ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdh02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
2ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group... 145 2e-31
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
6dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
7gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20... 143 9e-31
8dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
9ref|NM_187986.1| Oryza sativa (japonica cultivar-group), Ozsa840... 56 2e-04
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
11dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
12gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete... 48 0.038
13gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome... 48 0.038
14gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC... 48 0.038
15dbj|D10737.1|CHKRPL5G Chiken ribosomal protein L5 gene, complete... 46 0.15
16ref|NM_125637.2| Arabidopsis thaliana CDF1 (CYCLING DOF FACTOR 1... 44 0.59
17gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
18gb|AY143830.1| Arabidopsis thaliana At5g62430/K19B1_4 mRNA, comp... 44 0.59
19gb|AF446362.1|AF446362 Arabidopsis thaliana AT5g62430/K19B1_4 mR... 44 0.59
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
21dbj|AB231333.1| Arabidopsis thaliana CDF1 mRNA for cyclic dof fa... 44 0.59
22dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.59
23gb|AC005355.1| Homo sapiens chromosome 5, P1 clone 1307e8 (LBNL ... 42 2.3
24gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, comp... 42 2.3
25emb|AL672045.11| Human DNA sequence from clone RP11-577O19 on ch... 42 2.3
26ref|XM_505415.1| Yarrowia lipolytica CLIB122, YALI0F14487g predi... 42 2.3
27gb|AC131953.1| Homo sapiens BAC clone RP11-632F7 from 4, complet... 42 2.3
28gb|AC092170.3| Homo sapiens BAC clone RP11-814G20 from 2, comple... 42 2.3
29dbj|AP001025.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 2.3
30dbj|AP000793.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.3
31emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.3
32gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, comp... 40 9.2
33ref|XM_414523.1| PREDICTED: Gallus gallus similar to coagulation... 40 9.2
34gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
35gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complet... 40 9.2
36gb|DQ138136.1| Muju virus isolate 97-32 nucleocapsid protein (N)... 40 9.2
37emb|Z68287.1|HSN38E12 Human DNA sequence from clone LL22NC03-38E... 40 9.2
38emb|AL391538.11| Human DNA sequence from clone RP11-334H12 on ch... 40 9.2
39emb|AL392103.6| Human DNA sequence from clone RP11-477L16 on chr... 40 9.2
40emb|AL035423.4|HS20I3 Human DNA sequence from clone RP1-20I3 on ... 40 9.2
41emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4,... 40 9.2
42emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4,... 40 9.2
43gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosom... 40 9.2
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
45gb|AC015574.8|AC015574 Homo sapiens, clone RP11-44B21, complete ... 40 9.2
46gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, comple... 40 9.2
47gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete... 40 9.2
48emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, c... 40 9.2
49gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, comple... 40 9.2
50gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome... 40 9.2 
>ref|XM_479581.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1803

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
            ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 1493 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 1434

                                                                        
Query: 250  ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
            |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 1433 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 1374

                                                                        
Query: 310  tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
            ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 1373 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 1314

                                                                        
Query: 370  cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
            | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 1313 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 1254

                                                                        
Query: 430  cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
            |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 1253 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 1194

                                                                        
Query: 490  tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
            ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 1193 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 1134

                                                         
Query: 550  tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1133 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 1089
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>ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060O17.31
            mRNA
          Length = 1849

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
            ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 1502 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 1443

                                                                        
Query: 250  ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
            |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 1442 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 1383

                                                                        
Query: 310  tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
            ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 1382 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 1323

                                                                        
Query: 370  cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
            | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 1322 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 1263

                                                                        
Query: 430  cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
            |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 1262 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 1203

                                                                        
Query: 490  tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
            ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 1202 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 1143

                                                         
Query: 550  tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1142 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 1098
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Plus

                                                                            
Query: 190      atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
                ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 29023978 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 29024037

                                                                            
Query: 250      ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
                |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 29024038 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 29024097

                                                                            
Query: 310      tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
                ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 29024098 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 29024157

                                                                            
Query: 370      cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
                | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 29024158 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 29024217

                                                                            
Query: 430      cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
                |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 29024218 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 29024277

                                                                            
Query: 490      tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
                ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 29024278 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 29024337

                                                             
Query: 550      tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
                ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 29024338 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 29024382
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0060O17
          Length = 180015

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Plus

                                                                          
Query: 190    atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
              ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 141515 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 141574

                                                                          
Query: 250    ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
              |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 141575 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 141634

                                                                          
Query: 310    tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
              ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 141635 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 141694

                                                                          
Query: 370    cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
              | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 141695 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 141754

                                                                          
Query: 430    cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
              |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 141755 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 141814

                                                                          
Query: 490    tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
              ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 141815 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 141874

                                                           
Query: 550    tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
              ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 141875 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 141919
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>dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H10, full
            insert sequence
          Length = 1767

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
            ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 1501 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 1442

                                                                        
Query: 250  ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
            |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 1441 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 1382

                                                                        
Query: 310  tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
            ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 1381 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 1322

                                                                        
Query: 370  cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
            | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 1321 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 1262

                                                                        
Query: 430  cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
            |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 1261 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 1202

                                                                        
Query: 490  tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
            ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 1201 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 1142

                                                         
Query: 550  tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1141 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 1097
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>dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E07, full
            insert sequence
          Length = 1803

 Score =  145 bits (73), Expect = 2e-31
 Identities = 322/405 (79%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatga 249
            ||||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| ||
Sbjct: 1493 atcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcagga 1434

                                                                        
Query: 250  ctcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaaca 309
            |||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| ||||
Sbjct: 1433 ctcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaaca 1374

                                                                        
Query: 310  tgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgt 369
            ||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 1373 tgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgt 1314

                                                                        
Query: 370  cggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccac 429
            | || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | |
Sbjct: 1313 caggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctc 1254

                                                                        
Query: 430  cttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatg 489
            |||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||||||
Sbjct: 1253 cttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatg 1194

                                                                        
Query: 490  tactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgc 549
            ||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| ||
Sbjct: 1193 tactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagc 1134

                                                         
Query: 550  tccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            ||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1133 tccatgcaccatttggccagggagaaatgaagggccaaactgaag 1089
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>gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20587 AOBP-like
            protein mRNA, complete cds
          Length = 1431

 Score =  143 bits (72), Expect = 9e-31
 Identities = 321/404 (79%)
 Strand = Plus / Minus

                                                                        
Query: 191  tcacgtcgtctcctggaaagactcaaagcgggattgagccgcagggttcgcttgcatgac 250
            |||||| |||||||||||||| | | | || ||| |||| || || ||||| |||| |||
Sbjct: 1431 tcacgttgtctcctggaaagattgagatcgagatagagctgctggattcgcctgcaggac 1372

                                                                        
Query: 251  tcgggctgcgttggacatctgctccctgccaccagatttctgctggaacggtctaaacat 310
            ||| || ||   ||| |||||||||||||   ||| ||||  |||||| | ||| |||||
Sbjct: 1371 tcgtgcagcaccggatatctgctccctgctttcaggtttcgactggaatgatctgaacat 1312

                                                                        
Query: 311  gccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagcttcgtc 370
            || ||| || || |||||||| || ||||| |||||||| || |||||||||||||||||
Sbjct: 1311 gctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagcttcgtc 1252

                                                                        
Query: 371  ggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctcaccacc 430
             || ||||| ||||| || || || ||||||||||||  ||| |||||||| ||| | ||
Sbjct: 1251 aggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtcatctcc 1192

                                                                        
Query: 431  ttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaacatgt 490
            ||| || |  || ||||| | ||| || || ||||| ||||| ||  | |||||||||||
Sbjct: 1191 ttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaacatgt 1132

                                                                        
Query: 491  actagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggcgcgct 550
            |||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||| |||
Sbjct: 1131 actagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggcgagct 1072

                                                        
Query: 551  ccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            |||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1071 ccatgcaccatttggccagggagaaatgaagggccaaactgaag 1028
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>dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041J16, full
            insert sequence
          Length = 1847

 Score =  129 bits (65), Expect = 1e-26
 Identities = 233/289 (80%)
 Strand = Plus / Minus

                                                                        
Query: 306  aacatgccacgctcgccgggttcaatccccagggtggtccagatcgaactctttgcagct 365
            ||||||| ||| || || |||||||| || ||||| |||||||| || ||||||||||||
Sbjct: 1385 aacatgctacggtcaccaggttcaatgccaagggttgtccagattgagctctttgcagct 1326

                                                                        
Query: 366  tcgtcggggtcatcaatccggagtgtcttgggaatccacaaggatttttctgccttctca 425
            ||||| || ||||| ||||| || || || ||||||||||||  ||| |||||||| |||
Sbjct: 1325 tcgtcaggatcatcgatccgaagcgttttcggaatccacaagtttttctctgccttgtca 1266

                                                                        
Query: 426  ccaccttgtggatcagaatccctagggtgtttgccaaggactggagaaccactatctgaa 485
             | ||||| || |  || ||||| | ||| || || ||||| ||||| ||  | ||||||
Sbjct: 1265 tctccttgcggtttggagtccctggagtgctttcctaggacaggagagccgttgtctgaa 1206

                                                                        
Query: 486  catgtactagtgcttgttggaggtgctgctgacatgttataactaggtccaagccatggc 545
            ||||||||||||||||| |||| ||  ||||||| | |  || |||||  || |||||||
Sbjct: 1205 catgtactagtgcttgtaggagatgaagctgacacgctgcaattaggttgaatccatggc 1146

                                                             
Query: 546  gcgctccatgcaccattaggccaaggagaaaccaatggccaaacggaag 594
            | ||||||||||||||| ||||| |||||||  || |||||||| ||||
Sbjct: 1145 gagctccatgcaccatttggccagggagaaatgaagggccaaactgaag 1097
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>ref|NM_187986.1| Oryza sativa (japonica cultivar-group), Ozsa8406 predicted mRNA
          Length = 1263

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                        
Query: 330  atccccagggtggtccagatcgaactctttgcagcttcgtcggggtcatcaatccggagt 389
            ||||||||||||| |||||| || ||||| || || |||||||| || || || ||||| 
Sbjct: 1115 atccccagggtggcccagatggagctcttcgccgcctcgtcgggatcgtcgatgcggagc 1056

                            
Query: 390  gtcttgggaatccaca 405
            |||||||||| |||||
Sbjct: 1055 gtcttgggaacccaca 1040
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                           
Query: 330     atccccagggtggtccagatcgaactctttgcagcttcgtcggggtcatcaatccggagt 389
               ||||||||||||| |||||| || ||||| || || |||||||| || || || ||||| 
Sbjct: 8948760 atccccagggtggcccagatggagctcttcgccgcctcgtcgggatcgtcgatgcggagc 8948819

                               
Query: 390     gtcttgggaatccaca 405
               |||||||||| |||||
Sbjct: 8948820 gtcttgggaacccaca 8948835
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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 330   atccccagggtggtccagatcgaactctttgcagcttcgtcggggtcatcaatccggagt 389
             ||||||||||||| |||||| || ||||| || || |||||||| || || || ||||| 
Sbjct: 56515 atccccagggtggcccagatggagctcttcgccgcctcgtcgggatcgtcgatgcggagc 56574

                             
Query: 390   gtcttgggaatccaca 405
             |||||||||| |||||
Sbjct: 56575 gtcttgggaacccaca 56590
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>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence
          Length = 256751

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 437    atcagaatccctagggtgtttgccaagg 464
              ||||||||||| ||||||||||||||||
Sbjct: 130580 atcagaatcccaagggtgtttgccaagg 130607
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>gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome 1, complete sequence
          Length = 199753

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 437   atcagaatccctagggtgtttgccaagg 464
             ||||||||||| ||||||||||||||||
Sbjct: 32151 atcagaatcccaagggtgtttgccaagg 32178
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>gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC Library C) complete
              sequence
          Length = 198842

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 49     aaggatattacaggaaaagaaaaa 72
              ||||||||||||||||||||||||
Sbjct: 160599 aaggatattacaggaaaagaaaaa 160622
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>dbj|D10737.1|CHKRPL5G Chiken ribosomal protein L5 gene, complete cds
          Length = 8321

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 52   gatattacaggaaaagaaaaaca 74
            |||||||||||||||||||||||
Sbjct: 8140 gatattacaggaaaagaaaaaca 8162
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>ref|NM_125637.2| Arabidopsis thaliana CDF1 (CYCLING DOF FACTOR 1); DNA binding /
           transcription factor AT5G62430 (CDF1) mRNA, complete cds
          Length = 1083

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 342 gtccagatcgaactctttgcagcttc 367
           ||||| ||||||||||||||||||||
Sbjct: 726 gtccatatcgaactctttgcagcttc 701
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>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23,
              complete sequence
          Length = 156572

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 158    gaagggggaaaagaaacggcgg 179
              ||||||||||||||||||||||
Sbjct: 149121 gaagggggaaaagaaacggcgg 149100
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>gb|AY143830.1| Arabidopsis thaliana At5g62430/K19B1_4 mRNA, complete cds
          Length = 714

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 342 gtccagatcgaactctttgcagcttc 367
           ||||| ||||||||||||||||||||
Sbjct: 560 gtccatatcgaactctttgcagcttc 535
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>gb|AF446362.1|AF446362 Arabidopsis thaliana AT5g62430/K19B1_4 mRNA, complete cds
          Length = 1086

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 342 gtccagatcgaactctttgcagcttc 367
           ||||| ||||||||||||||||||||
Sbjct: 726 gtccatatcgaactctttgcagcttc 701
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 158      gaagggggaaaagaaacggcgg 179
                ||||||||||||||||||||||
Sbjct: 11423844 gaagggggaaaagaaacggcgg 11423823



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      gaagggggaaaagaaacggc 177
                ||||||||||||||||||||
Sbjct: 12014513 gaagggggaaaagaaacggc 12014532
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>dbj|AB231333.1| Arabidopsis thaliana CDF1 mRNA for cyclic dof factor 1, complete
           cds
          Length = 923

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 342 gtccagatcgaactctttgcagcttc 367
           ||||| ||||||||||||||||||||
Sbjct: 743 gtccatatcgaactctttgcagcttc 718
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>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1
          Length = 69927

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 342  gtccagatcgaactctttgcagcttc 367
            ||||| ||||||||||||||||||||
Sbjct: 9166 gtccatatcgaactctttgcagcttc 9191
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>gb|AC005355.1| Homo sapiens chromosome 5, P1 clone 1307e8 (LBNL H60), complete
             sequence
          Length = 78065

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    acaaggatattacaggaaaagaaaa 71
             |||||||||| ||||||||||||||
Sbjct: 15435 acaaggatatcacaggaaaagaaaa 15459
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>gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, complete sequence
          Length = 192758

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     acaaggatattacaggaaaagaaaa 71
              ||||||||| |||||||||||||||
Sbjct: 123627 acaaggatactacaggaaaagaaaa 123651
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>emb|AL672045.11| Human DNA sequence from clone RP11-577O19 on chromosome 1 ras-related
             C3 botulinum toxin substrate 1 (rho family, small GTP
             binding protein Rac1) (RAC1) pseudogene, complete sequence
          Length = 180303

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    acaaggatattacaggaaaagaaaa 71
             |||||||||||||| ||||||||||
Sbjct: 28874 acaaggatattacaagaaaagaaaa 28898
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>ref|XM_505415.1| Yarrowia lipolytica CLIB122, YALI0F14487g predicted mRNA
          Length = 2703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 373  ggtcatcaatccggagtgtct 393
            |||||||||||||||||||||
Sbjct: 1213 ggtcatcaatccggagtgtct 1233
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>gb|AC131953.1| Homo sapiens BAC clone RP11-632F7 from 4, complete sequence
          Length = 133973

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    acaaggatattacaggaaaagaaaa 71
             |||||||||||||| ||||||||||
Sbjct: 21769 acaaggatattacaagaaaagaaaa 21793
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>gb|AC092170.3| Homo sapiens BAC clone RP11-814G20 from 2, complete sequence
          Length = 25215

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 47   acaaggatattacaggaaaagaaaa 71
            |||||||||||||| ||||||||||
Sbjct: 2086 acaaggatattacaagaaaagaaaa 2062
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>dbj|AP001025.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-838N2, complete
              sequence
          Length = 218371

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     tattacaggaaaagaaaaaca 74
              |||||||||||||||||||||
Sbjct: 113156 tattacaggaaaagaaaaaca 113136
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>dbj|AP000793.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-812L3, complete
              sequences
          Length = 169152

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     acaaggatattacaggaaaagaaaa 71
              ||||||||||||||| |||||||||
Sbjct: 135925 acaaggatattacagaaaaagaaaa 135949
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 373     ggtcatcaatccggagtgtct 393
               |||||||||||||||||||||
Sbjct: 1932948 ggtcatcaatccggagtgtct 1932968
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>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence
          Length = 171792

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 437   atcagaatccctagggtgtttgccaagg 464
             ||||||||||| | ||||||||||||||
Sbjct: 90080 atcagaatcccaaaggtgtttgccaagg 90107
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>ref|XM_414523.1| PREDICTED: Gallus gallus similar to coagulation factor II
           (thrombin) receptor-like 2; protease-activated receptor
           3 (LOC416197), mRNA
          Length = 1299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 611 aggaatgggtgggccacaga 630
           ||||||||||||||||||||
Sbjct: 707 aggaatgggtgggccacaga 688
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>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06,
             complete sequence
          Length = 179695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gaagggggaaaagaaacggc 177
             ||||||||||||||||||||
Sbjct: 97327 gaagggggaaaagaaacggc 97346
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>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence
          Length = 195372

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 437  atcagaatccctagggtgtttgccaagg 464
            ||||||||||| | ||||||||||||||
Sbjct: 9722 atcagaatcccaaaggtgtttgccaagg 9695
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>gb|DQ138136.1| Muju virus isolate 97-32 nucleocapsid protein (N) mRNA, partial cds
          Length = 208

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 150 acatgcttgaagggggaaaagaaa 173
           ||||||||||| ||||||||||||
Sbjct: 174 acatgcttgaatggggaaaagaaa 197
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>emb|Z68287.1|HSN38E12 Human DNA sequence from clone LL22NC03-38E12 on chromosome 22, complete
             sequence
          Length = 38932

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tacaggaaaagaaaaacacc 76
             ||||||||||||||||||||
Sbjct: 35083 tacaggaaaagaaaaacacc 35102
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>emb|AL391538.11| Human DNA sequence from clone RP11-334H12 on chromosome 6, complete
             sequence
          Length = 131459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   caacatcgttttcttgatat 148
             ||||||||||||||||||||
Sbjct: 81241 caacatcgttttcttgatat 81222
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>emb|AL392103.6| Human DNA sequence from clone RP11-477L16 on chromosome 10 Contains a
             pseudogene similar to part of nuclease sensitive element
             binding protein 1 (NSEP1, part of the gene for SEC15 (S.
             cerevisiae)-like (SEC15L), and one CpG island, complete
             sequence
          Length = 125087

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    aaggatattacaggaaaagaaaaa 72
             |||||||||||||||||| |||||
Sbjct: 24799 aaggatattacaggaaaaaaaaaa 24776
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>emb|AL035423.4|HS20I3 Human DNA sequence from clone RP1-20I3 on chromosome Xq25-26 Contains a
             SNRPN upstream reading frame (SNURF) pseudogene, the
             SLC25A14 gene for solute carrier family 25 (mitochondrial
             carrier, brain),member 14 (UCP5, BMCP1), the gene for
             G-protein coupled receptor 2 (GPCR2), the gene for CGI-79
             protein and a CpG island, complete sequence
          Length = 140094

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 606   gggaaaggaatgggtgggccacag 629
             |||||||||||| |||||||||||
Sbjct: 91347 gggaaaggaatgagtgggccacag 91324
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>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12,
            complete sequence
          Length = 154111

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  tgcttgaagggggaaaagaa 172
            ||||||||||||||||||||
Sbjct: 5161 tgcttgaagggggaaaagaa 5180
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>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
              complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tgcttgaagggggaaaagaa 172
              ||||||||||||||||||||
Sbjct: 128032 tgcttgaagggggaaaagaa 128051
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>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete
             sequence
          Length = 176390

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    attacaggaaaagaaaaaca 74
             ||||||||||||||||||||
Sbjct: 29593 attacaggaaaagaaaaaca 29612
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     tgcttgaagggggaaaagaa 172
               ||||||||||||||||||||
Sbjct: 3661740 tgcttgaagggggaaaagaa 3661759
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>gb|AC015574.8|AC015574 Homo sapiens, clone RP11-44B21, complete sequence
          Length = 150288

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   aaggagaaaccaatggccaa 587
             ||||||||||||||||||||
Sbjct: 62949 aaggagaaaccaatggccaa 62968
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>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence
          Length = 171468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     ggatattacaggaaaagaaaaaca 74
              |||||||||||||||| |||||||
Sbjct: 143268 ggatattacaggaaaaaaaaaaca 143245
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>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence
          Length = 157285

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     gatattacaggaaaagaaaa 71
              ||||||||||||||||||||
Sbjct: 112939 gatattacaggaaaagaaaa 112920
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>emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, complete sequence
          Length = 157845

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atattacaggaaaagaaaaa 72
             ||||||||||||||||||||
Sbjct: 28905 atattacaggaaaagaaaaa 28924
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>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence
          Length = 201718

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     attacaggaaaagaaaaaca 74
              ||||||||||||||||||||
Sbjct: 182341 attacaggaaaagaaaaaca 182360
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>gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome 9, complete sequence
          Length = 188778

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    attacaggaaaagaaaaaca 74
             ||||||||||||||||||||
Sbjct: 90633 attacaggaaaagaaaaaca 90614


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,568,024
Number of Sequences: 3902068
Number of extensions: 5568024
Number of successful extensions: 108545
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108205
Number of HSP's gapped (non-prelim): 317
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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