ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473883.1| Oryza sativa (japonica cultivar-group), predic... 359 6e-96
2dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 6e-96
3emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 131 3e-27
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5gb|AF468223.1| Nicotiana tabacum phospholipase A1 mRNA, complete... 44 0.49
6gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
7gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
8gb|AE009952.1| Yersinia pestis KIM, complete genome 42 1.9
9gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome... 42 1.9
10emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chr... 42 1.9
11gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Can... 42 1.9
12gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosom... 42 1.9
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
14gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complet... 42 1.9
15gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Canc... 42 1.9
16gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosom... 40 7.6
17ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (... 40 7.6
18gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosom... 40 7.6
19emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in... 40 7.6
20ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.6
21gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.6
22emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complet... 40 7.6
23emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 ... 40 7.6
24ref|XM_393459.2| PREDICTED: Apis mellifera hypothetical LOC40997... 40 7.6
25gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J... 40 7.6
26gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13... 40 7.6
27emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chr... 40 7.6 
>ref|XM_473883.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1602

 Score =  359 bits (181), Expect = 6e-96
 Identities = 444/529 (83%), Gaps = 2/529 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    aatggcaagnaaaagtgccatactggagtcgtatgaaccagnatgaggcaataaagatga 64
            ||||||||| |||||||||||  | ||||| ||||| |||| |||| |||||||| ||||
Sbjct: 835  aatggcaag-aaaagtgccatgttagagtcatatgagccag-atgaagcaataaaaatga 892

                                                                        
Query: 65   ttcaaaaagctctttccaagcatgagattatctctgatggaaatcacattcctctgcctc 124
            ||  | |||||||||||||||||||||| || |||||||| |  ||||||||  |||| |
Sbjct: 893  ttagagaagctctttccaagcatgagatcatttctgatggtatgcacattccattgcccc 952

                                                                        
Query: 125  ttaatgaggatatattaatatgggcgaaggaaactcaagatatcttatcccaggcaaagc 184
            || ||  ||||||||| | |||||| || || || || ||| | || | | | |||||||
Sbjct: 953  ttgatatggatatattgagatgggcaaaagagacacaggatgttttgtgcaatgcaaagc 1012

                                                                        
Query: 185  ttccaaaatcagtgaagttctacaatatttacgggattgattatgagactgctcatactg 244
            |||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |
Sbjct: 1013 ttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcccataccg 1072

                                                                        
Query: 245  tttgctacgggagcaaacgccaccctgtttcaaatcttagtcacctcttatatactcagg 304
            || ||||||||||  ||| ||| ||  |||||||||| ||| ||||||| ||||||||||
Sbjct: 1073 ttcgctacgggagtgaacaccatccaatttcaaatctcagtgacctcttgtatactcagg 1132

                                                                        
Query: 305  gtaaatacatctgtgttgatggtgatggatccgttcccgcagaatcagcaaaggcggacg 364
            | || |||||||||||||||||||||||||| || || | ||||||||||||||| || |
Sbjct: 1133 gcaactacatctgtgttgatggtgatggatctgtccctgtagaatcagcaaaggcagatg 1192

                                                                        
Query: 365  gccttgatgcagtggcgagaattggggttgctgccgaccaccgaggaatcgtgtgcgacc 424
            |||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| || || |
Sbjct: 1193 gcctcgatgcagtggcaagagttggggttgctgcagaccaccgaggaatcgtctgtgatc 1252

                                                                        
Query: 425  accacgtgttccgcatagtccagcactggctgcacgcaggcgaacctgacccattctacg 484
              ||||||||||| ||| | ||||||||||| || || || || ||||||||||||||||
Sbjct: 1253 gtcacgtgttccggataattcagcactggctccatgccggtgagcctgacccattctacg 1312

                                                             
Query: 485  accccctcaatgactatgtcatcctgccaaccatctacgagatcgagaa 533
            | |||||||| ||||| ||||| || |||||   || ||||||||||||
Sbjct: 1313 atcccctcaacgactacgtcatactcccaacagccttcgagatcgagaa 1361
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>dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J22, full
            insert sequence
          Length = 2334

 Score =  359 bits (181), Expect = 6e-96
 Identities = 444/529 (83%), Gaps = 2/529 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    aatggcaagnaaaagtgccatactggagtcgtatgaaccagnatgaggcaataaagatga 64
            ||||||||| |||||||||||  | ||||| ||||| |||| |||| |||||||| ||||
Sbjct: 1269 aatggcaag-aaaagtgccatgttagagtcatatgagccag-atgaagcaataaaaatga 1326

                                                                        
Query: 65   ttcaaaaagctctttccaagcatgagattatctctgatggaaatcacattcctctgcctc 124
            ||  | |||||||||||||||||||||| || |||||||| |  ||||||||  |||| |
Sbjct: 1327 ttagagaagctctttccaagcatgagatcatttctgatggtatgcacattccattgcccc 1386

                                                                        
Query: 125  ttaatgaggatatattaatatgggcgaaggaaactcaagatatcttatcccaggcaaagc 184
            || ||  ||||||||| | |||||| || || || || ||| | || | | | |||||||
Sbjct: 1387 ttgatatggatatattgagatgggcaaaagagacacaggatgttttgtgcaatgcaaagc 1446

                                                                        
Query: 185  ttccaaaatcagtgaagttctacaatatttacgggattgattatgagactgctcatactg 244
            |||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |
Sbjct: 1447 ttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcccataccg 1506

                                                                        
Query: 245  tttgctacgggagcaaacgccaccctgtttcaaatcttagtcacctcttatatactcagg 304
            || ||||||||||  ||| ||| ||  |||||||||| ||| ||||||| ||||||||||
Sbjct: 1507 ttcgctacgggagtgaacaccatccaatttcaaatctcagtgacctcttgtatactcagg 1566

                                                                        
Query: 305  gtaaatacatctgtgttgatggtgatggatccgttcccgcagaatcagcaaaggcggacg 364
            | || |||||||||||||||||||||||||| || || | ||||||||||||||| || |
Sbjct: 1567 gcaactacatctgtgttgatggtgatggatctgtccctgtagaatcagcaaaggcagatg 1626

                                                                        
Query: 365  gccttgatgcagtggcgagaattggggttgctgccgaccaccgaggaatcgtgtgcgacc 424
            |||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| || || |
Sbjct: 1627 gcctcgatgcagtggcaagagttggggttgctgcagaccaccgaggaatcgtctgtgatc 1686

                                                                        
Query: 425  accacgtgttccgcatagtccagcactggctgcacgcaggcgaacctgacccattctacg 484
              ||||||||||| ||| | ||||||||||| || || || || ||||||||||||||||
Sbjct: 1687 gtcacgtgttccggataattcagcactggctccatgccggtgagcctgacccattctacg 1746

                                                             
Query: 485  accccctcaatgactatgtcatcctgccaaccatctacgagatcgagaa 533
            | |||||||| ||||| ||||| || |||||   || ||||||||||||
Sbjct: 1747 atcccctcaacgactacgtcatactcccaacagccttcgagatcgagaa 1795
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>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score =  131 bits (66), Expect = 3e-27
 Identities = 144/170 (84%)
 Strand = Plus / Plus

                                                                         
Query: 364   ggccttgatgcagtggcgagaattggggttgctgccgaccaccgaggaatcgtgtgcgac 423
             ||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| || || 
Sbjct: 74382 ggcctcgatgcagtggcaagagttggggttgctgcagaccaccgaggaatcgtctgtgat 74441

                                                                         
Query: 424   caccacgtgttccgcatagtccagcactggctgcacgcaggcgaacctgacccattctac 483
             |  ||||||||||| ||| | ||||||||||| || || || || |||||||||||||||
Sbjct: 74442 cgtcacgtgttccggataattcagcactggctccatgccggtgagcctgacccattctac 74501

                                                               
Query: 484   gaccccctcaatgactatgtcatcctgccaaccatctacgagatcgagaa 533
             || |||||||| ||||| ||||| || |||||   || ||||||||||||
Sbjct: 74502 gatcccctcaacgactacgtcatactcccaacagccttcgagatcgagaa 74551



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                         
Query: 178   gcaaagcttccaaaatcagtgaagttctacaatatttacgggattgattatgagactgct 237
             ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| 
Sbjct: 73552 gcaaagcttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcc 73611

                  
Query: 238   catac 242
             |||||
Sbjct: 73612 catac 73616



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 300   tcagggtaaatacatctgtgttgatggtgatggatccgttcccgcagaatcagcaaagg 358
             |||||| || |||||||||||||||||||||||||| || || | ||||||||||||||
Sbjct: 74212 tcagggcaactacatctgtgttgatggtgatggatctgtccctgtagaatcagcaaagg 74270



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                         
Query: 5     aatggcaagnaaaagtgccatactggagtcgtatgaaccagnatgaggcaataaagatga 64
             ||||||||| |||||||||||  | ||||| ||||| |||| |||| |||||||| ||||
Sbjct: 73288 aatggcaag-aaaagtgccatgttagagtcatatgagccag-atgaagcaataaaaatga 73345

                                       
Query: 65    ttcaaaaagctctttccaagcatgag 90
             ||  | ||||||||||||||||||||
Sbjct: 73346 ttagagaagctctttccaagcatgag 73371
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  131 bits (66), Expect = 3e-27
 Identities = 144/170 (84%)
 Strand = Plus / Plus

                                                                            
Query: 364      ggccttgatgcagtggcgagaattggggttgctgccgaccaccgaggaatcgtgtgcgac 423
                ||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| || || 
Sbjct: 31252780 ggcctcgatgcagtggcaagagttggggttgctgcagaccaccgaggaatcgtctgtgat 31252839

                                                                            
Query: 424      caccacgtgttccgcatagtccagcactggctgcacgcaggcgaacctgacccattctac 483
                |  ||||||||||| ||| | ||||||||||| || || || || |||||||||||||||
Sbjct: 31252840 cgtcacgtgttccggataattcagcactggctccatgccggtgagcctgacccattctac 31252899

                                                                  
Query: 484      gaccccctcaatgactatgtcatcctgccaaccatctacgagatcgagaa 533
                || |||||||| ||||| ||||| || |||||   || ||||||||||||
Sbjct: 31252900 gatcccctcaacgactacgtcatactcccaacagccttcgagatcgagaa 31252949



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                            
Query: 178      gcaaagcttccaaaatcagtgaagttctacaatatttacgggattgattatgagactgct 237
                ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| 
Sbjct: 31251950 gcaaagcttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcc 31252009

                     
Query: 238      catac 242
                |||||
Sbjct: 31252010 catac 31252014



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 300      tcagggtaaatacatctgtgttgatggtgatggatccgttcccgcagaatcagcaaagg 358
                |||||| || |||||||||||||||||||||||||| || || | ||||||||||||||
Sbjct: 31252610 tcagggcaactacatctgtgttgatggtgatggatctgtccctgtagaatcagcaaagg 31252668



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                            
Query: 5        aatggcaagnaaaagtgccatactggagtcgtatgaaccagnatgaggcaataaagatga 64
                ||||||||| |||||||||||  | ||||| ||||| |||| |||| |||||||| ||||
Sbjct: 31251686 aatggcaag-aaaagtgccatgttagagtcatatgagccag-atgaagcaataaaaatga 31251743

                                          
Query: 65       ttcaaaaagctctttccaagcatgag 90
                ||  | ||||||||||||||||||||
Sbjct: 31251744 ttagagaagctctttccaagcatgag 31251769
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>gb|AF468223.1| Nicotiana tabacum phospholipase A1 mRNA, complete cds
          Length = 1691

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 325  ggtgatggatccgttcccgcagaatcagcaaaggcgga 362
            ||||||||| | ||||| || |||||||||||||||||
Sbjct: 1213 ggtgatggaactgttccagctgaatcagcaaaggcgga 1250
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
            complete sequence
          Length = 132017

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 179  caaagcttccaaaatcagtga 199
            |||||||||||||||||||||
Sbjct: 4979 caaagcttccaaaatcagtga 4999
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
              complete sequence
          Length = 149870

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 179    caaagcttccaaaatcagtga 199
              |||||||||||||||||||||
Sbjct: 114643 caaagcttccaaaatcagtga 114663
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 125     ttaatgaggatatattaatat 145
               |||||||||||||||||||||
Sbjct: 3576189 ttaatgaggatatattaatat 3576169
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>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence
          Length = 196368

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     caataaagatgattcaaaaag 73
              |||||||||||||||||||||
Sbjct: 112141 caataaagatgattcaaaaag 112121
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>emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chromosome 13 Contains ESTs,
              STSs and GSSs, complete sequence
          Length = 176446

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     ccaagcatgagattatctctg 100
              |||||||||||||||||||||
Sbjct: 135396 ccaagcatgagattatctctg 135376
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>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 154482

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    aaaatcagtgaagttctacaa 209
              |||||||||||||||||||||
Sbjct: 112195 aaaatcagtgaagttctacaa 112215
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>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence
          Length = 169547

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    caataaagatgattcaaaaag 73
             |||||||||||||||||||||
Sbjct: 67763 caataaagatgattcaaaaag 67743
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 179      caaagcttccaaaatcagtga 199
                |||||||||||||||||||||
Sbjct: 20116318 caaagcttccaaaatcagtga 20116338
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>gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complete sequence
          Length = 154814

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   aaatcacattcctctgcctct 125
             |||||||||||||||||||||
Sbjct: 10713 aaatcacattcctctgcctct 10733
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>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 149839

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   aaaatcagtgaagttctacaa 209
             |||||||||||||||||||||
Sbjct: 18930 aaaatcagtgaagttctacaa 18910
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>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete
             sequence
          Length = 181893

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   taaatacatctgtgttgatg 325
             ||||||||||||||||||||
Sbjct: 40724 taaatacatctgtgttgatg 40705
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>ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (DDB0191589), partial
            mRNA
          Length = 7659

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   ggcaataaagatgattcaaa 70
            ||||||||||||||||||||
Sbjct: 4915 ggcaataaagatgattcaaa 4934
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>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete
             sequence
          Length = 195132

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   attcctctgcctcttaatga 131
             ||||||||||||||||||||
Sbjct: 86931 attcctctgcctcttaatga 86912
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>emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in linkage group 23,
            complete sequence
          Length = 176131

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  attgattatgagactgctca 239
            ||||||||||||||||||||
Sbjct: 6816 attgattatgagactgctca 6835
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>ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03273)
           partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  aataaagatgattcaaaaag 73
           ||||||||||||||||||||
Sbjct: 664 aataaagatgattcaaaaag 683
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 514     accatctacgagatcgagaa 533
               ||||||||||||||||||||
Sbjct: 3798759 accatctacgagatcgagaa 3798740
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>emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complete genome, segment 8
          Length = 199050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     ccaagcatgagattatctct 99
              ||||||||||||||||||||
Sbjct: 100975 ccaagcatgagattatctct 100956
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>emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 in linkage group 23,
             complete sequence
          Length = 175139

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   attgattatgagactgctca 239
             ||||||||||||||||||||
Sbjct: 20232 attgattatgagactgctca 20251
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>ref|XM_393459.2| PREDICTED: Apis mellifera hypothetical LOC409970 (LOC409970), mRNA
          Length = 2324

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 534 agcaccacgaggaaacgtggcgac 557
           |||||||||||||| |||||||||
Sbjct: 590 agcaccacgaggaaccgtggcgac 567
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>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete
             sequence
          Length = 103157

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   agggtaaatacatctgtgttgatg 325
             ||||||||||||||| ||||||||
Sbjct: 82078 agggtaaatacatctttgttgatg 82101
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>gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence, complete
             sequence
          Length = 102183

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   agggtaaatacatctgtgttgatg 325
             ||||||||||||||| ||||||||
Sbjct: 34771 agggtaaatacatctttgttgatg 34794
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>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete
              sequence
          Length = 216475

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    aatcacattcctctgcctct 125
              ||||||||||||||||||||
Sbjct: 194455 aatcacattcctctgcctct 194436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,279,567
Number of Sequences: 3902068
Number of extensions: 4279567
Number of successful extensions: 72242
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72102
Number of HSP's gapped (non-prelim): 140
length of query: 563
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 540
effective length of database: 17,143,297,704
effective search space: 9257380760160
effective search space used: 9257380760160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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