| Clone Name | rbasdb04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF009675.1|AF009675 Hordeum vulgare var. distichum soluble inorganic pyrophosphatase (Ipp) mRNA, complete cds Length = 1035 Score = 577 bits (291), Expect = e-162 Identities = 338/351 (96%), Gaps = 6/351 (1%) Strand = Plus / Minus Query: 10 cttnataaatagtgtgagtacacattgttgcgcatttatttataacacacatagtctcgg 69 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 cttcataaatagtgtgagtacacattgttgcgcatttatttataacacacatagtctcgg 944 Query: 70 ctattccccacttgttattaatacaagatttccgcgatacaaccaccaacatgctactgc 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 ctattccccacttgttattaatacaagatttccgcgatacaaccaccaacatgctactgc 884 Query: 130 cttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggcctcgcgg 189 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 cttaagctttgcagaatatactgcgcatacaggtccatcgaatactgaatggcctcgcgg 824 Query: 190 gcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgtag 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 gcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgtag 764 Query: 250 tcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgttg 309 |||||| | ||||||||||||||||||||| |||||| |||||||||||| | || Sbjct: 763 tcttca---aggcgcttgatctcttggaggcg--tgggagaaggctcactgatgt-gctg 710 Query: 310 tagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 tagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 659
>gb|BT016734.1| Zea mays clone Contig567 mRNA sequence Length = 924 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| |||||||||||||||||| ||||| || ||||||||||| Sbjct: 768 ctactgcctcaagctttgcaaaatatactgcgcatacagatccatggagtactgaatggc 709 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 ||| || || ||||||||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 708 ctctcgagctgtggtcgcaggcaagaatgcatcgacagcaacctctttattctcattctt 649 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||| || ||||||||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 648 cttataatcttcaaagaaccgcttgatctcttgcaggcgatgaggagacagctcactgat 589 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 588 gtcgttgtagtgacgatattcaggatcatcagcacagactgctattatcttgtcatcc 531
>gb|AY103741.1| Zea mays PCO131913 mRNA sequence Length = 1163 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| |||||||||||||||||| ||||| || ||||||||||| Sbjct: 808 ctactgcctcaagctttgcaaaatatactgcgcatacagatccatggagtactgaatggc 749 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 ||| || || ||||||||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 748 ctctcgagctgtggtcgcaggcaagaatgcatcgacagcaacctctttattctcattctt 689 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||| || ||||||||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 688 cttataatcttcaaagaaccgcttgatctcttgcaggcgatgaggagacagctcactgat 629 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 628 gtcgttgtagtgacgatattcaggatcatcagcacagactgctattatcttgtcatcc 571
>gb|AF034947.1|AF034947 Zea mays inorganic pyrophosphatase (IPP) mRNA, complete cds Length = 942 Score = 289 bits (146), Expect = 3e-75 Identities = 215/238 (90%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| |||||||||||||||||| ||||| || ||||||||||| Sbjct: 760 ctactgcctcaagctttgcaaaatatactgcgcatacagatccatggagtactgaatggc 701 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 ||| || || ||||||||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 700 ctctcgagctgtggtcgcaggcaagaatgcatcgacagcaacctctttattctcattctt 641 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||| || ||||||||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 640 cttataatcttcaaagaaccgcttgatctcttgcaggcgatgaggagacagctcactgat 581 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 580 gtcgttgtagtgacgatattcaggatcatcagcacagactgctattatcttgtcatcc 523
>ref|XM_474434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 642 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 642 ctactgcctcaagctttgcaagatatattgcgcatacaggtccatggagtactgaatggc 583 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 || || |||||| | ||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 582 gtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttgttctcattctt 523 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 522 cttgtagtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgat 463 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||| ||||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 462 gtcattgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 405
>dbj|AK073929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D22, full insert sequence Length = 938 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 735 ctactgcctcaagctttgcaagatatattgcgcatacaggtccatggagtactgaatggc 676 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 || || |||||| | ||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 675 gtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttgttctcattctt 616 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 615 cttgtagtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgat 556 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||| ||||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 555 gtcattgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 498
>dbj|AK061239.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C05, full insert sequence Length = 935 Score = 281 bits (142), Expect = 8e-73 Identities = 214/238 (89%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 733 ctactgcctcaagctttgcaagatatattgcgcatacaggtccatggagtactgaatggc 674 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 || || |||||| | ||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 673 gtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttgttctcattctt 614 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 613 cttgtagtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgat 554 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||| ||||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 553 gtcattgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 496
>gb|AY570726.1| Oryza sativa (japonica cultivar-group) inorganic pyrophosphatase (Ipp) mRNA, partial cds Length = 721 Score = 250 bits (126), Expect = 3e-63 Identities = 183/202 (90%) Strand = Plus / Minus Query: 159 caggtccatcgaatactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcgac 218 ||||||||| || ||||||||||| || || |||||| | ||||| ||||| ||||| || Sbjct: 697 caggtccatggagtactgaatggcgtcacgagcagtgttggcaggcaagaatgcatcaac 638 Query: 219 agcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttggag 278 ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 637 agcaacctccttgttctcattcttcttgtagtcttcaaagaagcgtttaatctcttggag 578 Query: 279 gcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgcgca 338 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || || Sbjct: 577 gcggtgaggagacagctcactgatgtcattgtaatgacggtattcaggatcatcagcaca 518 Query: 339 gactgctattatcttgtcatcc 360 ||||||||||||||||||||| Sbjct: 517 tactgctattatcttgtcatcc 496
>gb|BT019269.1| Zea mays clone Contig942.F mRNA sequence Length = 1122 Score = 242 bits (122), Expect = 6e-61 Identities = 209/238 (87%) Strand = Plus / Plus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| ||||||||| |||||||||||||| || ||||||||||| Sbjct: 374 ctactgcctcaagctttgcaaaatatactgggcatacaggtccatggagtactgaatggc 433 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 || | || || ||||| || ||||| ||||| || ||||| || |||||||| || || Sbjct: 434 ttcttgagctgttgtcgcgggcaagaatgcatcaactgcgacttctttgttctcgttttt 493 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 |||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 494 cttgtaatcttcaaagaagcgcttgatctcttgcaggcggtgaggagacagctcgctgat 553 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 554 gtcgttgtagtgacggtattcaggatcgtcagcacatactgctattatcttgtcatcc 611
>gb|BT017161.1| Zea mays clone EL01N0368C05.c mRNA sequence Length = 654 Score = 186 bits (94), Expect = 3e-44 Identities = 202/238 (84%) Strand = Plus / Minus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggc 182 ||||||||| ||||| |||| ||||||||| |||||||||||||| || ||||||||||| Sbjct: 276 ctactgcctcaagctttgcaaaatatactgggcatacaggtccatggagtactgaatggc 217 Query: 183 ctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattctt 242 || | || || ||||| || || || ||||| || ||||| || |||||||| || || Sbjct: 216 ttcttgagctgttgtcgcgggcaaaaatgcatcaactgcgacttctttgttctcgttttt 157 Query: 243 cttgtagtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgat 302 |||| | |||||||| ||||||||||||||||| ||| || | ||| ||||||| ||||| Sbjct: 156 cttggaatcttcaaaaaagcgcttgatctcttgcagggggggaggaaacagctcgctgat 97 Query: 303 gtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||||||||||||||||||||||| || || || ||||||||||||||| ||||| Sbjct: 96 gtcgttgtagtgacggtattcaggatcgtcagcacatactgctattatcttggcatcc 39
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 92952 agtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgatgtcat 93011 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 |||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 93012 tgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 93064 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 172 tactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttg 231 ||||||||||| || || |||||| | ||||| ||||| ||||| ||||| ||||||||| Sbjct: 92776 tactgaatggcgtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttg 92835 Query: 232 ttctcattcttcttgt 247 |||||||||||||||| Sbjct: 92836 ttctcattcttcttgt 92851 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtcc 165 ||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 92595 ctactgcctcaagctttgcaagatatattgcgcatacaggtcc 92637
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 35156455 agtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgatgtcat 35156514 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 |||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 35156515 tgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 35156567 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 172 tactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttg 231 ||||||||||| || || |||||| | ||||| ||||| ||||| ||||| ||||||||| Sbjct: 35156279 tactgaatggcgtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttg 35156338 Query: 232 ttctcattcttcttgt 247 |||||||||||||||| Sbjct: 35156339 ttctcattcttcttgt 35156354 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtcc 165 ||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 35156098 ctactgcctcaagctttgcaagatatattgcgcatacaggtcc 35156140
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 111881 agtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgatgtcat 111940 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 |||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 111941 tgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 111993 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 172 tactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttg 231 ||||||||||| || || |||||| | ||||| ||||| ||||| ||||| ||||||||| Sbjct: 111705 tactgaatggcgtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttg 111764 Query: 232 ttctcattcttcttgt 247 |||||||||||||||| Sbjct: 111765 ttctcattcttcttgt 111780 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtcc 165 ||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 111524 ctactgcctcaagctttgcaagatatattgcgcatacaggtcc 111566
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 161 bits (81), Expect = 2e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 25708 agtcttcaaagaagcgtttaatctcttggaggcggtgaggagacagctcactgatgtcat 25767 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 |||| |||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 25768 tgtaatgacggtattcaggatcatcagcacatactgctattatcttgtcatcc 25820 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 172 tactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcgacagcgacctccttg 231 ||||||||||| || || |||||| | ||||| ||||| ||||| ||||| ||||||||| Sbjct: 25532 tactgaatggcgtcacgagcagtgttggcaggcaagaatgcatcaacagcaacctccttg 25591 Query: 232 ttctcattcttcttgt 247 |||||||||||||||| Sbjct: 25592 ttctcattcttcttgt 25607 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 ctactgccttaagctctgcagaatatactgcgcatacaggtcc 165 ||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 25351 ctactgcctcaagctttgcaagatatattgcgcatacaggtcc 25393
>ref|XM_475313.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 135 bits (68), Expect = 1e-28 Identities = 188/228 (82%) Strand = Plus / Minus Query: 133 aagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggcctcgcgggca 192 |||||||||||||| ||||| || ||||| ||||| || ||||| || || || || || Sbjct: 665 aagctctgcagaatgtactgtgcgtacagatccatagagtactggattgcttcacgagct 606 Query: 193 gtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgtagtct 252 || | ||||| ||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct: 605 gtcggagcaggcaagaagtcattgacagcaacctccttgttctcattcttcttgtagtct 546 Query: 253 tcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgttgtag 312 |||||||||||| ||| || || ||||| || ||||| ||||| |||| | ||| | Sbjct: 545 tcaaagaagcgccggatttcctgaaggcgatgaggagaaagctcgctgagattattgaaa 486 Query: 313 tgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 || ||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 485 tggcggtactcaggatcatcggcgcagacagctatgatcttgtcatcc 438
>dbj|AK059951.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B08, full insert sequence Length = 1031 Score = 135 bits (68), Expect = 1e-28 Identities = 188/228 (82%) Strand = Plus / Minus Query: 133 aagctctgcagaatatactgcgcatacaggtccatcgaatactgaatggcctcgcgggca 192 |||||||||||||| ||||| || ||||| ||||| || ||||| || || || || || Sbjct: 754 aagctctgcagaatgtactgtgcgtacagatccatagagtactggattgcttcacgagct 695 Query: 193 gtggtcgcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgtagtct 252 || | ||||| ||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct: 694 gtcggagcaggcaagaagtcattgacagcaacctccttgttctcattcttcttgtagtct 635 Query: 253 tcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgttgtag 312 |||||||||||| ||| || || ||||| || ||||| ||||| |||| | ||| | Sbjct: 634 tcaaagaagcgccggatttcctgaaggcgatgaggagaaagctcgctgagattattgaaa 575 Query: 313 tgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 || ||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 574 tggcggtactcaggatcatcggcgcagacagctatgatcttgtcatcc 527
>ref|NM_183784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 129 bits (65), Expect = 7e-27 Identities = 107/121 (88%) Strand = Plus / Minus Query: 223 acctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttggaggcgg 282 |||| ||| |||||||||||||||||||||||||| ||||| | |||||||||||||| | Sbjct: 152 accttctttttctcattcttcttgtagtcttcaaataagcgttggatctcttggaggcag 93 Query: 283 tggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagact 342 || ||||||| |||| ||||||| |||||||||| || |||||||||||| || |||||| Sbjct: 92 tgaggagacaactcattgatgtcattgtagtgacagtgttcaggatcatcagcacagact 33 Query: 343 g 343 | Sbjct: 32 g 32
>dbj|AK111757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060L20, full insert sequence Length = 1080 Score = 129 bits (65), Expect = 7e-27 Identities = 173/209 (82%) Strand = Plus / Minus Query: 148 tactgcgcatacaggtccatcgaatactgaatggcctcgcgggcagtggtcgcaggtaag 207 ||||| |||||||| ||||| |||||||| ||||| || || |||| |||| |||| | Sbjct: 696 tactgagcatacagatccatggaatactggatggcatcccgagcagcggtcacaggcagt 637 Query: 208 aacgcatcgacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttg 267 | | ||| || |||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct: 636 acctcattcacggcgacctccttgttttcattcttcttgtagtcttcaaagaaacgccgg 577 Query: 268 atctcttggaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcagga 327 || || |||| ||| || || || |||||||||| ||||||||||| ||||| |||||| Sbjct: 576 atttcctggacgcgatgaggcgaaagctcactgagatcgttgtagtggcggtactcagga 517 Query: 328 tcatccgcgcagactgctattatcttgtc 356 || ||| ||||||| ||||| |||||||| Sbjct: 516 tcgtccacgcagacggctatgatcttgtc 488
>ref|NM_190753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 121 bits (61), Expect = 2e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 220 gcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttggagg 279 |||||||||||||| |||||||||||||||||||||||||| ||| ||| || |||| | Sbjct: 545 gcgacctccttgttttcattcttcttgtagtcttcaaagaaacgccggatttcctggacg 486 Query: 280 cggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcag 339 || || || || |||||||||| ||||||||||| ||||| |||||||| ||| ||||| Sbjct: 485 cgatgaggcgaaagctcactgagatcgttgtagtggcggtactcaggatcgtccacgcag 426 Query: 340 actgctattatcttgtc 356 || ||||| |||||||| Sbjct: 425 acggctatgatcttgtc 409
>gb|AY107328.1| Zea mays PCO076731 mRNA sequence Length = 1119 Score = 119 bits (60), Expect = 6e-24 Identities = 165/200 (82%) Strand = Plus / Minus Query: 157 tacaggtccatcgaatactgaatggcctcgcgggcagtggtcgcaggtaagaacgcatcg 216 ||||||||||| || ||||| ||||| |||||||||| || || || | ||| | | | Sbjct: 781 tacaggtccatggagtactggatggcttcgcgggcagcggcggcgggcaggaagtcgttg 722 Query: 217 acagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttgg 276 || || |||||||||||||| ||||||||||||||||| |||||||| |||||| ||| Sbjct: 721 acggccacctccttgttctcgttcttcttgtagtcttcgaagaagcggcggatctcctgg 662 Query: 277 aggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgcg 336 |||||||| || || ||||| ||||||||||||||||| ||||| || || || || ||| Sbjct: 661 aggcggtgaggggagagctcgctgatgtcgttgtagtggcggtactcggggtcgtcggcg 602 Query: 337 cagactgctattatcttgtc 356 ||||| || || |||||||| Sbjct: 601 cagacggcgatgatcttgtc 582
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 118904 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 118845 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 118844 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 118792
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 14553 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 14494 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 14493 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 14441
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 4635487 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 4635546 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 4635547 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 4635599
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 11793264 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 11793205 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 11793204 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 11793152 Score = 65.9 bits (33), Expect = 8e-08 Identities = 93/113 (82%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||||| ||| || || ||||| || ||||| ||||| |||| | | Sbjct: 21348782 agtcttcaaagaagcgccggatttcctgaaggcgatgaggagaaagctcgctgagattat 21348723 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 || | || ||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 21348722 tgaaatggcggtactcaggatcatcggcgcagacagctatgatcttgtcatcc 21348670 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 199 gcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgt 247 ||||| ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 21348928 gcaggcaagaagtcattgacagcaacctccttgttctcattcttcttgt 21348880 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| ||||||||||||||||||||||||| Sbjct: 708774 gacagcaacctccttgttctcattcttcttgt 708805
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 4635468 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 4635527 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 4635528 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 4635580
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| | || ||||||||||| ||| ||||||| ||||| |||||| | Sbjct: 116640 agtcttcaaagaagcattagaactcttggaggcagtgaggagacaactcaccgatgtcat 116581 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 ||||||| | ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 116580 tgtagtggcagtattcaggatcatcagcacaaactgctattatcttgtcatcc 116528
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 9e-17 Identities = 84/96 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||| ||||| | |||||||||||||| ||| ||||||| |||| ||||||| | Sbjct: 12275148 agtcttcaaataagcgttggatctcttggaggcagtgaggagacaactcattgatgtcat 12275207 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactg 343 ||||||||| || |||||||||||| || ||||||| Sbjct: 12275208 tgtagtgacagtgttcaggatcatcagcacagactg 12275243 Score = 73.8 bits (37), Expect = 3e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||| ||| ||| || |||| ||| || || || |||||||||| |||| Sbjct: 37516194 agtcttcaaagaaacgccggatttcctggacgcgatgaggcgaaagctcactgagatcgt 37516253 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtc 356 ||||||| ||||| |||||||| ||| ||||||| ||||| |||||||| Sbjct: 37516254 tgtagtggcggtactcaggatcgtccacgcagacggctatgatcttgtc 37516302 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| |||||||| |||||||||||||||| Sbjct: 43065483 gacagccacctccttattctcattcttcttgt 43065514 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 220 gcgacctccttgttctcattcttcttgt 247 |||||||||||||| ||||||||||||| Sbjct: 37516080 gcgacctccttgttttcattcttcttgt 37516107
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 95.6 bits (48), Expect = 9e-17 Identities = 84/96 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||| ||||| | |||||||||||||| ||| ||||||| |||| ||||||| | Sbjct: 99774 agtcttcaaataagcgttggatctcttggaggcagtgaggagacaactcattgatgtcat 99833 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactg 343 ||||||||| || |||||||||||| || ||||||| Sbjct: 99834 tgtagtgacagtgttcaggatcatcagcacagactg 99869
>ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 653 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 594 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 593 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 534 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 533 acaaacagctatgatcttgtcatc 510
>ref|XM_507522.1| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.39 mRNA Length = 1076 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 686 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 627 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 626 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 567 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 566 acaaacagctatgatcttgtcatc 543
>ref|XM_506930.2| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.39 mRNA Length = 1090 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 661 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 602 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 601 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 542 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 541 acaaacagctatgatcttgtcatc 518
>dbj|AK103984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G06, full insert sequence Length = 1017 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 653 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 594 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 593 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 534 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 533 acaaacagctatgatcttgtcatc 510
>dbj|AK070562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F08, full insert sequence Length = 1090 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 661 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 602 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 601 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 542 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 541 acaaacagctatgatcttgtcatc 518
>dbj|AK061019.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C08, full insert sequence Length = 1076 Score = 87.7 bits (44), Expect = 2e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 686 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 627 Query: 276 gaggcggtggggagacagctcactgatgtcgttgtagtgacggtattcaggatcatccgc 335 |||||||| || | | || ||||||| || |||| ||||||||||| ||||| || Sbjct: 626 aaggcggtgaggggggatttccttgatgtccctgaagtggcggtattcagggtcatcagc 567 Query: 336 gcagactgctattatcttgtcatc 359 || || ||||| ||||||||||| Sbjct: 566 acaaacagctatgatcttgtcatc 543
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 1e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| |||||||| ||||||| ||| |||||| |||| ||||||| | Sbjct: 11058343 agtcttcaaagaagcatttgatctcgtggaggcagtgaggagacgtctcaatgatgtcat 11058402 Query: 308 tgtagtgacggtattcaggatcatc 332 |||||||| ||||||||||||||| Sbjct: 11058403 tgtagtgatagtattcaggatcatc 11058427
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 81.8 bits (41), Expect = 1e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| |||||||| ||||||| ||| |||||| |||| ||||||| | Sbjct: 74779 agtcttcaaagaagcatttgatctcgtggaggcagtgaggagacgtctcaatgatgtcat 74720 Query: 308 tgtagtgacggtattcaggatcatc 332 |||||||| ||||||||||||||| Sbjct: 74719 tgtagtgatagtattcaggatcatc 74695
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 1e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| |||||||| ||||||| ||| |||||| |||| ||||||| | Sbjct: 11055106 agtcttcaaagaagcatttgatctcgtggaggcagtgaggagacgtctcaatgatgtcat 11055165 Query: 308 tgtagtgacggtattcaggatcatc 332 |||||||| ||||||||||||||| Sbjct: 11055166 tgtagtgatagtattcaggatcatc 11055190
>gb|AF093629.1|AF093629 Oryza sativa inorganic pyrophosphatase (IPP) mRNA, complete cds Length = 1025 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttg 275 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 625 gacagcaacttctttgttctcattcttcttgtagtcttcaaagaagcggcggatctcttg 566 Query: 276 gaggcggtg 284 |||||||| Sbjct: 565 aaggcggtg 557
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 81.8 bits (41), Expect = 1e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||| |||||||| ||||||| ||| |||||| |||| ||||||| | Sbjct: 101828 agtcttcaaagaagcatttgatctcgtggaggcagtgaggagacgtctcaatgatgtcat 101887 Query: 308 tgtagtgacggtattcaggatcatc 332 |||||||| ||||||||||||||| Sbjct: 101888 tgtagtgatagtattcaggatcatc 101912
>ref|XM_475082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgat 269 |||||| ||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 558 gacagcaacctccttgttctcattcttcttgtagtcctcaaaaaagcgcctgat 505
>dbj|AK069313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014E07, full insert sequence Length = 1163 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgat 269 |||||| ||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 799 gacagcaacctccttgttctcattcttcttgtagtcctcaaaaaagcgcctgat 746
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 73.8 bits (37), Expect = 3e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||| ||| ||| || |||| ||| || || || |||||||||| |||| Sbjct: 110731 agtcttcaaagaaacgccggatttcctggacgcgatgaggcgaaagctcactgagatcgt 110790 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtc 356 ||||||| ||||| |||||||| ||| ||||||| ||||| |||||||| Sbjct: 110791 tgtagtggcggtactcaggatcgtccacgcagacggctatgatcttgtc 110839 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 220 gcgacctccttgttctcattcttcttgt 247 |||||||||||||| ||||||||||||| Sbjct: 110617 gcgacctccttgttttcattcttcttgt 110644
>gb|AY104537.1| Zea mays PCO143243 mRNA sequence Length = 1221 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 217 acagcgacctccttgttctcattcttcttgtagtcttcaaagaagcgcttgat 269 ||||| ||||||||||||||||||||||||||||| || ||||||||| |||| Sbjct: 751 acagcaacctccttgttctcattcttcttgtagtcctcgaagaagcgcctgat 699
>ref|NM_196419.1| Oryza sativa (japonica cultivar-group) putative soluble inorganic pyrophosphatase (OSJNBa0060A14.9), mRNA Length = 588 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 220 gcgacctccttgttctcattcttcttgtagtcttcaaagaagcg 263 |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 491 gcgacctctttgttttcattcttcttgtagtcttcaaagaagcg 448
>gb|DQ175969.1| Hordeum vulgare subsp. vulgare clone 40-28A-RB flanking T-DNA insertion sequence Length = 703 Score = 71.9 bits (36), Expect = 1e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| |||||| || ||||| || || | || ||||||||||| Sbjct: 242 agtcttcaaagaagcgacggatctcctgtaggcgatgcgggggaagttcactgatgtctc 301 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatc 359 || |||||||||| ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 302 tgaagtgacggtactcaggatcatcagcacagacagctatgatcttgtcatc 353
>dbj|AK072672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138M09, full insert sequence Length = 1161 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 220 gcgacctccttgttctcattcttcttgtagtcttcaaagaagcg 263 |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 579 gcgacctctttgttttcattcttcttgtagtcttcaaagaagcg 536
>ref|NM_116378.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT4G01480 mRNA, complete cds Length = 1014 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||||||||||||||||||||||||||| Sbjct: 633 tccttgttctcattcttcttgtagtcttcaaagaa 599
>emb|AJ225172.1|STMDSIP Solanum tuberosum mRNA for magnesium dependent soluble inorganic pyrophosphatase Length = 1102 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 217 acagcgacctccttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 779 acagcaacctccttgttctcatttttcttgtagtcctcaaagaagcg 733
>gb|AY081667.1| Arabidopsis thaliana similar to inorganic pyrophosphatase (At4g01480) mRNA, complete cds Length = 815 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||||||||||||||||||||||||||| Sbjct: 548 tccttgttctcattcttcttgtagtcttcaaagaa 514
>gb|AY054516.1| Arabidopsis thaliana similar to inorganic pyrophosphatase (At4g01480; F11O4.12) mRNA, complete cds Length = 1009 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||||||||||||||||||||||||||| Sbjct: 633 tccttgttctcattcttcttgtagtcttcaaagaa 599
>emb|BX828444.1|CNS0A2Y5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||||||||||||||||||||||||||| Sbjct: 621 tccttgttctcattcttcttgtagtcttcaaagaa 587
>gb|AF315738.1|AF315738 Arabidopsis thaliana PRLI-interacting factor F mRNA, partial cds Length = 802 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||||||||||||||||||||||||||| Sbjct: 398 tccttgttctcattcttcttgtagtcttcaaagaa 364
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 65.9 bits (33), Expect = 8e-08 Identities = 93/113 (82%) Strand = Plus / Minus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 ||||||||||||||||| ||| || || ||||| || ||||| ||||| |||| | | Sbjct: 66104 agtcttcaaagaagcgccggatttcctgaaggcgatgaggagaaagctcgctgagattat 66045 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 || | || ||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 66044 tgaaatggcggtactcaggatcatcggcgcagacagctatgatcttgtcatcc 65992 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 199 gcaggtaagaacgcatcgacagcgacctccttgttctcattcttcttgt 247 ||||| ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 66250 gcaggcaagaagtcattgacagcaacctccttgttctcattcttcttgt 66202
>emb|AJ298232.1|CRE298232 Chlamydomonas reinhardtii mRNA for soluble inorganic pyrophosphatase (ppaII gene) Length = 834 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 223 acctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttggaggcgg 282 |||||||||| ||| |||||||||||||| || ||||| ||||||||||| |||||| Sbjct: 593 acctccttgtgctcgttcttcttgtagtcctcgaagaaccgcttgatctcggccaggcgg 534 Query: 283 tggggagacagctcactgatgtcg 306 || |||| ||||| ||||||||| Sbjct: 533 tgaggaggcagctggctgatgtcg 510
>gb|AY635929.1| Arachis hypogaea putative inorganic pyrophosphatase mRNA, complete cds Length = 767 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||||||||||||||||||||||| || ||||| Sbjct: 578 tccttgttctcattcttcttgtagtcttcgaaaaagcg 541
>gb|AY574053.1| Populus tomentosa soluble inorganic pyrophosphatase mRNA, complete cds Length = 915 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 223 acctccttgttctcattcttcttgtagtcttcaaagaa 260 |||||||||||||| || |||||||||||||||||||| Sbjct: 592 acctccttgttctcgtttttcttgtagtcttcaaagaa 555
>emb|AJ717307.1| Arachis hypogaea mRNA for putative inorganic pyrophosphatase (pah767 gene) Length = 767 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||||||||||||||||||||||| || ||||| Sbjct: 578 tccttgttctcattcttcttgtagtcttcgaaaaagcg 541
>gb|AF149116.1|AF149116 Populus tremula x Populus tremuloides soluble inorganic pyrophosphatase (ip1) mRNA, complete cds Length = 950 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 223 acctccttgttctcattcttcttgtagtcttcaaagaa 260 |||||||||||||| || |||||||||||||||||||| Sbjct: 593 acctccttgttctcgtttttcttgtagtcttcaaagaa 556
>emb|AM162551.1| Papaver rhoeas mRNA for soluble inorganic pyrophosphatase (p26b gene) Length = 959 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaagcg 263 |||||||| ||||| ||||||||||||||||||||||| Sbjct: 701 tccttgttttcatttttcttgtagtcttcaaagaagcg 664 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 319 tattcaggatcatccgcgcagactgctattatcttgtcatc 359 ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 608 tattcaggatcgtccgcacacactgctatgattttgtcatc 568
>gb|AF022733.1|AF022733 Oryza sativa inorganic pyrophosphatase (Ipp) mRNA, complete cds Length = 1122 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaa 257 |||||| || || ||||||||||||||||||||||||||||| Sbjct: 650 gacagcaacttctttgttctcattcttcttgtagtcttcaaa 609
>emb|AM162550.1| Papaver rhoeas mRNA for soluble inorganic pyrophosphatase (p26a gene) Length = 842 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaagaa 260 |||||| ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 582 gacagcaacctctttgttttcattcttcttgtaatcttcaaagaa 538 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Minus Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatcc 360 |||| ||||||||||| ||||||||||| || ||||| || ||||| |||||| Sbjct: 490 tgtaatgacggtattctggatcatccgcacaaactgcaatgatcttatcatcc 438
>ref|NM_127380.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT2G18230 mRNA, complete cds Length = 1000 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 683 cttgttctcgttcttcttgtagtcctcaaagaagcg 648
>emb|X57545.1|ATINPYPP A.thaliana mRNA for inorganic pyrophosphatase Length = 976 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 664 cttgttctcgttcttcttgtagtcctcaaagaagcg 629
>gb|AY091698.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 657 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 552 cttgttctcgttcttcttgtagtcctcaaagaagcg 517
>gb|AY048209.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 932 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 618 cttgttctcgttcttcttgtagtcctcaaagaagcg 583
>emb|BX819079.1|CNS0A9VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 924 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 666 cttgttctcgttcttcttgtagtcctcaaagaagcg 631
>emb|BX819078.1|CNS0A9VU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 908 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 668 cttgttctcgttcttcttgtagtcctcaaagaagcg 633
>emb|BX819498.1|CNS0A9SC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 659 cttgttctcgttcttcttgtagtcctcaaagaagcg 624
>emb|BX821249.1|CNS0A9BA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 668 cttgttctcgttcttcttgtagtcctcaaagaagcg 633
>gb|AY088579.1| Arabidopsis thaliana clone 8068 mRNA, complete sequence Length = 978 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||||||| |||||||||||||| ||||||||||| Sbjct: 684 cttgttctcgttcttcttgtagtcctcaaagaagcg 649
>gb|AF220202.1|AF220202 Malus domestica soluble inorganic pyrophosphatase mRNA, complete cds Length = 1053 Score = 56.0 bits (28), Expect = 8e-05 Identities = 85/104 (81%) Strand = Plus / Minus Query: 229 ttgttctcattcttcttgtagtcttcaaagaagcgcttgatctcttggaggcggtgggga 288 ||||||||||| ||||||||||| |||||||||||| |||||| | ||||| || Sbjct: 725 ttgttctcatttttcttgtagtcctcaaagaagcgccggatctcagccaaacggtgaggt 666 Query: 289 gacagctcactgatgtcgttgtagtgacggtattcaggatcatc 332 | ||||| ||||||| |||||||| ||||| ||||||||||| Sbjct: 665 gggagctccttgatgtcattgtagtgtcggtactcaggatcatc 622
>gb|AY109015.1| Zea mays PCO123317 mRNA sequence Length = 1277 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 300 gatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatc 359 |||||| |||||||||||| ||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 745 gatgtccttgtagtgacggaattcagggtcatcagcacagacagctatgatcttatcatc 686
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| ||||||||||||||||||||||||| Sbjct: 53973 gacagcaacctccttgttctcattcttcttgt 54004
>emb|Z36894.1|STPPAG S.tuberosum (Desiree) ppa mRNA for soluble inorganic pyrophosphatase Length = 948 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 229 ttgttctcattcttcttgtagtcttcaaagaagcg 263 ||||| ||||||||||||||||||||||| ||||| Sbjct: 608 ttgttttcattcttcttgtagtcttcaaaaaagcg 574 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/52 (86%) Strand = Plus / Minus Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatc 359 ||||||| || ||||| |||||||| || || |||||||| ||||||||||| Sbjct: 529 tgtagtggcgatattctggatcatcagcacacactgctatgatcttgtcatc 478
>emb|AJ344157.1|BVU344157 Beta vulgaris mRNA for soluble pyrophosphatase (ppa1 gene) Length = 1041 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 223 acctccttgttctcattcttcttgtagtcttcaaagaagcgcttgatctc 272 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||||| Sbjct: 687 acctctttgttctcatttttcttgtagtcctcaaaaaagcgtctgatctc 638
>ref|NM_115222.1| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT3G53620 mRNA, complete cds Length = 1294 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 292 agctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatc 351 |||||||||||||||||||| || || || || ||||| || |||||||| || || ||| Sbjct: 763 agctcactgatgtcgttgtaatggcgatactctggatcgtcagcgcagacagcaatgatc 704 Query: 352 ttgtc 356 ||||| Sbjct: 703 ttgtc 699 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || ||||| |||||||||||||| Sbjct: 829 tccttgttctcgtttttcttatagtcttcaaagaa 795
>emb|BX825169.1|CNS0A57B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 292 agctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatc 351 |||||||||||||||||||| || || || || ||||| || |||||||| || || ||| Sbjct: 569 agctcactgatgtcgttgtaatggcgatactctggatcgtcagcgcagacagcaatgatc 510 Query: 352 ttgtc 356 ||||| Sbjct: 509 ttgtc 505
>gb|AY087991.1| Arabidopsis thaliana clone 40186 mRNA, complete sequence Length = 1297 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 292 agctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatc 351 |||||||||||||||||||| || || || || ||||| || |||||||| || || ||| Sbjct: 765 agctcactgatgtcgttgtaatggcgatactctggatcgtcagcgcagacagcaatgatc 706 Query: 352 ttgtc 356 ||||| Sbjct: 705 ttgtc 701 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || ||||| |||||||||||||| Sbjct: 831 tccttgttctcgtttttcttatagtcttcaaagaa 797
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 292 agctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatc 351 |||||||||||||||||||| || || || || ||||| || |||||||| || || ||| Sbjct: 123606 agctcactgatgtcgttgtaatggcgatactctggatcgtcagcgcagacagcaatgatc 123547 Query: 352 ttgtc 356 ||||| Sbjct: 123546 ttgtc 123542
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.020 Identities = 90/112 (80%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| ||||||||| |||||||| || | | || ||||||| Sbjct: 29101010 agtcttcaaagaagcggcggatctcttgaaggcggtgaggggggatttccttgatgtccc 29101069 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatc 359 || |||| ||||||||||| ||||| || || || ||||| ||||||||||| Sbjct: 29101070 tgaagtggcggtattcagggtcatcagcacaaacagctatgatcttgtcatc 29101121 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| || || ||||||||||||||||||| Sbjct: 29100871 gacagcaacttctttgttctcattcttcttgt 29100902
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| |||||||| |||||||||||||||| Sbjct: 62512 gacagccacctccttattctcattcttcttgt 62543
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 48.1 bits (24), Expect = 0.020 Identities = 90/112 (80%) Strand = Plus / Plus Query: 248 agtcttcaaagaagcgcttgatctcttggaggcggtggggagacagctcactgatgtcgt 307 |||||||||||||||| ||||||||| |||||||| || | | || ||||||| Sbjct: 147175 agtcttcaaagaagcggcggatctcttgaaggcggtgaggggggatttccttgatgtccc 147234 Query: 308 tgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcatc 359 || |||| ||||||||||| ||||| || || || ||||| ||||||||||| Sbjct: 147235 tgaagtggcggtattcagggtcatcagcacaaacagctatgatcttgtcatc 147286 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 216 gacagcgacctccttgttctcattcttcttgt 247 |||||| || || ||||||||||||||||||| Sbjct: 147036 gacagcaacttctttgttctcattcttcttgt 147067
>ref|NM_099987.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT1G01050 mRNA, complete cds Length = 960 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 656 tccttgttctcgtttttcttgtagtcttcgaagaa 622
>ref|XM_960548.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial mRNA Length = 5037 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaag 258 ||||||| |||||||||| ||| ||||||||||| | |||||| Sbjct: 3270 gacagcggcctccttgttgtcaatcttcttgtagacctcaaag 3228
>ref|XM_331708.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial mRNA Length = 5037 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Minus Query: 216 gacagcgacctccttgttctcattcttcttgtagtcttcaaag 258 ||||||| |||||||||| ||| ||||||||||| | |||||| Sbjct: 3270 gacagcggcctccttgttgtcaatcttcttgtagacctcaaag 3228
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 46.1 bits (23), Expect = 0.078 Identities = 53/63 (84%) Strand = Plus / Plus Query: 299 tgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatcttgtcat 358 ||||||| |||| || ||| ||||||| ||||| || || |||||||| |||||||||| Sbjct: 83111 tgatgtctgtgtaatggcggaattcagggtcatcagcacaaactgctatgatcttgtcat 83170 Query: 359 ccc 361 ||| Sbjct: 83171 ccc 83173
>gb|AY081555.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050) mRNA, complete cds Length = 805 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 536 tccttgttctcgtttttcttgtagtcttcgaagaa 502
>gb|AY065201.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050; T25K16.5) mRNA, complete cds Length = 904 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 626 tccttgttctcgtttttcttgtagtcttcgaagaa 592
>gb|AY057668.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 917 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 625 tccttgttctcgtttttcttgtagtcttcgaagaa 591
>gb|AY052717.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 921 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 622 tccttgttctcgtttttcttgtagtcttcgaagaa 588
>emb|BX825830.1|CNS0A4YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 993 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || ||||| |||||||||||||| Sbjct: 695 tccttgttctcgtttttcttatagtcttcaaagaa 661 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 292 agctcactgatgtcgttgtagtgacggtattcaggatcatccgcgcagactgctattatc 351 |||||||||||||||||||| || || || || ||||| || ||||| || || || ||| Sbjct: 629 agctcactgatgtcgttgtaatggcgatactctggatcgtcagcgcaaacagcaatgatc 570 Query: 352 ttgtc 356 ||||| Sbjct: 569 ttgtc 565
>emb|BX825677.1|CNS0A52G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || ||||| |||||||||||||| Sbjct: 676 tccttgttctcgtttttcttatagtcttcaaagaa 642
>gb|AY085015.1| Arabidopsis thaliana clone 124537 mRNA, complete sequence Length = 953 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 656 tccttgttctcgtttttcttgtagtcttcgaagaa 622
>gb|BT001144.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 639 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgtagtcttcaaagaa 260 ||||||||||| || |||||||||||||| ||||| Sbjct: 536 tccttgttctcgtttttcttgtagtcttcgaagaa 502
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 tccttgttctcattcttcttgt 247 |||||||||||||||||||||| Sbjct: 50139 tccttgttctcattcttcttgt 50118
>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 Length = 72872 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 tccttgttctcattcttcttgt 247 |||||||||||||||||||||| Sbjct: 53438 tccttgttctcattcttcttgt 53459
>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence Length = 213826 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 cctccttgttctcattcttct 244 ||||||||||||||||||||| Sbjct: 151086 cctccttgttctcattcttct 151066
>gb|AC009286.32| Homo sapiens chromosome 22 clone 322f3 map 22, complete sequence Length = 121871 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ttatttataacacacatagtc 65 ||||||||||||||||||||| Sbjct: 25999 ttatttataacacacatagtc 26019
>gb|AC158320.1| Homo sapiens chromosome 22 clone WI2-913E19, complete sequence Length = 38653 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ttatttataacacacatagtc 65 ||||||||||||||||||||| Sbjct: 23097 ttatttataacacacatagtc 23117
>gb|AC165299.13| Mus musculus chromosome 15, clone RP23-266F2, complete sequence Length = 186266 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ttatttataacacacatagt 64 |||||||||||||||||||| Sbjct: 85272 ttatttataacacacatagt 85253
>ref|XM_656974.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4462.2), mRNA Length = 3591 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cttcttgtagtcttcaaaga 259 |||||||||||||||||||| Sbjct: 3111 cttcttgtagtcttcaaaga 3092
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgt 247 |||||||||||||||||||| Sbjct: 138020 cttgttctcattcttcttgt 138001
>gb|AC126547.4| Mus musculus BAC clone RP24-180F1 from chromosome 13, complete sequence Length = 181823 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tggggagacagctcactgat 302 |||||||||||||||||||| Sbjct: 108091 tggggagacagctcactgat 108072
>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence Length = 215910 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgt 247 |||||||||||||||||||| Sbjct: 176509 cttgttctcattcttcttgt 176490
>gb|AC122909.2| Mus musculus BAC clone RP23-53K17 from 10, complete sequence Length = 198537 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttgttctcattcttcttgt 247 |||||||||||||||||||| Sbjct: 124496 cttgttctcattcttcttgt 124477
>emb|AL512290.11| Human DNA sequence from clone RP13-143G15 on chromosome 6 Contains a cytochrome c oxidase subunit Vb (COX5B) pseudogene, a novel gene and part of a novel gene, complete sequence Length = 133918 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 agtgtgagtacacattgttg 39 |||||||||||||||||||| Sbjct: 123044 agtgtgagtacacattgttg 123063
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 gcgacctccttgttctcattcttcttgt 247 |||||||| ||||| ||||||||||||| Sbjct: 44967 gcgacctctttgttttcattcttcttgt 44994
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 gcgacctccttgttctcattcttcttgt 247 |||||||| ||||| ||||||||||||| Sbjct: 13352590 gcgacctctttgttttcattcttcttgt 13352617
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 gcgacctccttgttctcattcttcttgt 247 |||||||| ||||| ||||||||||||| Sbjct: 13359930 gcgacctctttgttttcattcttcttgt 13359957
>gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, complete sequence Length = 169201 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttgttctcattcttcttgt 247 |||||||||||||||||||| Sbjct: 132807 cttgttctcattcttcttgt 132826
>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence Length = 205357 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttgttctcattcttcttgt 247 |||||||||||||||||||| Sbjct: 186927 cttgttctcattcttcttgt 186946
>emb|AL669911.16| Mouse DNA sequence from clone RP23-65G8 on chromosome 11, complete sequence Length = 205030 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tttatttataacacacatag 63 |||||||||||||||||||| Sbjct: 63857 tttatttataacacacatag 63838 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,914,564 Number of Sequences: 3902068 Number of extensions: 2914564 Number of successful extensions: 54496 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54079 Number of HSP's gapped (non-prelim): 407 length of query: 361 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 339 effective length of database: 17,147,199,772 effective search space: 5812900722708 effective search space used: 5812900722708 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)