ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1a02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||||||||||| Sbjct: 4556351 tactctctctgtttcaaaatataa 4556374 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 22901723 tactctctctgtttcataatataa 22901700
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||||||||||| Sbjct: 21691 tactctctctgtttcaaaatataa 21714
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 47810 atgtactctctccgtttcaaaatataa 47836
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaacctttt 201 ||||||||| |||||||||||||||| |||| Sbjct: 5722702 tactctctccgtttcaaaatataaacatttt 5722672 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 |||||| |||||||||||||||||| Sbjct: 482647 gtactccctctgtttcaaaatataa 482623 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 15615616 tactctctctgtttcaaaat 15615635 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaatataaa 195 |||| ||||||||||||||||||| Sbjct: 7678086 actccctctgtttcaaaatataaa 7678109 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||||||| ||||||||| Sbjct: 2665863 gtactctctctgttccaaaatata 2665840
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaatataa 194 ||||||||||||||||||||||| Sbjct: 79601 actctctctgtttcaaaatataa 79623
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaatataa 194 ||||||||||||||||||||||| Sbjct: 59476 actctctctgtttcaaaatataa 59498
>gb|AC156827.4| Medicago truncatula clone mth2-15c17, complete sequence Length = 110578 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Minus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 18632 atgtactctctccgtttcaaaatataa 18606
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataaacctttt 201 ||||||||| |||||||||||||||| |||| Sbjct: 108469 tactctctccgtttcaaaatataaacatttt 108499
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||||||||| |||||||| Sbjct: 11399 atgtactctctctgtttctaaatataa 11425
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 46.1 bits (23), Expect = 0.045 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 181 gtttcaaaatataa-accttttagagatttt 210 |||||||||||||| |||||||||||||||| Sbjct: 379 gtttcaaaatataagaccttttagagatttt 409
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 12880474 atgtactctctccgtttcaaaatataa 12880500 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatat 192 |||||||| |||||||||||||||| Sbjct: 24372158 atgtactccctctgtttcaaaatat 24372182 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgtactctctctgtttcaaaatat 192 ||||||| |||||||||||||||| Sbjct: 21142292 tgtactccctctgtttcaaaatat 21142315
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 ctctctctgtttcaaaatataaa 195 ||||||||||||||||||||||| Sbjct: 9974398 ctctctctgtttcaaaatataaa 9974420 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaa 195 ||||||||| ||||||||||||||| Sbjct: 17495312 tactctctccgtttcaaaatataaa 17495288 Score = 40.1 bits (20), Expect = 2.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaacctttta 202 |||| ||||| ||||||||||||||| ||||| Sbjct: 18812020 tactatctctatttcaaaatataaacatttta 18811989
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaacctttt 201 ||||||||| |||||||||||||||| |||| Sbjct: 5721915 tactctctccgtttcaaaatataaacatttt 5721885 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 |||||| |||||||||||||||||| Sbjct: 482645 gtactccctctgtttcaaaatataa 482621 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 15610150 tactctctctgtttcaaaat 15610169 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaatataaa 195 |||| ||||||||||||||||||| Sbjct: 7675921 actccctctgtttcaaaatataaa 7675944 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||||||| ||||||||| Sbjct: 2665973 gtactctctctgttccaaaatata 2665950
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 30170071 atgtactctctccgtttcaaaatataa 30170097 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataa 194 ||||||||||||| ||||||||||| Sbjct: 25661373 gtactctctctgtctcaaaatataa 25661397 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||| ||||||||||||| Sbjct: 39681264 gtactctctccgtttcaaaatata 39681241 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||| ||||||||||||||| Sbjct: 38362784 tactctctttgtttcaaaatataa 38362761 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||| ||||||||||| Sbjct: 37927179 tactctctctgtctcaaaatataa 37927202 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||| ||||||||||||| Sbjct: 28787238 tactctctctatttcaaaatataa 28787215 Score = 40.1 bits (20), Expect = 2.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataaacctttt 201 |||||| |||||||| ||||||||||| |||| Sbjct: 25661622 gtactccctctgttttaaaatataaacatttt 25661591 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aatgtactctctctgtttca 186 |||||||||||||||||||| Sbjct: 23632288 aatgtactctctctgtttca 23632269 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 19023897 tactctctctgtttcacaatataa 19023920 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 10208559 tactctctctgtttcagaatataa 10208536 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||||||| |||||||||| Sbjct: 8876155 tactctctctgttccaaaatataa 8876132
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 74893 atgtactctctccgtttcaaaatataa 74919
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 ctctctctgtttcaaaatataaa 195 ||||||||||||||||||||||| Sbjct: 3702 ctctctctgtttcaaaatataaa 3724
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 ctctctctgtttcaaaatataaa 195 ||||||||||||||||||||||| Sbjct: 129845 ctctctctgtttcaaaatataaa 129867
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatataa 194 |||||||||||| |||||||||||||| Sbjct: 12960681 atgtactctctccgtttcaaaatataa 12960707 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatat 192 |||||||| |||||||||||||||| Sbjct: 24683827 atgtactccctctgtttcaaaatat 24683851 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgtactctctctgtttcaaaatat 192 ||||||| |||||||||||||||| Sbjct: 21452533 tgtactccctctgtttcaaaatat 21452556
>gb|AC141436.17| Medicago truncatula clone mth2-31k19, complete sequence Length = 112268 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaac 196 ||||| |||||||||||||||||||| Sbjct: 66166 tactccctctgtttcaaaatataaac 66141
>gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete sequence Length = 118959 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaac 196 |||||| ||||||||||||||||||| Sbjct: 16193 tactctttctgtttcaaaatataaac 16168
>gb|AC139706.8| Medicago truncatula clone mth2-28n21, complete sequence Length = 106244 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataaac 196 ||||| |||||||||||||||||||| Sbjct: 40087 tactccctctgtttcaaaatataaac 40112
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 44.1 bits (22), Expect = 0.18 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 181 gtttcaaaatataa-accttttagagattt 209 |||||||||||||| ||||||||||||||| Sbjct: 10539 gtttcaaaatataagaccttttagagattt 10510
>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence Length = 124189 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaata 191 |||||||||||||||||||||| Sbjct: 95993 gtactctctctgtttcaaaata 96014
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 166 aaatgtactctctctgtttcaaaata 191 ||||||||||||| |||||||||||| Sbjct: 21356389 aaatgtactctctgtgtttcaaaata 21356414 Score = 40.1 bits (20), Expect = 2.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataaaccttttagag 205 |||||| ||||||| ||||||||||| |||||||| Sbjct: 21707012 gtactccctctgttccaaaatataaaaattttagag 21707047 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 18565925 tactctctctgtttcaaaat 18565944 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatata 193 ||||||||||||| |||||||||| Sbjct: 3646805 gtactctctctgtctcaaaatata 3646828
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatat 192 |||||||||||||||||||||| Sbjct: 22238200 tactctctctgtttcaaaatat 22238221 Score = 42.1 bits (21), Expect = 0.71 Identities = 30/33 (90%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataaaccttttag 203 ||||| ||| |||||||||||||||| |||||| Sbjct: 3297258 tactccctccgtttcaaaatataaacattttag 3297290 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctctgtttcaaaatataaa 195 |||||||||||||||||||| Sbjct: 8123878 tctctgtttcaaaatataaa 8123897 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaata 191 |||||||| ||||||||||||||| Sbjct: 7532839 atgtactccctctgtttcaaaata 7532862
>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0566A10 Length = 174367 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatat 192 |||||||||||||||||||||| Sbjct: 16623 tactctctctgtttcaaaatat 16644
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 166 aaatgtactctctctgtttcaaaata 191 ||||||||||||| |||||||||||| Sbjct: 56314 aaatgtactctctgtgtttcaaaata 56339
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataa 194 |||||| |||||||||||||||||| Sbjct: 90587 gtactccctctgtttcaaaatataa 90611
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 |||||| |||||||||||||||||| Sbjct: 53350 gtactccctctgtttcaaaatataa 53326
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 ||||||||||||||||| ||||||| Sbjct: 94562 gtactctctctgtttcacaatataa 94538
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatat 192 |||||||||||| |||||||||||| Sbjct: 61829 atgtactctctccgtttcaaaatat 61853
>gb|AC145512.33| Medicago truncatula clone mth2-19o18, complete sequence Length = 145524 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaata 191 ||||||||||||||||||||| Sbjct: 131205 tactctctctgtttcaaaata 131185
>gb|AC153002.15| Medicago truncatula clone mth2-95m8, complete sequence Length = 112714 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaata 191 ||||||||||||||||||||| Sbjct: 38118 tactctctctgtttcaaaata 38098
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 atgtactctctctgtttcaaaatat 192 |||||||| |||||||||||||||| Sbjct: 36831 atgtactccctctgtttcaaaatat 36807
>emb|CR936323.2| Medicago truncatula chromosome 5 clone mth2-155c8, COMPLETE SEQUENCE Length = 136527 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 tgtttcaaaatataaaccttt 200 ||||||||||||||||||||| Sbjct: 15583 tgtttcaaaatataaaccttt 15603
>gb|AC108063.3| Homo sapiens BAC clone RP11-452J21 from 4, complete sequence Length = 160582 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tctctgtttcaaaatataaac 196 ||||||||||||||||||||| Sbjct: 68334 tctctgtttcaaaatataaac 68354
>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome Length = 146454 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ctgtttcaaaatataaacctt 199 ||||||||||||||||||||| Sbjct: 85603 ctgtttcaaaatataaacctt 85623
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaatat 192 |||||||||||| |||||||||||| Sbjct: 24874944 atgtactctctccgtttcaaaatat 24874968 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 ||||||||||||||||| ||||||| Sbjct: 21377240 gtactctctctgtttcacaatataa 21377216 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 28878813 tactctctctgtttcacaatataa 28878790 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||||||||||||| |||| Sbjct: 1333296 tactctctctgtttcaaaacataa 1333273
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 atgtactctctctgtttcaaaatataaac 196 ||||||| ||||| ||||||||||||||| Sbjct: 33517963 atgtactatctctatttcaaaatataaac 33517935 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaat 190 ||||||||||||||||||||| Sbjct: 29026538 gtactctctctgtttcaaaat 29026558 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 34880154 tactctctctgtttcaaaat 34880135 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 19440375 tactctctctgtttcaaaat 19440394
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataa 194 ||||||||||||| ||||||||||| Sbjct: 108179 gtactctctctgtctcaaaatataa 108203 Score = 40.1 bits (20), Expect = 2.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataaacctttt 201 |||||| |||||||| ||||||||||| |||| Sbjct: 108428 gtactccctctgttttaaaatataaacatttt 108397
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataa 194 ||||||||||||| ||||||||||| Sbjct: 188976 gtactctctctgtctcaaaatataa 189000 Score = 40.1 bits (20), Expect = 2.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataaacctttt 201 |||||| |||||||| ||||||||||| |||| Sbjct: 189225 gtactccctctgttttaaaatataaacatttt 189194
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 42.1 bits (21), Expect = 0.71 Identities = 30/33 (90%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataaaccttttag 203 ||||| ||| |||||||||||||||| |||||| Sbjct: 84621 tactccctccgtttcaaaatataaacattttag 84653
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataaa 195 ||||||||| ||||||||||||||| Sbjct: 59490 tactctctccgtttcaaaatataaa 59466
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 atgtactctctctgtttcaaaatataaac 196 ||||||| ||||| ||||||||||||||| Sbjct: 92838 atgtactatctctatttcaaaatataaac 92810
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaat 190 ||||||||||||||||||||| Sbjct: 72703 gtactctctctgtttcaaaat 72723
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaat 190 ||||||||||||||||||||| Sbjct: 109596 gtactctctctgtttcaaaat 109616
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatataa 194 |||||| |||||||||||||||||| Sbjct: 81107 gtactccctctgtttcaaaatataa 81083
>ref|NM_103063.3| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT1G33360 mRNA, complete cds Length = 2441 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaata 191 |||||||||||||||||||| Sbjct: 2400 actctctctgtttcaaaata 2419
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||||||||||||| |||| Sbjct: 128109 tactctctctgtttcaaaacataa 128086
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 181307 tactctctctgttttaaaatataa 181284
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 33106 tactctctctgtttcacaatataa 33083
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgtactctctctgtttcaaaatat 192 ||||||| |||||||||||||||| Sbjct: 24451 tgtactccctctgtttcaaaatat 24474
>emb|X13927.2|TAGLB11B Triticum aestivum Glu-B1-1b gene for HMW glutenin subunit Length = 20425 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 14630 tactctctctgttttaaaatataa 14607
>gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone CL034867.1 R2R3-MYB gene region Length = 49192 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||| ||||||||||||| Sbjct: 10695 tactctctctatttcaaaatataa 10718
>gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL026180.5 R2R3-MYB gene region Length = 24910 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||| ||||||||||| Sbjct: 22141 tactctctctgtctcaaaatataa 22164
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 48267 tactctctctgttttaaaatataa 48244
>gb|AC122160.21| Medicago truncatula clone mth2-23d6, complete sequence Length = 125105 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 aaatgtactctctctgtttcaaaatata 193 |||| ||||||||| ||||||||||||| Sbjct: 43229 aaatatactctctccgtttcaaaatata 43256
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence Length = 157296 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 ||||||| |||||||||||||||| Sbjct: 104868 tactctcactgtttcaaaatataa 104891
>gb|AC146793.7| Medicago truncatula clone mth2-10p9, complete sequence Length = 115521 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||| |||||||||||||| Sbjct: 78046 tactctctccgtttcaaaatataa 78069
>gb|AC152068.17| Medicago truncatula clone mth2-29p8, complete sequence Length = 118589 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 aaatgtactctctctgtttcaaaatata 193 |||| ||||||||| ||||||||||||| Sbjct: 16072 aaatatactctctccgtttcaaaatata 16045
>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence Length = 95710 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 ||||| |||||||||||||||||| Sbjct: 81546 tactccctctgtttcaaaatataa 81569
>gb|AC144513.22| Medicago truncatula clone mth2-15d23, complete sequence Length = 112032 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 40769 tactctctctgttttaaaatataa 40792
>gb|AC126009.22| Medicago truncatula clone mth2-15c20, complete sequence Length = 118705 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||| |||||||||||||| Sbjct: 75296 tactctctccgtttcaaaatataa 75273
>gb|AC137822.30| Medicago truncatula clone mth2-31e20, complete sequence Length = 140561 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||| |||||||||||||| Sbjct: 59826 tactctctccgtttcaaaatataa 59803
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgtttcaaaatataaacct 198 |||||||||||||||||||| Sbjct: 445686 ctgtttcaaaatataaacct 445667
>gb|DQ119142.1| Triticum aestivum HMW glutenin x-type subunit Bx7 precursor (Glu-B1al) gene, complete cds Length = 4392 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 429 tactctctctgttttaaaatataa 406
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||| ||||||||||||||||||| Sbjct: 128044 tactttctctgtttcaaaatataa 128021
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||| ||||||||||||||||||| Sbjct: 28261 tactttctctgtttcaaaatataa 28238
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 42691 tactctctctgtttcacaatataa 42714
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 actctctctgtttcaaaatataaa 195 |||| ||||||||||||||||||| Sbjct: 37204 actccctctgtttcaaaatataaa 37181
>emb|BX784034.8| Zebrafish DNA sequence from clone CH211-194O4 in linkage group 20, complete sequence Length = 187846 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 caaaatataaaccttttaga 204 |||||||||||||||||||| Sbjct: 77248 caaaatataaaccttttaga 77267
>gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete sequence Length = 119507 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 aaatgtactctctctgtttcaaaatata 193 |||| ||||||||| ||||||||||||| Sbjct: 25489 aaatatactctctccgtttcaaaatata 25516
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 86868 tactctctctgtttgaaaatataa 86845
>gb|AY785888.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF10B (CBF10B) mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 2.8 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa-accttttagagattt 209 ||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 907 tactccctctgttctaaaatataagaccttttagagattt 946
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||||||| ||||||||| Sbjct: 4231 gtactctctctgttccaaaatata 4254
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgtactctctctgtttcaaaatat 192 ||||||| |||||||||||||||| Sbjct: 144607 tgtactccctctgtttcaaaatat 144630
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgtactctctctgtttcaaaatat 192 ||||||| |||||||||||||||| Sbjct: 144607 tgtactccctctgtttcaaaatat 144630
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 25570 tactctctctgtttcaaaat 25589
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||| ||||||||||||||||||| Sbjct: 13914381 tactttctctgtttcaaaatataa 13914358 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||| ||||||||||||||||||| Sbjct: 6442567 tactatctctgtttcaaaatataa 6442544
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 18464002 tactctctctgtttcacaatataa 18463979 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 12833982 tactctctctgtttgaaaatataa 12834005
>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete sequence Length = 81609 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaata 191 |||||||||||||||||||| Sbjct: 72529 actctctctgtttcaaaata 72548
>gb|AC051630.4|AC051630 Arabidopsis thaliana chromosome 1 BAC F10C21 genomic sequence, complete sequence Length = 97242 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 actctctctgtttcaaaata 191 |||||||||||||||||||| Sbjct: 19742 actctctctgtttcaaaata 19761
>gb|AC023509.42| Homo sapiens 12 BAC RP11-793H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172558 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ctctgtttcaaaatataaac 196 |||||||||||||||||||| Sbjct: 58403 ctctgtttcaaaatataaac 58384
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aatgtactctctctgtttca 186 |||||||||||||||||||| Sbjct: 9992 aatgtactctctctgtttca 9973
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||| ||||||||||||| Sbjct: 162220 gtactctctccgtttcaaaatata 162197
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||||||| ||||||||| Sbjct: 10782 gtactctctctgttccaaaatata 10759
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||| ||||||||||| Sbjct: 148535 tactctctctgtctcaaaatataa 148558
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||| ||||||||||||| Sbjct: 5281 tactctctctatttcaaaatataa 5258
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||| ||||||||||| Sbjct: 8123 tactctctctgtctcaaaatataa 8146
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||| ||||||||||||||| Sbjct: 123609 tactctctttgtttcaaaatataa 123586
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gtactctctctgtttcaaaatata 193 |||||||||| ||||||||||||| Sbjct: 32163 gtactctctccgtttcaaaatata 32140
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 73873 tactctctctgtttcagaatataa 73850
>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0469E09 Length = 146081 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||||||| |||||||||| Sbjct: 112183 tactctctctgttccaaaatataa 112160
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 57902 tactctctctgtttcaaaat 57921
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 80940 tactctctctgtttcacaatataa 80963
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aatgtactctctctgtttca 186 |||||||||||||||||||| Sbjct: 94987 aatgtactctctctgtttca 94968
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctctgtttcaaaatataaa 195 |||||||||||||||||||| Sbjct: 16241 tctctgtttcaaaatataaa 16260
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctctgtttcaaaatataaa 195 |||||||||||||||||||| Sbjct: 147647 tctctgtttcaaaatataaa 147666
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 atgtactctctctgtttcaaaata 191 |||||||| ||||||||||||||| Sbjct: 92770 atgtactccctctgtttcaaaata 92793
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 94990 tactctctctgtttcataatataa 94967
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 125866 tactctctctgtttcaaaat 125885
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 101749 tactctctctgtttcaaaat 101730
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 39651 tactctctctgtttcaaaat 39632
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 40.1 bits (20), Expect = 2.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataaaccttttagag 205 |||||| ||||||| ||||||||||| |||||||| Sbjct: 74582 gtactccctctgttccaaaatataaaaattttagag 74617
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 2.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatataaaccttttagag 205 |||||| ||||||| ||||||||||| |||||||| Sbjct: 167186 gtactccctctgttccaaaatataaaaattttagag 167221
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaat 190 |||||||||||||||||||| Sbjct: 147948 tactctctctgtttcaaaat 147967
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtactctctctgtttcaaaatata 193 ||||||||||||| |||||||||| Sbjct: 125311 gtactctctctgtctcaaaatata 125334
>emb|BX004766.9| Zebrafish DNA sequence from clone DKEY-5P1 in linkage group 20, complete sequence Length = 214782 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 caaaatataaaccttttaga 204 |||||||||||||||||||| Sbjct: 172159 caaaatataaaccttttaga 172140
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 ||||||||||||| |||||||||| Sbjct: 1805 tactctctctgttccaaaatataa 1828
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 18474055 tactctctctgtttcacaatataa 18474032 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||| ||||||||| Sbjct: 12841322 tactctctctgtttgaaaatataa 12841345
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||| ||||||||||||||||||| Sbjct: 104716 tactatctctgtttcaaaatataa 104693
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||||||| ||||||| Sbjct: 133158 tactctctctgtttcagaatataa 133135
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 tactctctctgtttcaaaatataa 194 |||||||||||| ||||||||||| Sbjct: 23455 tactctctctgtctcaaaatataa 23478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,847,999 Number of Sequences: 3902068 Number of extensions: 1847999 Number of successful extensions: 149056 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 146213 Number of HSP's gapped (non-prelim): 2844 length of query: 220 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 198 effective length of database: 17,147,199,772 effective search space: 3395145554856 effective search space used: 3395145554856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
