| Clone Name | rbasdc14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full insert sequence Length = 3073 Score = 515 bits (260), Expect = e-143 Identities = 430/486 (88%), Gaps = 3/486 (0%) Strand = Plus / Minus Query: 229 tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 288 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 2691 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 2632 Query: 289 tgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaac 348 |||||| ||||| || |||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 2631 tgccacgaggtttgcgatctttgacttgactgcacgcaaggtcccatcagtatctctaac 2572 Query: 349 attgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatgggg 408 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 2571 attgtccatacaatttagagcaaccttcaagagatctggcacacaagcttgaacatgcgg 2512 Query: 409 tgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaaa 468 ||| || || ||||| ||||| |||| ||||| |||| ||| ||||||||||||||||| Sbjct: 2511 tgacaagtttctgaacacatcaactgtcacatttggagcctgaggatccaaatgaagaaa 2452 Query: 469 tggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctata 528 ||| ||||||||||||||||||| ||| || | ||| |||||||| ||||| |||||||| Sbjct: 2451 tgggagtttgatggtttccctcaaagcatctaaagtctgtccagctcgagcaagcctata 2392 Query: 529 aatgtgaagaatagcttcaagctgtctcagtacaatttgctgttcagaaatgagatcctt 588 || || ||||||||||||||||||||||||||| |||| || ||||| ||||| ||||| Sbjct: 2391 gatatggagaatagcttcaagctgtctcagtacagtttgttgctcagatatgaggtcctt 2332 Query: 589 gtcttgaacactggcttcagaagaatatctggctgtctccaaaatttcattgccagattg 648 |||||||||||||||||| ||||||||||| || |||| ||||||||| ||||| || Sbjct: 2331 gtcttgaacactggcttc---cgaatatctggcagtttccataatttcattaccagaatg 2275 Query: 649 aattagaccaacagcacggctttctccatctaacatattgtgtgccagggcacatactgc 708 ||||||| || ||||||| ||||| |||||||||||| || |||||| |||||||| ||| Sbjct: 2274 aattagagcagcagcacgactttcaccatctaacatactgcgtgccatggcacatattgc 2215 Query: 709 atccga 714 |||||| Sbjct: 2214 atccga 2209
>gb|AY108425.1| Zea mays PCO146490 mRNA sequence Length = 775 Score = 490 bits (247), Expect = e-135 Identities = 442/507 (87%) Strand = Plus / Minus Query: 228 ttcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgc 287 ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 609 ttcatatgcactgtgccaccttctgatacaaatcctgtggccaattccggctcatgttgc 550 Query: 288 ttgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaa 347 |||| |||||||| || |||||||| |||||||| |||| ||||||||| |||||||||| Sbjct: 549 ttgctacaaggtttgcgatctttgatttgacagcgcgcaaggtcccatcagtatctctaa 490 Query: 348 cattgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatggg 407 ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 489 cattgtcaatgcaatttagagcaaccttcaggagatctggcacgcaagcttgaacatggg 430 Query: 408 gtgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaa 467 |||| || |||||||| | || || | ||||| |||| || || ||||||||||| | Sbjct: 429 gtgacaagttcctgaaaatgtcaacagtcacatttggagccttggggtccaaatgaagga 370 Query: 468 atggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctat 527 | || || ||||||||||||||| ||| || |||||||| ||||| ||||||||||||| Sbjct: 369 agggtagcctgatggtttccctcaaagcatctacagtttgcccagctcgagctagcctat 310 Query: 528 aaatgtgaagaatagcttcaagctgtctcagtacaatttgctgttcagaaatgagatcct 587 |||| || ||||||||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 309 aaatatggagaatagcttcaagctgtctcagcacagtttgttgctcagaaatgaggtcct 250 Query: 588 tgtcttgaacactggcttcagaagaatatctggctgtctccaaaatttcattgccagatt 647 | ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 249 tctcttgaatgctggcttcagaagagtatctagctgtctccaaaatttcattgccagaat 190 Query: 648 gaattagaccaacagcacggctttctccatctaacatattgtgtgccagggcacatactg 707 ||||||| || ||||||| || || |||||||||||| | |||||| |||||| |||| Sbjct: 189 gaattagggcagcagcacgactctcgccatctaacatactccgtgccatggcacagactg 130 Query: 708 catccgataaacacttgtttactgtct 734 |||| || || |||||||||| ||||| Sbjct: 129 catcagacaagcacttgtttattgtct 103
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 323 bits (163), Expect = 5e-85 Identities = 262/295 (88%) Strand = Plus / Plus Query: 307 ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 366 |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || ||||| Sbjct: 13075933 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13075992 Query: 367 agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 426 ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 13075993 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13076052 Query: 427 atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 486 ||| |||| ||||| |||| ||| |||||||||||||||||||| |||||||||||||| Sbjct: 13076053 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13076112 Query: 487 cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 546 ||||| ||| || | ||| |||||||| ||||| |||||||| || || ||||||||||| Sbjct: 13076113 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13076172 Query: 547 aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacactg 601 |||||||||||||||| |||| || ||||| ||||| |||||||||||||||||| Sbjct: 13076173 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacactg 13076227 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 229 tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 288 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 13075155 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13075214 Query: 289 tgccacaaggtt 300 |||||| ||||| Sbjct: 13075215 tgccacgaggtt 13075226 Score = 103 bits (52), Expect = 8e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 611 gaatatctggctgtctccaaaatttcattgccagattgaattagaccaacagcacggctt 670 ||||||||||| || |||| ||||||||| ||||| ||||||||| || ||||||| ||| Sbjct: 13076330 gaatatctggcagtttccataatttcattaccagaatgaattagagcagcagcacgactt 13076389 Query: 671 tctccatctaacatattgtgtgccagggcacatactgcatccga 714 || |||||||||||| || |||||| |||||||| ||||||||| Sbjct: 13076390 tcaccatctaacatactgcgtgccatggcacatattgcatccga 13076433
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 323 bits (163), Expect = 5e-85 Identities = 262/295 (88%) Strand = Plus / Minus Query: 307 ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 366 |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || ||||| Sbjct: 150683 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 150624 Query: 367 agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 426 ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 150623 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 150564 Query: 427 atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 486 ||| |||| ||||| |||| ||| |||||||||||||||||||| |||||||||||||| Sbjct: 150563 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 150504 Query: 487 cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 546 ||||| ||| || | ||| |||||||| ||||| |||||||| || || ||||||||||| Sbjct: 150503 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 150444 Query: 547 aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacactg 601 |||||||||||||||| |||| || ||||| ||||| |||||||||||||||||| Sbjct: 150443 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacactg 150389 Score = 103 bits (52), Expect = 8e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 611 gaatatctggctgtctccaaaatttcattgccagattgaattagaccaacagcacggctt 670 ||||||||||| || |||| ||||||||| ||||| ||||||||| || ||||||| ||| Sbjct: 150286 gaatatctggcagtttccataatttcattaccagaatgaattagagcagcagcacgactt 150227 Query: 671 tctccatctaacatattgtgtgccagggcacatactgcatccga 714 || |||||||||||| || |||||| |||||||| ||||||||| Sbjct: 150226 tcaccatctaacatactgcgtgccatggcacatattgcatccga 150183
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 323 bits (163), Expect = 5e-85 Identities = 262/295 (88%) Strand = Plus / Plus Query: 307 ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 366 |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || ||||| Sbjct: 13072708 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13072767 Query: 367 agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 426 ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 13072768 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13072827 Query: 427 atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 486 ||| |||| ||||| |||| ||| |||||||||||||||||||| |||||||||||||| Sbjct: 13072828 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13072887 Query: 487 cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 546 ||||| ||| || | ||| |||||||| ||||| |||||||| || || ||||||||||| Sbjct: 13072888 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13072947 Query: 547 aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacactg 601 |||||||||||||||| |||| || ||||| ||||| |||||||||||||||||| Sbjct: 13072948 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacactg 13073002 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 229 tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 288 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 13071930 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13071989 Query: 289 tgccacaaggtt 300 |||||| ||||| Sbjct: 13071990 tgccacgaggtt 13072001 Score = 103 bits (52), Expect = 8e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 611 gaatatctggctgtctccaaaatttcattgccagattgaattagaccaacagcacggctt 670 ||||||||||| || |||| ||||||||| ||||| ||||||||| || ||||||| ||| Sbjct: 13073105 gaatatctggcagtttccataatttcattaccagaatgaattagagcagcagcacgactt 13073164 Query: 671 tctccatctaacatattgtgtgccagggcacatactgcatccga 714 || |||||||||||| || |||||| |||||||| ||||||||| Sbjct: 13073165 tcaccatctaacatactgcgtgccatggcacatattgcatccga 13073208
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 323 bits (163), Expect = 5e-85 Identities = 262/295 (88%) Strand = Plus / Plus Query: 307 ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 366 |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || ||||| Sbjct: 153631 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 153690 Query: 367 agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 426 ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 153691 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 153750 Query: 427 atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 486 ||| |||| ||||| |||| ||| |||||||||||||||||||| |||||||||||||| Sbjct: 153751 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 153810 Query: 487 cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 546 ||||| ||| || | ||| |||||||| ||||| |||||||| || || ||||||||||| Sbjct: 153811 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 153870 Query: 547 aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacactg 601 |||||||||||||||| |||| || ||||| ||||| |||||||||||||||||| Sbjct: 153871 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacactg 153925 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 229 tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 288 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 152853 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 152912 Query: 289 tgccacaaggtt 300 |||||| ||||| Sbjct: 152913 tgccacgaggtt 152924 Score = 103 bits (52), Expect = 8e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 611 gaatatctggctgtctccaaaatttcattgccagattgaattagaccaacagcacggctt 670 ||||||||||| || |||| ||||||||| ||||| ||||||||| || ||||||| ||| Sbjct: 154028 gaatatctggcagtttccataatttcattaccagaatgaattagagcagcagcacgactt 154087 Query: 671 tctccatctaacatattgtgtgccagggcacatactgcatccga 714 || |||||||||||| || |||||| |||||||| ||||||||| Sbjct: 154088 tcaccatctaacatactgcgtgccatggcacatattgcatccga 154131
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete sequence Length = 105618 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 365 agagcaaccttcaggagatctggcacacaagcttgaacatggggtgataaatt 417 ||||||||||||| ||| ||||| | ||||||||| ||||| || |||||||| Sbjct: 48601 agagcaaccttcaagaggtctggtatacaagcttggacatgaggagataaatt 48653 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 622 tgtctccaaaatttcattgccagattgaattagaccaacagcacggctttctccatctaa 681 |||||||||||| || |||||||| || || |||||| ||| ||||| || |||||||| Sbjct: 49438 tgtctccaaaatctcgttgccagaatggataagaccagcagtccggctctcaccatctaa 49497 Query: 682 c 682 | Sbjct: 49498 c 49498
>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete sequence Length = 127587 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 ccttcaactacctgttcaaatg 157 |||||||||||||||||||||| Sbjct: 116078 ccttcaactacctgttcaaatg 116057
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence Length = 172914 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 342 ctctaacattgtccatgcagtttaga 367 |||||||||||| ||||||||||||| Sbjct: 139697 ctctaacattgtacatgcagtttaga 139672
>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds Length = 881 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 accttcaactacctgttcaaat 156 |||||||||||||||||||||| Sbjct: 666 accttcaactacctgttcaaat 645
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 342 ctctaacattgtccatgcagtttaga 367 |||||||||||| ||||||||||||| Sbjct: 133427 ctctaacattgtacatgcagtttaga 133452
>emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chromosome 6 Contains a novel gene, complete sequence Length = 88711 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 aacaagacagacatggttcca 96 ||||||||||||||||||||| Sbjct: 87086 aacaagacagacatggttcca 87106
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3' part of a novel gene, complete sequence Length = 157929 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 aacaagacagacatggttcca 96 ||||||||||||||||||||| Sbjct: 375 aacaagacagacatggttcca 395
>emb|AL356500.14| Human DNA sequence from clone RP11-307G7 on chromosome 1, complete sequence Length = 41741 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 456 ccaaatgaagaaatggaagtttgat 480 ||||||||||||||||||| ||||| Sbjct: 34755 ccaaatgaagaaatggaaggttgat 34731
>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83627 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 gtgataaattcctgaatacat 428 ||||||||||||||||||||| Sbjct: 32634 gtgataaattcctgaatacat 32614
>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains the 3' end of the Slit3 gene for slit homolog 3 (Drosophila), complete sequence Length = 113164 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 gatagcccatttccctagcac 207 ||||||||||||||||||||| Sbjct: 16 gatagcccatttccctagcac 36
>emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chromosome 11 Contains part of the Slit3 gene for slit homolog 3 (Drosophila), complete sequence Length = 89624 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 gatagcccatttccctagcac 207 ||||||||||||||||||||| Sbjct: 87640 gatagcccatttccctagcac 87660
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence Length = 158297 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tgaaaagtggcagttttcttg 46 ||||||||||||||||||||| Sbjct: 92560 tgaaaagtggcagttttcttg 92540
>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence Length = 175840 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aaacaagacagacatggttcc 95 ||||||||||||||||||||| Sbjct: 10044 aaacaagacagacatggttcc 10064
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209961 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 gatagcccatttccctagcac 207 ||||||||||||||||||||| Sbjct: 113002 gatagcccatttccctagcac 112982
>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence Length = 175579 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aaacaagacagacatggttcc 95 ||||||||||||||||||||| Sbjct: 97179 aaacaagacagacatggttcc 97199
>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146120 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 gatagcccatttccctagcac 207 ||||||||||||||||||||| Sbjct: 94042 gatagcccatttccctagcac 94022
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 tacctgttcaaatggtgttgg 164 ||||||||||||||||||||| Sbjct: 6168 tacctgttcaaatggtgttgg 6188 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,262,348 Number of Sequences: 3902068 Number of extensions: 7262348 Number of successful extensions: 141249 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141131 Number of HSP's gapped (non-prelim): 117 length of query: 734 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 711 effective length of database: 17,143,297,704 effective search space: 12188884667544 effective search space used: 12188884667544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)