ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdc04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving pr... 272 4e-70
2ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predic... 170 1e-39
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-39
4dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-39
5dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
6dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
7dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
8dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
9dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
10dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
11dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
12dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
13dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
14dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
15gb|AY109341.1| Zea mays CL4601_3 mRNA sequence 141 1e-30
16dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving prot... 66 5e-08
17dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.048
18dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
19emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene 44 0.19
20ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING EN... 40 2.9
21gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence 40 2.9
22gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, comp... 40 2.9
23gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen... 40 2.9
24gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen... 40 2.9
25gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, com... 40 2.9
26gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 m... 40 2.9
27gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, com... 40 2.9
28gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen... 40 2.9
29gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, com... 40 2.9
30gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 m... 40 2.9
31emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Co... 40 2.9
32emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Co... 40 2.9
33emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Co... 40 2.9
34emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Co... 40 2.9
35gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete s... 40 2.9
36dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 2.9
37emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving pr... 40 2.9 
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II
          Length = 1217

 Score =  272 bits (137), Expect = 4e-70
 Identities = 199/220 (90%), Gaps = 8/220 (3%)
 Strand = Plus / Minus

                                                                        
Query: 12   acacattgtngcctcgattctttcctctccaccgnccaacccacgtatgcatgcacaaaa 71
            ||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||||||| ||
Sbjct: 1094 acacattgttgcctcgattgtttcctctccaccgatcaacccacgtacgcatgcacacaa 1035

                                                                        
Query: 72   gat--gagtatcttgacttctgctatgctctagttagactcgagctgcgcgtaccacaca 129
            |||  ||   |||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1034 gataggatcttcttcacttctgctctgctctagttagactcgagctgcgcgtaccacaca 975

                                                                        
Query: 130  ccctggntcttgacatccttgggcgccttgnngccgaggtcggtgtctgacggctgcacg 189
            |||||| |||||||||||||||||||||      ||||||||||||||||||||||||||
Sbjct: 974  ccctggatcttgacatccttgggcgcct------cgaggtcggtgtctgacggctgcacg 921

                                                    
Query: 190  ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
            |||||||||||||| |||||||||||||||||||||||||
Sbjct: 920  ctctcgaagacgccgatcacctcgccggtctccggcttgc 881
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>ref|NM_193698.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1002

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 940  ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881

               
Query: 227  tgc 229
            |||
Sbjct: 880  tgc 878
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                            
Query: 107      actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
                |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577

                                                                            
Query: 167      ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
                |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517

                   
Query: 227      tgc 229
                |||
Sbjct: 17346516 tgc 17346514
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>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1080D07
          Length = 173856

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                          
Query: 107    actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
              |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838

                                                                          
Query: 167    ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
              |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778

                 
Query: 227    tgc 229
              |||
Sbjct: 112777 tgc 112775
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>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full
            insert sequence
          Length = 1286

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946

               
Query: 227  tgc 229
            |||
Sbjct: 945  tgc 943
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>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full
            insert sequence
          Length = 1217

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953

               
Query: 227  tgc 229
            |||
Sbjct: 952  tgc 950
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>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full
            insert sequence
          Length = 1293

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953

               
Query: 227  tgc 229
            |||
Sbjct: 952  tgc 950
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>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full
            insert sequence
          Length = 1292

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950

               
Query: 227  tgc 229
            |||
Sbjct: 949  tgc 947
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>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full
            insert sequence
          Length = 1272

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 989  ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930

               
Query: 227  tgc 229
            |||
Sbjct: 929  tgc 927
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>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full
            insert sequence
          Length = 1159

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 989  ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930

               
Query: 227  tgc 229
            |||
Sbjct: 929  tgc 927
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>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full
            insert sequence
          Length = 1290

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950

               
Query: 227  tgc 229
            |||
Sbjct: 949  tgc 947
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>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full
            insert sequence
          Length = 1313

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 992  ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933

               
Query: 227  tgc 229
            |||
Sbjct: 932  tgc 930
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>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full
            insert sequence
          Length = 1332

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955

               
Query: 227  tgc 229
            |||
Sbjct: 954  tgc 952
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>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full
            insert sequence
          Length = 1208

 Score =  170 bits (86), Expect = 1e-39
 Identities = 113/123 (91%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||
Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950

               
Query: 227  tgc 229
            |||
Sbjct: 949  tgc 947
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>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence
          Length = 1460

 Score =  141 bits (71), Expect = 1e-30
 Identities = 108/123 (87%)
 Strand = Plus / Minus

                                                                        
Query: 107  actcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccga 166
            |||||||||| |||||||| |     ||| |||||||||||||||||||||||   ||||
Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263

                                                                        
Query: 167  ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 226
            |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203

               
Query: 227  tgc 229
            |||
Sbjct: 1202 tgc 1200
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>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence
          Length = 328

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 111 gagctgcgcgtaccacacaccctggntcttgacatccttgggcgcctt 158
           |||||||||||||||||| || ||| ||||||||||||||||| ||||
Sbjct: 86  gagctgcgcgtaccacaccccttggatcttgacatccttgggcacctt 39
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>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194,
             complete sequence
          Length = 108277

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 98/124 (79%)
 Strand = Plus / Plus

                                                                         
Query: 106   gactcgagctgcgcgtaccacacaccctggntcttgacatccttgggcgccttgnngccg 165
             ||||||||||| || ||||| || |||||| |||| |||||||| || || ||    || 
Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623

                                                                         
Query: 166   aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggc 225
             |  || ||||| |||||||| | ||||||||| || || |||||||| ||||| || |||
Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683

                 
Query: 226   ttgc 229
             ||||
Sbjct: 66684 ttgc 66687
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>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0507H06
          Length = 136351

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 107 actcgagctgcgcgtaccacac 128
           ||||||||||||||||||||||
Sbjct: 28  actcgagctgcgcgtaccacac 7
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>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene
          Length = 1520

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 172  gtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 229
            ||||| |||||||| |  |||||||| || || |||||||| || |||||||||||||
Sbjct: 1349 gtgtccgacggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 1292
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>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570
            (PSBO-1) mRNA, complete cds
          Length = 1239

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 190  ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
            |||||||| || || |||||||| || |||||||||||||
Sbjct: 1000 ctctcgaacactccgatcacctctcctgtctccggcttgc 961
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>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence
          Length = 744

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 659 ctctcgaacactccgatcacctctcctgtctccggcttgc 620
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>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence
          Length = 252659

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      tacacacacaaacacattgt 20
              ||||||||||||||||||||
Sbjct: 110154 tacacacacaaacacattgt 110173
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>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex
           (OEC) in photosystem II (At5g66570) mRNA, complete cds
          Length = 1031

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 914 ctctcgaacactccgatcacctctcctgtctccggcttgc 875
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>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex
           (OEC) in photosystem II (At5g66570) mRNA, complete cds
          Length = 1114

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 959 ctctcgaacactccgatcacctctcctgtctccggcttgc 920
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>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds
          Length = 999

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 914 ctctcgaacactccgatcacctctcctgtctccggcttgc 875
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>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 948 ctctcgaacactccgatcacctctcctgtctccggcttgc 909
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>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds
          Length = 1156

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 954 ctctcgaacactccgatcacctctcctgtctccggcttgc 915
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>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex
           (At5g66570; K1F13.25) mRNA, complete cds
          Length = 1118

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 950 ctctcgaacactccgatcacctctcctgtctccggcttgc 911
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>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds
          Length = 1132

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 948 ctctcgaacactccgatcacctctcctgtctccggcttgc 909
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>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 948 ctctcgaacactccgatcacctctcctgtctccggcttgc 909
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>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB75ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1088

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgc 908
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>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS24ZC09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1499

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 190  ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
            |||||||| || || |||||||| || |||||||||||||
Sbjct: 1330 ctctcgaacactccgatcacctctcctgtctccggcttgc 1291
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>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS93ZC11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1099

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 939 ctctcgaacactccgatcacctctcctgtctccggcttgc 900
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>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZC06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1099

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 930 ctctcgaacactccgatcacctctcctgtctccggcttgc 891
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>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence
          Length = 1202

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 190  ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
            |||||||| || || |||||||| || |||||||||||||
Sbjct: 1000 ctctcgaacactccgatcacctctcctgtctccggcttgc 961
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>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13
          Length = 83511

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 190   ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
             |||||||| || || |||||||| || |||||||||||||
Sbjct: 58955 ctctcgaacactccgatcacctctcctgtctccggcttgc 58916
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>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein
          Length = 1140

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 190 ctctcgaagacgcctatcacctcgccggtctccggcttgc 229
           |||||||| || || |||||||| || |||||||||||||
Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgc 908


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,688,018
Number of Sequences: 3902068
Number of extensions: 1688018
Number of successful extensions: 108329
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108278
Number of HSP's gapped (non-prelim): 51
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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