ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdi23 |
|---|---|
| Clone Library Name | barley_pub |
>EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst complex component| Sec10) Length = 829 Score = 255 bits (652), Expect = 8e-68 Identities = 124/156 (79%), Positives = 143/156 (91%) Frame = -2 Query: 709 SEQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMH 530 SEQK+TDYRSPDDG A DHRPTNACIR+VAYLSRVLE AF+ALEGLNKQ+FLTELGNR+ Sbjct: 669 SEQKSTDYRSPDDGIASDHRPTNACIRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLE 728 Query: 529 KGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESL 350 K LL HWQKFTF+PSGGLRLKRD+ EY FV+SF APS+DEKFELLGI+ANVFIVAP+SL Sbjct: 729 KLLLTHWQKFTFNPSGGLRLKRDLNEYVGFVKSFGAPSVDEKFELLGIIANVFIVAPDSL 788 Query: 349 ASLFEGTPSIRKDALRFIQLRDDYKTAKIASMLNSI 242 +LFEG+PSIRKDA RFIQLR+DYK+AK+A+ L+S+ Sbjct: 789 PTLFEGSPSIRKDAQRFIQLREDYKSAKLATKLSSL 824
>EXOC5_HUMAN (O00471) Exocyst complex component 5 (Exocyst complex component| Sec10) (hSec10) Length = 708 Score = 93.2 bits (230), Expect = 7e-19 Identities = 50/153 (32%), Positives = 92/153 (60%), Gaps = 3/153 (1%) Frame = -2 Query: 709 SEQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMH 530 +EQK TD++ P+D + TNAC+++ AY+ + +E ++++G N + L ELG R H Sbjct: 553 AEQKKTDFK-PEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFH 611 Query: 529 KGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESL 350 + + H Q++++S GG+ D+ EY + + F P + F+ L + N+ +VAP++L Sbjct: 612 RLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNL 671 Query: 349 ASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 260 + G ++ K+ L F+QLR DY++A++A Sbjct: 672 KQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704
>EXOC5_RAT (P97878) Exocyst complex component 5 (Exocyst complex component| Sec10) (71 kDa component of rsec6/8 secretory complex) (p71) Length = 708 Score = 92.0 bits (227), Expect = 2e-18 Identities = 50/153 (32%), Positives = 91/153 (59%), Gaps = 3/153 (1%) Frame = -2 Query: 709 SEQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMH 530 +EQK TD++ P+D + TNAC+++ AY+ + +E ++++G N + L ELG R H Sbjct: 553 AEQKKTDFK-PEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFH 611 Query: 529 KGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESL 350 + H Q++++S GG+ D+ EY + + F P + F+ L + N+ +VAP++L Sbjct: 612 RLTYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNL 671 Query: 349 ASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 260 + G ++ K+ L F+QLR DY++A++A Sbjct: 672 KQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704
>EXOC5_MOUSE (Q3TPX4) Exocyst complex component 5 (Exocyst complex component| Sec10) Length = 708 Score = 89.0 bits (219), Expect = 1e-17 Identities = 48/153 (31%), Positives = 90/153 (58%), Gaps = 3/153 (1%) Frame = -2 Query: 709 SEQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMH 530 +EQK TD++ P+D + TNAC+++ Y+ + +E ++++G N + L ELG R H Sbjct: 553 AEQKKTDFK-PEDENNVLIQYTNACVKVCVYVRKQVEKIKNSMDGKNVDTVLMELGVRFH 611 Query: 529 KGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESL 350 + + H Q++++S G + D+ EY + + F P + F+ L + N+ +VAP++L Sbjct: 612 RLIYEHLQQYSYSCMGDMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNL 671 Query: 349 ASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 260 + G ++ K+ L F+QLR DY++A++A Sbjct: 672 KQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704
>EXOC5_DROME (Q9XTM1) Exocyst complex component 5 (Exocyst complex component| Sec10) Length = 710 Score = 84.3 bits (207), Expect = 3e-16 Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Frame = -2 Query: 706 EQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHK 527 EQK TDY+ D D + AC+++V L V+ ++G N Q+ LTE G R+H+ Sbjct: 554 EQKKTDYKPETD---VDTISSAACLQVVQNLQPVIVQIKKCVDGENLQNVLTEFGTRLHR 610 Query: 526 GLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLA 347 + +H Q F+ +G + D+ EY + +R ++P + + F++L + N+ +V P++L Sbjct: 611 VIYDHLQTMQFNTAGAMCAICDVNEYRKCIRELDSPLVTQLFDILHALCNLLLVKPQNLQ 670 Query: 346 SLFEGTP--SIRKDALR-FIQLRDDYKTAKIASMLNSIM 239 + G + K +R FIQLR D++ K + L I+ Sbjct: 671 EVCTGDTLNYLDKSVVRQFIQLRTDFRIIKNTNYLKGII 709
>SEC10_YEAST (Q06245) Exocyst complex component SEC10| Length = 871 Score = 64.3 bits (155), Expect = 3e-10 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Frame = -2 Query: 646 TNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLK 467 T I IV L+ + E + L+G N Q+FLT +G ++ LL+H+ F + GG+ + Sbjct: 732 TLPAIEIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGLLLSHYSHFQVNSIGGVVVT 791 Query: 466 RDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLASLF-EG-TPSIRKDALR-FI 296 +DI Y + + S+ +KF L +AN+F V PE L SL EG I +D ++ +I Sbjct: 792 KDIIGYQTAIEDWGVASLIDKFATLRELANLFTVQPELLESLTKEGHLADIGRDIIQSYI 851 Query: 295 QLRDDY 278 R+D+ Sbjct: 852 SNREDF 857
>EXOC5_CAEEL (Q18406) Probable exocyst complex component 5 (Exocyst complex| component Sec10) Length = 659 Score = 56.6 bits (135), Expect = 7e-08 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 5/153 (3%) Frame = -2 Query: 709 SEQKATDYRSPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMH 530 SEQK TD+R D D R + C +L+ + +G N ++ ++L R+ Sbjct: 507 SEQKKTDFRP--DSQQIDIRVSPQCQLASRFLANQVAAMELGCDGENLEALQSDLATRLF 564 Query: 529 KGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESL 350 K +L H Q+FT++ +G + L D+ E V + + ++E L + N+ V P+ + Sbjct: 565 KFMLTHIQQFTYNSTGAVLLLCDVGELRTLVSKWRVQNALTQWESLQALTNLLAVLPDQV 624 Query: 349 -----ASLFEGTPSIRKDALRFIQLRDDYKTAK 266 +SL E R+ F++LR D+++ K Sbjct: 625 NETAHSSLLENVD--RQLIHDFVRLRTDFRSIK 655
>POF6_SCHPO (O74854) F-box protein pof6| Length = 872 Score = 44.3 bits (103), Expect = 4e-04 Identities = 27/95 (28%), Positives = 45/95 (47%) Frame = -2 Query: 649 PTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRL 470 PT A +V +L + + + F E+G R+ L + + FS GGL+L Sbjct: 722 PTAAAKNVVQFLGFHMRILVGRADHEILDVFYKEVGMRLFDSLTRYIKSHKFSVDGGLKL 781 Query: 469 KRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIV 365 D Y EF+ S + S+ F+ L +A++FI+ Sbjct: 782 LSDCNLYYEFIHSLHQSSLLPYFKTLKEIAHLFII 816
>RCY1_YEAST (P39531) Recyclin-1| Length = 840 Score = 33.5 bits (75), Expect = 0.66 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = -2 Query: 703 QKATDYRSPD---DGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRM 533 Q DY P + D +PT IR+V LS + A + + E+G R Sbjct: 665 QLPDDYNPPPPSRNSPIRDIKPTKCAIRVVELLSNHCFLLTGATDKGTIDVYQQEIGERF 724 Query: 532 HKGLLNHWQKFTFSPSGGLRLKRDITEYGEFV 437 ++ H +K S G + L D+ + +F+ Sbjct: 725 FNEIVKHLKKCFISTEGAIWLICDLNYFYDFI 756
>PUR5_ENTFA (Q833Z1) Phosphoribosylformylglycinamidine cyclo-ligase (EC| 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) Length = 343 Score = 31.2 bits (69), Expect = 3.3 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +2 Query: 428 EATDKLPILSNVTFQP*PTTRTK---RELLPMIKKALVHAVSQFSQKG 562 + TDKLP L+ T T TK +ELLP++K LVH + + G Sbjct: 205 KTTDKLPELAPKTLGEELLTPTKIYVKELLPLLKAGLVHGAAHITGGG 252
>ZEA9_MAIZE (P06677) Zein-alpha precursor (19 kDa) (Clone 19C2)| Length = 240 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 640 ACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKR 464 A + AYL + + + FS L N+ SFLT+ + LL +Q+F +P+ L+L++ Sbjct: 162 AALNPAAYLQQQILLPFSQLAAANRASFLTQ------QQLLPFYQQFAANPATLLQLQQ 214
>ZEA8_MAIZE (P06676) Zein-alpha precursor (19 kDa) (Clone 19C1)| Length = 240 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 640 ACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKR 464 A + AYL + + + FS L N+ SFLT+ + LL +Q+F +P+ L+L++ Sbjct: 162 AALNPAAYLQQQILLPFSQLAAANRASFLTQ------QQLLPFYQQFAANPATLLQLQQ 214
>ZEA7_MAIZE (P04703) Zein-alpha precursor (19 kDa) (Clone A20)| Length = 240 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 640 ACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKR 464 A + AYL + + + FS L N+ SFLT+ + LL +Q+F +P+ L+L++ Sbjct: 162 AALNPAAYLQQQILLPFSQLAAANRASFLTQ------QQLLPFYQQFAANPATLLQLQQ 214
>PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5| Length = 1413 Score = 30.4 bits (67), Expect = 5.6 Identities = 17/62 (27%), Positives = 34/62 (54%) Frame = -2 Query: 421 PSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYKTAKIASMLNSI 242 PSI+ ++E LG+ A +V ++L +L+ + D L+ +R + KI + ++ I Sbjct: 102 PSIEVRYEHLGVEAACEVVEGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGI 161 Query: 241 MS 236 +S Sbjct: 162 IS 163
>OPN3_MOUSE (Q9WUK7) Opsin-3 (Encephalopsin) (Panopsin)| Length = 400 Score = 30.4 bits (67), Expect = 5.6 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 136 IIELHYYVNSFGSLCFSVSNFFLACWILVVHVWVYEILVANGY 8 +I++ Y +CF ++ FL CW+ + V LV NGY Sbjct: 241 VIKMLRYEKKVAKMCFLMAFVFLTCWMPYI---VTRFLVVNGY 280
>ZEA6_MAIZE (P04702) Zein-alpha precursor (19 kDa) (Clone M6)| Length = 240 Score = 30.4 bits (67), Expect = 5.6 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 640 ACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKR 464 A + AYL + + + FS L N+ SFLT+ + LL +Q+F +P+ L+L++ Sbjct: 162 AALNPAAYLQQQILLPFSQLAAANRASFLTQ------QQLLLFYQQFAANPATLLQLQQ 214
>SRA31_CAEEL (Q18881) Serpentine receptor class alpha-31 (Protein sra-31)| Length = 338 Score = 29.6 bits (65), Expect = 9.5 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = -2 Query: 163 SILTISVACIIE--LHYYVNSFGSLCFSVSNFF 71 SIL S C+IE L+YY N F SLC +S FF Sbjct: 94 SILFQSSECLIESNLYYYTNLFSSLC-CISLFF 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,467,507 Number of Sequences: 219361 Number of extensions: 1939643 Number of successful extensions: 4231 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4228 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
