>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLES 105
           KPETGEVIGVFES+QPSDTDLG KAPKDVK QGVWYAQLES
Sbjct: 289 KPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVFES+QPSDTDLG KAPKDVK QG+WYAQLE
Sbjct: 290 KPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVFES+QPSDTDLG K PKDVK QG+WYAQLE
Sbjct: 293 KPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332

>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVFES+QPSDTDLG K PKDVK QG+WYAQLE
Sbjct: 290 KPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329

>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -1

Query: 224 PETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLES 105
           P+TGEVIGVFES+QPSDTDLG K PKDVK QG+WYAQLES
Sbjct: 294 PQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333

>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVFES+QPSDTDLG K PKDVK QGVWY QLE
Sbjct: 293 KPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332

>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVFES+QPSDTDLG K PKDVK QGVWY Q+E
Sbjct: 292 KPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331

>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLESN 102
           KPETGEVIGVFESVQPSDTDL  +APKDVK QGVWYAQLESN
Sbjct: 286 KPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325

>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -1

Query: 227 KPETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           KPETGEVIGVF+S+QPSDTDLG K PKDVK +GVWYAQLE
Sbjct: 291 KPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330

>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 221 ETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQL 111
           ETGE+ GVFES+QPSDTDLG K PKD+K  GVWYAQ+
Sbjct: 298 ETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334

>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = -1

Query: 224 PETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           P TGE+ GVFES+QPSDTDLG K PKD+K  G+WYAQL+
Sbjct: 253 PVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291

>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQL 111
           TGE+ GVFES+QPSDTDLG K PKD+K  G+WY QL
Sbjct: 256 TGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291

>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLESN 102
           TGE+ G+FES QPSDTDLG K P DVK +G++Y +++++
Sbjct: 235 TGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273

>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           +GE+ G FES QPSDTDLG   PK+VK +G++YA++E
Sbjct: 237 SGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273

>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/36 (61%), Positives = 30/36 (83%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQL 111
           TGE+ GVF+S QPSDTDLG K P +VK +G++YA++
Sbjct: 236 TGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271

>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           TGEV GVF ++QPSDTD+G K   DVK  G +Y ++E
Sbjct: 237 TGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273

>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           TGE+ G FES Q SD D+G   P +VK QGV+YA +E
Sbjct: 234 TGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -1

Query: 218 TGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWYAQLE 108
           TGE+ G FES Q SD D+G   P +VK QGV+YA +E
Sbjct: 234 TGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 1   YTHKHIVASILSSPPXNPRMHAQKMSILTSAML*LDSSCAYHTPWXLTSLGALXPRSVSD 180
           Y H     S ++ PP  P +  Q+M+  TS+     ++     PW  +S  A+ P + S 
Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528

Query: 181 GCTLSKTPITSPVSGL 228
             + S +  +SP + +
Sbjct: 529 ASSSSSSSASSPAAAV 544

>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1)
          Length = 373

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 185 QPSDTDLGXKAPKDVKXQGVWYAQLESN*SIAEVK--ILIFCACIR 54
           QP    +     KD+K +G W +Q + N S  E K  ILI C  IR
Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336

>TIBA_ECOLI (Q9XD84) Adhesin/invasin tibA precursor (Glycoprotein tibA)|
          Length = 989

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 221 ETGEVIGVFESVQPSDTDLGXKAPKDVKXQGVWY 120
           E G  + VF+  Q SDT +G     DV+  GV Y
Sbjct: 347 ENGGYLTVFDGHQASDTMVGSDGTLDVRSGGVLY 380

>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38)
          Length = 373

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 185 QPSDTDLGXKAPKDVKXQGVWYAQLESN*SIAEVKILIFCAC 60
           QP    +     KD+K +G W +Q + N S  E K LI   C
Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,381,887
Number of Sequences: 219361
Number of extensions: 391678
Number of successful extensions: 1094
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)