>YCF2_SILLA (Q589A6) Protein ycf2|
          Length = 2223

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D   + F    ++++ V  + L      + +  +  +
Sbjct: 94  VERKNLYLIGLLPIPMNSIGPRNDTLEKPFWSSNINRLIVSLLYLPKGKNISASCFLDPK 153

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +  +   +PI     +PE      + W  W   +     + SNET+A IE    E+DIK 
Sbjct: 154 ESTSTWFLPITKKCIMPESNRGSQW-WRNWIGKKRDSSCKISNETVAGIEISFKEKDIKY 212

Query: 336 LRF-------------HGWEL 313
           L F             H WEL
Sbjct: 213 LEFLFVYYMDDPISKDHDWEL 233

>YCF2_NYMAL (Q6EVY7) Protein ycf2|
          Length = 2253

 Score = 33.1 bits (74), Expect = 0.88
 Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 22/220 (10%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D    +F    ++++ V  + L    + + +  +  +
Sbjct: 98  VERKNLYLMGLLPIPMNSIGPRNDTLEESFWSPNINRLIVSLLYLPKGKKISESCFMDPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +     ++PI     +PE      + W  W   +     + SNET+A IE    E+DIK 
Sbjct: 158 ESTW--VLPITQKCIMPESNWGSRW-WRNWIGKKRDSSCKISNETVAGIEISFKEKDIKY 214

Query: 336 LRF-------------HGWELSSSCA-----RVLRISTMLLKKGAARGLTPYDIGRILCR 211
           L F             HGWEL    +      ++ +++  L +  A+ L  Y +     +
Sbjct: 215 LEFLFVSYMDDPIRKDHGWELFDRVSPRKKRNIINLNSGQLFEILAKHLICYLMSAFREK 274

Query: 210 ETVNRDSVIEDIIQEAEDAVLPGTSENLFLETVSEIIDRH 91
             +  +  ++   Q+  +A +P       +E VS +  R+
Sbjct: 275 RPIEVEGFLK---QQGAEATIPSND----IEHVSHLFSRN 307

>YCF2_SPIOL (P08973) Protein ycf2|
          Length = 2131

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 17/150 (11%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G   + M + G   D   ++F    ++++ V  + L    + + +  +  +
Sbjct: 98  VERKNLYLIGLFPIPMNSIGPRNDTLEKSFGSSNINRLIVSLLYLPKGKKISESYFLDPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +      +PI     +PE      + W  W   R     + SNET+A IE    E+DI+ 
Sbjct: 158 ESTW--FLPITKKCIMPESNRGSRW-WRNWIGKRRDSSCKISNETVAGIEISFKEKDIQY 214

Query: 336 LRF-------------HGWELSSSCARVLR 286
           L F             H WEL    +  LR
Sbjct: 215 LEFPFVYYMDDPIRKDHDWELFDCLSLFLR 244

>YCF2_LOTJA (Q9B1K6) Protein ycf2|
          Length = 2298

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
 Frame = -3

Query: 690 RSLHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVS 511
           + + R   +  G L + M + G   D    +F    ++++ V  + L    + + +  + 
Sbjct: 96  KMVERKNLYLTGLLPIPMNSIGPRNDTLEESFESSNINRLIVPLLYLPKEKKISESSFLD 155

Query: 510 KEDGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDI 343
            ++    +++PI     +PE      + W  W + +     + SNET+A IE    E+DI
Sbjct: 156 PKEST--QVLPITKKCIMPESNWGSRW-WRDWIRKKRDSSCKISNETVAGIEISFKEKDI 212

Query: 342 KLLRF-------------HGWEL 313
           K L F             H WEL
Sbjct: 213 KYLEFPFVYYMDDPIRKDHDWEL 235

>AGUA_VIBPA (Q87NU5) Putative agmatine deiminase (EC 3.5.3.12) (Agmatine|
           iminohydrolase)
          Length = 360

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = -3

Query: 480 PIDHGYCLPEKFEDCTFEWLYWPQARERF------SNETIAYIESLDAE 352
           P   G+  P +F+  +  WL WP+ ++ +      + ET A I +L AE
Sbjct: 7   PAQDGFYFPAEFQPVSEVWLAWPERKDNWRDDALPAQETFARIANLIAE 55

>LSB6_YEAST (P42951) Phosphatidylinositol 4-kinase LSB6 (EC 2.7.1.67)|
           (PI4-kinase) (PtdIns-4-kinase)
          Length = 607

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
 Frame = -3

Query: 585 EVHKIAVLDIRLANADRHAGNILVS----KEDGATCKLIPIDHGYCLPEKFED----CTF 430
           E+ K+ +LD  + N DR   N +V       +    KL  ID+G   P K  D      +
Sbjct: 372 ELEKLIILDYIMRNTDRGLDNWMVKLIKLSNNKWRLKLAAIDNGLSFPWKHPDEWRLYPY 431

Query: 429 EWLYWP 412
            WLY P
Sbjct: 432 GWLYLP 437

>YCF2_OENHO (Q9MEF2) Protein ycf2|
          Length = 2280

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 17/56 (30%)
 Frame = -3

Query: 429 EWLYWPQARE----RFSNETIAYIESLDAEEDIKLLRF-------------HGWEL 313
           +W  W   R     + SNET+A IE L  E+D+K L F             H WEL
Sbjct: 156 KWRNWIGKRRDSSCKISNETVAGIEILFKEKDLKYLEFLFVYYMDDPIRKDHDWEL 211

>AGUA_ARATH (Q8GWW7) Agmatine deiminase (EC 3.5.3.12) (Agmatine iminohydrolase)|
          Length = 383

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -3

Query: 480 PIDHGYCLPEKFEDCTFEWLYWPQARERFSNETI 379
           P +HGY +P +++     W+ WP+ ++ + +  +
Sbjct: 8   PAEHGYYMPAEWDSHAQTWIGWPERQDNWRHNAL 41

>CYSP1_MAIZE (Q10716) Cysteine proteinase 1 precursor (EC 3.4.22.-)|
          Length = 371

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 103 DLRHGLQEQVLTRPRENGVLRFLDDVLDHRVSIHSFPAQYTSYVIGCETSRSALLQEHGA 282
           +LR   + Q+L    E+GV +F D            PA++    +G   SR ALL+E G 
Sbjct: 75  NLRRARRHQLLDPSAEHGVTKFSDLT----------PAEFRRTYLGLRKSRRALLRELGE 124

Query: 283 DAQD 294
            A +
Sbjct: 125 SAHE 128

>YCF2_LYCES (P61242) Protein ycf2|
          Length = 2278

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D    +     ++++ V  + L    + + +  ++ +
Sbjct: 98  VERKNLYLIGLLPIPMNSIGPRNDTLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +     ++PI     +PE      + W  W   +     + SNET+A IE L  E+D+K 
Sbjct: 158 ESTW--VLPITKKCSMPESNWGSRW-WRNWIGKKRDSSCKISNETVAGIEILFKEKDLKY 214

Query: 336 LRF-------------HGWEL 313
           L F             H WEL
Sbjct: 215 LEFLFVYYMDDPIRKDHDWEL 235

>YCF2_TOBAC (P09976) Protein ycf2|
          Length = 2280

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D    +     ++++ V  + L    + + +  ++ +
Sbjct: 98  VERKNLYLIGLLPIPMNSIGPRNDTLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +     ++PI     +PE      + W  W   +     + SNET+A IE L  E+D+K 
Sbjct: 158 ESTW--VLPITKKCSMPESNWGSRW-WRNWIGKKRDSSCKISNETVAGIEILFKEKDLKY 214

Query: 336 LRF-------------HGWEL 313
           L F             H WEL
Sbjct: 215 LEFLFVYYMDDPIRKDHDWEL 235

>YCF2B_ATRBE (Q8S8U1) Protein ycf2|
          Length = 2291

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D    +     ++++ V  + L    + + +  ++ +
Sbjct: 98  VERKNLYLIGLLPIPMNSIGPRNDTLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +     ++PI     +PE      + W  W   +     + SNET+A IE L  E+D+K 
Sbjct: 158 ESTW--VLPITKKCSMPESNWGSRW-WRNWIGKKRDSSCKISNETVAGIEILFKEKDLKY 214

Query: 336 LRF-------------HGWEL 313
           L F             H WEL
Sbjct: 215 LEFLFVYYMDDPIRKDHDWEL 235

>YCF2A_ATRBE (Q8S8V2) Protein ycf2|
          Length = 2291

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
 Frame = -3

Query: 684 LHRGKSFKFGSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKE 505
           + R   +  G L + M + G   D    +     ++++ V  + L    + + +  ++ +
Sbjct: 98  VERKNLYLIGLLPIPMNSIGPRNDTLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPK 157

Query: 504 DGATCKLIPIDHGYCLPEKFEDCTFEWLYWPQARE----RFSNETIAYIESLDAEEDIKL 337
           +     ++PI     +PE      + W  W   +     + SNET+A IE L  E+D+K 
Sbjct: 158 ESTW--VLPITKKCSMPESNWGSRW-WRNWIGKKRDSSCKISNETVAGIEILFKEKDLKY 214

Query: 336 LRF-------------HGWEL 313
           L F             H WEL
Sbjct: 215 LEFLFVYYMDDPIRKDHDWEL 235

>RS18_MYCMO (Q6KI65) 30S ribosomal protein S18|
          Length = 84

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -3

Query: 396 FSNETIAYIESLDAEEDIKLLRFHGWELSS----SCARVLRISTMLLKKGAARGLTPYDI 229
           F  E I YI+  D E   K +  HG  LSS    +CA+  R+ + ++K+     L P+  
Sbjct: 20  FHVEKIKYIDYKDVELVSKYINNHGKILSSKITGNCAKHQRLISNVIKRARIMALIPFIS 79

Query: 228 GRI 220
            RI
Sbjct: 80  ERI 82

>MUKB_ECOLI (P22523) Chromosome partition protein mukB (Structural maintenance|
           of chromosome related protein)
          Length = 1486

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 24/95 (25%), Positives = 43/95 (45%)
 Frame = -3

Query: 459 LPEKFEDCTFEWLYWPQARERFSNETIAYIESLDAEEDIKLLRFHGWELSSSCARVLRIS 280
           LP+   DC  EWL   QA+E  + E     + L  E+ + + +    +   +   V+ I+
Sbjct: 432 LPDLTADCAAEWLETFQAKELEATE-----KMLSLEQKMSMAQTAHSQFEQAYQLVVAIN 486

Query: 279 TMLLKKGAARGLTPYDIGRILCRETVNRDSVIEDI 175
             L +  A      +D+ R L RE V++  + E +
Sbjct: 487 GPLARNEA------WDVARELLREGVDQRHLAEQV 515

>YCF2_ARATH (P56786) Protein ycf2|
          Length = 2294

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 17/150 (11%)
 Frame = -3

Query: 657 GSLQMFMENDGSCEDMGPRAFPVKEVHKIAVLDIRLANADRHAGNILVSKEDGATCKLIP 478
           G L + M + G   D    +F    ++++ V  + L    + + +     ++     ++P
Sbjct: 107 GLLPIPMNSIGPRNDTSEESFGSCNINRLIVSLLYLTKGKKISESCFRDPKESTW--VLP 164

Query: 477 IDHGYCLPEKFEDCTFEWLYWPQARERF----SNETIAYIESLDAEEDIKLLRF------ 328
           I     +PE      + W  W   +  F    SNET+A I+    E+DIK L F      
Sbjct: 165 ITQKCIMPESNWSSRW-WRNWIGKKRGFCCKISNETVAGIDISFKEKDIKYLEFLFVYYM 223

Query: 327 -------HGWELSSSCARVLRISTMLLKKG 259
                  H WEL    +   R + + L  G
Sbjct: 224 DDPIRKGHDWELFDRLSPSKRRNIINLNSG 253

>COMM_DROME (Q24139) Protein commissureless|
          Length = 370

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 184 DHRVSIHSFPAQYTSYVIGCETSRSALLQE 273
           D R  IH+    Y+S+++GC+ SR  L Q+
Sbjct: 172 DIRAQIHAASDSYSSHLVGCDASRLLLHQQ 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,313,344
Number of Sequences: 219361
Number of extensions: 2107752
Number of successful extensions: 6408
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6408
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)