| Clone Name | rbasdj04 |
|---|---|
| Clone Library Name | barley_pub |
>AMGO1_MOUSE (Q80ZD8) Amphoterin-induced protein 1 precursor (Alivin-2)| Length = 492 Score = 32.7 bits (73), Expect = 0.93 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Frame = +3 Query: 30 RRGDLTFP-------GIYTCPSMGALQTWSSSADLQIYNLTKMGENNGRRHIFT 170 R GDL F G+YTC +MG + S +L++YN T G ++ +T Sbjct: 321 RNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNTAYT 374
>AMGO1_RAT (Q80ZD7) Amphoterin-induced protein 1 precursor (Alivin-2)| Length = 493 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 54 GIYTCPSMGALQTWSSSADLQIYNLTKMGENNGRRHIFT 170 G+YTC +MG + S +L++YN T G ++ +T Sbjct: 337 GVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNTAYT 375
>ADPGK_MOUSE (Q8VDL4) ADP-dependent glucokinase (EC 2.7.1.147) (ADPGK) (ADP-GK)| Length = 496 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 19 SCQEEEETSLFPEYTLAHQWGPYK 90 S QEE+E L EY +WGP+K Sbjct: 199 SLQEEDEFHLILEYLAGEEWGPFK 222
>COBS_PSEPK (Q88M93) Cobalamin synthase (EC 2.-.-.-)| Length = 240 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/86 (26%), Positives = 37/86 (43%) Frame = -1 Query: 638 LRGKGEFLGILVCNHFCRPAQGLFSPLVAPKAQHDDGSLDLILVHGSGRLRLFCFFVAYQ 459 L G+ LG+ +C + RP GL L + G + L+ V LFC F+ Sbjct: 142 LIGRAAMLGLFLCTPYVRPG-GLGQALAEHMPRRAAGWVLLVCV-------LFCLFLG-- 191 Query: 458 FCWHLLLPFVEYVKVKQVKIRPVGST 381 W +LL + ++ + R +G T Sbjct: 192 -GWSVLLALAVFAWLRHLMCRRLGGT 216
>CERK1_HUMAN (Q8TCT0) Ceramide kinase (EC 2.7.1.138) (Acylsphingosine kinase)| (hCERK) (Lipid kinase 4) (LK4) Length = 537 Score = 29.6 bits (65), Expect = 7.9 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%) Frame = -1 Query: 626 GEFLGILVCNHFC---RPAQGLFSPLVAPKAQHDDGSLDLILVHGSGRLRLFCFFVAY-- 462 G+FL I N C R +GL +P A DGS DLIL+ R F + + Sbjct: 386 GKFLAINATNMSCACRRSPRGL-----SPAAHLGDGSSDLILIRKCSRFNFLRFLIRHTN 440 Query: 461 ---QFCWHLLLPFVEYVKVKQ 408 QF + FVE +VK+ Sbjct: 441 QQDQFDF----TFVEVYRVKK 457 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,057,393 Number of Sequences: 219361 Number of extensions: 2478189 Number of successful extensions: 6349 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6346 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)