>Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980|
          Length = 446

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 22/81 (27%), Positives = 41/81 (50%)
 Frame = +1

Query: 106 PSRDEAERLHGALKKCRIRHFRDKGHKILLEDGFDLATSIKGSTYYRRSRQTDFVLDYLP 285
           P+ D A+ L   +KK R++  + + H    + G++++  + GST      Q   V D+  
Sbjct: 345 PAADLADDLPEEVKKQRLQILQSRIH----QQGYEISRRMVGST------QRILVTDFSK 394

Query: 286 PTPDELEKAIDHNRLLNFATD 348
             P  L+   ++NR++NF  D
Sbjct: 395 KDPGMLQGRTENNRIVNFRCD 415

>MHPC_ECOLI (P77044) 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC|
           3.7.1.-)
          Length = 293

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 46  RLHAVKAQTLVIASGNDELLPSRDEAERLHGALKKCRIRHFRDKGH 183
           RL  +KAQTL++   ND  +P  D   RL   +    +  FRD GH
Sbjct: 228 RLAEIKAQTLIVWGRNDRFVP-MDAGLRLLSGIAGSELHIFRDCGH 272

>LEU21_DEIRA (Q9RTY9) 3-isopropylmalate dehydratase large subunit 1 (EC|
           4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
           isomerase 1) (IPMI 1)
          Length = 434

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +1

Query: 178 GHKILLEDGFDLATSIKGSTYYRRSRQTDFVLDYLPP---TPDELEKAIDHNRLLNFATD 348
           G +IL + G+D+   +        +R+ +  L  L P    P E++   D   L     D
Sbjct: 242 GGEILTDYGYDVPAWVYPDEGAAYAREVEIDLSALHPRMSAPSEVDNVHDVAELRGLKVD 301

Query: 349 PVMLSTLTDGRI 384
            V + T T+GRI
Sbjct: 302 QVFIGTCTNGRI 313

>Y4XJ_RHISN (P55702) Hypothetical 44.3 kDa protein y4xJ|
          Length = 423

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -1

Query: 464 PSSNPMSMWYPTSKTGPSLGIP----ASPLTILPSVSVD 360
           P SNP  M  PT +  P+LG P    A+  T  PSV  D
Sbjct: 379 PGSNPNQMSAPTDRMAPALGTPPRARAAISTDAPSVKGD 417

>PIP_THEAC (P96084) Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl|
           aminopeptidase) (PAP) (Tricorn protease-interacting
           factor F1)
          Length = 293

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +1

Query: 37  VNSRLHAVKAQTLVIASGNDELLPSRDEAERLHGALKKCRIRHFRDKGHKILLED 201
           +  ++ A+K  TL+     DE+ P  + A  +H  +    +  FRD  H  + ED
Sbjct: 225 ITDKISAIKIPTLITVGEYDEVTP--NVARVIHEKIAGSELHVFRDCSHLTMWED 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,902,335
Number of Sequences: 219361
Number of extensions: 1346367
Number of successful extensions: 3172
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)