ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasde22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repea... 200 2e-51
2ADO1_ARATH (Q94BT6) Adagio protein 1 (Protein ZEITLUPE) (LOV kel... 166 2e-41
3ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flav... 158 8e-39
4BSL2_ARATH (Q9SJF0) Serine/threonine-protein phosphatase BSL2 (E... 38 0.016
5BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (E... 37 0.021
6DYHA_CHLRE (Q39610) Dynein alpha chain, flagellar outer arm (DHC... 36 0.047
7RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB) 33 0.30
8FBX42_MOUSE (Q6PDJ6) F-box only protein 42 30 2.6
9GFA1_CANAL (P53704) Glucosamine--fructose-6-phosphate aminotrans... 30 4.4
10FBX42_PONPY (Q5RDA9) F-box only protein 42 30 4.4
11FBX42_HUMAN (Q6P3S6) F-box only protein 42 30 4.4
12ZN235_MOUSE (Q61116) Zinc finger protein 235 (Zinc finger protei... 29 5.7
13KLDC4_MOUSE (Q921I2) Kelch domain-containing protein 4 29 7.5
14ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.... 29 7.5
15SYS_HAEDU (Q7VM65) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 28 9.7

>ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repeat F-box|
           protein 1) (F-box only protein 2a) (FBX2a)
          Length = 619

 Score =  200 bits (508), Expect = 2e-51
 Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
 Frame = -2

Query: 481 SGSLRLRSSDAYIMDVGEENPQWRQLATTVFPSGC-PPPRLDHVTVSLPCGRIIIFGGSI 305
           SG L+LRS +AY +D+ +E P+WR+L  + FP    PPPRLDHV VS+PCGR+IIFGGSI
Sbjct: 484 SGHLKLRSGEAYTIDLEDEEPRWRELECSAFPGVVVPPPRLDHVAVSMPCGRVIIFGGSI 543

Query: 304 AGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCXXXXXXXXXXXGHSGEEWIL 125
           AGLHSP +LFL+DPAEEKP+WRILNVPG+PPK AWGHSTC           GH+GEEWIL
Sbjct: 544 AGLHSPSQLFLIDPAEEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLVLGGHTGEEWIL 603

Query: 124 NELHELCLASRPDED 80
           NELHELCLASR D D
Sbjct: 604 NELHELCLASRQDSD 618



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPP-PRLDHVTVSLPCGRIIIFGGSIAGLHSPXE 281
           +D +++D+  ++P W+++A      G PP PR  H + ++   ++++ GG         +
Sbjct: 383 NDVFVLDLDAKHPTWKEVA-----GGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSD 437

Query: 280 LFLLDPAEEKPTWRILNVPGQPPKFAWGHS 191
            FLLD   +KPTW+ +     PP    GHS
Sbjct: 438 TFLLDLTTDKPTWKEIPTSWAPPS-RLGHS 466



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLH---SP 287
           SD +++D+  + P W+++ T    S  PP RL H        +I++FGG     H     
Sbjct: 436 SDTFLLDLTTDKPTWKEIPT----SWAPPSRLGHSLSVFGRTKILMFGGLANSGHLKLRS 491

Query: 286 XELFLLDPAEEKPTWRILNVPGQP 215
            E + +D  +E+P WR L     P
Sbjct: 492 GEAYTIDLEDEEPRWRELECSAFP 515



 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -2

Query: 454 DAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGG-SIAGLHSPXEL 278
           D +++++  E P+W+++  T      PP R  H    L    +++FGG    GL +  ++
Sbjct: 332 DTFVLNLDAECPEWQRVRVT----SSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DV 385

Query: 277 FLLDPAEEKPTWRILNVPGQPPKFAWGHSTC 185
           F+LD   + PTW+ +   G PP     HS+C
Sbjct: 386 FVLDLDAKHPTWKEV-AGGTPPLPRSWHSSC 415



 Score = 33.9 bits (76), Expect = 0.23
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 331 RIIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWGHS 191
           R+++FGG    +    + F+L+   E P W+ + V   PP   WGH+
Sbjct: 316 RLVLFGGEGVNMQPLDDTFVLNLDAECPEWQRVRVTSSPPG-RWGHT 361



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>ADO1_ARATH (Q94BT6) Adagio protein 1 (Protein ZEITLUPE) (LOV kelch protein 1)|
           (Flavin-binding kelch repeat F-box protein 1-like
           protein 2) (FKF1-like protein 2) (F-box only protein 2b)
           (FBX2b) (Clock-associated PAS protein ZTL)
          Length = 609

 Score =  166 bits (421), Expect = 2e-41
 Identities = 78/135 (57%), Positives = 95/135 (70%), Gaps = 6/135 (4%)
 Frame = -2

Query: 481 SGSLRLRSSDAYIMDVGEENPQWRQLATTVFPSG------CPPPRLDHVTVSLPCGRIII 320
           SG L+ RSSD + MD+ EE P WR +  +  P         PPPRLDHV V+LP GRI+I
Sbjct: 472 SGPLKFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILI 531

Query: 319 FGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCXXXXXXXXXXXGHSG 140
           FGGS+AGLHS  +L+LLDP E+KPTWRILN+PG+PP+FAWGH TC           G +G
Sbjct: 532 FGGSVAGLHSASQLYLLDPTEDKPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTG 591

Query: 139 EEWILNELHELCLAS 95
           EEW+L+ELHEL LAS
Sbjct: 592 EEWMLSELHELSLAS 606



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAG----LHS 290
           SD +++D+  E P WR++      +  PP RL H T+S+  GR I+  G +A        
Sbjct: 424 SDTFLLDLSIEKPVWREIPA----AWTPPSRLGH-TLSVYGGRKILMFGGLAKSGPLKFR 478

Query: 289 PXELFLLDPAEEKPTWRILNVPGQP 215
             ++F +D +EE+P WR +   G P
Sbjct: 479 SSDVFTMDLSEEEPCWRCVTGSGMP 503



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGG-SIAGLHSPXE 281
           +D +++D+  + P+W+ +      S  PP R  H    +    +++FGG    GL +  +
Sbjct: 319 NDTFVLDLNSDYPEWQHVKV----SSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLN--D 372

Query: 280 LFLLDPAEEKPTWRILNVPGQPPKFAWGHSTC 185
           +F+L+   + PTWR ++    P   +W HS+C
Sbjct: 373 VFVLNLDAKPPTWREISGLAPPLPRSW-HSSC 403



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = -2

Query: 427 ENPQWRQLAT--TVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEE 254
           E   WR+L+   +V PS C      + +      R+++FGG    +    + F+LD   +
Sbjct: 276 EAAAWRKLSVGGSVEPSRC------NFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSD 329

Query: 253 KPTWRILNVPGQPPKFAWGHS-TCXXXXXXXXXXXGHSGEEWILNELHELCLASRP 89
            P W+ + V   PP   WGH+ TC              G++ +LN++  L L ++P
Sbjct: 330 YPEWQHVKV-SSPPPGRWGHTLTCVNGSNLVVFGG--CGQQGLLNDVFVLNLDAKP 382



 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPP--RLDHVTVSLPCGRIIIFGGSIAGLHSPX 284
           +D +++++  + P WR++      SG  PP  R  H + +L   ++I+ GG         
Sbjct: 371 NDVFVLNLDAKPPTWREI------SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLS 424

Query: 283 ELFLLDPAEEKPTWRILNVPGQPP 212
           + FLLD + EKP WR +     PP
Sbjct: 425 DTFLLDLSIEKPVWREIPAAWTPP 448



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>ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flavin-binding|
           kelch repeat F-box protein 1-like protein 1) (FKF1-like
           protein 1) (F-box only protein 2c) (FBX2c)
          Length = 611

 Score =  158 bits (399), Expect = 8e-39
 Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
 Frame = -2

Query: 481 SGSLRLRSSDAYIMDVGEENPQWRQLAT--TVFPSG--CPPPRLDHVTVSLPCGRIIIFG 314
           +G+LR RS+D Y MD+ E+ P WR +    +  P G   PPPRLDHV +SLP GRI+IFG
Sbjct: 473 NGTLRFRSNDVYTMDLSEDEPSWRPVIGYGSSLPGGMAAPPPRLDHVAISLPGGRILIFG 532

Query: 313 GSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCXXXXXXXXXXXGHSGEE 134
           GS+AGL S  +L+LLDP EEKP WRILNV G PP+FAWGH+TC           G +GEE
Sbjct: 533 GSVAGLDSASQLYLLDPNEEKPAWRILNVQGGPPRFAWGHTTCVVGGTRLVVLGGQTGEE 592

Query: 133 WILNELHELCLAS 95
           W+LNE HEL LA+
Sbjct: 593 WMLNEAHELLLAT 605



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLHS-PXE 281
           +D +++D+G  +P+W+    +V  S  PP R  H    +   R+++FGG   G H    +
Sbjct: 320 NDTFVLDLGSSSPEWK----SVLVSSPPPGRWGHTLSCVNGSRLVVFGG--YGSHGLLND 373

Query: 280 LFLLDPAEEKPTWRILNVPGQPPKFAWGHSTC 185
           +FLLD   + P+WR ++    P   +W HS+C
Sbjct: 374 VFLLDLDADPPSWREVSGLAPPIPRSW-HSSC 404



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = -2

Query: 457 SDAYIMDVGEENPQWRQLATTVFPSGCPPP--RLDHVTVSLPCGRIIIFGGSIAGLHSPX 284
           +D +++D+  + P WR++      SG  PP  R  H + +L   ++I+ GG         
Sbjct: 372 NDVFLLDLDADPPSWREV------SGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLS 425

Query: 283 ELFLLDPAEEKPTWRILNVPGQPP 212
           + FLLD + + P WR + VP  PP
Sbjct: 426 DTFLLDLSMDIPAWREIPVPWTPP 449



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = -2

Query: 427 ENPQWRQLAT--TVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEE 254
           E   WR+ +   TV PS C      + +      RI+IFGG    +    + F+LD    
Sbjct: 277 EATAWRKFSVGGTVEPSRC------NFSACAVGNRIVIFGGEGVNMQPMNDTFVLDLGSS 330

Query: 253 KPTWRILNVPGQPPKFAWGHS 191
            P W+ + V   PP   WGH+
Sbjct: 331 SPEWKSVLV-SSPPPGRWGHT 350



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>BSL2_ARATH (Q9SJF0) Serine/threonine-protein phosphatase BSL2 (EC 3.1.3.16)|
           (BSU1-like protein 2)
          Length = 1088

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -2

Query: 400 TTVFPSGCPP-PRLDHVTVSLPCGRIIIFGGSI--AGLHSPXELFLLDPAEEKPTWRILN 230
           T + P G PP PR  HV  ++  G +++  G I  AGL S  +L +LD  +++P W  + 
Sbjct: 193 TRLTPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGL-SAEDLHVLDLTQQRPRWHRVV 249

Query: 229 VPGQPPKFAWGH 194
           V G  P   +GH
Sbjct: 250 VQGPGPGPRYGH 261



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>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)|
           (BSU1-like protein 3)
          Length = 715

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = -2

Query: 460 SSDAYIMDVGEENPQWRQLATTVFPSGCPP-PRLDHVTVSLPCGRIIIFGGSI--AGLHS 290
           ++D +  DV     +W +L     P G PP PR  HV  ++  G +++  G I  AGL S
Sbjct: 127 TADVHCYDVLSN--KWSRLT----PYGEPPSPRAAHVATAV--GTMVVIQGGIGPAGL-S 177

Query: 289 PXELFLLDPAEEKPTWRILNVPGQPPKFAWGH 194
             +L +LD  +++P W  + V G  P   +GH
Sbjct: 178 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 209



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>DYHA_CHLRE (Q39610) Dynein alpha chain, flagellar outer arm (DHC alpha)|
          Length = 4499

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
 Frame = -2

Query: 457 SDAYIMDVGEENP-QWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGL-HSPX 284
           +D Y +D  + +  +W++L      +  PPPR  H  ++L   R+++FGG    + ++  
Sbjct: 47  NDLYELDTSDPDEYKWKELVV----ANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDV 102

Query: 283 ELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCXXXXXXXXXXXGHSGEEWILNEL 116
            LF  D      +W  + V G  P+    H T            G+ G   + NE+
Sbjct: 103 WLFNYD----DKSWTCMEVEGAAPE-PRAHFTATRFGSRVFIFGGYGGSGQVYNEM 153



 Score = 33.9 bits (76), Expect = 0.23
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -2

Query: 427 ENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGG-SIAGLHSPXELFLLDPAEEK 251
           E  +WR    TV  S  PP R  H TV L  G +++FGG ++A  +   +++ L    E 
Sbjct: 579 EGAEWRWSPATVSGS-TPPDRTAHSTVVLSDGELVVFGGINLADQNDLNDIYYLRKQGEG 637

Query: 250 PTW 242
             W
Sbjct: 638 WVW 640



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>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)|
          Length = 943

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 30/107 (28%), Positives = 42/107 (39%)
 Frame = -2

Query: 427 ENPQWRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEEKP 248
           E+ +WRQ    V     P  R  H T  +   ++ IFGG   G     +++ LD   E  
Sbjct: 163 ESNEWRQ---QVCGGVIPSARATHSTFQVNNNKMFIFGG-YDGKKYYNDIYYLDL--ETW 216

Query: 247 TWRILNVPGQPPKFAWGHSTCXXXXXXXXXXXGHSGEEWILNELHEL 107
            W+ +   G PPK   GHS             G       LN++H L
Sbjct: 217 IWKKVEAKGTPPKPRSGHSATMIQNNKLMIFGGCGSSSNFLNDIHIL 263



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 382 GCPPPRLDHVTVSLPCGR-IIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKF 206
           G P PR  H   +LP G   I+FGG+     +  + + +       +W  +   G  P  
Sbjct: 12  GSPEPRWGHTGTTLPNGSGFIVFGGNSNRAFNDIQYYNI----FNNSWSKIEAVGNAPSE 67

Query: 205 AWGHS 191
            +GHS
Sbjct: 68  RYGHS 72



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>FBX42_MOUSE (Q6PDJ6) F-box only protein 42|
          Length = 717

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -2

Query: 376 PPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWG 197
           PPP   H +  +   ++I+FGGS+       E+++LD   E+  W   N+ G  P    G
Sbjct: 229 PPPMAGHSSCVIG-DKMIVFGGSLGSRQMSNEVWVLD--LEQWAWSKPNISGPSPHPRGG 285

Query: 196 HS 191
            S
Sbjct: 286 QS 287



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>GFA1_CANAL (P53704) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
          Length = 712

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +2

Query: 59  GTST*SSIFVGPACEAELVELIQDPLLSAVSTKNQDPSATNHAGAVSPSELGWLP----- 223
           GT   S + VG   + +L     D    A           NH GA S +ELG++P     
Sbjct: 203 GTRKGSPLLVGVKTDKKLKVDFVDVEFEAQQQHRPQQPQINHNGATSAAELGFIPVAPGE 262

Query: 224 RDVQDSPCRFFLS 262
           ++++ S  R FLS
Sbjct: 263 QNLRTSQSRAFLS 275



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>FBX42_PONPY (Q5RDA9) F-box only protein 42|
          Length = 717

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 376 PPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWG 197
           PPP   H +  +   ++I+FGGS+       ++++LD   E+  W   N+ G  P    G
Sbjct: 229 PPPMAGHSSCVID-DKMIVFGGSLGSRQMSNDVWVLD--LEQWAWSKPNISGPSPHPRGG 285

Query: 196 HS 191
            S
Sbjct: 286 QS 287



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>FBX42_HUMAN (Q6P3S6) F-box only protein 42|
          Length = 717

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 376 PPPRLDHVTVSLPCGRIIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVPGQPPKFAWG 197
           PPP   H +  +   ++I+FGGS+       ++++LD   E+  W   N+ G  P    G
Sbjct: 229 PPPMAGHSSCVID-DKMIVFGGSLGSRQMSNDVWVLD--LEQWAWSKPNISGPSPHPRGG 285

Query: 196 HS 191
            S
Sbjct: 286 QS 287



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>ZN235_MOUSE (Q61116) Zinc finger protein 235 (Zinc finger protein 93) (Zfp-93)|
          Length = 645

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
 Frame = +3

Query: 72  NHPSSSG----LLAR-QSSWS----SFRIHSSPLCPPRTKTLVPPTTQVLCPQANLGGC 221
           NH SSS     L  R QSSWS    S R +    CP   +TLV   +Q+L P  N+ GC
Sbjct: 132 NHSSSSDNQEFLSGRAQSSWSKAHFSERWNHEKHCP---QTLVKTKSQLLAPGVNILGC 187



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>KLDC4_MOUSE (Q921I2) Kelch domain-containing protein 4|
          Length = 584

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = -2

Query: 400 TTVFPSGCPPP--RLDHVTVSLP-CGRIIIFGGSIAGLHSPX---ELFLLDPAEEKPTWR 239
           T V  + CPPP  RL+    + P    +I+FGG            EL++   +  K TW 
Sbjct: 51  TQVTETPCPPPSPRLNASLSAHPEKDELILFGGEYFNGQKTFMYNELYIY--SIRKDTWT 108

Query: 238 ILNVPGQPPK 209
            +++PG PP+
Sbjct: 109 KVDIPGPPPR 118



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>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)|
           (Anaplastic lymphoma kinase) (CD246 antigen)
          Length = 1621

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = -2

Query: 415 WRQLATTVFPSGCPPPRLDHVTVSLPCGRIIIFGGSIAGLHS---PXELFLLDPAEEKPT 245
           W Q+ T   P        D++++SL C  + I G     L+S      LF  +P +E  +
Sbjct: 612 WLQIVTWWGPGSRATVGFDNISISLDC-YLTISGEEKMSLNSVPKSRNLFEKNPNKESKS 670

Query: 244 WRILNVPGQPPKF----AWGHSTC 185
           W   N+ G  P F     W  +TC
Sbjct: 671 W--ANISGPTPIFDPTVHWLFTTC 692



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>SYS_HAEDU (Q7VM65) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 435

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
 Frame = -2

Query: 349 VSLPCGRIIIFGGSIAGLHSPXELFLLDPAEEKPTWRILNVP-----------GQPPKF 206
           V L   R ++    IA LH     F+LD   E+  +  +NVP           GQ PKF
Sbjct: 156 VKLTASRFVVMKDKIARLHRALAQFMLDLHSEQHGYMEVNVPLLVNHDTLYGTGQLPKF 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,348,772
Number of Sequences: 219361
Number of extensions: 1579271
Number of successful extensions: 4547
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4533
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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