| Clone Name | baal41p18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 593 bits (299), Expect = e-166 Identities = 570/659 (86%), Gaps = 1/659 (0%) Strand = Plus / Minus Query: 11 ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 70 |||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 43027 ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 42969 Query: 71 cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 130 |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 42968 tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 42909 Query: 131 tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 190 | | || || |||||||| || || |||||||||||||||||||||| || || ||||| Sbjct: 42908 tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 42849 Query: 191 ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 250 |||||||||| | || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 42848 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 42789 Query: 251 catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 310 | | ||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 42788 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 42729 Query: 311 ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 370 |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || || Sbjct: 42728 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 42669 Query: 371 aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 430 ||||||||||||||| |||||||| || ||||| ||| ||||| || ||||| ||||| Sbjct: 42668 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 42609 Query: 431 cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 490 ||||||||| ||||||||||||||||| || || || || || || |||||||||||||| Sbjct: 42608 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 42549 Query: 491 ggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgaccg 550 |||||||||||||||| | | |||| |||| |||| |||||| | || ||||| || || Sbjct: 42548 ggtgatggaaggtgacttcggcgctgttggtggagcggctgctgcagttgaccctgatcg 42489 Query: 551 ccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaattt 610 ||||| || || |||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 42488 tcccacctcgtcgcttgctgtgcacatagcatggatcatggatgtcttgcacaagaattt 42429 Query: 611 ggatacaaaatctaagatttaccgagatccatcactagcttgcatcttcttgatgaaca 669 |||| ||| || ||||| ||||||||||||||||| |||||| ||||||||||||||| Sbjct: 42428 agatataaagtcgaagatataccgagatccatcactcgcttgcgtcttcttgatgaaca 42370
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 593 bits (299), Expect = e-166 Identities = 570/659 (86%), Gaps = 1/659 (0%) Strand = Plus / Minus Query: 11 ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 70 |||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 23111252 ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 23111194 Query: 71 cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 130 |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 23111193 tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 23111134 Query: 131 tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 190 | | || || |||||||| || || |||||||||||||||||||||| || || ||||| Sbjct: 23111133 tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 23111074 Query: 191 ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 250 |||||||||| | || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 23111073 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 23111014 Query: 251 catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 310 | | ||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 23111013 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 23110954 Query: 311 ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 370 |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || || Sbjct: 23110953 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 23110894 Query: 371 aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 430 ||||||||||||||| |||||||| || ||||| ||| ||||| || ||||| ||||| Sbjct: 23110893 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 23110834 Query: 431 cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 490 ||||||||| ||||||||||||||||| || || || || || || |||||||||||||| Sbjct: 23110833 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 23110774 Query: 491 ggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgaccg 550 |||||||||||||||| | | |||| |||| |||| |||||| | || ||||| || || Sbjct: 23110773 ggtgatggaaggtgacttcggcgctgttggtggagcggctgctgcagttgaccctgatcg 23110714 Query: 551 ccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaattt 610 ||||| || || |||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 23110713 tcccacctcgtcgcttgctgtgcacatagcatggatcatggatgtcttgcacaagaattt 23110654 Query: 611 ggatacaaaatctaagatttaccgagatccatcactagcttgcatcttcttgatgaaca 669 |||| ||| || ||||| ||||||||||||||||| |||||| ||||||||||||||| Sbjct: 23110653 agatataaagtcgaagatataccgagatccatcactcgcttgcgtcttcttgatgaaca 23110595
>dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054N12, full insert sequence Length = 2314 Score = 593 bits (299), Expect = e-166 Identities = 570/659 (86%), Gaps = 1/659 (0%) Strand = Plus / Plus Query: 11 ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 70 |||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 865 ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 923 Query: 71 cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 130 |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 924 tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 983 Query: 131 tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 190 | | || || |||||||| || || |||||||||||||||||||||| || || ||||| Sbjct: 984 tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 1043 Query: 191 ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 250 |||||||||| | || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1044 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 1103 Query: 251 catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 310 | | ||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 1104 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 1163 Query: 311 ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 370 |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || || Sbjct: 1164 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 1223 Query: 371 aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 430 ||||||||||||||| |||||||| || ||||| ||| ||||| || ||||| ||||| Sbjct: 1224 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 1283 Query: 431 cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 490 ||||||||| ||||||||||||||||| || || || || || || |||||||||||||| Sbjct: 1284 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 1343 Query: 491 ggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgaccg 550 |||||||||||||||| | | |||| |||| |||| |||||| | || ||||| || || Sbjct: 1344 ggtgatggaaggtgacttcggcgctgttggtggagcggctgctgcagttgaccctgatcg 1403 Query: 551 ccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaattt 610 ||||| || || |||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 1404 tcccacctcgtcgcttgctgtgcacatagcatggatcatggatgtcttgcacaagaattt 1463 Query: 611 ggatacaaaatctaagatttaccgagatccatcactagcttgcatcttcttgatgaaca 669 |||| ||| || ||||| ||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1464 agatataaagtcgaagatataccgagatccatcactcgcttgcgtcttcttgatgaaca 1522
>dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E02, full insert sequence Length = 1302 Score = 476 bits (240), Expect = e-131 Identities = 483/564 (85%) Strand = Plus / Plus Query: 106 tcgcccccttcggcgacctcgcctttatagctgctgtgcgcactcaggcactgcagctca 165 |||||||||| || ||||| |||||| | || || |||||||| || || ||||||||| Sbjct: 1 tcgccccctttggggaccttgcctttgtcgccgccgtgcgcacacaagccttgcagctca 60 Query: 166 tatcattcggcgacgccatttcttcctccagccgctcgcctgagcgcctcttccgagttg 225 ||||||||||||| || || ||||||||||||||| | || ||||||||||||||||| | Sbjct: 61 tatcattcggcgatgctatctcttcctccagccgcgctccggagcgcctcttccgagtgg 120 Query: 226 tggacatgtatgaggctgtgcgggacatcctcccggaccttgaccctgtgttctccgacc 285 |||||||||| ||||||||||||||| | ||||| |||||||| ||||||||| |||||| Sbjct: 121 tggacatgtacgaggctgtgcgggaccttctccctgaccttgatcctgtgttcgccgacc 180 Query: 286 cttactctgctgcactccgtgcagaggtctctgccgtgcgcaacaccctcggttcctcaa 345 | ||||||||||| ||||||||||||||| | || ||| ||||||||||||| || || | Sbjct: 181 cgtactctgctgcgctccgtgcagaggtcacggcggtgtgcaacaccctcggctcatcga 240 Query: 346 tcaaaggtatattcatggaattggaaaatctcatccgccgagatcctgcccgggttgcca 405 ||||||| ||||||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 241 tcaaaggcatattcatggagttagaaaatctcatccgccgtgatcctgctcgagttgcag 300 Query: 406 cccctggtggtggtatacaccccatcactcggtacgtcatgaactatctccgagccgcat 465 ||| ||||| || ||||| |||||||||||||| ||||||||||||||||| || || | Sbjct: 301 cccaaggtggaggcatacatcccatcactcggtatgtcatgaactatctccgtgctgctt 360 Query: 466 gcggttcacgacagacattggaagaggtgatggaaggtgaccttagtgctggtggtagag 525 | || || || |||||||||||||||||||||||||||||| | | |||| |||| ||| Sbjct: 361 gtgggtcgcggcagacattggaagaggtgatggaaggtgacttcggcgctgttggtggag 420 Query: 526 ctgctgcttccgtggaccccgaccgccccacgtcttcacttgctgtgcacatcgcatgga 585 | |||||| | || ||||| || || ||||| || || |||||||||||||| ||||||| Sbjct: 421 cggctgctgcagttgaccctgatcgtcccacctcgtcgcttgctgtgcacatagcatgga 480 Query: 586 tcatggatgttcttcacaagaatttggatacaaaatctaagatttaccgagatccatcac 645 |||||||||| | ||||||||||| |||| ||| || ||||| |||||||||||||||| Sbjct: 481 tcatggatgtcttgcacaagaatttagatataaagtcgaagatataccgagatccatcac 540 Query: 646 tagcttgcatcttcttgatgaaca 669 | |||||| ||||||||||||||| Sbjct: 541 tcgcttgcgtcttcttgatgaaca 564
>ref|NM_190417.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1959 Score = 402 bits (203), Expect = e-109 Identities = 516/619 (83%), Gaps = 1/619 (0%) Strand = Plus / Plus Query: 10 gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 69 ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 858 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 916 Query: 70 gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 129 ||||||||||||| |||||||| ||||| ||||| |||||||| | ||||||||||| | Sbjct: 917 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 976 Query: 130 ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 189 || | ||||| || || || |||| |||||||| || || ||||||||||| ||||| Sbjct: 977 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 1036 Query: 190 cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 249 | | || || | || |||||||||||||| || | |||||||||||||| ||||| | Sbjct: 1037 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 1096 Query: 250 acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 309 || |||| || ||||| |||||||| || | || || |||||||||||||| ||||| | Sbjct: 1097 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 1156 Query: 310 aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 369 |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1157 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 1216 Query: 370 aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 429 ||||||||||||| || ||||||||||| ||| | ||||||||||| |||||||| | Sbjct: 1217 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 1276 Query: 430 tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 489 |||| ||||| || |||||||||||||| || || || || ||| |||||||| |||||| Sbjct: 1277 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 1336 Query: 490 aggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgacc 549 ||||||||||||||||| | |||||| ||| | || ||| | | || || ||||| | Sbjct: 1337 aggtgatggaaggtgacttaggtgctgttggcggggcagctattgctgttgatcccgatc 1396 Query: 550 gccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaatt 609 ||||||| || |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1397 gccccacttcgtcacttgcagtgcacattgcatggatcatggatgtgcttcacaagaatt 1456 Query: 610 tggatacaaaatctaagat 628 |||| || ||||||||||| Sbjct: 1457 tggagaccaaatctaagat 1475
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 402 bits (203), Expect = e-109 Identities = 516/619 (83%), Gaps = 1/619 (0%) Strand = Plus / Plus Query: 10 gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 69 ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 35403604 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 35403662 Query: 70 gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 129 ||||||||||||| |||||||| ||||| ||||| |||||||| | ||||||||||| | Sbjct: 35403663 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 35403722 Query: 130 ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 189 || | ||||| || || || |||| |||||||| || || ||||||||||| ||||| Sbjct: 35403723 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 35403782 Query: 190 cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 249 | | || || | || |||||||||||||| || | |||||||||||||| ||||| | Sbjct: 35403783 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 35403842 Query: 250 acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 309 || |||| || ||||| |||||||| || | || || |||||||||||||| ||||| | Sbjct: 35403843 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 35403902 Query: 310 aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 369 |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 35403903 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 35403962 Query: 370 aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 429 ||||||||||||| || ||||||||||| ||| | ||||||||||| |||||||| | Sbjct: 35403963 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 35404022 Query: 430 tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 489 |||| ||||| || |||||||||||||| || || || || ||| |||||||| |||||| Sbjct: 35404023 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 35404082 Query: 490 aggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgacc 549 ||||||||||||||||| | |||||| ||| | || ||| | | || || ||||| | Sbjct: 35404083 aggtgatggaaggtgacttaggtgctgttggcggggcagctattgctgttgatcccgatc 35404142 Query: 550 gccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaatt 609 ||||||| || |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 35404143 gccccacttcgtcacttgcagtgcacattgcatggatcatggatgtgcttcacaagaatt 35404202 Query: 610 tggatacaaaatctaagat 628 |||| || ||||||||||| Sbjct: 35404203 tggagaccaaatctaagat 35404221
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 402 bits (203), Expect = e-109 Identities = 516/619 (83%), Gaps = 1/619 (0%) Strand = Plus / Plus Query: 10 gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 69 ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 27553 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 27611 Query: 70 gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 129 ||||||||||||| |||||||| ||||| ||||| |||||||| | ||||||||||| | Sbjct: 27612 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 27671 Query: 130 ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 189 || | ||||| || || || |||| |||||||| || || ||||||||||| ||||| Sbjct: 27672 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 27731 Query: 190 cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 249 | | || || | || |||||||||||||| || | |||||||||||||| ||||| | Sbjct: 27732 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 27791 Query: 250 acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 309 || |||| || ||||| |||||||| || | || || |||||||||||||| ||||| | Sbjct: 27792 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 27851 Query: 310 aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 369 |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 27852 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 27911 Query: 370 aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 429 ||||||||||||| || ||||||||||| ||| | ||||||||||| |||||||| | Sbjct: 27912 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 27971 Query: 430 tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 489 |||| ||||| || |||||||||||||| || || || || ||| |||||||| |||||| Sbjct: 27972 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 28031 Query: 490 aggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgacc 549 ||||||||||||||||| | |||||| ||| | || ||| | | || || ||||| | Sbjct: 28032 aggtgatggaaggtgacttaggtgctgttggcggggcagctattgctgttgatcccgatc 28091 Query: 550 gccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaatt 609 ||||||| || |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 28092 gccccacttcgtcacttgcagtgcacattgcatggatcatggatgtgcttcacaagaatt 28151 Query: 610 tggatacaaaatctaagat 628 |||| || ||||||||||| Sbjct: 28152 tggagaccaaatctaagat 28170
>dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133L14, full insert sequence Length = 2390 Score = 402 bits (203), Expect = e-109 Identities = 516/619 (83%), Gaps = 1/619 (0%) Strand = Plus / Plus Query: 10 gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 69 ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 1056 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 1114 Query: 70 gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 129 ||||||||||||| |||||||| ||||| ||||| |||||||| | ||||||||||| | Sbjct: 1115 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 1174 Query: 130 ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 189 || | ||||| || || || |||| |||||||| || || ||||||||||| ||||| Sbjct: 1175 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 1234 Query: 190 cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 249 | | || || | || |||||||||||||| || | |||||||||||||| ||||| | Sbjct: 1235 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 1294 Query: 250 acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 309 || |||| || ||||| |||||||| || | || || |||||||||||||| ||||| | Sbjct: 1295 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 1354 Query: 310 aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 369 |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1355 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 1414 Query: 370 aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 429 ||||||||||||| || ||||||||||| ||| | ||||||||||| |||||||| | Sbjct: 1415 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 1474 Query: 430 tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 489 |||| ||||| || |||||||||||||| || || || || ||| |||||||| |||||| Sbjct: 1475 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 1534 Query: 490 aggtgatggaaggtgaccttagtgctggtggtagagctgctgcttccgtggaccccgacc 549 ||||||||||||||||| | |||||| ||| | || ||| | | || || ||||| | Sbjct: 1535 aggtgatggaaggtgacttaggtgctgttggcggggcagctattgctgttgatcccgatc 1594 Query: 550 gccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaagaatt 609 ||||||| || |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1595 gccccacttcgtcacttgcagtgcacattgcatggatcatggatgtgcttcacaagaatt 1654 Query: 610 tggatacaaaatctaagat 628 |||| || ||||||||||| Sbjct: 1655 tggagaccaaatctaagat 1673
>gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence Length = 1245 Score = 216 bits (109), Expect = 7e-53 Identities = 268/321 (83%) Strand = Plus / Plus Query: 186 tcttcctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtg 245 |||||||| |||||| |||| |||||||| ||||| || || |||||||| ||||||||| Sbjct: 15 tcttcctcaagccgcgcgccggagcgccttttccgcgtcgttgacatgtacgaggctgtg 74 Query: 246 cgggacatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgt 305 || ||||||||||| |||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 75 cgtgacatcctccctgaccttgatcctgtgttctctgacccatactccgctgcactccgt 134 Query: 306 gcagaggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaa 365 || |||||||| | || ||||||| || || | ||||| |||||||| |||||| Sbjct: 135 gcggaggtctcctcgatgtgcaacacactggggtggggtatcaagggtatatttatggaa 194 Query: 366 ttggaaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacac 425 |||||||||||||||||||| || |||||||| |||| ||| || || | ||||| Sbjct: 195 ttggaaaatctcatccgccgtgaccctgcccgaattgctgcccaagggggcgtcatacat 254 Query: 426 cccatcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattg 485 || ||||||||| | || ||||||||||||||||| || || || || || ||||||||| Sbjct: 255 cctatcactcgggatgttatgaactatctccgagctgcgtgtggatcgcggcagacattg 314 Query: 486 gaagaggtgatggaaggtgac 506 ||||||||||||||||||||| Sbjct: 315 gaagaggtgatggaaggtgac 335 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 546 gaccgccccacgtcttcacttgctgtgcacatcgcatggatcatggatgttcttcacaag 605 ||||| ||||| || || |||||||||||||| || |||||||||||||||||||| ||| Sbjct: 375 gaccgtcccacatcatcccttgctgtgcacattgcttggatcatggatgttcttcaaaag 434 Query: 606 aatttggatacaaaatctaagatttaccgagatccatcactagcttgcatcttcttgatg 665 ||| |||||| || |||||||| ||||| |||||||| || |||| |||||| ||||| Sbjct: 435 aatctggatatgaagtctaagatataccgggatccatctcttgcttctatcttcctgatg 494 Query: 666 aa 667 || Sbjct: 495 aa 496
>ref|XM_959480.1| Neurospora crassa OR74A hypothetical protein (NCU03167.1) partial mRNA Length = 402 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 gctgtgcgcactcaggcactgc 159 |||||||||||||||||||||| Sbjct: 221 gctgtgcgcactcaggcactgc 242
>ref|XM_330602.1| Neurospora crassa OR74A hypothetical protein (NCU03167.1) partial mRNA Length = 402 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 gctgtgcgcactcaggcactgc 159 |||||||||||||||||||||| Sbjct: 221 gctgtgcgcactcaggcactgc 242
>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete sequence Length = 196132 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 512 tgctggtggtagagctgctgct 533 |||||||||||||||||||||| Sbjct: 148043 tgctggtggtagagctgctgct 148064 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tagtgctggtggtagagctgctgct 533 ||||| ||||||||||||||||||| Sbjct: 148367 tagtggtggtggtagagctgctgct 148391 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tagtgctggtggtagagctgctgct 533 ||||| ||||||||||||||||||| Sbjct: 148295 tagtggtggtggtagagctgctgct 148319 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tagtgctggtggtagagctgctgct 533 ||||| ||||||||||||||||||| Sbjct: 148247 tagtggtggtggtagagctgctgct 148271 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tagtgctggtggtagagctgctgct 533 ||||| ||||||||||||||||||| Sbjct: 148202 tagtggtggtggtagagctgctgct 148226 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tagtgctggtggtagagctgctgct 533 ||||| ||||||||||||||||||| Sbjct: 148085 tagtggtggtggtagagctgctgct 148109
>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14 Length = 68050 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gctgtgcgcactcaggcactgc 159 |||||||||||||||||||||| Sbjct: 62386 gctgtgcgcactcaggcactgc 62365
>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence Length = 162721 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 acatgtatgaggctgtgcgggacat 253 ||||||||||| ||||||||||||| Sbjct: 45495 acatgtatgagcctgtgcgggacat 45519
>gb|BC015276.1| Mus musculus inter-alpha trypsin inhibitor, heavy chain 3, mRNA (cDNA clone MGC:18839 IMAGE:4212290), complete cds Length = 2807 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 1065 gatcatggatgttcttcacaa 1045
>gb|AY049011.1| Mus musculus melanin-concentrating hormone receptor 1 gene, complete cds, alternatively spliced Length = 5027 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 acatgtatgaggctgtgcgggacat 253 ||||||||||| ||||||||||||| Sbjct: 163 acatgtatgagcctgtgcgggacat 187
>gb|AY293839.1| Canavalia bonariensis small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 633 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 ggaccttgaccctgtgttctc 280 ||||||||||||||||||||| Sbjct: 588 ggaccttgaccctgtgttctc 608
>dbj|AK146700.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920043J08 product:inter-alpha trypsin inhibitor, heavy chain 3, full insert sequence Length = 3304 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 1108 gatcatggatgttcttcacaa 1088
>gb|AC011942.6|AC011942 Homo sapiens, clone RP11-16I13, complete sequence Length = 122538 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 tttggatacaaaatctaagat 628 ||||||||||||||||||||| Sbjct: 44329 tttggatacaaaatctaagat 44349
>ref|NM_008407.1| Mus musculus inter-alpha trypsin inhibitor, heavy chain 3 (Itih3), mRNA Length = 2775 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 1064 gatcatggatgttcttcacaa 1044
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 29092 gatcatggatgttcttcacaa 29112
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 71093 gatcatggatgttcttcacaa 71073
>emb|X70393.1|MMIAIH3 M.musculus mRNA for inter-alpha-inhibitor H3 chain Length = 2775 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 gatcatggatgttcttcacaa 604 ||||||||||||||||||||| Sbjct: 1064 gatcatggatgttcttcacaa 1044
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 gaccgcgtcttcgacggtctcgcc 110 ||||||||||||| |||||||||| Sbjct: 1859978 gaccgcgtcttcgccggtctcgcc 1859955
>gb|BC104459.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2, transcript variant 2, mRNA (cDNA clone MGC:129931 IMAGE:40030657), complete cds Length = 865 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 323 ggtggtagagctgctgcttc 304
>gb|BC104458.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2, transcript variant 2, mRNA (cDNA clone MGC:129930 IMAGE:40030655), complete cds Length = 865 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 323 ggtggtagagctgctgcttc 304
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ttggaagaggtgatggaagg 502 |||||||||||||||||||| Sbjct: 114906 ttggaagaggtgatggaagg 114887
>ref|NM_199456.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2 (TEPP), transcript variant 2, mRNA Length = 875 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 332 ggtggtagagctgctgcttc 313
>ref|NM_199046.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2 (TEPP), transcript variant 1, mRNA Length = 956 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 332 ggtggtagagctgctgcttc 313
>gb|AY216323.1| Inula britannica tRNA-Ala (trnA) gene, partial sequence; chloroplast Length = 619 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ttctccgacccttactctgc 295 |||||||||||||||||||| Sbjct: 131 ttctccgacccttactctgc 112
>gb|AY363223.1| Homo sapiens testis/prostate/placenta-expressed protein splice variant mRNA, complete cds, alternatively spliced Length = 956 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 332 ggtggtagagctgctgcttc 313
>gb|AY363222.1| Homo sapiens testis/prostate/placenta-expressed protein mRNA, complete cds, alternatively spliced Length = 875 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 332 ggtggtagagctgctgcttc 313
>gb|AC149585.7| Mus musculus BAC clone RP24-316M20 from chromosome y, complete sequence Length = 172093 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tcatggaattggaaaatctcatcc 381 |||||||||| ||||||||||||| Sbjct: 20389 tcatggaattagaaaatctcatcc 20412
>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a novel pseudogene, part of the KCNQ5 gene for potassium voltage-gated channel KQT-like subfamily member 5, and a phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene, complete sequence Length = 154998 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 atgtatgaggctgtgcggga 250 |||||||||||||||||||| Sbjct: 89470 atgtatgaggctgtgcggga 89451
>emb|X71659.1|RSBLNBAA R.sphaeroides genes glnA and glnB Length = 2460 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 gaccgcgtcttcgacggtctcgcc 110 ||||||||||||| |||||||||| Sbjct: 904 gaccgcgtcttcgccggtctcgcc 881
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcgaccgcgtcttcgacggtctcg 108 ||||||||||| |||||||||||| Sbjct: 1528725 gcgaccgcgtcgtcgacggtctcg 1528748
>gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, complete sequence Length = 188926 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 53155 ggtggtagagctgctgcttc 53136
>gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306, section 432 of 469 of the complete genome Length = 14572 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ttgccacccctggtggtggt 419 |||||||||||||||||||| Sbjct: 13529 ttgccacccctggtggtggt 13548
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tcatggaattggaaaatctcatcc 381 |||||||||| ||||||||||||| Sbjct: 105885 tcatggaattagaaaatctcatcc 105908
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ggttcgacatcgcccgctgg 28 |||||||||||||||||||| Sbjct: 517132 ggttcgacatcgcccgctgg 517151
>gb|AC010543.9| Homo sapiens chromosome 16 clone RP11-440K14, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 140814 ggtggtagagctgctgcttc 140795
>tpg|BK001513.1| TPA: TPA_exp: Sus scrofa Tepp (Tepp) mRNA, complete cds Length = 770 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggtggtagagctgctgcttc 535 |||||||||||||||||||| Sbjct: 198 ggtggtagagctgctgcttc 179
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 gatcatggatgttcttcaca 603 |||||||||||||||||||| Sbjct: 3484036 gatcatggatgttcttcaca 3484055
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 gatcatggatgttcttcaca 603 |||||||||||||||||||| Sbjct: 28831 gatcatggatgttcttcaca 28850
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 gatcatggatgttcttcaca 603 |||||||||||||||||||| Sbjct: 96859 gatcatggatgttcttcaca 96878
>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence Length = 150231 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tcatggaattggaaaatctcatcc 381 |||||||||| ||||||||||||| Sbjct: 90470 tcatggaattagaaaatctcatcc 90493
>gb|AF032116.1|AF032116 Rhodobacter sphaeroides PII protein (glnB) gene, complete cds Length = 907 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 gaccgcgtcttcgacggtctcgcc 110 ||||||||||||| |||||||||| Sbjct: 904 gaccgcgtcttcgccggtctcgcc 881
>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence Length = 189288 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcccagccttcaacatggtcttcc 54 ||||||||||||||||||| |||| Sbjct: 122743 tcccagccttcaacatggtgttcc 122720 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,517,084 Number of Sequences: 3902068 Number of extensions: 4517084 Number of successful extensions: 87706 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87327 Number of HSP's gapped (non-prelim): 372 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)