>STSYN_PEA (Q93XK2) Stachyose synthase precursor (EC 2.4.1.67)|
           (Galactinol--raffinose galactosyltransferase)
          Length = 853

 Score =  114 bits (284), Expect = 3e-25
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
 Frame = +2

Query: 71  SPGNVANLRDVAMDSLEKYGVGIIDPEKIYEFYNDQHNYLXXXXXXXXXXXXQNVMETLG 250
           SPG    + D+A+  + K  +G++ P +  E Y+  H+YL             + +E + 
Sbjct: 431 SPGLDGTMEDLAVVEISKASLGLVHPSQANELYDSMHSYLAESGITGVKVDVIHSLEYVC 490

Query: 251 HGFGGRVALSRKYQHALEESIARNFKRNNLICCMCHSSDHIYSALKS-AVARASEDFMPQ 427
             +GGRV L++ Y   L +SI +NF  N +I  M H +D  +   K  ++ R  +DF  Q
Sbjct: 491 DEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQ 550

Query: 428 EPA--------LQTLHIANVAFNSLLLGEIFIPDWDMFQSKHETAEFHGAARALSGG 574
           +P         LQ +H+ + ++NSL +G++  PDWDMFQS H  A+FH  +RA+ GG
Sbjct: 551 DPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGG 607

>AGAL_SULSO (Q97U94) Alpha-galactosidase (EC 3.2.1.22) (Alpha-Gal)|
          Length = 648

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 37/99 (37%), Positives = 51/99 (51%)
 Frame = +2

Query: 278 SRKYQHALEESIARNFKRNNLICCMCHSSDHIYSALKSAVARASEDFMPQEPALQTLHIA 457
           SR  Q AL+ S+ ++     +I CM  + ++  +   S V R S D++P       LHI 
Sbjct: 385 SRNIQIALQYSVGKD-----VINCMSMNPENYCNYFYSNVMRNSIDYVPFWKDGTKLHIM 439

Query: 458 NVAFNSLLLGEIFIPDWDMFQSKHETAEFHGAARALSGG 574
             A+NSLL   I  PD+DMF S    A+ H  AR  SGG
Sbjct: 440 FNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVFSGG 478

>HIF1A_ONCMY (Q98SW2) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1|
           alpha)
          Length = 766

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
 Frame = -1

Query: 185 NCADHCRIHISSQDQ*YPLHISPSCPWL--------HPSNLQ 84
           +C+DH R+H S  +Q    H  PS P+L        HPSN++
Sbjct: 195 HCSDHVRVHESPAEQIPGGHKEPSVPYLVLVCDPIPHPSNIE 236

>V_SV41 (P36315) Nonstructural protein V|
          Length = 225

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 F*CGCGWCESRCAKCDGDS 246
           F C CG C  RC +C+GD+
Sbjct: 207 FSCTCGTCPDRCGECEGDN 225

>BRCA2_MOUSE (P97929) Breast cancer type 2 susceptibility protein homolog (Fanconi|
            anemia group D1 protein homolog)
          Length = 3329

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 299  LEESIARNFKRNNLICCMCHSSDHIYSALKSAVARASED 415
            ++E+I  N ++N  ICC+C SS  +     SA+A  +ED
Sbjct: 1598 VQENIENNVEKNPRICCICQSSYPVTE--DSALAYYTED 1634

>CAPP_STRA5 (Q8E0H2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 931

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 240 RLSGM--ASVVVLHYLESINMLLRNLLLGIS 326
           RLS M  + V++ HY+E +N L RN+ L I+
Sbjct: 263 RLSAMVQSEVIINHYIEQLNELYRNMSLSIN 293

>CAPP_STRA3 (Q8E647) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 931

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 240 RLSGM--ASVVVLHYLESINMLLRNLLLGIS 326
           RLS M  + V++ HY+E +N L RN+ L I+
Sbjct: 263 RLSAMVQSEVIINHYIEQLNELYRNMSLSIN 293

>YGRB_BACPF (Q45130) Hypothetical 12.6 kDa protein in grpA 5'region (ORFB)|
          Length = 108

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -2

Query: 223 IYFHTIHTHTRKVIVLIIVEFIYLLRINDTHS------IFLQAVHGYIPQICNI 80
           I+  + ++ T+KV+ ++ + F++LL++N T        +F   V G    +C +
Sbjct: 23  IFNDSKYSKTKKVLAIMFITFVFLLQVNGTDKMIGFIFVFTGTVIGVTYSVCKL 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,272,329
Number of Sequences: 219361
Number of extensions: 1614520
Number of successful extensions: 4366
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4365
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)