| Clone Name | baal0g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009342.1| Triticum aestivum clone wlm4.pk0018.d5:fis, full insert mRNA sequence Length = 1719 Score = 678 bits (342), Expect = 0.0 Identities = 362/369 (98%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 aaaggagatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 809 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 869 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 870 tcatctaggtgatcgaatttatcctgcagatttgcctatcagatatgctgggttctccac 929 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 989 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 |||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||||| Sbjct: 990 ccagtttgaaaagatcgagcagttctgcgccacaggtccaaatgacaatgtatcctggga 1049 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 1109 Query: 361 tcaactagt 369 ||||||||| Sbjct: 1110 tcaactagt 1118
>dbj|AK103101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N18, full insert sequence Length = 1846 Score = 347 bits (175), Expect = 2e-92 Identities = 318/366 (86%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 694 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaagct 753 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| || Sbjct: 754 aacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgta 813 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 |||||| |||||||||||||||||||| || ||||| || ||||||||||| | ||||| Sbjct: 814 tcatcttggtgatcgaatttatcctgctgaattgccaattagatatgctggatattccac 873 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 874 ctgtttccggaaagaagctggttcacatgggagggacacggctggtatcttcagagtcca 933 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 ||| |||||||||||||| || |||||| ||||| |||||||||||| | ||| ||||| Sbjct: 934 ccaatttgaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttggga 993 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| || |||||||||||| |||||||||| || ||| |||||| ||||| || Sbjct: 994 gatgcatgaagaaatgattaaaaattcagaagatttctacaaggagattggcctaccgta 1053 Query: 361 tcaact 366 |||||| Sbjct: 1054 tcaact 1059
>dbj|AK059522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C08, full insert sequence Length = 1842 Score = 347 bits (175), Expect = 2e-92 Identities = 318/366 (86%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 690 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaagct 749 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| || Sbjct: 750 aacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgta 809 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 |||||| |||||||||||||||||||| || ||||| || ||||||||||| | ||||| Sbjct: 810 tcatcttggtgatcgaatttatcctgctgaattgccaattagatatgctggatattccac 869 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 870 ctgtttccggaaagaagctggttcacatgggagggacacggctggtatcttcagagtcca 929 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 ||| |||||||||||||| || |||||| ||||| |||||||||||| | ||| ||||| Sbjct: 930 ccaatttgaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttggga 989 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| || |||||||||||| |||||||||| || ||| |||||| ||||| || Sbjct: 990 gatgcatgaagaaatgattaaaaattcagaagatttctacaaggagattggcctaccgta 1049 Query: 361 tcaact 366 |||||| Sbjct: 1050 tcaact 1055
>dbj|AK105730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H03, full insert sequence Length = 1771 Score = 339 bits (171), Expect = 4e-90 Identities = 317/366 (86%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| | Sbjct: 733 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaagct 792 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| || Sbjct: 793 aacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgta 852 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||||||||||||||||||||||||||| || ||||| || ||||||||||| | ||||| Sbjct: 853 tcatctaggtgatcgaatttatcctgctgaattgccaattagatatgctggatattccac 912 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 913 ctgcttccggaaagaagctggttcacatggaagggacacggctggtatcttcagagtcca 972 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 ||| || |||||||| ||||| |||||| |||| |||||||||||| | ||||||||| Sbjct: 973 ccaattcgaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctggga 1032 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| || ||||| |||||| |||||||||| || ||| |||||| ||||| || Sbjct: 1033 gatgcatgaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgta 1092 Query: 361 tcaact 366 ||||| Sbjct: 1093 ccaact 1098
>dbj|AK069764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G18, full insert sequence Length = 1799 Score = 339 bits (171), Expect = 4e-90 Identities = 317/366 (86%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| | Sbjct: 685 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaagct 744 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| || Sbjct: 745 aacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgta 804 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||||||||||||||||||||||||||| || ||||| || ||||||||||| | ||||| Sbjct: 805 tcatctaggtgatcgaatttatcctgctgaattgccaattagatatgctggatattccac 864 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 865 ctgcttccggaaagaagctggttcacatggaagggacacggctggtatcttcagagtcca 924 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 ||| || |||||||| ||||| |||||| |||| |||||||||||| | ||||||||| Sbjct: 925 ccaattcgaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctggga 984 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| || ||||| |||||| |||||||||| || ||| |||||| ||||| || Sbjct: 985 gatgcatgaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgta 1044 Query: 361 tcaact 366 ||||| Sbjct: 1045 ccaact 1050
>ref|NM_193493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 311 bits (157), Expect = 9e-82 Identities = 314/366 (85%), Gaps = 3/366 (0%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| | Sbjct: 609 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaaggc 668 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 || | || |||||||| ||||||||||| || ||||| ||||||||||| ||||| || Sbjct: 669 aa---gcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgta 725 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||||||||||||||||||||||||||| || ||||| || ||||||||||| | ||||| Sbjct: 726 tcatctaggtgatcgaatttatcctgctgaattgccaattagatatgctggatattccac 785 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 786 ctgcttccggaaagaagctggttcacatggaagggacacggctggtatcttcagagtcca 845 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 ||| || |||||||| ||||| |||||| |||| |||||||||||| | ||||||||| Sbjct: 846 ccaattcgaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctggga 905 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| || ||||| |||||| |||||||||| || ||| |||||| ||||| || Sbjct: 906 gatgcatgaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgta 965 Query: 361 tcaact 366 ||||| Sbjct: 966 ccaact 971
>gb|AY103609.1| Zea mays PCO093348 mRNA sequence Length = 1932 Score = 272 bits (137), Expect = 7e-70 Identities = 304/360 (84%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 686 aaaggaaactatggcaaaatgtgcccagttggcccagtttgatgaggagctttacaaagt 745 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||||| || ||||| || ||||||||||| ||||| ||||| || |||||||||| Sbjct: 746 tacaggtgatggcgaggacaaatatctcatagctacatcagagcagcctttatgtgctta 805 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||| ||||||||||||| || ||||| || | || |||| ||||||||||| |||||| Sbjct: 806 tcacttaggtgatcgaatctaccctgctgaacttccaatcaaatatgctgggtactccac 865 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 ||||||||||| ||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 866 atgcttccggaaggaagctggttctcatggaagggacacagctggtatcttcagagtcca 925 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 |||||||||||| || || || |||| |||| ||||||| ||| | |||||||| Sbjct: 926 ccagtttgaaaaaattgaacaattctgcattacaagcccaaatggcaatgattcctggga 985 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 || ||||| |||||| | |||||| |||||||||| || ||| ||||||||||||||| Sbjct: 986 gatccatgaagagatgctaaaaaattcagaagatttctacaaggagattgggctaccata 1045
>gb|BT017097.1| Zea mays clone EL01N0361G05.c mRNA sequence Length = 1308 Score = 264 bits (133), Expect = 2e-67 Identities = 303/360 (84%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 349 aaaggaaactatggcaaaatgtgcccagttggcccagtttgatgaggagctttacaaagt 408 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||||| || || || || ||||||||||| ||||| ||||| || |||||||||| Sbjct: 409 tacaggtgatggtgaagacaaatatctcatagctacatcagagcagcctttatgtgctta 468 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||| |||||||| |||| || ||||| || | || |||| ||||||||||| |||||| Sbjct: 469 tcacttaggtgatagaatataccctgctgaacttccaatcaaatatgctgggtactccac 528 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 ||||||||||| ||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 529 atgcttccggaaggaagctggttcgcatggaagggacacagctggtatcttcagagtcca 588 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 |||||||||||| ||||| || |||| |||| ||||||||||| | || ||||| Sbjct: 589 ccagtttgaaaaaatcgaacaattctgcattacaagcccaaatgacaatgattcttggga 648 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 |||||||| |||||| | ||||| ||||||||| ||| ||| ||||||||||||||| Sbjct: 649 gatgcatgaagagatgctaaaaaactcagaagattactataaggagattgggctaccata 708
>emb|AJ007665.1|ZMA7665 Zea mays mRNA for cytosolic seryl-tRNA synthetase Length = 1907 Score = 264 bits (133), Expect = 2e-67 Identities = 303/360 (84%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagt 60 |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 660 aaaggaaactatggcaaaatgtgcccagttggcccagtttgatgaggagctttacaaggt 719 Query: 61 aacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctta 120 |||||||| || ||||| || ||||||||||| ||||| ||||| || |||||||||| Sbjct: 720 tacaggtgatggcgaggacaaatatctcatagctacatcagagcagcctttatgtgctta 779 Query: 121 tcatctaggtgatcgaatttatcctgcagatttgccgatcagatatgctgggttctccac 180 ||| ||||||||||||| || ||||| || | || |||| ||||||||||| |||||| Sbjct: 780 tcacttaggtgatcgaatctaccctgctgaacttccaatcaaatatgctgggtactccac 839 Query: 181 gtgcttccggaaagaagctggttcacacgggagggacacagctggcatcttcagagtcca 240 ||||||||||| ||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 840 atgcttccggaaggaagctggttctcatggaagggacacagctggtatcttcagagtcca 899 Query: 241 ccagtttgaaaagatcgagcagntctgtgccacaaatccaaatgacaacgtatcctggga 300 |||||||||||| || || || |||| |||| ||||||| ||| | |||||||| Sbjct: 900 ccagtttgaaaaaattgaacaattctgcattacaagcccaaatggcaatgattcctggga 959 Query: 301 aatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccata 360 || ||||| |||||| | |||||| |||||||||| || ||| ||||||||||||||| Sbjct: 960 gatccatgaagagatgctaaaaaattcagaagatttctacaaggagattgggctaccata 1019
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 184 bits (93), Expect = 1e-43 Identities = 155/176 (88%) Strand = Plus / Plus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 5137808 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 5137867 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| |||||||||||||| || |||||| ||||| |||| Sbjct: 5137868 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 5137927 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 5137928 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 5137983 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 5137627 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 5137686 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 ||||||| |||||||||||||||||||| || ||||| Sbjct: 5137687 atcatcttggtgatcgaatttatcctgctgaattgcc 5137723 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 5137304 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaa 5137360
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 184 bits (93), Expect = 1e-43 Identities = 155/176 (88%) Strand = Plus / Minus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 31897 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 31838 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| |||||||||||||| || |||||| ||||| |||| Sbjct: 31837 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 31778 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 31777 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 31722 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 32078 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 32019 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 ||||||| |||||||||||||||||||| || ||||| Sbjct: 32018 atcatcttggtgatcgaatttatcctgctgaattgcc 31982 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 32401 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaa 32345
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 184 bits (93), Expect = 1e-43 Identities = 155/176 (88%) Strand = Plus / Minus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 118710 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 118651 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| |||||||||||||| || |||||| ||||| |||| Sbjct: 118650 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 118591 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 118590 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 118535 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 118891 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 118832 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 ||||||| |||||||||||||||||||| || ||||| Sbjct: 118831 atcatcttggtgatcgaatttatcctgctgaattgcc 118795 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 119214 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaa 119158
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 184 bits (93), Expect = 1e-43 Identities = 155/176 (88%) Strand = Plus / Plus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 5137025 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 5137084 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| |||||||||||||| || |||||| ||||| |||| Sbjct: 5137085 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 5137144 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 5137145 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 5137200 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 5136844 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 5136903 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 ||||||| |||||||||||||||||||| || ||||| Sbjct: 5136904 atcatcttggtgatcgaatttatcctgctgaattgcc 5136940 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 5136521 aaaggaaaccatgggaaaatgtgcccagttggcccaattcgacgaagagctttacaa 5136577
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 168 bits (85), Expect = 8e-39 Identities = 153/176 (86%) Strand = Plus / Plus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 21174866 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 21174925 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| || |||||||| ||||| |||||| |||| |||| Sbjct: 21174926 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 21174985 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 21174986 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 21175041 Score = 113 bits (57), Expect = 4e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 21174688 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 21174747 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 |||||||||||||||||||||||||||| || ||||| Sbjct: 21174748 atcatctaggtgatcgaatttatcctgctgaattgcc 21174784 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 21174378 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaa 21174434
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 168 bits (85), Expect = 8e-39 Identities = 153/176 (86%) Strand = Plus / Plus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 142411 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 142470 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| || |||||||| ||||| |||||| |||| |||| Sbjct: 142471 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 142530 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 142531 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 142586 Score = 113 bits (57), Expect = 4e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 142233 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 142292 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 |||||||||||||||||||||||||||| || ||||| Sbjct: 142293 atcatctaggtgatcgaatttatcctgctgaattgcc 142329 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 141923 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaa 141979
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 168 bits (85), Expect = 8e-39 Identities = 153/176 (86%) Strand = Plus / Plus Query: 161 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 220 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 72375 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 72434 Query: 221 gctggcatcttcagagtccaccagtttgaaaagatcgagcagntctgtgccacaaatcca 280 ||||| ||||||||||||||||| || |||||||| ||||| |||||| |||| |||| Sbjct: 72435 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 72494 Query: 281 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 336 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 72495 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 72550 Score = 113 bits (57), Expect = 4e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 60 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 119 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 72197 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 72256 Query: 120 atcatctaggtgatcgaatttatcctgcagatttgcc 156 |||||||||||||||||||||||||||| || ||||| Sbjct: 72257 atcatctaggtgatcgaatttatcctgctgaattgcc 72293 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1 aaaggaaatcatggcaaaatgtgcccagttggcccaatttgatgaggagctctacaa 57 |||||||| ||||| ||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 71887 aaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctttacaa 71943
>emb|Z98761.1|HASERTS Helianthus annuus mRNA for seryl-tRNA synthetase Length = 1620 Score = 85.7 bits (43), Expect = 9e-14 Identities = 103/123 (83%) Strand = Plus / Plus Query: 11 atggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagtaacaggtgac 70 |||| ||||||||| ||||| || ||||||||||| || || ||||| ||||||||||| Sbjct: 728 atgggaaaatgtgctcagttagcacaatttgatgaagaactttacaaggtaacaggtgag 787 Query: 71 ggagaggataagtatctcatagcaacatcggagcaaccgctatgtgcttatcatctaggt 130 ||||| || |||||||| || ||||| | || ||||||||||||||||| ||| ||| | Sbjct: 788 ggagatgacaagtatctgattgcaactgctgaacaaccgctatgtgcttaccatatagat 847 Query: 131 gat 133 ||| Sbjct: 848 gat 850 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 296 tgggaaatgcatgaggagatgattaaaaatgcagaagatttttatcag 343 |||||||||||||| ||||||||||||||| | || || ||||||||| Sbjct: 1013 tgggaaatgcatgaagagatgattaaaaattctgaggagttttatcag 1060 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 180 cgtgcttccggaaagaagctggttcacacgggagggacac 219 ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 897 cgtgctttcgtaaggaagctggctcacacgggagagacac 936
>ref|XM_504912.1| Yarrowia lipolytica CLIB122, YALI0F02629g predicted mRNA Length = 1362 Score = 52.0 bits (26), Expect = 0.001 Identities = 37/41 (90%) Strand = Plus / Plus Query: 227 atcttcagagtccaccagtttgaaaagatcgagcagntctg 267 |||||| |||||||||||||||| ||||| |||||| |||| Sbjct: 850 atcttccgagtccaccagtttgagaagattgagcagttctg 890
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 52.0 bits (26), Expect = 0.001 Identities = 37/41 (90%) Strand = Plus / Minus Query: 227 atcttcagagtccaccagtttgaaaagatcgagcagntctg 267 |||||| |||||||||||||||| ||||| |||||| |||| Sbjct: 390011 atcttccgagtccaccagtttgagaagattgagcagttctg 389971
>ref|XM_788449.1| PREDICTED: Strongylocentrotus purpuratus similar to seryl-aminoacyl-tRNA synthetase 1 (LOC588782), mRNA Length = 1676 Score = 50.1 bits (25), Expect = 0.005 Identities = 39/44 (88%) Strand = Plus / Plus Query: 224 ggcatcttcagagtccaccagtttgaaaagatcgagcagntctg 267 |||||||| ||||| || |||||||||||||| |||||| |||| Sbjct: 1044 ggcatctttagagttcatcagtttgaaaagattgagcagttctg 1087
>ref|NM_001031392.1| Gallus gallus seryl-tRNA synthetase (SARS), mRNA Length = 1883 Score = 46.1 bits (23), Expect = 0.080 Identities = 35/39 (89%) Strand = Plus / Plus Query: 224 ggcatcttcagagtccaccagtttgaaaagatcgagcag 262 ||||||||| | || ||||||||||| |||||||||||| Sbjct: 1011 ggcatcttccgtgtgcaccagtttgagaagatcgagcag 1049
>ref|XM_806881.1| Trypanosoma cruzi strain CL Brener seryl-tRNA synthetase (Tc00.1047053506777.80) partial mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.080 Identities = 44/51 (86%) Strand = Plus / Plus Query: 35 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtat 85 ||||| |||||||| | ||||||||||| |||||||| ||||| |||||| Sbjct: 730 caattcgatgaggaattgtacaaagtaacgggtgacggtgaggaaaagtat 780
>emb|AJ719509.1| Gallus gallus mRNA for hypothetical protein, clone 2o24 Length = 1883 Score = 46.1 bits (23), Expect = 0.080 Identities = 35/39 (89%) Strand = Plus / Plus Query: 224 ggcatcttcagagtccaccagtttgaaaagatcgagcag 262 ||||||||| | || ||||||||||| |||||||||||| Sbjct: 1011 ggcatcttccgtgtgcaccagtttgagaagatcgagcag 1049
>ref|XM_677044.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8867.2), mRNA Length = 1425 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 caatttgatgaggagctctacaaagt 60 |||||||||||||| ||||||||||| Sbjct: 652 caatttgatgaggaactctacaaagt 677
>ref|XM_645587.1| Entamoeba histolytica HM-1:IMSS seryl-tRNA synthetase (204.t00006) partial mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 296 tgggaaatgcatgaggagatgattaaaaat 325 |||||||||||||| || |||||||||||| Sbjct: 916 tgggaaatgcatgaagaaatgattaaaaat 945
>emb|X55704.1|PPLPD P.putida LPD-3 gene for lipoamide dehydrogenase Length = 4941 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 aggtgatcgaatttatcctgc 147 ||||||||||||||||||||| Sbjct: 2770 aggtgatcgaatttatcctgc 2790
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 aaatcatggcaaaatgtgccc 26 ||||||||||||||||||||| Sbjct: 43161 aaatcatggcaaaatgtgccc 43181
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 230 ttcagagtccaccagtttgaaaagatcgagcag 262 ||||| |||||||||||||| ||||| |||||| Sbjct: 93768 ttcagggtccaccagtttgagaagattgagcag 93736
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 attaaaaatgcagaagattt 336 |||||||||||||||||||| Sbjct: 330698 attaaaaatgcagaagattt 330679
>ref|NM_026231.2| Mus musculus glutathione S-transferase, C-terminal domain containing (Gstcd), mRNA Length = 2633 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1895 ctgcagatttgccgatcaga 1914
>gb|BC061240.1| Mus musculus glutathione S-transferase, C-terminal domain containing, mRNA (cDNA clone MGC:74393 IMAGE:6743615), complete cds Length = 2423 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1891 ctgcagatttgccgatcaga 1910
>gb|BC047136.1| Mus musculus glutathione S-transferase, C-terminal domain containing, mRNA (cDNA clone MGC:54872 IMAGE:6311866), complete cds Length = 2633 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1895 ctgcagatttgccgatcaga 1914
>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence Length = 200807 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 tgaggagatgattaaaaatgcaga 330 ||||||||| |||||||||||||| Sbjct: 137530 tgaggagattattaaaaatgcaga 137507
>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agctggcatcttcagagtcc 239 |||||||||||||||||||| Sbjct: 28140 agctggcatcttcagagtcc 28159
>emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chromosome X Contains the 3' end of a novel gene (C6.1A) and a phosphatidylinositol binding clathrin assembly protein (PICALM) pseudogene, complete sequence Length = 74649 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 attaaaaatgcagaagattt 336 |||||||||||||||||||| Sbjct: 23827 attaaaaatgcagaagattt 23846
>emb|AL139190.9| Human DNA sequence from clone RP11-34M7 on chromosome 6, complete sequence Length = 48119 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gaatttatcctgcagatttg 154 |||||||||||||||||||| Sbjct: 32736 gaatttatcctgcagatttg 32717
>gb|AC164250.4| Mus musculus BAC RP24-327O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221612 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 313 gatgattaaaaatgcagaagatttttatcagg 344 ||||||||||||||| ||| |||||| ||||| Sbjct: 141177 gatgattaaaaatgctgaacatttttttcagg 141146
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 catcggagcaaccgctatgt 115 |||||||||||||||||||| Sbjct: 72498 catcggagcaaccgctatgt 72479
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence Length = 198897 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tggcaaaatgtgcccagttg 31 |||||||||||||||||||| Sbjct: 6031 tggcaaaatgtgcccagttg 6050
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgattaaaaatgcagaagat 334 |||||||||||||||||||| Sbjct: 922695 tgattaaaaatgcagaagat 922714
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tggcaaaatgtgcccagttg 31 |||||||||||||||||||| Sbjct: 124990 tggcaaaatgtgcccagttg 125009
>dbj|AK017059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933434L15 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1170 ctgcagatttgccgatcaga 1189
>dbj|AK013967.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001N19 product:hypothetical SAM (and some other nucleotide) binding motif containing protein, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 747 ctgcagatttgccgatcaga 766
>dbj|AK029724.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930511A03 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 2393 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1896 ctgcagatttgccgatcaga 1915
>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence Length = 188292 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tgaggagatgattaaaaatg 326 |||||||||||||||||||| Sbjct: 31204 tgaggagatgattaaaaatg 31185
>dbj|AK020021.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830430H09 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 2224 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1505 ctgcagatttgccgatcaga 1524
>dbj|AK033409.1| Mus musculus 11 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:8530402F04 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 3455 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 1934 ctgcagatttgccgatcaga 1953
>emb|BX890566.8| Mouse DNA sequence from clone RP23-342I1 on chromosome X, complete sequence Length = 173737 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctgggaaatgcatgaggaga 314 |||||||||||||||||||| Sbjct: 85155 ctgggaaatgcatgaggaga 85174
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 tctgtgccacaaatccaaatgaca 287 ||||||||||||||||||| |||| Sbjct: 72341 tctgtgccacaaatccaaaagaca 72318
>gb|AC129948.3| Branchiostoma floridae, clone -33B4, complete sequence Length = 66265 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tgggaaatgcatgaggagat 315 |||||||||||||||||||| Sbjct: 35808 tgggaaatgcatgaggagat 35789
>emb|BX548004.7| Mouse DNA sequence from clone RP23-334I1 on chromosome X, complete sequence Length = 107181 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctgggaaatgcatgaggaga 314 |||||||||||||||||||| Sbjct: 97458 ctgggaaatgcatgaggaga 97439
>gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, complete sequence Length = 167510 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agctggcatcttcagagtcc 239 |||||||||||||||||||| Sbjct: 118415 agctggcatcttcagagtcc 118434
>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete sequence Length = 173847 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 attaaaaatgcagaagattt 336 |||||||||||||||||||| Sbjct: 148835 attaaaaatgcagaagattt 148816
>emb|CT033779.9| Mouse DNA sequence from clone RP24-230F21 on chromosome 9, complete sequence Length = 161997 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 313 gatgattaaaaatgcagaagatttttatcagg 344 |||||||||||||| |||| |||||| ||||| Sbjct: 81648 gatgattaaaaatgtagaacatttttctcagg 81617
>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete sequence Length = 117521 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 attaaaaatgcagaagattt 336 |||||||||||||||||||| Sbjct: 67209 attaaaaatgcagaagattt 67190
>gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, complete sequence Length = 185517 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 gatgattaaaaatgcagaagatttttatcagg 344 ||||||||||||||| ||| |||||| ||||| Sbjct: 167183 gatgattaaaaatgctgaacatttttttcagg 167214
>gb|AC124593.4| Mus musculus BAC clone RP23-10D15 from 3, complete sequence Length = 187362 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctgcagatttgccgatcaga 163 |||||||||||||||||||| Sbjct: 50389 ctgcagatttgccgatcaga 50370
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 313 gatgattaaaaatgcagaagatttttatcagg 344 |||||||||||||| |||| |||||| ||||| Sbjct: 13879 gatgattaaaaatgtagaacatttttctcagg 13848
>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 103601 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 atgaggagatgattaaaaat 325 |||||||||||||||||||| Sbjct: 52642 atgaggagatgattaaaaat 52623 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,115,593 Number of Sequences: 3902068 Number of extensions: 3115593 Number of successful extensions: 53205 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53052 Number of HSP's gapped (non-prelim): 153 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)