 attaacgctaagtgataa 19826 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 1597 attaacgctaagtgataa 1580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 316103 attaacgctaagtgataa 316120 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcga 439 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 242 bits (122), Expect = 1e-60 Identities = 265/307 (86%), Gaps = 8/307 (2%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 220 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtg 713 Query: 221 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 280 |||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| ||| Sbjct: 714 atctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgat 773 Query: 281 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 340 |||||| |||| |||||||||||||| |||||| ||||| ||| |||||| | |||||| Sbjct: 774 gttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagcta 833 Query: 341 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 397 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 834 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 892 Query: 398 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 456 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 893 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 952 Query: 457 agatatg 463 ||||||| Sbjct: 953 agatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 512 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 566 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 451 aatac 455 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 451 aatac 455 ||||| Sbjct: 1049320 aatac 1049316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 551 ctaagg 556 |||||| Sbjct: 1659503 ctaagg 1659508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 551 ctaagg 556 |||||| Sbjct: 1049241 ctaagg 1049236
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 242 bits (122), Expect = 1e-60 Identities = 188/210 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatc 692 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || |||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| Sbjct: 693 taaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgtt 752 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 753 gaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 812 Query: 344 ggttctccccgaaatgcgttgaggcgcagc 373 |||||||||||||||||||||||||||||| Sbjct: 813 ggttctccccgaaatgcgttgaggcgcagc 842 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 551 ctaaggcccctaaatgaccgctcagtg 577 |||||||||| ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtg 1030 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 386 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 445 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 446 ctctgaatactagata 461 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 242 bits (122), Expect = 1e-60 Identities = 131/133 (98%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 4 aaagnacccccagtgggtagtgaaatagnaacgtgaaaccgtgctgagctcccaagcagt 63 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 359 aaagaacccccagtgggtagtgaaatag-aacgtgaaaccgtgctgagctcccaagcagt 417 Query: 64 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 477 Query: 124 cagtggcttggtt 136 ||||||||||||| Sbjct: 478 cagtggcttggtt 490
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 451 aatac 455 ||||| Sbjct: 1186 aatac 1190 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 551 ctaagg 556 |||||| Sbjct: 1265 ctaagg 1270
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| | |||| |||||||||| |||||||| Sbjct: 2851 agcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaacccgggtgatc 2910 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| ||| || | | |||||||||||||||||||||| Sbjct: 2911 taaccatggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactgatgtt 2970 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2971 gaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 3030 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||| ||||| Sbjct: 3031 ggttctccccgaaatacgtttaggcg 3056 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 391 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 449 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 450 gaatac 455 |||||| Sbjct: 3139 gaatac 3144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 564 atgaccgctcagtgataa 581 || | |||| |||||||| Sbjct: 3232 ataagcgctaagtgataa 3249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 2816
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 344 ggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 451 aatac 455 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 391 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 450 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 451 aatac 455 ||||| Sbjct: 571559 aatac 571563 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 551 ctaagg 556 |||||| Sbjct: 2657283 ctaagg 2657278 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 491 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 550 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 551 ctaagg 556 |||||| Sbjct: 571638 ctaagg 571643
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 240 bits (121), Expect = 4e-60 Identities = 236/272 (86%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 192 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 251 |||||| |||||||||||||||| |||||||||| |||| |||||||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggta 915 Query: 252 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 311 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| |||| Sbjct: 916 acaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattag 975 Query: 312 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 371 ||| ||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 976 gggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgca 1035 Query: 372 gcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcgg 428 || ||| || | |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1036 gcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcgg 1095 Query: 429 taccaaatcgaggcaaactctgaatactagat 460 |||||| ||| ||||||||| ||||||||||| Sbjct: 1096 taccaagtcgtggcaaactcagaatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 526 agagggaaacagcccggatcaccagctaaggcccctaaatg 566 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 190 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 249 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 39703 Query: 250 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 309 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 39702 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 39643 Query: 310 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 39642 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 39583 Query: 370 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 428 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 39582 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 39523 Query: 429 taccaaatcgaggcaaactctgaatacta 457 ||||||||||| ||||||||||||||||| Sbjct: 39522 taccaaatcgatgcaaactctgaatacta 39494 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 190 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 249 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 19697 Query: 250 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 309 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 19698 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 19757 Query: 310 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 19758 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 19817 Query: 370 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 428 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 19818 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 19877 Query: 429 taccaaatcgaggcaaactctgaatacta 457 ||||||||||| ||||||||||||||||| Sbjct: 19878 taccaaatcgatgcaaactctgaatacta 19906 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 564 at 565 || Sbjct: 39408 at 39407 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 564 at 565 || Sbjct: 19992 at 19993 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 93 cctgttgaagaatgagccggcgactcataggcagtggc 130 ||||||||||||||||||||||||| |||| |||||| Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggc 39818 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 93 cctgttgaagaatgagccggcgactcataggcagtggc 130 ||||||||||||||||||||||||| |||| |||||| Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggc 19582
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 206 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 265 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 266 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 325 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 326 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 385 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 386 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 444 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 445 actctgaatacta 457 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 81 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 564 at 565 || Sbjct: 1470 at 1471
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 205 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 264 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 265 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 324 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 325 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 384 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 385 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 442 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 443 aaactctgaatactagatatg 463 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgact 117 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 490 ggccagtgagacgatgggggataagcttcat 520 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Minus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 1775853 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 1775794 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 1775793 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 1775734 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 1775733 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 1775674 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 1775673 ctagctggttctccccgaaatacgttgaggcg 1775642 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 376216 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 376275 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 376276 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 376335 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 376336 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 376395 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 376396 ctagctggttctccccgaaatacgttgaggcg 376427 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 564 at 565 || Sbjct: 1775466 at 1775465 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 564 at 565 || Sbjct: 376603 at 376604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 2878 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 2937 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 2938 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 2997 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 2998 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 3057 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 3058 ctagctggttctccccgaaatacgttgaggcg 3089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 564 at 565 || Sbjct: 3265 at 3266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 405 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 455 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 217 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 488 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 547 Query: 218 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 277 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 548 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 607 Query: 278 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 337 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 608 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 667 Query: 338 ctagctggttctccccgaaatgcgttgaggcg 369 ||||||||||||||||||||| |||||||||| Sbjct: 668 ctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 130 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 238 bits (120), Expect = 2e-59 Identities = 265/310 (85%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 158 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 215 |||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 722 agccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccgaaccc 781 Query: 216 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 275 ||||||||||| |||| |||||||||||||||| | | || || |||||||||||||| Sbjct: 782 gggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaaccga 841 Query: 276 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 335 | ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | | Sbjct: 842 ccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcgg 901 Query: 336 agctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatctaggg 393 |||||||||| ||||||||||||||||||||||||||| || | | | |||||| | Sbjct: 902 agctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatctagag 961 Query: 394 gtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 452 ||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| ||| Sbjct: 962 gtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaa 1021 Query: 453 tactagatat 462 |||||||||| Sbjct: 1022 tactagatat 1031 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 82 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 526 agagggaaacagcccggatcaccagctaaggcccctaaatga 567 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 234 bits (118), Expect = 3e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 673 agcgaaagcaagtctgaatagggcgcttgtcactttttatggacccgaacctgagtgatc 732 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 733 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 792 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| ||||||||||| Sbjct: 793 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcagagctagct 852 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 400 || ||||| ||||||| ||||||||||||| ||||| ||| | | |||||||||||| Sbjct: 853 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagttaggggtaaagc 912 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 913 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 969 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 564 atgaccgctcagtg 577 ||| ||||| |||| Sbjct: 1059 atggccgctaagtg 1072 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaagg 655
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 234 bits (118), Expect = 3e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | |||||| Sbjct: 192504 agcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgagtgatc 192563 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 192564 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 192623 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 192624 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagctagct 192683 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 400 || ||||| ||||||| ||||||||||||| ||||| ||| | || |||||||||||| Sbjct: 192684 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggtaaagc 192743 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 192744 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 192800 Score = 234 bits (118), Expect = 3e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Minus Query: 164 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 223 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | |||||| Sbjct: 144278 agcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgagtgatc 144219 Query: 224 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 283 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 144218 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 144159 Query: 284 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 343 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 144158 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagctagct 144099 Query: 344 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 400 || ||||| ||||||| ||||||||||||| ||||| ||| | || |||||||||||| Sbjct: 144098 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggtaaagc 144039 Query: 401 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 457 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 144038 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaagg 192486 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 83 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 140 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaagg 144296 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 564 atgaccgctcagtg 577 ||| ||||| |||| Sbjct: 192890 atggccgctaagtg 192903 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 504 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 563 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 564 atgaccgctcagtg 577 ||| ||||| |||| Sbjct: 143892 atggccgctaagtg 143879 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,277,300 Number of Sequences: 3902068 Number of extensions: 3277300 Number of successful extensions: 64720 Number of sequences better than 10.0: 2663 Number of HSP's better than 10.0 without gapping: 2683 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 50237 Number of HSP's gapped (non-prelim): 13808 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
