ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal0g07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1102 bits (556), Expect = 0.0 Identities = 582/587 (99%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119992 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119991 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 119932 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119931 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119872 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119812 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119752 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119751 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119692 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119632 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119572 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119571 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119514 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119513 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119467 Score = 1102 bits (556), Expect = 0.0 Identities = 582/587 (99%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 94902 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94903 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 94962 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94963 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95022 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95082 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95083 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95142 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95143 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95202 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95203 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95262 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95263 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95322 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95323 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95380 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95427
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 903 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 902 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 843 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 783 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 723 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 663 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 662 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 603 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 543 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 482 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 425 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 378
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 44817 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44816 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 44757 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44756 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 44697 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 44637 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44636 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 44577 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44576 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 44517 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44516 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 44457 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44456 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 44397 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44396 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 44339 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44338 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 44292 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 20301 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20302 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 20361 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20362 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 20421 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20422 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 20481 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20482 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 20541 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20542 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 20601 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 20661 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20662 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 20721 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20722 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 20779 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20780 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 20826
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1446 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1445 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1386 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1326 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1266 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 1206 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1205 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 1146 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 1086 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 1026 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1025 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 968 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 921
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 123656 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123655 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123596 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123536 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123476 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123416 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123415 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 123356 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123355 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 123296 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123295 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 123236 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123235 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 123178 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123177 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123131 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99181 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99182 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99241 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99242 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99301 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99302 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 99361 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99362 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 99421 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99422 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 99481 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99482 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 99541 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99542 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 99601 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99602 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 99659 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99660 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99706
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 124373 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124372 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 124313 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124312 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 124253 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124252 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 124193 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124192 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 124133 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124132 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 124073 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124072 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 124013 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124012 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 123953 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123952 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 123895 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123894 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123848 Score = 1094 bits (552), Expect = 0.0 Identities = 581/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99858 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99859 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99918 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99919 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99978 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99979 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 100038 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 100098 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100099 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 100158 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100159 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 100218 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100219 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 100278 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100279 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 100336 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100337 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 100383
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118773 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118772 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 118713 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 118653 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 118593 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 118533 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118532 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 118473 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118472 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 118413 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118412 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 118353 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118352 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 118295 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118294 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 118248
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119437 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119436 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119379 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95719 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95720 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95777 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119437 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119436 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119379 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95719 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95720 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95777 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119806 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119805 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119746 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119745 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119686 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119626 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119625 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119566 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119565 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119506 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119505 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119446 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119445 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119386 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119385 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119328 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119327 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119281 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95244 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95245 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95304 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95305 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95364 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95365 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95424 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95425 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95484 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95485 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95544 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95545 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95604 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95605 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95664 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95665 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95722 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95723 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95769
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31507877 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31507878 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31507937 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507938 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31507997 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507998 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31508057 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508058 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31508117 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31508118 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31508177 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508178 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31508237 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508238 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 31508297 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31508298 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 31508355 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508356 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31508402
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 84719 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84718 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 84659 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84658 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 84599 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84598 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 84539 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84538 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 84479 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84478 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 84419 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 84359 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84358 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 84299 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 84298 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 84241 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84240 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 84194
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119826 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119766 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119706 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119705 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119646 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119645 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119586 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119585 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119526 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119525 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119466 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119465 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119406 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119405 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119348 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119301 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95292 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95293 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95352 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95412 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95472 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95532 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95533 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95592 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95652 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95712 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95713 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95770 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95771 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95817
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 122341 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122342 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 122401 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122402 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 122461 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122462 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 122521 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122522 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 122581 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122582 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 122641 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122642 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 122701 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122702 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 122761 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122762 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 122819 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 122866 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 14066 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14067 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 14126 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14127 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 14186 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14187 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 14246 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14247 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 14306 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14307 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 14366 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14367 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 14426 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14427 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 14486 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14487 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 14544 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14545 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 14591
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 58545 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58544 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 58485 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58484 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 58425 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58424 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 58365 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58364 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 58305 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58304 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 58245 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58244 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 58185 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58184 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 58125 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58124 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 58067 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58066 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 58020
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9268226 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268227 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9268286 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268287 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9268346 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268347 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9268406 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268407 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9268466 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268467 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9268526 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268527 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9268586 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268587 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9268646 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9268647 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9268704 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268705 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9268751 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9227726 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227727 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9227786 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227787 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9227846 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227847 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9227906 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227907 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9227966 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227967 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9228026 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228027 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9228086 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228087 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9228146 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9228147 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9228204 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9228251 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9164315 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164316 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9164375 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164376 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9164435 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164436 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9164495 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164496 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9164555 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164556 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9164615 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164616 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9164675 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164676 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9164735 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9164736 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9164793 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164794 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9164840 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9056140 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056141 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9056200 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056201 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9056260 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056261 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9056320 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056321 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9056380 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056381 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9056440 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056441 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 9056500 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056501 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9056560 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9056561 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9056618 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056619 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9056665 Score = 149 bits (75), Expect = 1e-32 Identities = 100/107 (93%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtag 502 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||| ||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtggg-tag 25171455 Query: 503 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171454 tgaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19938211 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938212 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19938271 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938272 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19938331 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938332 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19938391 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938392 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19938451 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938452 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19938511 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938512 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19938571 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938572 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 19938631 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19938632 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 19938689 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938690 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19938736 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10277220 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10277219 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10277160 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277159 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10277100 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277099 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10277040 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10276980 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10276979 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10276920 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276919 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10276860 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276859 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 10276800 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10276799 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10276742 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276741 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10276695 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10387078 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387079 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10387138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10387198 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10387258 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10387318 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10387378 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10387438 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10387439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 10387498 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10387499 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10387556 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10387603 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 461 agtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 286 ttgtgctgctaggcgaagcggttgagtgc 314 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31598393 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598394 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31598453 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598454 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31598513 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598514 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31598573 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598574 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31598633 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598634 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31598693 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598694 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31598753 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598754 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 31598813 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31598814 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 31598871 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598872 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31598918
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 33525709 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525710 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 33525769 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525770 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 33525829 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525830 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 33525889 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525890 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 33525949 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525950 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 33526009 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526010 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 33526069 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526070 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 33526129 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 33526130 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 33526187 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526188 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 33526234 Score = 218 bits (110), Expect = 2e-53 Identities = 130/134 (97%), Gaps = 2/134 (1%) Strand = Plus / Minus Query: 465 ccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtg 524 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtggg-taatgaaatagaacgtgaaaccgtg 16678043 Query: 525 ctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaat 584 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16678042 ctgagctcccaaccagtgggagggg-aaagtgatctctgaccgcgtgcctgttgaagaat 16677984 Query: 585 gagccggcgactca 598 |||||||||||||| Sbjct: 16677983 gagccggcgactca 16677970 Score = 174 bits (88), Expect = 2e-40 Identities = 108/112 (96%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 479 tgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 538 ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctag-ggggtagtgaaatagaacgtgaaacagtgctgagctcccaagc 32744714 Query: 539 agtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 590 ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744713 agtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttc 69 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196 Score = 48.1 bits (24), Expect = 0.033 Identities = 37/40 (92%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 472 ggaaaggtgaaaagaacccccagtggggtagtgaaataga 511 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagt-aggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 47832 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47831 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 47772 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47771 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 47712 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47711 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 47652 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 47592 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47591 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 47532 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47531 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 47472 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47471 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 47412 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 47411 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 47354 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47353 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 47307
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 70906 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 70907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 70966 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 71026 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71027 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 71086 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 71146 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 71147 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 71206 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71207 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 71266 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71267 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 71326 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71327 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 71384 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71385 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 71431 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 378 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 499 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 556 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 603
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 135 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 195 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 255 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 315 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 316 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 375 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 435 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 495 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 496 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 553 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 600
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19949487 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949488 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19949547 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949548 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19949607 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949608 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19949667 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949668 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19949727 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949728 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19949787 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949788 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19949847 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949848 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 19949907 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19949908 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 19949965 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949966 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19950012 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10283259 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283258 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10283199 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283198 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10283139 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283138 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10283079 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283078 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10283019 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283018 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10282959 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282958 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10282899 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282898 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 10282839 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10282838 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10282781 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282780 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10282734 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10393117 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393118 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10393177 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393178 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10393237 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393238 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10393297 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393298 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10393357 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393358 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10393417 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10393477 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10393478 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 10393537 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10393538 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10393595 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393596 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10393642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 286 ttgtgctgctaggcgaagcggttgagtgc 314 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119800 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119799 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119740 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119680 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119620 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119560 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119559 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119500 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119440 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119380 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119379 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119322 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119321 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119275 Score = 1086 bits (548), Expect = 0.0 Identities = 580/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95239 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95240 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95299 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95300 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95359 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95419 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95479 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95480 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95539 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95540 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95599 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95659 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95660 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95717 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95718 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95764
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 140874 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140875 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 140934 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140935 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140994 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140995 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141054 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 141114 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141115 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 141174 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141175 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 141234 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141235 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 141294 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141295 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 141352 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141353 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141399
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 93470 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93471 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 93530 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93531 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 93590 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 93650 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 93710 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93711 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 93770 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93771 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 93830 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 93831 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 93890 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93891 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 93948 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93949 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 93995
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1078 bits (544), Expect = 0.0 Identities = 579/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 27534 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27535 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 27594 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 27654 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27655 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 27714 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27715 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 27774 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27775 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 27834 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27835 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 27894 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27895 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 27954 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27955 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 28012 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28013 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 28059
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1070 bits (540), Expect = 0.0 Identities = 578/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9242055 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9242054 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9241995 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241994 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9241935 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241934 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 9241875 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241874 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9241815 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241814 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9241755 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241754 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9241695 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241694 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9241635 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9241634 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9241577 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241576 aagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 9241530 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 168 actgaaacatcttagtagccagaggaaaagaaag 201 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1070 bits (540), Expect = 0.0 Identities = 578/587 (98%), Gaps = 3/587 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 53268 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53267 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 53208 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53207 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 53148 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53147 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 53088 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 53028 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53027 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 52968 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52967 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 52908 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52907 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 52848 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 52847 cagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 52790 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52789 aagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 52743
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1051 bits (530), Expect = 0.0 Identities = 556/562 (98%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 37 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 96 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 97 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 156 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 277 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 337 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 396 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 397 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 457 aagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtg 516 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaatagaacgtg 479 Query: 517 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 576 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 480 aaaccgtgctgagctcccaagcagtggga-ggggaaattgatctctgaccgcgtgcctgt 538 Query: 577 tgaagaatgagccggcgactca 598 |||||||||||||||||||||| Sbjct: 539 tgaagaatgagccggcgactca 560
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1033 bits (521), Expect = 0.0 Identities = 576/588 (97%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 123596 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123595 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123536 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123476 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123416 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123415 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 123356 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 123355 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 123297 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 123237 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123236 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 123177 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123176 ccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggg 123119 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123118 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123071 Score = 1033 bits (521), Expect = 0.0 Identities = 576/588 (97%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 99141 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99142 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99201 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99202 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99261 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99262 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99321 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99322 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 99381 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 99382 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 99440 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99441 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 99500 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99501 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 99560 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99561 ccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggg 99618 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99619 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99666
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1033 bits (521), Expect = 0.0 Identities = 576/588 (97%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 5494 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5495 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 5554 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5555 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 5614 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 5674 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 5734 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 5735 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 5793 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5794 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 5853 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5854 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 5913 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5914 ccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggg 5971 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5972 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 6019
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1033 bits (521), Expect = 0.0 Identities = 576/588 (97%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 82 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 83 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 142 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 202 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 262 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 322 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 323 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 381 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 441 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 501 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 502 ccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggg 559 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 607
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 967 bits (488), Expect = 0.0 Identities = 508/512 (99%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 87 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 146 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 147 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 267 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 327 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 386 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 387 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 447 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaa 506 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaa 419 Query: 507 atagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacc 566 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgacc 478 Query: 567 gcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||| Sbjct: 479 gcgtgcctgttgaagaatgagccggcgactca 510
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 952 bits (480), Expect = 0.0 Identities = 503/508 (99%), Gaps = 2/508 (0%) Strand = Plus / Plus Query: 91 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 150 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 271 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 331 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 390 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 391 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 451 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatag 510 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaatag 419 Query: 511 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 570 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 420 aacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgt 478 Query: 571 gcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||| Sbjct: 479 gcctgttgaagaatgagccggcgactca 506
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 926 bits (467), Expect = 0.0 Identities = 492/498 (98%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 80 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 259 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 319 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 320 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 379 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 492 cagtggggtagtgaaata 509 |||| ||||||||||||| Sbjct: 500 cagt-gggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 139506 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139505 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 139447 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139446 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139387 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139386 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139327 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 139326 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 139267 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 139266 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 139207 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139206 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139147 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139146 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139087 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 139086 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 139032 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139031 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 138985 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 110439 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 110440 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 110498 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110499 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 110558 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110559 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 110618 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 110619 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 110678 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 110679 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 110738 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110739 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110798 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110799 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 110858 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 110859 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 110913 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110914 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 110960
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 127784 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 127783 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 127725 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127724 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 127665 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127664 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 127605 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 127604 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 127545 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 127544 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 127485 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127484 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 127425 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127424 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 127365 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 127364 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 127310 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127309 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 127263 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 107138 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 107139 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 107197 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107198 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 107257 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107258 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 107317 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 107318 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 107377 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 107378 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 107437 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107438 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 107497 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107498 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107557 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 107558 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 107612 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107613 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 107659
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 134143 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134142 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134084 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134083 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134024 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133964 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133963 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 133904 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 133903 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 133844 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133843 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133784 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133783 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 133724 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 133723 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 133669 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133668 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 133622 Score = 924 bits (466), Expect = 0.0 Identities = 561/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 103828 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 103829 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 103887 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103888 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103947 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103948 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104007 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104008 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 104067 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 104068 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 104127 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104128 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104187 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104188 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 104247 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 104248 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 104302 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 104349
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 908 bits (458), Expect = 0.0 Identities = 559/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 142028 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 142027 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 141969 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141968 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 141909 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141908 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141849 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141848 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 141789 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 141788 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 141729 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 141728 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 141669 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141668 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 141609 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 141608 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 141554 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141553 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141507 Score = 908 bits (458), Expect = 0.0 Identities = 559/587 (95%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111629 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 111630 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 111688 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111689 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 111748 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111749 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 111808 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111809 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 111868 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 111869 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 111928 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111929 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 111988 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111989 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 112048 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 112049 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 112103 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112104 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 112150
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 902 bits (455), Expect = 0.0 Identities = 472/475 (99%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 124 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 184 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 244 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 304 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 484 agaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 543 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419 Query: 544 gagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 ga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 473
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 900 bits (454), Expect = 0.0 Identities = 557/587 (94%), Gaps = 11/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 134901 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134900 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134842 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134782 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 134722 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 134721 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 134662 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 134661 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 134602 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134601 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 134542 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134541 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 134482 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134481 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg---- 134430 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134429 -agaaatctctgaccgcgtgcctgttgaagaatgagccggcgactca 134384 Score = 900 bits (454), Expect = 0.0 Identities = 557/587 (94%), Gaps = 11/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105381 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 105382 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 105440 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105441 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105500 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105501 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105560 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 105561 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 105620 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 105621 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 105680 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105681 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105740 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105741 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 105800 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105801 ca-tcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg---- 105852 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105853 -agaaatctctgaccgcgtgcctgttgaagaatgagccggcgactca 105898
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 896 bits (452), Expect = 0.0 Identities = 557/587 (94%), Gaps = 9/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136511 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136510 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 136452 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136392 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136332 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 136331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 136272 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 136271 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 136212 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136211 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 136152 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136151 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 136092 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136091 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 136036 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 136035 a---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135992 Score = 896 bits (452), Expect = 0.0 Identities = 557/587 (94%), Gaps = 9/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105914 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 105915 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 105973 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105974 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106033 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106034 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106093 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106094 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 106153 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106154 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106213 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106273 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106274 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106333 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106334 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106389 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106390 a---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106433
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132695 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132694 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132636 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132635 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132576 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132516 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132515 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132456 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132455 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132396 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132395 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132336 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132335 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132276 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132275 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132220 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 132219 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 132175 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104183 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104184 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104242 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104243 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104302 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104362 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104363 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104422 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104423 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104482 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104483 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104542 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104543 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104602 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104603 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104658 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 104659 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 104703
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132918 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 132917 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 132859 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132858 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132799 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132798 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132739 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 132738 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 132679 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132678 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 132619 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132618 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132559 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132558 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132499 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132498 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 132445 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 132444 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132398 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103846 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 103847 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 103905 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103965 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103966 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104025 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 104026 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 104085 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104086 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 104145 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104146 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104205 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104206 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104265 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104266 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 104319 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 104320 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104366
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132688 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132687 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132629 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132628 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132569 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132568 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132509 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132508 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132449 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132448 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132389 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132329 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132328 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132269 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132268 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132213 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 132212 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 132168 Score = 886 bits (447), Expect = 0.0 Identities = 556/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104181 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104182 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104240 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104300 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104360 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104361 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104420 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104421 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104480 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104481 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104540 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104541 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104600 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104601 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104656 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 104657 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 104701
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 878 bits (443), Expect = 0.0 Identities = 555/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131587 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 131586 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 131528 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131527 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131468 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131408 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131407 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 131348 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 131347 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 131288 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131287 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131228 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131227 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 131168 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131167 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 131112 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 131111 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 131067 Score = 878 bits (443), Expect = 0.0 Identities = 555/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103048 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 103049 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 103107 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103108 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103167 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103168 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103227 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103228 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 103287 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 103288 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 103347 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103348 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 103407 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 103408 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 103467 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103468 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 103523 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 103524 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 103568
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 878 bits (443), Expect = 0.0 Identities = 555/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 133879 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 133878 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 133820 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133819 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 133760 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133759 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133700 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 133699 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 133640 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 133639 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 133580 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133579 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133520 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133519 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 133460 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133459 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 133406 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 133405 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 133359 Score = 878 bits (443), Expect = 0.0 Identities = 555/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104770 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 104771 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 104829 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104830 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104889 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104890 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104949 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 104950 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 105009 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 105010 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 105069 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105070 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105129 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105130 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 105189 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105190 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 105243 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 105244 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 105290
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 870 bits (439), Expect = 0.0 Identities = 554/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 140280 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 140279 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 140221 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140220 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140161 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140160 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 140101 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140100 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 140041 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 140040 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 139981 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139980 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139921 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139920 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 139861 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 139860 ca-tcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-- 139807 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 139806 acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 139760 Score = 870 bits (439), Expect = 0.0 Identities = 554/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109780 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109781 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 109839 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109840 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109899 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109900 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109959 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109960 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 110019 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 110020 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 110079 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110080 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110139 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110140 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 110199 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 110200 ca-tcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-- 110253 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 110254 acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 110300
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 870 bits (439), Expect = 0.0 Identities = 554/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 80 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 259 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 318 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 319 tgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgac 378 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 498 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 499 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 552 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 553 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 599
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 870 bits (439), Expect = 0.0 Identities = 554/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 508 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 563 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 564 cgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 608
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 854 bits (431), Expect = 0.0 Identities = 552/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139424 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139423 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139365 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139364 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 139305 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139304 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139245 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 139244 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 139185 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 139184 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 139125 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139124 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139065 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139064 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 139005 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 | || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139004 c-gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 138949 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 138948 caggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 138904 Score = 854 bits (431), Expect = 0.0 Identities = 552/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109673 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109674 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109732 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109733 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 109792 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109793 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109852 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 109853 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 109912 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 109913 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 109972 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109973 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110032 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110033 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 110092 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 | || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110093 c-gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 110148 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 110149 caggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 110193
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 854 bits (431), Expect = 0.0 Identities = 552/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106085 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106086 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106144 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106145 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106204 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106205 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106264 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106265 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106324 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106325 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106384 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106385 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106444 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 106445 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 106504 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106505 ca-tcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 106558 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106559 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106605 Score = 805 bits (406), Expect = 0.0 Identities = 551/590 (93%), Gaps = 11/590 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 135824 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 135823 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 135765 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135764 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135705 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135645 Query: 252 gtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || || Sbjct: 135644 gtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgga 135585 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctg 369 ||| |||||||||||||| | |||||||||||||||||||||||||||||| | | ||| Sbjct: 135584 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctg 135525 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaag 428 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135524 acccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaag 135465 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 135464 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 135405 Query: 489 ccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 548 ||||| | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| Sbjct: 135404 cccca-tcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggagga 135349 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135348 g--acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 135301
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 854 bits (431), Expect = 0.0 Identities = 552/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136100 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136099 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 136041 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136040 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135981 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135921 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 135920 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 135861 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 135860 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 135801 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135800 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135741 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 135740 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 135681 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135680 ca-tcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 135627 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135626 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 135580 Score = 854 bits (431), Expect = 0.0 Identities = 552/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106307 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106308 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106366 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106367 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106426 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106427 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106486 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106487 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106546 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106547 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106606 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106607 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106666 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 106667 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 106726 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106727 ca-tcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 106780 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106781 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106827
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 852 bits (430), Expect = 0.0 Identities = 555/590 (94%), Gaps = 9/590 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 taccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgac 46631 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 46691 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46692 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 46751 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggg 550 || | ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || Sbjct: 46752 ca-tcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaggc 46807 Query: 551 aaagtg--atctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 46808 gccgtggaagctctgaccgcgtgcctgttgaagaatgagccggcgactca 46857
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136220 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136219 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136161 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136101 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136100 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136041 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136040 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135981 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135921 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135920 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135861 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135860 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135801 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135800 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135745 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135744 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135700 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106410 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106411 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106469 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106470 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106529 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106589 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106590 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106649 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106650 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106709 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106710 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106769 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106770 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106829 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106830 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106885 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106886 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106930
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136858 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136857 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136799 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136798 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136739 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136738 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136679 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 136678 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 136619 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 136618 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 136559 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136558 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 136499 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136498 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 136439 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136438 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 136383 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 136382 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 136338 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106699 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106700 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106758 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106759 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106818 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106819 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106878 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 106879 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 106938 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106939 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106998 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106999 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 107058 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107059 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 107118 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 107119 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 107174 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 107175 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 107219
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 1604 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1605 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1663 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1664 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1723 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1783 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 1784 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 1843 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 1903 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1904 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 1963 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1964 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 2023 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2024 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 2079 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 2080 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 2124
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135466 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135465 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135407 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135347 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135346 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135287 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135286 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135227 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135226 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135167 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135107 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135106 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135047 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135046 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 134991 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 134990 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 134946 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105570 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105571 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105629 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105630 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105689 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105749 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105750 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105809 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105810 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105869 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105929 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105930 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 105989 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105990 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106045 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106046 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106090
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135601 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135600 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135542 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135482 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135481 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135422 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135421 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135362 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135361 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135302 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135301 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135242 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135241 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135182 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135181 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135126 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135125 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135081 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105742 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105743 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105801 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105802 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105861 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105921 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105922 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105981 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105982 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106041 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106101 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106102 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106161 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106162 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106217 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106218 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106262
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135599 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135598 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135540 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135539 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135480 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135479 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135420 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135419 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135360 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135359 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135300 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135299 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135240 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135239 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135180 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135179 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135124 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135123 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135079 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105739 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105740 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105798 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105799 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105858 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105918 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105919 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105978 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105979 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106038 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106098 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106099 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106158 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106159 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106214 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106215 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106259
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135511 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135510 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135452 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135392 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135332 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135272 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135271 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135212 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135211 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135152 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135151 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135092 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135091 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135036 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135035 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 134991 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105617 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105618 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105676 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105677 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105736 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105737 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105796 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105797 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105856 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105857 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105916 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105917 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105976 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105977 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106036 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106037 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106092 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106093 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106137
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136218 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136217 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136159 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136158 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136099 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136098 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136039 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136038 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135979 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135978 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135919 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135918 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135859 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135858 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135799 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135798 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135743 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135742 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135698 Score = 850 bits (429), Expect = 0.0 Identities = 553/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106408 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106409 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106467 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106527 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106528 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106587 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106588 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106647 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106648 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106707 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106708 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106767 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106768 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106827 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106828 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106883 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106884 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106928
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 848 bits (428), Expect = 0.0 Identities = 550/585 (94%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-t 140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 261 gtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgag 320 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct: 321 tcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaac 380 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 440 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 500 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || |||| ||||||||||||| ||||||||| |||||||||||||||||||| | | Sbjct: 501 catcgggg-agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaa 556 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tcg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 848 bits (428), Expect = 0.0 Identities = 553/588 (94%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 80 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 81 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaac 259 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaa 319 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 320 gtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctga 379 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 499 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 500 ccaccgggg-agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 555 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 556 ctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 601
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 846 bits (427), Expect = 0.0 Identities = 551/586 (94%), Gaps = 10/586 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135478 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135477 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135419 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135418 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135359 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135299 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135298 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135239 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135238 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135179 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135178 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135119 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135118 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135059 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135058 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135003 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 135002 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgact 134960 Score = 846 bits (427), Expect = 0.0 Identities = 551/586 (94%), Gaps = 10/586 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105584 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105585 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105643 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105644 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105703 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105763 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105764 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105823 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105824 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105883 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105943 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105944 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106003 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106004 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106059 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 106060 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgact 106102
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 842 bits (425), Expect = 0.0 Identities = 552/588 (93%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135949 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 135948 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 135890 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135889 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135830 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135829 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135770 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135769 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135710 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135709 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135650 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135649 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135590 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135589 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135530 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135529 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135474 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 135429 Score = 842 bits (425), Expect = 0.0 Identities = 552/588 (93%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106189 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 106190 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 106248 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106308 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106309 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106368 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106369 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106428 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106429 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106488 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106548 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106549 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106608 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106609 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106664 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106665 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 106709
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 839 bits (423), Expect = 0.0 Identities = 511/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 130156 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130155 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 130096 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 130095 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 130036 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130035 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 839 bits (423), Expect = 0.0 Identities = 511/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 102300 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102301 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102360 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 102361 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 102420 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102421 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Minus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 129930 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 102526
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 837 bits (422), Expect = 0.0 Identities = 551/587 (93%), Gaps = 8/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 131711 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 131710 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 131652 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131651 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131592 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131532 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 131531 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 131472 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131471 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 131412 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131411 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131352 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131351 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 131292 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 131291 ca-tcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg- 131237 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 131236 accaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 131191 Score = 837 bits (422), Expect = 0.0 Identities = 551/587 (93%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 101734 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 101735 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 101793 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101794 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 101853 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101854 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 101913 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 101914 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 101973 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 102033 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102034 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102093 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102094 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 102153 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 102154 ca-tcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg- 102208 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 102209 accaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 102254
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 833 bits (420), Expect = 0.0 Identities = 552/589 (93%), Gaps = 8/589 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139633 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139632 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139574 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139573 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139514 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139513 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139454 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 139453 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 139394 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 139393 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 139334 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139274 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 139273 taaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139214 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139213 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 139158 Query: 551 aaagt-gatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 139157 ctactaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 139109 Score = 833 bits (420), Expect = 0.0 Identities = 552/589 (93%), Gaps = 8/589 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109666 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109667 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109725 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109726 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109785 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109786 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109845 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 310 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 109846 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 109905 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 109906 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 109965 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109966 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110025 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 110026 taaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110085 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110086 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 110141 Query: 551 aaagt-gatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 110142 ctactaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 110190
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 831 bits (419), Expect = 0.0 Identities = 510/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 508 ca-tcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 831 bits (419), Expect = 0.0 Identities = 510/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 ca-tccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||| ||||||||||||||||||| | ||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactca 620
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 825 bits (416), Expect = 0.0 Identities = 539/575 (93%), Gaps = 8/575 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 369 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 428 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 488 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 489 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 548 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 | || ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 549 c-gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcc 604 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatga 586 || | |||||||||||||||||||||||||||| Sbjct: 605 caggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 823 bits (415), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 ca-tccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatga 586 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 823 bits (415), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 508 ca-tcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccg 590 |||||| |||||||||||| || ||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg 612
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 823 bits (415), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||| ||||||||||||||| ||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactca 619
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 819 bits (413), Expect = 0.0 Identities = 547/584 (93%), Gaps = 11/584 (1%) Strand = Plus / Plus Query: 16 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 75 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 76 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 135 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 136 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 195 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 196 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 256 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 314 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca- 476 Query: 495 tggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 554 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 477 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca-- 531 Query: 555 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 532 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 574
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 817 bits (412), Expect = 0.0 Identities = 418/420 (99%) Strand = Plus / Plus Query: 79 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 138 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 139 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 809 bits (408), Expect = 0.0 Identities = 546/587 (93%), Gaps = 9/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 4550 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4610 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4670 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4671 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4730 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || ||| ||||||||||||| ||||||||| |||||||||||||||||| ||| Sbjct: 4731 t-gtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---gga 4783 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 4784 gctggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 4830
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 809 bits (408), Expect = 0.0 Identities = 546/587 (93%), Gaps = 9/587 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 23375 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23374 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 23315 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23314 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 23255 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23254 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 23195 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || ||| ||||||||||||| ||||||||| |||||||||||||||||| ||| Sbjct: 23194 t-gtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---gga 23142 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 23141 gctggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 23095
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 803 bits (405), Expect = 0.0 Identities = 548/588 (93%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 86342 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| | Sbjct: 86343 ggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-t 86401 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 86461 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86462 gaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaacc 86521 Query: 252 gtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct: 86522 gtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttg 86581 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 86582 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 86641 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86642 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 86701 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86702 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 86761 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 |||| | ||| ||||||||||||| |||||||| | |||||||||||||||||| || Sbjct: 86762 ccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--gg 86815 Query: 550 gaaagt-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86816 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 803 bits (405), Expect = 0.0 Identities = 548/588 (93%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 88428 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| | Sbjct: 88429 ggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-t 88487 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88488 gctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 88547 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88548 gaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 88607 Query: 252 gtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttg 309 ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 88608 gtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttg 88667 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 88668 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 88727 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88728 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 88787 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88788 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 88847 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 |||| | ||| ||||||||||||| |||||||| | |||||||||||||||||| || Sbjct: 88848 ccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--gg 88901 Query: 550 gaaagt-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88902 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 797 bits (402), Expect = 0.0 Identities = 549/590 (93%), Gaps = 10/590 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 72 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 130 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 311 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 131551 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 131492 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131491 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131432 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 131431 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 131372 Query: 489 ccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 548 ||||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 131371 cccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 131316 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 131315 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactca 131267 Score = 797 bits (402), Expect = 0.0 Identities = 549/590 (93%), Gaps = 10/590 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 72 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 130 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 311 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 103843 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 103902 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103903 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103962 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 103963 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 104022 Query: 489 ccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 548 ||||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 104023 cccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 104078 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 104079 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactca 104127
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 795 bits (401), Expect = 0.0 Identities = 543/584 (92%), Gaps = 10/584 (1%) Strand = Plus / Minus Query: 16 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 75 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 76 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 135 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 136 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 195 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 196 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 256 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 314 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca- 142377 Query: 495 tggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 554 | ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | Sbjct: 142376 tcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca-- 142322 Query: 555 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 142321 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 142279 Score = 795 bits (401), Expect = 0.0 Identities = 543/584 (92%), Gaps = 10/584 (1%) Strand = Plus / Plus Query: 16 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 75 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 76 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 135 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 136 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 195 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 196 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 256 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 314 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca- 110951 Query: 495 tggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 554 | ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | Sbjct: 110952 tcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca-- 111006 Query: 555 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 111007 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 111049
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 791 bits (399), Expect = 0.0 Identities = 550/590 (93%), Gaps = 13/590 (2%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || | |||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcgg 1846 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1847 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1905 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagag 1965 Query: 192 gaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 gaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2025 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggtt 308 |||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2026 cgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagccc 2085 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2086 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 2145 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2146 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 2205 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2206 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 2265 Query: 489 ccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 548 ||||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2266 cccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2321 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 gcca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 2368
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 789 bits (398), Expect = 0.0 Identities = 545/588 (92%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 576 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 577 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 635 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 695 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 755 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 756 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 815 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 816 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 875 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 935 Query: 432 aaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 936 aaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaaccc 995 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | ||||| |||||||||||||| | Sbjct: 996 cca-tcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaga 1051 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 cagg----ctctgaccgcgtgcctgttgaagaatgagccggcgactca 1095
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 785 bits (396), Expect = 0.0 Identities = 548/589 (93%), Gaps = 15/589 (2%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 180 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 181 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 239 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccaga 190 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 240 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccaga 299 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 359 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttg 309 |||||||||||| ||||||||||||||||||||||| |||||||||||||||| || | Sbjct: 360 cgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccg 418 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 478 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 479 acccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaagg 538 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 539 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 598 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 || | ||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 599 cca--tcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggag--- 650 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 651 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 697
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 779 bits (393), Expect = 0.0 Identities = 542/587 (92%), Gaps = 10/587 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 508 ca-tcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagac 563 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||| ||||||||||||||| ||||||||||||||||| Sbjct: 564 agg----ctctgaacgcgtgcctgttgaaaaatgagccggcgactca 606
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 779 bits (393), Expect = 0.0 Identities = 485/512 (94%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgt 523 | |||| ||||||||||||| ||||||||| Sbjct: 5000 tggcgggg-agtgaaatagaacatgaaaccgt 5030 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 779 bits (393), Expect = 0.0 Identities = 485/512 (94%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgt 523 | |||| ||||||||||||| ||||||||| Sbjct: 5000 tggcgggg-agtgaaatagaacatgaaaccgt 5030 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 765 bits (386), Expect = 0.0 Identities = 542/586 (92%), Gaps = 10/586 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 116129 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 116128 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 116070 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 116069 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 116010 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 116009 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 115950 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 115949 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 115891 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 115890 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 115831 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 115830 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 115771 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115770 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 115711 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 115710 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 115657 Query: 552 aagtg-atctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || || |||||||||||||||||||||||||||||||||||||||| Sbjct: 115656 aattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 115611 Score = 765 bits (386), Expect = 0.0 Identities = 542/586 (92%), Gaps = 10/586 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 85991 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 85992 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 86050 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86051 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 86110 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 86111 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 86170 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 86171 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 86229 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 86230 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 86289 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 86290 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 86349 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86350 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 86409 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 86410 ca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 86463 Query: 552 aagtg-atctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || || |||||||||||||||||||||||||||||||||||||||| Sbjct: 86464 aattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 86509
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 763 bits (385), Expect = 0.0 Identities = 542/588 (92%), Gaps = 10/588 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 52606 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 52605 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 52547 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52546 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 52487 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52486 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 52427 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 310 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 52426 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 52367 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 52366 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 52307 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52306 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 52247 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 52246 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 52187 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 52186 ccattgggg-agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 52131 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 52130 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 52086 Score = 763 bits (385), Expect = 0.0 Identities = 542/588 (92%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 37222 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 37223 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 37281 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37282 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 37341 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37342 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 37401 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 310 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 37402 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 37461 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 37462 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 37521 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37522 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 37581 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 37582 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 37641 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 37642 ccattgggg-agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 37697 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 37698 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 37742
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 763 bits (385), Expect = 0.0 Identities = 542/588 (92%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 4150 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 4151 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 4209 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4210 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 4269 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4270 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 4329 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 310 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 4330 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 4389 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 4390 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 4449 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4450 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4509 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 4510 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 4569 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4570 ccattgggg-agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 4625 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 4626 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 4670
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 757 bits (382), Expect = 0.0 Identities = 399/402 (99%), Gaps = 2/402 (0%) Strand = Plus / Plus Query: 197 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 257 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 317 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 376 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 377 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 437 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 496 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt- 299 Query: 497 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 556 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 300 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 358 Query: 557 atctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 atctctgaccgcgtgcctgttgaagaatgagccggcgactca 400
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 755 bits (381), Expect = 0.0 Identities = 540/586 (92%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2124 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 2125 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 2183 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 2243 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2244 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 2303 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 2304 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 2363 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 370 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 2364 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 2423 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2424 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 2483 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2484 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 2543 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 2544 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 2598 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 2599 aatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 2644
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 755 bits (381), Expect = 0.0 Identities = 540/586 (92%), Gaps = 8/586 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118069 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 118068 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 118010 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118009 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 117950 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 117949 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 117890 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 117889 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 117830 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 370 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 117829 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 117770 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117769 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 117710 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117709 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 117650 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 117649 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 117595 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 117594 aatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 117549 Score = 755 bits (381), Expect = 0.0 Identities = 540/586 (92%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 90033 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 90034 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 90092 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90093 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 90152 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 90153 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 90212 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 90213 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 90272 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 370 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 90273 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 90332 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 90392 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90393 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 90452 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 90453 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 90507 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 90508 aatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 90553
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 755 bits (381), Expect = 0.0 Identities = 544/593 (91%), Gaps = 13/593 (2%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 128366 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 128365 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 128307 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128306 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 128247 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 128246 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 128187 Query: 252 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 305 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 128186 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 128127 Query: 306 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 365 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 128126 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 128067 Query: 366 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 425 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128066 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 128007 Query: 426 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 485 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 128006 aaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaag 127947 Query: 486 aacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 545 |||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 127946 aacccccatagggg-agtgaaatagaacatgaaaccgta---agctcccaagcagtggga 127891 Query: 546 gggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | | | ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 127890 ggagaattg-gatctctgaccgcatgcctgttgaggaatgagccggcgactca 127839 Score = 755 bits (381), Expect = 0.0 Identities = 544/593 (91%), Gaps = 13/593 (2%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 95081 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 95082 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 95140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 95201 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 95260 Query: 252 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 305 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 95261 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 95320 Query: 306 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 365 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 95321 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 95380 Query: 366 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 425 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 95440 Query: 426 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 485 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 95441 aaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaag 95500 Query: 486 aacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 545 |||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 95501 aacccccatagggg-agtgaaatagaacatgaaaccgta---agctcccaagcagtggga 95556 Query: 546 gggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | | | ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 95557 ggagaattg-gatctctgaccgcatgcctgttgaggaatgagccggcgactca 95608
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 753 bits (380), Expect = 0.0 Identities = 500/536 (93%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 507 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 | ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 508 --atcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggagg 558
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 753 bits (380), Expect = 0.0 Identities = 538/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-t 140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 261 gtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaa 320 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| || Sbjct: 321 tcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaac 380 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 440 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 500 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 501 ca-taggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 555 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 556 atcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 753 bits (380), Expect = 0.0 Identities = 397/400 (99%), Gaps = 2/400 (0%) Strand = Plus / Plus Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gg 299 Query: 499 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 558 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 358 Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 398
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 753 bits (380), Expect = 0.0 Identities = 397/400 (99%), Gaps = 2/400 (0%) Strand = Plus / Plus Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gg 299 Query: 499 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 558 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 358 Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 398
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 751 bits (379), Expect = 0.0 Identities = 396/399 (99%), Gaps = 2/399 (0%) Strand = Plus / Plus Query: 200 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 260 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 320 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 379 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 440 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-ggg 299 Query: 500 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 559 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 358 Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactca 397
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 751 bits (379), Expect = 0.0 Identities = 396/399 (99%), Gaps = 2/399 (0%) Strand = Plus / Plus Query: 200 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 260 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 320 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 379 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 440 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-ggg 302 Query: 500 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 559 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 303 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 361 Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tctgaccgcgtgcctgttgaagaatgagccggcgactca 400
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 747 bits (377), Expect = 0.0 Identities = 394/397 (99%), Gaps = 2/397 (0%) Strand = Plus / Plus Query: 202 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 262 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 322 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 381 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 382 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 442 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggta 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggta 299 Query: 502 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 561 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 300 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 358 Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||| Sbjct: 359 tgaccgcgtgcctgttgaagaatgagccggcgactca 395
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 745 bits (376), Expect = 0.0 Identities = 456/478 (95%), Gaps = 5/478 (1%) Strand = Plus / Plus Query: 15 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 74 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 75 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 134 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 135 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 195 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 314 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 320 tgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccg 379 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 439 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 492 |||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 440 tactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 3970 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 3971 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 4029 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4030 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 4089 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4090 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 4149 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 4150 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 4209 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 4210 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 4269 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4270 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4329 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4330 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 4389 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 4390 ca-tcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 4444 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4445 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 4489
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-t 123 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggag 183 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 184 gaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaacc 243 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||||| Sbjct: 244 gtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgag 303 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| || Sbjct: 304 tcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaac 363 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 423 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || |||| ||||||||||||| ||||||||| |||| ||||||||||||||| | | Sbjct: 484 catcgggg-agtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaa 539 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 tcg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 500 ca-tcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 554 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 151165 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 151164 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 151106 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 151105 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 151046 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 151045 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 150986 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 150985 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 150926 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 150925 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 150866 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150865 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 150806 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150805 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 150746 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 150745 ca-tcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 150691 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150690 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 150646 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 117501 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 117502 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 117560 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 117561 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 117620 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117621 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 117680 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 117681 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 117740 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 117741 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 117800 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117801 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 117860 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117861 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 117920 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 117921 ca-tcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 117975 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117976 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 745 bits (376), Expect = 0.0 Identities = 537/585 (91%), Gaps = 7/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 || | ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 500 ca-tcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 554 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 743 bits (375), Expect = 0.0 Identities = 540/589 (91%), Gaps = 11/589 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 82 ggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-t 140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 141 gctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggag 200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaacc 260 Query: 252 gtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggt 307 ||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| || Sbjct: 261 gtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagt 320 Query: 308 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 ||||| | |||||| |||||| | ||||||||| |||||||||| || | ||||||||| Sbjct: 321 tgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctc 380 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 427 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 taacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 440 Query: 428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 500 Query: 488 cccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 |||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 501 cccccatcgggg-agtgaaatagaacatgaaaccgta---agctcccaagcagtgggagg 556 Query: 548 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaatcg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 604
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 741 bits (374), Expect = 0.0 Identities = 447/469 (95%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 14 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 73 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 74 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 133 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 134 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 193 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 194 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 254 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 313 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 314 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 373 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 ccgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgaccc 358 Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 418 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 482 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 419 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 739 bits (373), Expect = 0.0 Identities = 538/586 (91%), Gaps = 8/586 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 146479 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 146478 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 146420 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146419 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 146360 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146359 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 146300 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 146299 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 146240 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 370 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 146239 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 146180 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 146179 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 146120 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 146119 taaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaaccc 146060 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || || ||| ||||||||||||| |||||||| | ||||||||||||||||| || | Sbjct: 146059 cc-gtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggag 146005 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || |||| |||||||||||||||||||||||||||||||||||| Sbjct: 146004 aatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 145959 Score = 739 bits (373), Expect = 0.0 Identities = 538/586 (91%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111983 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 111984 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 112042 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112043 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 112102 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112103 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 112162 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 112163 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 112222 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 370 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 112223 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 112282 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 112283 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 112342 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112343 taaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaaccc 112402 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || || ||| ||||||||||||| |||||||| | ||||||||||||||||| || | Sbjct: 112403 cc-gtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggag 112457 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112458 aatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 112503
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 731 bits (369), Expect = 0.0 Identities = 544/588 (92%), Gaps = 21/588 (3%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 653 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| || Sbjct: 652 ggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ct 599 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||| |||||||||||||| || |||| ||| |||||||||||||||||| Sbjct: 598 gctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagag 546 Query: 192 gaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 486 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 485 cgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgga 426 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 425 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 366 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 306 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 305 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 246 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 245 cca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 190 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 189 ccgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 144
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 716 bits (361), Expect = 0.0 Identities = 473/505 (93%), Gaps = 9/505 (1%) Strand = Plus / Minus Query: 95 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 154 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 155 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 215 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 275 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 333 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 394 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 454 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaac 513 |||||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaaccccca-tcggggagtgaaatagaac 95 Query: 514 gtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcc 573 |||||||| | |||||||||||||||||||| | | | ||||||||||||||| Sbjct: 94 atgaaaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcc 41 Query: 574 tgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||| Sbjct: 40 tgttgaagaatgagccggcgactca 16
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 88 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 147 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 148 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 208 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 268 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 328 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 387 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 388 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 448 ccgata 453 |||||| Sbjct: 361 ccgata 366
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 702 bits (354), Expect = 0.0 Identities = 444/470 (94%), Gaps = 8/470 (1%) Strand = Plus / Plus Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 308 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 489 ccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 548 ||||| | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 377 cccca-tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gcca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 479
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 123390 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123389 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123330 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123270 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123210 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123209 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123150 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 123149 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 123090 Query: 372 ccgagtagcatggggcacgtggaatc 397 |||||||||||||||||||||||||| Sbjct: 123089 ccgagtagcatggggcacgtggaatc 123064 Score = 377 bits (190), Expect = e-101 Identities = 207/210 (98%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 389 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 122702 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122701 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgc 122643 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||| |||||| Sbjct: 122642 gtgcctgttgaagaatgagccggtgactca 122613
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 12825931 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825930 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 12825871 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825870 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 12825811 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825810 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 12825751 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825750 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 12825691 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 12825690 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 12825631 Query: 372 ccgagtagcatggggcacgtggaatc 397 |||||||||||||||||||||||||| Sbjct: 12825630 ccgagtagcatggggcacgtggaatc 12825605 Score = 377 bits (190), Expect = e-101 Identities = 207/210 (98%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 389 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 12825243 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12825242 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgc 12825184 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||| |||||| Sbjct: 12825183 gtgcctgttgaagaatgagccggtgactca 12825154 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 652 bits (329), Expect = 0.0 Identities = 529/588 (89%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcgg 80 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| | Sbjct: 81 ggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-t 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 200 gaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaacc 259 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 310 | |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || | Sbjct: 260 gcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaa 319 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || |||||||||||||| |||||||||||| | |||||||||||| || ||||||| Sbjct: 320 atgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctga 379 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| || Sbjct: 440 taaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-cc 498 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| ||||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 499 ccattgggg-agtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagc 554 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 599
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 636 bits (321), Expect = e-179 Identities = 374/390 (95%), Gaps = 15/390 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 75180 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 75179 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgc 75129 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||| Sbjct: 75128 gtgcctgttgaagaatgagccggcgactca 75099 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75632 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 75631 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 75572 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75571 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75512 Query: 192 gaaaagaaagcaaaagcgattcccgta 218 ||||||||||||||||||||||||||| Sbjct: 75511 gaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 636 bits (321), Expect = e-179 Identities = 374/390 (95%), Gaps = 15/390 (3%) Strand = Plus / Plus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 382358 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 382359 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgc 382409 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||| Sbjct: 382410 gtgcctgttgaagaatgagccggcgactca 382439 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 381906 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 381966 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 382026 Query: 192 gaaaagaaagcaaaagcgattcccgta 218 ||||||||||||||||||||||||||| Sbjct: 382027 gaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 636 bits (321), Expect = e-179 Identities = 374/390 (95%), Gaps = 15/390 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 113271 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 113270 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgc 113220 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||| Sbjct: 113219 gtgcctgttgaagaatgagccggcgactca 113190 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 113723 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 113722 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 113663 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113662 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 113603 Query: 192 gaaaagaaagcaaaagcgattcccgta 218 ||||||||||||||||||||||||||| Sbjct: 113602 gaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 636 bits (321), Expect = e-179 Identities = 374/390 (95%), Gaps = 15/390 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 367953 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 367952 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgc 367902 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||| Sbjct: 367901 gtgcctgttgaagaatgagccggcgactca 367872 Score = 636 bits (321), Expect = e-179 Identities = 374/390 (95%), Gaps = 15/390 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaat 508 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaat 184558 Query: 509 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 568 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 184557 agaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgc 184507 Query: 569 gtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||| Sbjct: 184506 gtgcctgttgaagaatgagccggcgactca 184477 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 368405 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 368404 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 368345 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368344 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 368285 Query: 192 gaaaagaaagcaaaagcgattcccgta 218 ||||||||||||||||||||||||||| Sbjct: 368284 gaaaagaaagcaaaagcgattcccgta 368258 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 185010 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 185009 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 184950 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184949 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184890 Query: 192 gaaaagaaagcaaaagcgattcccgta 218 ||||||||||||||||||||||||||| Sbjct: 184889 gaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 115 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 174 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 175 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 235 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 295 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 354 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 355 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 414 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 415 gaccaccttgcaaggctaaatactcctgggtg 446 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 72 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 130 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 311 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 2919 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 2977 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 413 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2978 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 72 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 130 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 311 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 1174 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 1232 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 413 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1233 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 523 bits (264), Expect = e-145 Identities = 508/585 (86%), Gaps = 6/585 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 143999 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 144000 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 144059 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 144060 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 144119 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 144120 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 144179 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 144180 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 144239 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 144240 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 144299 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 144300 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 144359 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144360 aaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccc 144419 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 | || ||| ||||||||||||| |||||||| ||||||||||||||||||| || || Sbjct: 144420 c-gtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggaga 144474 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144475 atgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 523 bits (264), Expect = e-145 Identities = 508/585 (86%), Gaps = 6/585 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 88852 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 88851 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 88792 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 88791 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 88732 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 88731 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 88672 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 311 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 88671 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 88612 Query: 312 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 371 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 88611 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 88552 Query: 372 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 431 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 88551 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 88492 Query: 432 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 88491 aaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccc 88432 Query: 492 cagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 551 | || ||| ||||||||||||| |||||||| ||||||||||||||||||| || || Sbjct: 88431 c-gtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggaga 88377 Query: 552 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88376 atgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-140 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgt 286 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-140 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 252 gtgaaaacggggttgtgggagagcaatacaagcgt 286 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 498 bits (251), Expect = e-137 Identities = 268/271 (98%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 328 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 387 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 388 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 448 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaa 179 Query: 508 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccg 567 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 180 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccg 238 Query: 568 cgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||| Sbjct: 239 cgtgcctgttgaagaatgagccggcgactca 269
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 486 bits (245), Expect = e-134 Identities = 337/364 (92%), Gaps = 3/364 (0%) Strand = Plus / Plus Query: 10 agggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 69 ||||||||||||||||||||||| | | |||||||||||||| || |||||||||||||| Sbjct: 177051 agggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttc 177109 Query: 70 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 129 |||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 177110 ggggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc 177169 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||| Sbjct: 177170 -tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccag 177228 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 177229 aggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaa 177288 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 308 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | Sbjct: 177289 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagccc 177348 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 177349 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctct 177408 Query: 369 gacc 372 |||| Sbjct: 177409 gacc 177412 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 177444 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagc 186 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagc 186 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 432 bits (218), Expect = e-118 Identities = 505/593 (85%), Gaps = 21/593 (3%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 139247 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 139191 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139190 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 139132 Query: 132 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 187 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 139131 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 139075 Query: 188 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 247 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 139074 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 139015 Query: 248 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 303 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 139014 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 138956 Query: 304 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 363 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 138955 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 138896 Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138895 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 138836 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138835 gtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaa 138776 Query: 484 agaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 543 |||||||||| |||| ||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 138775 agaacccccatcgggg-agtgaaatagaacatgaaaccgta---agctcccgagcagtgg 138720 Query: 544 gagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138719 gaggagaattg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 138668 Score = 432 bits (218), Expect = e-118 Identities = 505/593 (85%), Gaps = 21/593 (3%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 82630 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 82686 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82687 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 82745 Query: 132 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 187 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 82746 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 82802 Query: 188 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 247 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 82803 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 82862 Query: 248 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 303 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 82863 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 82921 Query: 304 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 363 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 82922 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 82981 Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 82982 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 83041 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 83042 gtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaa 83101 Query: 484 agaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 543 |||||||||| |||| ||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 83102 agaacccccatcgggg-agtgaaatagaacatgaaaccgta---agctcccgagcagtgg 83157 Query: 544 gagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83158 gaggagaattg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 83209
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 110 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 169 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 230 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 289 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 290 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 349 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 350 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 409 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 410 gcaaggaccaccttgcaag 428 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 89.7 bits (45), Expect = 1e-14 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 437 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 496 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaaccccca-tc 3307 Query: 497 gggtagtgaaatagaacgtgaaacc 521 ||| |||||||||||| ||||||| Sbjct: 3306 ggggagtgaaatagaagatgaaacc 3282 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||| |||||||| | |||||||||||| ||| |||||||||||||||| | Sbjct: 3780 ggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaatgcttcag 3722 Query: 72 ggagttgaaaataagcatagatccggag 99 |||||| |||||||| |||||| |||| Sbjct: 3721 agagttgcaaataagcgtagatcaggag 3694 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||| ||| ||||||||||||||| ||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactca 3210
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 266 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 267 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 325 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 326 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 385 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 386 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 445 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 446 gaccgata 453 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 252 gtgaaaacggggttgtgg 269 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 398 bits (201), Expect = e-108 Identities = 218/221 (98%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 378 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 438 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-g 119 Query: 498 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 557 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 120 ggtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtga 178 Query: 558 tctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 tctctgaccgcgtgcctgttgaagaatgagccggcgactca 219
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 392 bits (198), Expect = e-106 Identities = 210/213 (98%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75846 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75847 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 75906 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75907 gcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75966 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcg 224 ||||||||||||||||||||||||||||||||| Sbjct: 75967 gaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggcgaactgaaacatcttag 182 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 389 bits (196), Expect = e-105 Identities = 308/342 (90%), Gaps = 5/342 (1%) Strand = Plus / Minus Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 314 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccta- 6046 Query: 495 tggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 554 | ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6045 tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatg 5990 Query: 555 tgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5989 gaatctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 54 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 113 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 114 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 173 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 174 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 233 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 234 atgggagcagcctaaaccgt 253 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 379 bits (191), Expect = e-102 Identities = 251/268 (93%), Gaps = 6/268 (2%) Strand = Plus / Plus Query: 331 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 390 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 391 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 451 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatag 510 ||||||||||||||||||||||||| ||||||||||||||||| | ||| |||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaaccccca-tcggggagtgaaatag 181 Query: 511 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 570 ||| |||||||| | |||||||||||||||||||||| | | |||||||||||| Sbjct: 182 aacatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctgaccgcgt 236 Query: 571 gcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||| Sbjct: 237 gcctgttgaagaatgagccggcgactca 264
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 375 bits (189), Expect = e-100 Identities = 203/205 (99%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 394 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 454 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaac 513 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtgaaatagaac 119 Query: 514 gtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcc 573 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 gtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcc 178 Query: 574 tgttgaagaatgagccggcgactca 598 ||||||||||||||||||||||||| Sbjct: 179 tgttgaagaatgagccggcgactca 203
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 349 bits (176), Expect = 7e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca-t 188 Query: 496 ggggtagtgaaatagaacgtgaaaccgt 523 ||| ||||||||||||| ||||||||| Sbjct: 189 cggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 321 bits (162), Expect = 1e-84 Identities = 431/510 (84%), Gaps = 12/510 (2%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 72 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 || |||| ||||||| || ||||||| ||| || || |||||| || || || || Sbjct: 255 cgctaaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtgga 311 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | Sbjct: 312 gttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgctttta 371 Query: 371 -cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacc 491 Query: 490 cccagtggggtagtgaaatagaacgtgaaa 519 |||| ||||| |||||| |||||| ||||| Sbjct: 492 cccattgggg-agtgaactagaacatgaaa 520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactca 593
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 219/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 82 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 141 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 201 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 261 Query: 252 gt 253 || Sbjct: 262 gt 263 Score = 272 bits (137), Expect = 1e-69 Identities = 207/227 (91%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 |||| | ||| ||||||||||||| |||||||| | ||| ||||||||||||| || Sbjct: 511 ccca-tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-gga 565 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 287 bits (145), Expect = 2e-74 Identities = 160/164 (97%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1625 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1626 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1685 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 175 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 281 bits (142), Expect = 1e-72 Identities = 217/241 (90%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 185 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 186 gaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 245 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 305 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 306 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 365 Query: 252 g 252 | Sbjct: 366 g 366 Score = 270 bits (136), Expect = 5e-69 Identities = 206/226 (91%), Gaps = 5/226 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 616 cca-tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 670 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 671 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 5e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 252 gt 253 || Sbjct: 249 gt 250 Score = 272 bits (137), Expect = 1e-69 Identities = 207/227 (91%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 |||| | ||| ||||||||||||| |||||||| | ||| ||||||||||||| || Sbjct: 498 ccca-tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-gga 552 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 553 gaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 280 bits (141), Expect = 5e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 82 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 141 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 201 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 261 Query: 252 gtgaaaacggggttgtgggagagc 275 | |||| ||||||||||||||||| Sbjct: 262 gcgaaagcggggttgtgggagagc 285 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 472 ggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagct 531 |||||||||||||||||||||| | ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaaccccca-tcggggagtgaaatagaacatgaaatcg---taagct 537 Query: 532 cccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 538 ttcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccgg 596 Query: 592 cgact 596 ||||| Sbjct: 597 cgact 601
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 280 bits (141), Expect = 5e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 125184 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 125183 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 125124 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 125123 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 125064 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 125063 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 125004 Query: 252 gtgaaaacggggttgtgggagagc 275 | |||| ||||||||||||||||| Sbjct: 125003 gcgaaagcggggttgtgggagagc 124980 Score = 280 bits (141), Expect = 5e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 94682 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 94683 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 94742 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 94743 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 94802 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 94803 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 94862 Query: 252 gtgaaaacggggttgtgggagagc 275 | |||| ||||||||||||||||| Sbjct: 94863 gcgaaagcggggttgtgggagagc 94886 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Minus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 472 ggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagct 531 |||||||||||||||||||||| | ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaaccccca-tcggggagtgaaatagaacatgaaatcg---taagct 124728 Query: 532 cccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 124727 ttcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccgg 124669 Query: 592 cgact 596 ||||| Sbjct: 124668 cgact 124664 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 472 ggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagct 531 |||||||||||||||||||||| | ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaaccccca-tcggggagtgaaatagaacatgaaatcg---taagct 95138 Query: 532 cccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 95139 ttcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccgg 95197 Query: 592 cgact 596 ||||| Sbjct: 95198 cgact 95202
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtag 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagt-gggtag 95430 Query: 503 tgaaatagaacgtgaaaccgtgctgagctcc 533 ||||||||||||||||||||||||||||||| Sbjct: 95431 tgaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtag 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagt-gggtag 759 Query: 503 tgaaatagaacgtgaaaccgtgctgagctcc 533 ||||||||||||||||||||||||||||||| Sbjct: 758 tgaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtag 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagt-gggtag 11893703 Query: 503 tgaaatagaacgtgaaaccgtgctgagctcc 533 ||||||||||||||||||||||||||||||| Sbjct: 11893704 tgaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtag 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagt-gggtag 11972110 Query: 503 tgaaatagaacgtgaaaccgtgctgagctcc 533 ||||||||||||||||||||||||||||||| Sbjct: 11972111 tgaaatagaacgtgaaaccgtgctgagctcc 11972141
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 96 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 155 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 156 acaacctggcgaactgaaacat 177 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 547 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 588 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 463 taccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 96 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 155 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 156 acaacctggcgaactgaaacat 177 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 96 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 155 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 156 acaacctggcgaactgaaacat 177 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 96 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 155 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 156 acaacctggcgaactgaaacat 177 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 272 bits (137), Expect = 1e-69 Identities = 207/227 (91%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 ||| || ||| ||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 457 ccc-gtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggag 512 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 513 aatag-aatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 41 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 99 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 100 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 159 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 160 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 220 tagcggcgagcgaaatgggagcagcctaaacc 251 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 264 bits (133), Expect = 3e-67 Identities = 225/253 (88%), Gaps = 7/253 (2%) Strand = Plus / Plus Query: 346 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 405 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 406 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 465 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 466 cgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgc 525 | |||||||| ||||||||||||||| | ||||| ||||||||||||| ||||| | Sbjct: 493 catgagggaagggtgaaaagaacccctattgggg-agtgaaatagaacatgaaaac---a 548 Query: 526 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 585 | |||| ||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 549 taagctaccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttgaagaatg 605 Query: 586 agccggcgactca 598 ||||||||||||| Sbjct: 606 agccggcgactca 618 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 204 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 205 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 264 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 265 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 324 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 325 a 325 | Sbjct: 325 a 325
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 254 bits (128), Expect = 3e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 70 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 89860 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 89802 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89801 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 89743 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89742 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 89683 Query: 191 ggaaaagaaagcaaa 205 ||||||||||||||| Sbjct: 89682 ggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 254 bits (128), Expect = 3e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 70 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 410 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 468 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 469 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 527 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 587 Query: 191 ggaaaagaaagcaaa 205 ||||||||||||||| Sbjct: 588 ggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 246 bits (124), Expect = 7e-62 Identities = 203/226 (89%), Gaps = 5/226 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 cca-tcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg 553 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 554 -ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 172 bits (87), Expect = 8e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 246 bits (124), Expect = 7e-62 Identities = 203/226 (89%), Gaps = 5/226 (2%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 cca-tcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg 115109 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115108 -ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 246 bits (124), Expect = 7e-62 Identities = 203/226 (89%), Gaps = 5/226 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| | ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 cca-tcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg 86879 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86880 -ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 115653 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 115595 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115594 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 115535 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 115534 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 115475 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115474 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 86335 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 86393 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86394 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 86453 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 86454 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 86513 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86514 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 242 bits (122), Expect = 1e-60 Identities = 203/226 (89%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || | |||| |||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 491 ccggagggg-agtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaag 546 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 547 aa---gat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 211 ttcccgtagtagcggcgagcgaa 233 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 299 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 358 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 359 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 418 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 419 accttgcaaggctaaatactcctgggtgaccga 451 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 234 bits (118), Expect = 3e-58 Identities = 202/226 (89%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || | |||| ||||||||||||| ||||||||| | ||| |||||||||||| || Sbjct: 530 ccggagggg-agtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gg 582 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 583 aaatagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 228 bits (115), Expect = 2e-56 Identities = 200/226 (88%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| |||| ||||||| ||||| ||||||||| |||| |||||||||||||||| Sbjct: 518 ccatcgggg-agtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggt 573 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| | |||||||||||||||||||||||||||||||||||| Sbjct: 574 aaag----ccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 2e-13 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 228 bits (115), Expect = 2e-56 Identities = 200/226 (88%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 ||| |||| ||||||| ||||| ||||||||| |||| |||||||||||||||| Sbjct: 2287 ccatcgggg-agtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggt 2342 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2343 aaag----ccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 1776 ggtggatacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 1834 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1835 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 228 bits (115), Expect = 2e-56 Identities = 226/262 (86%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 141 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 252 gtgaaaacggggttgtgggaga 273 |||||| ||||||||||||||| Sbjct: 262 gtgaaagcggggttgtgggaga 283 Score = 188 bits (95), Expect = 1e-44 Identities = 135/147 (91%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaaccccca- 503 Query: 495 tggggtagtgaaatagaacgtgaaacc 521 | ||| ||||||||||||| ||||||| Sbjct: 504 taggggagtgaaatagaacatgaaacc 530 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 228 bits (115), Expect = 2e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 4114 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4115 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 4173 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4174 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 4233 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4234 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 216 bits (109), Expect = 6e-53 Identities = 242/283 (85%), Gaps = 5/283 (1%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaaccccca-t 4548 Query: 496 ggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 555 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 4549 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 4605 Query: 556 gatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4606 -atctttgaccgcgtgcctgttgaagaatgagccggcgactca 4647
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 228 bits (115), Expect = 2e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 216 bits (109), Expect = 6e-53 Identities = 242/283 (85%), Gaps = 5/283 (1%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaaccccca-t 515 Query: 496 ggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 555 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 516 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 572 Query: 556 gatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 573 -atctttgaccgcgtgcctgttgaagaatgagccggcgactca 614
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 226 bits (114), Expect = 7e-56 Identities = 181/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 318 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 377 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 378 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 437 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 438 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 497 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 498 ggtagtgaaatagaacgtgaaa 519 || ||||||||||||| ||||| Sbjct: 512 gg-agtgaaatagaacatgaaa 532 Score = 182 bits (92), Expect = 9e-43 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 252 gtgaaaacggggttg 266 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 ||||||| |||| ||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactca 605
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 220 bits (111), Expect = 4e-54 Identities = 208/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 216 bits (109), Expect = 6e-53 Identities = 242/283 (85%), Gaps = 5/283 (1%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaaccccca-t 515 Query: 496 ggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 555 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 516 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 572 Query: 556 gatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 573 -atctttgaccgcgtgcctgttgaagaatgagccggcgactca 614
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 218 bits (110), Expect = 2e-53 Identities = 199/226 (88%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || | ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 cc-gcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg- 550 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 --cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 163 bits (82), Expect = 8e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 252 g 252 | Sbjct: 249 g 249
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 218 bits (110), Expect = 2e-53 Identities = 130/134 (97%), Gaps = 2/134 (1%) Strand = Plus / Minus Query: 465 ccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtg 524 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtggg-taatgaaatagaacgtgaaaccgtg 107992 Query: 525 ctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaat 584 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107991 ctgagctcccaaccagtgggagggg-aaagtgatctctgaccgcgtgcctgttgaagaat 107933 Query: 585 gagccggcgactca 598 |||||||||||||| Sbjct: 107932 gagccggcgactca 107919
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 153 bits (77), Expect = 8e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 15 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 74 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 75 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 133 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 134 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 193 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 194 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 248 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 501 Query: 513 cgtgaaa 519 | ||||| Sbjct: 502 catgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 580
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||| ||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 ag 240 || Sbjct: 245 ag 246 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 501 Query: 513 cgtgaaa 519 | ||||| Sbjct: 502 catgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 580
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 1e-51 Identities = 168/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 212 bits (107), Expect = 1e-51 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||| || Sbjct: 3057 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgctttgg 3115 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 3116 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 3175 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 | ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 3176 gtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 3235 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 3236 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 3295 Query: 252 gtgaaaacggggttgtgggaga 273 |||||| ||||||||||||||| Sbjct: 3296 gtgaaagcggggttgtgggaga 3317 Score = 188 bits (95), Expect = 1e-44 Identities = 135/147 (91%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaaccccca- 3537 Query: 495 tggggtagtgaaatagaacgtgaaacc 521 | ||| ||||||||||||| ||||||| Sbjct: 3538 taggggagtgaaatagaacatgaaacc 3564 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 210 bits (106), Expect = 4e-51 Identities = 198/226 (87%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 550 || || ||| ||||||||||||| ||||| || |||||| |||||||||||| || Sbjct: 637 cc-gtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gg 689 Query: 551 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 690 attttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatggga 239 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 208 bits (105), Expect = 2e-50 Identities = 205/235 (87%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 484 agaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 543 |||||||||| | ||| ||||||| ||||| |||||||| | ||| |||||||||| Sbjct: 500 agaaccccca-taggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtgg 555 Query: 544 gagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 || | ||| | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 556 ga-gaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactca 609 Score = 198 bits (100), Expect = 1e-47 Identities = 207/239 (86%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||| ||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaacgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcc 130 ||||| ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| Sbjct: 82 ggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc 141 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 142 -gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccaga 200 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 201 ggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 208 bits (105), Expect = 2e-50 Identities = 222/260 (85%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacct 141 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 252 gtgaaaacggggttgtggga 271 | |||| ||||||||||||| Sbjct: 262 gcgaaagcggggttgtggga 281 Score = 190 bits (96), Expect = 4e-45 Identities = 193/222 (86%), Gaps = 5/222 (2%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaaccccca- 503 Query: 495 tggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 554 | ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 504 taggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg 560 Query: 555 tgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | || ||||||||||||||||||||||||||||||||||| Sbjct: 561 -aacctttgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 206 bits (104), Expect = 6e-50 Identities = 141/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccg 522 || || ||| ||||||||||||| |||||||| Sbjct: 721 cc-gttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 56 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 115 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 116 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 175 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 176 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 235 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 236 gggagcagcctaaacc 251 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 204 bits (103), Expect = 2e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggggtagtgaaatagaa 512 || |||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattgggg-agtgaaatagaa 502 Query: 513 cgtgaaa 519 | ||||| Sbjct: 503 catgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 ag 240 || Sbjct: 245 ag 246 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 559 ctctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||| || |||||||||||||||| ||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactca 581
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 202 bits (102), Expect = 9e-49 Identities = 142/153 (92%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg--agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 230 cgaaatgggagcagcctaaacc 251 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621 Score = 46.1 bits (23), Expect = 0.13 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 490 cc 491 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 149 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 208 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 209 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 72 ggagttgaaaataagcatagatccggagat 101 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 563 gaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 200 bits (101), Expect = 4e-48 Identities = 164/184 (89%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| |||||||||| || |||||||| ||||||| Sbjct: 724 ggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcgg 782 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| ||| Sbjct: 783 ggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcct 842 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagag 902 Query: 192 gaaa 195 |||| Sbjct: 903 gaaa 906
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 200 bits (101), Expect = 4e-48 Identities = 141/153 (92%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 811 cc-gttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 147 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 206 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 6e-47 Identities = 200/227 (88%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg--agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg 615 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 g--tttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 196 bits (99), Expect = 6e-47 Identities = 114/119 (95%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacc 676 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 230 cgaaatgggagcagcctaaacc 251 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 196 bits (99), Expect = 6e-47 Identities = 198/227 (87%), Gaps = 8/227 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||| |||| |||| ||||||||||| || Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaa-cc 505 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-g 549 || |||||| ||||||||||||| ||||||||| | ||| ||||||||||||||| Sbjct: 506 cctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggtt 562 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 563 gaaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 196 bits (99), Expect = 6e-47 Identities = 139/151 (92%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaa-cc 489 Query: 491 ccagtggggtagtgaaatagaacgtgaaacc 521 || || ||| ||||||||||||| ||||||| Sbjct: 490 cctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 19 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 78 |||||||||||||| | |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctg 67 Query: 79 aaaataagcatagatccggagattcccaaataggtcaacct 119 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 68 gaaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 196 bits (99), Expect = 6e-47 Identities = 139/151 (92%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaa-cc 25298 Query: 491 ccagtggggtagtgaaatagaacgtgaaacc 521 || || ||| ||||||||||||| ||||||| Sbjct: 25299 cctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 77.8 bits (39), Expect = 4e-11 Identities = 94/110 (85%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 10 agggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 69 |||| ||||||||||||||| || | |||| ||||||||| | || |||||||| ||||| Sbjct: 24810 agggcggatacctaggcacctagag-acgatgaagggcgtgg-aaccgacgaaacgcttc 24867 Query: 70 ggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||||| || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24868 ggggagctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 196 bits (99), Expect = 6e-47 Identities = 198/227 (87%), Gaps = 8/227 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||| |||| |||| ||||||||||| || Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaa-cc 505 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-g 549 || |||||| ||||||||||||| ||||||||| | ||| ||||||||||||||| Sbjct: 506 cctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggtt 562 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 563 gaaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 196 bits (99), Expect = 6e-47 Identities = 136/147 (92%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaaccccca- 2270 Query: 495 tggggtagtgaaatagaacgtgaaacc 521 | ||| ||||||||||||| ||||||| Sbjct: 2271 taggggagtgaaatagaacatgaaacc 2297 Score = 192 bits (97), Expect = 9e-46 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 1848 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 1849 ggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacct 1908 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 1909 gtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 1968 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||| Sbjct: 1969 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaacc 2028 Query: 252 gtgaaaacggggttgtggga 271 || ||| ||||||||||||| Sbjct: 2029 gttaaagcggggttgtggga 2048
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 194 bits (98), Expect = 2e-46 Identities = 141/153 (92%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg--agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 230 cgaaatgggagcagcctaaacc 251 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 |||| | ||| ||||||||||| |||||||| | |||| |||||||||||| | Sbjct: 904 ccca-taggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaa 958 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 959 gaatctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 176 bits (89), Expect = 5e-41 Identities = 206/242 (85%), Gaps = 4/242 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaaatgcttcgg 484 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| | Sbjct: 485 ttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgctt 541 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||||| ||| || | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 542 gctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagag 601 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||| |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 602 gaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 661 Query: 252 gt 253 || Sbjct: 662 gt 663
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 512 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 513 cctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 226 cgagcgaaatgggagcagcctaaac 250 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 569 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 570 cctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 137 bits (69), Expect = 5e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 132 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 251 cg 252 || Sbjct: 248 cg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 151872 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 151871 cctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 42331 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 42332 cctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431 Score = 42.1 bits (21), Expect = 2.1 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 152360 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 152302 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152301 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 42.1 bits (21), Expect = 2.1 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 41843 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 41901 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41902 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 569 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 570 cctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 512 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 513 cctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 226 cgagcgaaatgggagcagcctaaac 250 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 503 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 504 cctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 42.1 bits (21), Expect = 2.1 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 15 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 73 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 74 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 192 bits (97), Expect = 9e-46 Identities = 140/153 (91%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 588 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 589 cctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688 Score = 42.1 bits (21), Expect = 2.1 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 100 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 158 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 159 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 190 bits (96), Expect = 4e-45 Identities = 199/229 (86%), Gaps = 12/229 (5%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 431 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 547 ||| || ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 523 ccc-gtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 576 Query: 548 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || | | | |||||||||||||||||||||||||||||||||||| Sbjct: 577 ggttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 230 cgaa 233 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 190 bits (96), Expect = 4e-45 Identities = 199/229 (86%), Gaps = 12/229 (5%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 431 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 547 ||| || ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 504 ccc-gtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 548 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || | | | |||||||||||||||||||||||||||||||||||| Sbjct: 558 ggttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 230 cgaa 233 |||| Sbjct: 219 cgaa 222
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 190 bits (96), Expect = 4e-45 Identities = 199/229 (86%), Gaps = 12/229 (5%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 431 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 547 ||| || ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 523 ccc-gtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 576 Query: 548 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 || | | | |||||||||||||||||||||||||||||||||||| Sbjct: 577 ggttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 230 cgaa 233 |||| Sbjct: 238 cgaa 241
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 188 bits (95), Expect = 1e-44 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 548 || ||||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 629 ccgttgggg-agtgaaatagaacatgaaaccgtttgctga-----caagcagtgggaggg 682 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | || | | |||||||||||||||||||||||||||||||||||| Sbjct: 683 tgtaa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgact 726 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 188 bits (95), Expect = 1e-44 Identities = 135/147 (91%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 365 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 424 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 425 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 484 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 485 gaacccccagtggggtagtgaaataga 511 ||||||||| ||||| ||||||||||| Sbjct: 458 gaacccccactgggg-agtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 158 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 217 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 218 agtagcggcgagcgaaatgggagcagcctaaacc 251 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 186 bits (94), Expect = 6e-44 Identities = 137/150 (91%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 494 gtggggtagtgaaatagaacgtgaaaccgt 523 | |||| ||||||||||||| ||||||||| Sbjct: 121 gagggg-agtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| | || Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagta-cc 702 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || |||||| ||||||||||||| ||||||||| Sbjct: 703 cctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||| |||||| Sbjct: 769 tgaccgcgtgcctgttgaagaatgagcctgcgact 803
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 184 bits (93), Expect = 2e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaa-cc 635 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || |||||| ||||||||||||| ||||||||| Sbjct: 636 cctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 139 bits (70), Expect = 1e-29 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 19 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 78 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 79 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 138 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 139 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 198 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||| ||||||||||||||||||||| Sbjct: 700 ctgaccgcgtgcctattgaagaatgagccggcgact 735
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 512 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 513 cctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 184 bits (93), Expect = 2e-43 Identities = 197/228 (86%), Gaps = 9/228 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||| || Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaa-cc 543 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 548 || || ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 544 cctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggc 598 Query: 549 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||| || | |||||||||||||| ||||||||||||||||||||| Sbjct: 599 aaaaaaagagc-ctgaccgcgtgcctattgaagaatgagccggcgact 645 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaa-cc 635 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || |||||| ||||||||||||| ||||||||| Sbjct: 636 cctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 139 bits (70), Expect = 1e-29 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 19 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 78 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 79 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 138 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 139 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 198 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||| ||||||||||||||||||||| Sbjct: 700 ctgaccgcgtgcctattgaagaatgagccggcgact 735
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa-cc 520 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 521 cctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620 Score = 42.1 bits (21), Expect = 2.1 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 182 bits (92), Expect = 9e-43 Identities = 139/152 (91%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 490 cccagtggggtagtgaaatagaacgtgaaacc 521 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 182 bits (92), Expect = 9e-43 Identities = 139/152 (91%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 490 cccagtggggtagtgaaatagaacgtgaaacc 521 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 125 bits (63), Expect = 2e-25 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 136496 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 136554 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 136555 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 136614 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 136615 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 136674 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 136675 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 136734 Query: 252 g 252 | Sbjct: 136735 g 136735 Score = 125 bits (63), Expect = 2e-25 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 49048 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 48990 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 48989 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 48930 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 48929 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 48870 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 48869 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 48810 Query: 252 g 252 | Sbjct: 48809 g 48809 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||| ||||||||||||||||| ||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgact 137087 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||| ||||||||||||||||| ||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgact 48457
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 182 bits (92), Expect = 9e-43 Identities = 159/178 (89%), Gaps = 5/178 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 489 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 || | |||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggagggg-agtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgactc 597 |||||||||||||||||||||||||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactc 575
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 180 bits (91), Expect = 3e-42 Identities = 157/177 (88%), Gaps = 4/177 (2%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 ||| | ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 cca-tcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 180 bits (91), Expect = 3e-42 Identities = 157/177 (88%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 ||| | ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 cca-tcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 171496 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 171438 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171437 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 121430 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 121488 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121489 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 180 bits (91), Expect = 3e-42 Identities = 137/151 (90%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa-cc 361 Query: 491 ccagtggggtagtgaaatagaacgtgaaacc 521 || || ||| ||||||||||||| ||||||| Sbjct: 362 cctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 180 bits (91), Expect = 3e-42 Identities = 157/177 (88%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 547 ||| | ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 cca-tcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 21 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 180 bits (91), Expect = 3e-42 Identities = 198/227 (87%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 ||| || ||| ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtaggg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg 680 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 | || | |||||||||||||||||||||||||||||||||||| Sbjct: 681 tta---ga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 178 bits (90), Expect = 1e-41 Identities = 140/154 (90%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 419 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 478 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| | Sbjct: 479 taaatactcctgaatgaccgatagcgaaatagtaccgtgagggaaaggtgaaacagaa-c 537 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgt 523 |||||| ||| ||||||| ||||| ||||||||| Sbjct: 538 cccagtcggggagtgaaaaagaacatgaaaccgt 571 Score = 111 bits (56), Expect = 3e-21 Identities = 161/196 (82%) Strand = Plus / Plus Query: 56 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 115 |||||||| |||||||||||||| ||| |||||| |||||| |||||||| ||| || | Sbjct: 53 cgacgaaacgcttcggggagttggaaacaagcattgatccgaagattcccgaatggggaa 112 Query: 116 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 175 |||| | ||||||| | ||||| ||| | | |||||| ||| || |||||||||| Sbjct: 113 acctgtaaaactgcttattgaattcatagataagtaagagataacttgctgaactgaaac 172 Query: 176 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 235 ||||||||| || ||||| |||||||||| |||||| || |||||||||||||||||| Sbjct: 173 atcttagtaagcaaaggaagagaaagcaaacgcgatttccttagtagcggcgagcgaaac 232 Query: 236 gggagcagcctaaacc 251 || | ||||||||||| Sbjct: 233 ggaaacagcctaaacc 248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||| ||||||||||||||||||||||||||| Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgact 632
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 178 bits (90), Expect = 1e-41 Identities = 140/154 (90%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 192250 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 192309 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 192310 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-c 192368 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgt 523 |||||| ||| ||||||||||||| ||||||||| Sbjct: 192369 cccagtcggggagtgaaatagaacatgaaaccgt 192402 Score = 178 bits (90), Expect = 1e-41 Identities = 140/154 (90%), Gaps = 2/154 (1%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 144532 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 144473 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 144472 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaacc 144413 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgt 523 || ||| ||| ||||||||||||| ||||||||| Sbjct: 144412 cc-agtcggggagtgaaatagaacatgaaaccgt 144380 Score = 115 bits (58), Expect = 2e-22 Identities = 195/240 (81%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| ||| | ||| ||||||||| | | |||||||| ||||||| Sbjct: 191861 ggtggatacctaggcattcagagg-cgatgaagggcgtggataccgacgaaacgcttcgg 191919 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| ||| ||||| |||||| |||||||| |||||| ||||| | ||||||| | Sbjct: 191920 ggagttggaaacgagcattgatccgaagattcccgaatagggaaacctgtaaaactgctt 191979 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||| ||| | | ||||| |||| || ||| ||||||||||||||| || || Sbjct: 191980 attgaattcatagataagtaagaggcaacttgctgaattgaaacatcttagtaagcaaag 192039 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| |||||| || |||||||||||||||||| || | ||||||||||| Sbjct: 192040 gaaaagaaagcaaacgcgatttccttagtagcggcgagcgaaacggaaccagcctaaacc 192099 Score = 115 bits (58), Expect = 2e-22 Identities = 195/240 (81%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| ||| | ||| ||||||||| | | |||||||| ||||||| Sbjct: 144921 ggtggatacctaggcattcagagg-cgatgaagggcgtggataccgacgaaacgcttcgg 144863 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 ||||||| ||| ||||| |||||| |||||||| |||||| ||||| | ||||||| | Sbjct: 144862 ggagttggaaacgagcattgatccgaagattcccgaatagggaaacctgtaaaactgctt 144803 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||| ||| | | ||||| |||| || ||| ||||||||||||||| || || Sbjct: 144802 attgaattcatagataagtaagaggcaacttgctgaattgaaacatcttagtaagcaaag 144743 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| |||||| || |||||||||||||||||| || | ||||||||||| Sbjct: 144742 gaaaagaaagcaaacgcgatttccttagtagcggcgagcgaaacggaaccagcctaaacc 144683 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgact 192463 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgact 144319
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 490 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 549 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||| ||| |||||||||| ||| ||||||||||||||||||||||||| | || Sbjct: 550 taaatacttttggatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaagaacc 609 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||||||||| ||||||||| Sbjct: 610 cctgtaggggagtgaaatagaacatgaaaccgt 642 Score = 161 bits (81), Expect = 3e-36 Identities = 183/217 (84%) Strand = Plus / Plus Query: 36 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95 |||| ||||||||| | || |||||||| |||||| |||| || ||| ||||| ||| | Sbjct: 26 acgatgaagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgattc 85 Query: 96 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 155 |||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| ||||| Sbjct: 86 ggagattcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaagag 145 Query: 156 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 215 |||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 146 acaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattccc 205 Query: 216 gtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||||| ||||| ||| |||||||| Sbjct: 206 gtagtagcggcgagcgaactgggaacagtctaaaccg 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgact 727
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 ||| | ||| ||||||||||| | ||||||||| Sbjct: 491 cca-taggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 41 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 100 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 101 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 160 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 161 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 220 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 221 agcggcgagcgaaatgggagcagcctaaaccg 252 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 560 tctgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 490 c 490 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactca 588 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 490 c 490 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactca 601 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 490 c 490 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgactca 598 |||||||||||||||||||||||||||||||||||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactca 5175 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 174 bits (88), Expect = 2e-40 Identities = 205/241 (85%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 || ||| |||||||||| ||| | |||| ||||||||| | || | |||||||||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgaagaagggcgtggaaaccaacgaaatgcttcgg 68 Query: 72 ggagttgaaaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||| || ||| |||| ||| |||||||||||||| |||||| |||||| || ||| || Sbjct: 69 ggagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacc 127 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 | ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| || Sbjct: 128 tattgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagccgga 187 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 251 c 251 | Sbjct: 248 c 248 Score = 161 bits (81), Expect = 3e-36 Identities = 135/153 (88%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| |||||| |||||||| |||||||| |||||||||||||||| | || Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 491 ccagtggggtagtgaaatagaacgtgaaaccgt 523 || || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 ||||||||| ||||||||||||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgact 600
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 174 bits (88), Expect = 2e-40 Identities = 108/112 (96%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 479 tgaaaagaacccccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 538 ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107567 tgaaaagaacccctag-ggggtagtgaaatagaacgtgaaacagtgctgagctcccaagc 107509 Query: 539 agtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 590 ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107508 agtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 174 bits (88), Expect = 2e-40 Identities = 196/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 489 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| ||||| Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 490 cccagtggggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 549 | || ||| ||||||| ||||| ||||||||| |||| ||||||||||||||| Sbjct: 618 ct--gtaggggagtgaaacagaacatgaaaccgta---agctgtcaagcagtgggagggc 672 Query: 550 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 673 gaaa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgact 715 Score = 129 bits (65), Expect = 1e-26 Identities = 198/240 (82%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||| | || | |||| ||||||||| | || | ||||||||||||| Sbjct: 123 ggtggatacctaggcatctagag-acgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || ||| |||| ||| ||||||||||| |||||| |||||||||| ||| ||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaaccttttatactacct 241 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||||| ||| ||| ||||||||||| | ||| |||||||||||||||| ||| Sbjct: 242 attgaattcatagataggaaagagacaacccagtgaag-gaaacatcttagtagctggag 300 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 301 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 172 bits (87), Expect = 8e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacc 499 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 562 tgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||| |||||||||||||||||||| ||||||| Sbjct: 565 tgaccgtgtgcctgttgaagaatgagctggcgact 599 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||||||||||||| | |||| |||||||||| | |||||| | ||||||| Sbjct: 10 ggtggatacctaggcacccaaag-acgatgaagggcgtacttaccgacgatacgcttcgg 68 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||| || || | || | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaatgacgctttgatccgaagattcccgaatagggcaacct 116
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 172 bits (87), Expect = 8e-40 Identities = 136/151 (90%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaa-cc 516 Query: 491 ccagtggggtagtgaaatagaacgtgaaacc 521 || || ||| ||||||||||||| ||||||| Sbjct: 517 cctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 172 bits (87), Expect = 8e-40 Identities = 136/151 (90%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaa-cc 516 Query: 491 ccagtggggtagtgaaatagaacgtgaaacc 521 || || ||| ||||||||||||| ||||||| Sbjct: 517 cctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 12 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 71 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 72 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 131 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 132 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 191 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 192 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 ctgaccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,060,812 Number of Sequences: 3902068 Number of extensions: 4060812 Number of successful extensions: 120045 Number of sequences better than 10.0: 26622 Number of HSP's better than 10.0 without gapping: 26444 Number of HSP's successfully gapped in prelim test: 209 Number of HSP's that attempted gapping in prelim test: 75031 Number of HSP's gapped (non-prelim): 42220 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
