| Clone Name | rbasdc14 |
|---|---|
| Clone Library Name | barley_pub |
>Y2162_ARATH (O22224) Protein At2g41620| Length = 861 Score = 216 bits (549), Expect = 8e-56 Identities = 100/165 (60%), Positives = 133/165 (80%) Frame = -3 Query: 732 TVNKCLSDAVCALAHNMLDGESRAVGLIQSGNEILETARYSSEASVQDKDLISEQQIVLR 553 T+NKCLS+A+C+LA LDGESR GLI +GN+ILET +Y E S+Q+++ + EQ+ +LR Sbjct: 695 TINKCLSEAICSLARGRLDGESRTSGLILAGNDILETYKYYPEVSLQERERVMEQETILR 754 Query: 552 QLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHVQACVPDLLK 373 +LEAIL I++L R G +DALRE KLPFLHLDP+ P+ + DVF++ SP+ Q CVPDLLK Sbjct: 755 ELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYFQTCVPDLLK 814 Query: 372 VALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQ 238 VAL C+DNV DTDG++RA++SKIA +ASN RNWP+DLY+KVA+ Sbjct: 815 VALTCLDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYEKVAR 859
>TLN1_CHICK (P54939) Talin-1| Length = 2541 Score = 33.1 bits (74), Expect = 0.91 Identities = 32/147 (21%), Positives = 58/147 (39%) Frame = -3 Query: 723 KCLSDAVCALAHNMLDGESRAVGLIQSGNEILETARYSSEASVQDKDLISEQQIVLRQLE 544 K ++ A+ L + G G+ + E+ + R S+A+ S+ Q LE Sbjct: 1095 KAVTSAIAHLLGEVAQGNENYTGI--AAREVAQALRSLSQAARGVAANSSDPQAQNAMLE 1152 Query: 543 AILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHVQACVPDLLKVAL 364 + + +A ++ R+ + P DP S V V + +S + CV Sbjct: 1153 CASDV--MDKANNLIEEARKAVAKPG---DPDSQQRLVQVAKAVSQALNRCV-------- 1199 Query: 363 NCMDNVRDTDGTLRAVKSKIANLVASN 283 NC+ RD D +R V L++ + Sbjct: 1200 NCLPGQRDVDAAIRMVGEASKRLLSDS 1226
>HUTU_RALSO (Q8XW28) Urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 601 Score = 32.0 bits (71), Expect = 2.0 Identities = 27/108 (25%), Positives = 49/108 (45%) Frame = -3 Query: 717 LSDAVCALAHNMLDGESRAVGLIQSGNEILETARYSSEASVQDKDLISEQQIVLRQLEAI 538 + DA+ + H+ GE+ ++GL+ + E+L + A DL+++Q + Sbjct: 258 IDDALNLIRHHCERGEAVSIGLLGNAAELLPELVRRARAGGLKPDLVTDQTSAHDLVNGY 317 Query: 537 LHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHVQA 394 L AG TV+ R + P H ++S + R+ + HVQA Sbjct: 318 L------PAGWTVEQWRAAQRDPAQH-----AHLSAEAARSCAVHVQA 354
>LCMT2_CANGA (Q6FXA5) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| Length = 674 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/78 (26%), Positives = 32/78 (41%) Frame = -3 Query: 474 LPFLHLDPQSPNVSVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANL 295 LPF LDPQ+P S + N + PDLL + + + + + N+ Sbjct: 115 LPFEMLDPQNPQYS--RYSNRLNFIDIDYPDLLNIKSGVIKETPELLSIIGGIDPTETNM 172 Query: 294 VASNMSRNWPQDLYQKVA 241 + S + P DLY A Sbjct: 173 IISERYKTIPCDLYDMPA 190
>CD014_MOUSE (Q9JJG9) Protein C4orf14 homolog| Length = 693 Score = 31.2 bits (69), Expect = 3.5 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = -3 Query: 618 RYSSEASVQDKDLISEQQIVLRQLEAILHIYRLARAGQTVDALRETIKLPF 466 R +A+ ++DL E+Q L QL+ H Y + R G+T RE ++PF Sbjct: 408 RLQEDATKAEEDLSEEEQSQLNQLKK--HGYIVGRVGRTFSYSREQDEVPF 456
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 30.8 bits (68), Expect = 4.5 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -2 Query: 445 SECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 293 S C S C Q + C C+ S G S C + P CCQ C+PC Sbjct: 209 SGCGSSCCQS--SCCKPCCSSSGCGSSCCQSSCCK----PYCCQSSCCKPC 253
>CHS2_NEUCR (P30589) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) Length = 944 Score = 30.8 bits (68), Expect = 4.5 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 Query: 330 TLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI 232 T+ AV I++ + N SR W D +QK+ C+ Sbjct: 256 TMHAVMKNISHFCSRNKSRTWGADGWQKIVVCV 288
>NIC96_YEAST (P34077) Nucleoporin NIC96 (Nuclear pore protein NIC96) (96 kDa| nucleoporin-interacting component) Length = 839 Score = 30.8 bits (68), Expect = 4.5 Identities = 22/94 (23%), Positives = 45/94 (47%) Frame = -3 Query: 627 ETARYSSEASVQDKDLISEQQIVLRQLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQ 448 + A S + V++K++ ++L + +I +Y + +T+ + LPF D Sbjct: 698 DNAGISRQIHVKNKEIC----MLLLNISSIRELYFNKQWQETLSQMELLDLLPFS--DEL 751 Query: 447 SPNVSVDVFRNLSPHVQACVPDLLKVALNCMDNV 346 S F NL ++ +P+LL + L+C+ N+ Sbjct: 752 SARKKAQDFSNLDDNIVKNIPNLLIITLSCISNM 785
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 30.8 bits (68), Expect = 4.5 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Frame = -2 Query: 514 CWTNC*RSEGNHQTSISSFGSTVSECISRCIQEFITPCSSLCAR-----------SPEGC 368 C C +++ + S F +C ++FI C+ + PEGC Sbjct: 1569 CACQCLKTKVCTDSDFSFFSHDTCDCECSNAKDFILNCNQKLNKVSCQPQCIQRPPPEGC 1628 Query: 367 SKLHGQC*RYRWDPACCQVKDCE 299 ++ G+ + WDP C+ K E Sbjct: 1629 AEKFGEF--FSWDPKACECKCIE 1649
>KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A| Length = 130 Score = 30.4 bits (67), Expect = 5.9 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -2 Query: 436 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 293 +SRC + PC P CS G C P CQ C PC Sbjct: 46 VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91
>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)| Length = 132 Score = 30.4 bits (67), Expect = 5.9 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -2 Query: 436 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 293 +SRC + PC P CS G C P CQ C PC Sbjct: 46 VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91
>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein| 2.4) (High sulfur keratin-associated protein 2.4) Length = 128 Score = 30.0 bits (66), Expect = 7.7 Identities = 15/49 (30%), Positives = 18/49 (36%) Frame = -2 Query: 439 CISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 293 C+ RC + PC P CS G C P+ C C PC Sbjct: 46 CVPRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPSSCTAVVCRPC 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,916,624 Number of Sequences: 219361 Number of extensions: 2597768 Number of successful extensions: 6787 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 6455 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6757 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)