ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41n01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479460.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 21 tcgagccgctggacgcgcgcatcaaggagctgacctcgtcgcagggagagctgctggcca 80 |||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||| || Sbjct: 68 tcgagcagttggacgcgcgcatcaaggagctgacctcgtcgcagggggagttgctggaca 127 Query: 81 ggatccagaagctcaaac 98 |||||||||||||||||| Sbjct: 128 ggatccagaagctcaaac 145 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 203 ggaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagac 247 |||||||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 147 ggaggtgcagaactggcgctccaacctcgagacacaggtcaagac 191
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 45 aggagctgacctcgtcgcagggagagctgctggccaggatccagaagctcaaacaggtat 104 |||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||| Sbjct: 28318542 aggagctgacctcgtcgcagggggagttgctggacaggatccagaagctcaaactggtat 28318601 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 201 caggaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagacctgccacaacgtg 260 |||||||||||||| ||||||||||| ||||| | ||||||||||| |||| || ||| Sbjct: 28318724 caggaggtgcagaactggcgctccaacctcgagacacaggtcaagacaagccagaatgtg 28318783 Query: 261 agta 264 |||| Sbjct: 28318784 agta 28318787 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaac 363 |||||||||||||||||||||| Sbjct: 11108628 gtttatagaaaaatatatcaac 11108607 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 23390223 tttatagaaaaatatatcaa 23390204 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 ||||||||||||||||| |||||| Sbjct: 5971671 gtttatagaaaaatatagcaacgt 5971694 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 1945535 gtttatagaaaaatatatca 1945554
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 45 aggagctgacctcgtcgcagggagagctgctggccaggatccagaagctcaaacaggtat 104 |||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||| Sbjct: 44105 aggagctgacctcgtcgcagggggagttgctggacaggatccagaagctcaaactggtat 44164 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 201 caggaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagacctgccacaacgtg 260 |||||||||||||| ||||||||||| ||||| | ||||||||||| |||| || ||| Sbjct: 44287 caggaggtgcagaactggcgctccaacctcgagacacaggtcaagacaagccagaatgtg 44346 Query: 261 agta 264 |||| Sbjct: 44347 agta 44350
>gb|AY105575.1| Zea mays PCO097845 mRNA sequence Length = 506 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 21 tcgagccgctggacgcgcgcatcaaggagctgacctcgtcgcagggagagctgctggcca 80 |||||| ||| |||| ||| |||||||||||||||||||||||| ||| |||||| | Sbjct: 170 tcgagcagctagacgggcgagtcaaggagctgacctcgtcgcaggcggagttgctggaga 229 Query: 81 ggatccagaagctcaaaca 99 ||||||||||||| ||||| Sbjct: 230 ggatccagaagctgaaaca 248 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 204 gaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagac 247 ||||||||||| |||||||||||||| ||| ||||||||||||| Sbjct: 250 gaggtgcagaactggcgctccaatgtagagacgcaggtcaagac 293
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 327 taaaattttggccaggtttatagaaaaatatatcaac 363 |||||||||| || ||||||||||||||||||||||| Sbjct: 55889 taaaattttgaccgggtttatagaaaaatatatcaac 55853
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 327 taaaattttggccaggtttatagaaaaatatatcaac 363 |||||||||| || ||||||||||||||||||||||| Sbjct: 20137805 taaaattttgaccgggtttatagaaaaatatatcaac 20137769 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatatatcaacgtttacgatacaaaa 378 |||||||| ||||||||||||||||| |||| ||| | |||||||| Sbjct: 34104560 tttggccaagtttatagaaaaatataacaacattttcaatacaaaa 34104605 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 325 tttaaaattttggccaggtttatagaaaaatatatcaac 363 ||||||| |||| ||| ||||||||||||||||| |||| Sbjct: 8297539 tttaaaagtttgaccaagtttatagaaaaatataacaac 8297501 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||||||||||||| ||||||| Sbjct: 15571341 tttggccaggtttatagagaaatata 15571366 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaa 378 ||||||||||||||||| ||| ||| |||||||||| Sbjct: 17386848 gtttatagaaaaatataacaatatttccgatacaaaa 17386884 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 agcttgtggaggtgaaggag 506 |||||||||||||||||||| Sbjct: 35974528 agcttgtggaggtgaaggag 35974547 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 324 ttttaaaattttggccaggtttatagaaaaatatat 359 |||||||| |||| || |||||||||||||||||| Sbjct: 16581564 ttttaaaagtttgatcaagtttatagaaaaatatat 16581599
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 327 taaaattttggccaggtttatagaaaaatatatcaac 363 |||||||||| || ||||||||||||||||||||||| Sbjct: 20130832 taaaattttgaccgggtttatagaaaaatatatcaac 20130796 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatatatcaacgtttacgatacaaaa 378 |||||||| ||||||||||||||||| |||| ||| | |||||||| Sbjct: 34195032 tttggccaagtttatagaaaaatataacaacattttcaatacaaaa 34195077 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 325 tttaaaattttggccaggtttatagaaaaatatatcaac 363 ||||||| |||| ||| ||||||||||||||||| |||| Sbjct: 8295374 tttaaaagtttgaccaagtttatagaaaaatataacaac 8295336 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||||||||||||| ||||||| Sbjct: 15565875 tttggccaggtttatagagaaatata 15565900 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaa 378 ||||||||||||||||| ||| ||| |||||||||| Sbjct: 17380389 gtttatagaaaaatataacaatatttccgatacaaaa 17380425 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 agcttgtggaggtgaaggag 506 |||||||||||||||||||| Sbjct: 36064602 agcttgtggaggtgaaggag 36064621 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 324 ttttaaaattttggccaggtttatagaaaaatatat 359 |||||||| |||| || |||||||||||||||||| Sbjct: 16575197 ttttaaaagtttgatcaagtttatagaaaaatatat 16575232
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatatatcaacgtttacgatacaaaa 378 |||||||| ||||||||||||||||| |||| ||| | |||||||| Sbjct: 68372 tttggccaagtttatagaaaaatataacaacattttcaatacaaaa 68417
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatatatcaa 362 ||||||| ||| ||||||||||||||||||||| Sbjct: 19563746 aattttgaccaagtttatagaaaaatatatcaa 19563714 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||| || |||| ||||| ||||||||| Sbjct: 23164197 gtttatagaaaaatttagcaacatttacaatacaaaat 23164234
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatatatcaa 362 ||||||| ||| ||||||||||||||||||||| Sbjct: 84391 aattttgaccaagtttatagaaaaatatatcaa 84359
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatatatcaa 362 ||||||| ||| ||||||||||||||||||||| Sbjct: 14472 aattttgaccaagtttatagaaaaatatatcaa 14440
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 323 gttttaaaattttggccaggtttatagaaaaatata 358 |||||||||||||| || ||||||||||||||||| Sbjct: 112609 gttttaaaattttgatcaagtttatagaaaaatata 112644
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 323 gttttaaaattttggccaggtttatagaaaaatata 358 |||||||||||||| || ||||||||||||||||| Sbjct: 46396 gttttaaaattttgatcaagtttatagaaaaatata 46431
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 323 gttttaaaattttggccaggtttatagaaaaatata 358 |||||||||||||| || ||||||||||||||||| Sbjct: 10429576 gttttaaaattttgatcaagtttatagaaaaatata 10429611 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 326 ttaaaattttggccaggtttatagaaaaatatatcaacgttta 368 |||||| |||| ||| ||||||||||||||||| |||| |||| Sbjct: 19751431 ttaaaagtttgaccaagtttatagaaaaatatagcaacattta 19751473
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 326 ttaaaattttggccaggtttatagaaaaatatatcaacgttta 368 |||||| |||| ||| ||||||||||||||||| |||| |||| Sbjct: 79505 ttaaaagtttgaccaagtttatagaaaaatatagcaacattta 79547
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 326 ttaaaattttggccaggtttatagaaaaatatatcaacgttta 368 |||||| |||| ||| ||||||||||||||||| |||| |||| Sbjct: 4055 ttaaaagtttgaccaagtttatagaaaaatatagcaacattta 4097
>emb|Y11199.1|SEERYGENE S.erythraea erythromycin gene cluster DNA Length = 8160 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 tgtcgggcgggctcgagccgctg 31 ||||||||||||||||||||||| Sbjct: 6639 tgtcgggcgggctcgagccgctg 6661
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 325 tttaaaattttggccaggtttatagaaaaatatatcaac 363 ||||||| |||| ||| ||||||||||||||||| |||| Sbjct: 34795 tttaaaagtttgaccaagtttatagaaaaatataacaac 34757
>gb|U77459.1|SEU77459 Saccharopolyspora erythraea EryBIV (eryBIV), EryBV (eryBV), EryCVI (eryCVI), EryBVI (eryBVI), EryCIV (eryCIV), EryCV (eryCV) and EryBVII (eryBVII) genes, complete cds and EryAI (eryAI) and EryK (eryK) genes, partial cds Length = 8340 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 tgtcgggcgggctcgagccgctg 31 ||||||||||||||||||||||| Sbjct: 6755 tgtcgggcgggctcgagccgctg 6777
>ref|XM_529529.1| PREDICTED: Pan troglodytes LOC452280 (LOC452280), mRNA Length = 662 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tctggctctctgtgtttccttg 595 |||||||||||||||||||||| Sbjct: 139 tctggctctctgtgtttccttg 118
>ref|NM_001031332.1| Gallus gallus G-2 and S-phase expressed 1 (GTSE1), mRNA Length = 2553 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 tgagaagtttgattttgacctt 181 |||||||||||||||||||||| Sbjct: 153 tgagaagtttgattttgacctt 174
>ref|XM_423598.1| PREDICTED: Gallus gallus similar to B99 (LOC425907), mRNA Length = 1023 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 tgagaagtttgattttgacctt 181 |||||||||||||||||||||| Sbjct: 153 tgagaagtttgattttgacctt 174
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||||||||||||| ||||||| Sbjct: 70892 tttggccaggtttatagagaaatata 70917
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||| || |||| ||||| ||||||||| Sbjct: 54389 gtttatagaaaaatttagcaacatttacaatacaaaat 54426
>emb|AJ719627.1| Gallus gallus mRNA for hypothetical protein, clone 4l2 Length = 2553 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 tgagaagtttgattttgacctt 181 |||||||||||||||||||||| Sbjct: 153 tgagaagtttgattttgacctt 174
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| |||| ||||||||| Sbjct: 28817 gtttatagaaaaatatattaacatttataatacaaaat 28854
>tpg|BK005030.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 27 (WRKY27) gene, complete cds Length = 2308 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| ||| | ||||||||| Sbjct: 1331 gtttatagaaaaatatattaacattttcaatacaaaat 1294
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||| ||||||||||||||||| Sbjct: 26492708 tttggccaagtttatagaaaaatata 26492733 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 7184970 tttatagaaaaatatatcaac 7184990 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 ttttagtttacttcgcatattaggttggtttt 312 |||||| |||| || ||||||||||||||||| Sbjct: 10973709 ttttaggttacatcacatattaggttggtttt 10973740 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 caggtttatagaaaaatata 358 |||||||||||||||||||| Sbjct: 2521246 caggtttatagaaaaatata 2521265
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| |||| ||||||||| Sbjct: 18321953 gtttatagaaaaatatattaacatttataatacaaaat 18321916 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaa 362 ||||||||||||||||||||| Sbjct: 15332413 gtttatagaaaaatatatcaa 15332433
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 580 tctctgtgtttccttgaaacat 601 |||||||||||||||||||||| Sbjct: 16837894 tctctgtgtttccttgaaacat 16837873
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ttaaaattttggccaggtttatagaaaaatatatcaac 363 |||||| || ||||| ||||||||||||||||| |||| Sbjct: 12849467 ttaaaagttcggccaagtttatagaaaaatataacaac 12849430 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 330 aattttggccaggtttatagaaaaatata 358 ||||||| ||| ||||||||||||||||| Sbjct: 27341935 aattttgaccaagtttatagaaaaatata 27341963 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatata 358 ||||||| ||| ||||||||||||||||| Sbjct: 8797209 aattttgaccatgtttatagaaaaatata 8797181 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 tttggccaggtttatagaaaa 353 ||||||||||||||||||||| Sbjct: 5012578 tttggccaggtttatagaaaa 5012558 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gttttaaaattttggccagg 342 |||||||||||||||||||| Sbjct: 18465366 gttttaaaattttggccagg 18465347
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| ||| | ||||||||| Sbjct: 22821897 gtttatagaaaaatatattaacattttcaatacaaaat 22821934 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaa 378 ||||||||||||||||| ||| ||| |||||||||| Sbjct: 9058246 gtttatagaaaaatatagcaatattttcgatacaaaa 9058210 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaa 362 ||||||||||||||||||||| Sbjct: 229068 gtttatagaaaaatatatcaa 229088 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 37683251 gtttatagaaaaatatatca 37683232 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatatatcaacgttta 368 |||| ||| ||||||||||||||||| |||| |||| Sbjct: 18186195 tttgaccaagtttatagaaaaatatagcaacattta 18186230
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaacgttta 368 ||||||||||||||||||||| |||| Sbjct: 115385 tttatagaaaaatatatcaacattta 115360
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| ||| | ||||||||| Sbjct: 25454 gtttatagaaaaatatattaacattttcaatacaaaat 25491
>dbj|AB117754.1| Oryza sativa (indica cultivar-group) DNA, indica specific region near the Rf-1 locus Length = 8200 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| |||| ||||||||| Sbjct: 4508 gtttatagaaaaatatattaacatttataatacaaaat 4545
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| | ||| ||||||||| Sbjct: 84717 gtttatagaaaaatatattaacatctaccatacaaaat 84754
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tctggctctctgtgtttccttg 595 |||||||||||||||||||||| Sbjct: 165998 tctggctctctgtgtttccttg 166019
>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045F02 Length = 143668 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaac 363 |||||||||||||||||||||| Sbjct: 91147 gtttatagaaaaatatatcaac 91126
>gb|DQ020487.1| Sus scrofa clone BAC KNP_375G9, complete sequence Length = 142071 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 agaagtttgattttgaccttgg 183 |||||||||||||||||||||| Sbjct: 48246 agaagtttgattttgaccttgg 48225
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| ||| | ||||||||| Sbjct: 139286 gtttatagaaaaatatattaacattttcaatacaaaat 139323
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ttaaaattttggccaggtttatagaaaaatatatcaac 363 |||||| || ||||| ||||||||||||||||| |||| Sbjct: 68949 ttaaaagttcggccaagtttatagaaaaatataacaac 68912
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 580 tctctgtgtttccttgaaacat 601 |||||||||||||||||||||| Sbjct: 51259 tctctgtgtttccttgaaacat 51238
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||||||| ||| |||| ||||||||| Sbjct: 18331606 gtttatagaaaaatatattaacatttataatacaaaat 18331569 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaa 362 ||||||||||||||||||||| Sbjct: 15340654 gtttatagaaaaatatatcaa 15340674
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||| ||||||||||||||||| Sbjct: 26420877 tttggccaagtttatagaaaaatata 26420902 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 7184849 tttatagaaaaatatatcaac 7184869 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 ttttagtttacttcgcatattaggttggtttt 312 |||||| |||| || ||||||||||||||||| Sbjct: 10973408 ttttaggttacatcacatattaggttggtttt 10973439 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 caggtttatagaaaaatata 358 |||||||||||||||||||| Sbjct: 2521190 caggtttatagaaaaatata 2521209
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 333 tttggccaggtttatagaaaaatata 358 |||||||| ||||||||||||||||| Sbjct: 49368 tttggccaagtttatagaaaaatata 49343
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaat 379 |||||||||||||| || |||| ||||| ||||||||| Sbjct: 2350 gtttatagaaaaatttagcaacatttacaatacaaaat 2387
>gb|AY422167.1| Zea mays enhancer of zeste-like 1 (mez1) gene, complete cds Length = 13084 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatac 374 |||||||||||||||||| ||| ||||| |||| Sbjct: 5214 gtttatagaaaaatatattaacatttacaatac 5182
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaa 378 ||||||||||||||||| ||| ||| |||||||||| Sbjct: 109225 gtttatagaaaaatataacaatatttccgatacaaaa 109261
>ref|XM_366810.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02886.4) partial mRNA Length = 1359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gagctgctggccaggatccag 88 ||||||||||||||||||||| Sbjct: 1168 gagctgctggccaggatccag 1188
>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026G02, complete sequence Length = 123472 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 94143 tttatagaaaaatatatcaac 94163 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 74360 tttatagaaaaatatatcaac 74380
>gb|AC124710.4| Mus musculus BAC clone RP24-92A2 from chromosome 1, complete sequence Length = 162618 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 tgtcttctttctgtccacctt 563 ||||||||||||||||||||| Sbjct: 133812 tgtcttctttctgtccacctt 133832
>ref|XM_741654.1| Aspergillus fumigatus Af293 RNA polymerase Rpc34 subunit (Afu7g01850) partial mRNA Length = 1059 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ccgtcggatagccctgatagc 135 ||||||||||||||||||||| Sbjct: 709 ccgtcggatagccctgatagc 689
>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence Length = 192592 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 tgtcttctttctgtccacctt 563 ||||||||||||||||||||| Sbjct: 147291 tgtcttctttctgtccacctt 147271
>gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complete sequence Length = 158271 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 ctggctctctgtgtttccttg 595 ||||||||||||||||||||| Sbjct: 87943 ctggctctctgtgtttccttg 87923
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 22733343 tttatagaaaaatatatcaac 22733363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 22713560 tttatagaaaaatatatcaac 22713580 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaa 377 |||||||||||||||||| ||| ||| | ||||||| Sbjct: 14376136 gtttatagaaaaatatattaacattttcaatacaaa 14376101 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 |||||||||||||| ||||||||| Sbjct: 1807247 gtttatagaaaaatgtatcaacgt 1807270
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 326 ttaaaattttggccaggtttatagaaaaatata 358 |||||| |||| ||| ||||||||||||||||| Sbjct: 26477244 ttaaaagtttgaccaagtttatagaaaaatata 26477212 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aggtttatagaaaaatatatcaac 363 ||||||||||||||||||| |||| Sbjct: 24725905 aggtttatagaaaaatataacaac 24725882
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaa 362 ||||||||||||||||||||| Sbjct: 49776 gtttatagaaaaatatatcaa 49796
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaaa 378 ||||||||||||||||| ||| ||| |||||||||| Sbjct: 87253 gtttatagaaaaatatagcaatattttcgatacaaaa 87217
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 tttggccaggtttatagaaaa 353 ||||||||||||||||||||| Sbjct: 83704 tttggccaggtttatagaaaa 83684
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatata 358 ||||||| ||| ||||||||||||||||| Sbjct: 2227 aattttgaccatgtttatagaaaaatata 2199
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaa 362 ||||||||||||||||||||| Sbjct: 70738 gtttatagaaaaatatatcaa 70758
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 326 ttaaaattttggccaggtttatagaaaaatata 358 |||||| |||| ||| ||||||||||||||||| Sbjct: 89283 ttaaaagtttgaccaagtttatagaaaaatata 89251
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 326 ttaaaattttggccaggtttatagaaaaatata 358 |||||| |||| ||| ||||||||||||||||| Sbjct: 10897 ttaaaagtttgaccaagtttatagaaaaatata 10865
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 330 aattttggccaggtttatagaaaaatata 358 ||||||| ||| ||||||||||||||||| Sbjct: 56868 aattttgaccaagtttatagaaaaatata 56896
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 aattttggccaggtttatagaaaaatata 358 ||||||| ||| ||||||||||||||||| Sbjct: 96288 aattttgaccatgtttatagaaaaatata 96260
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 23043254 tttatagaaaaatatatcaac 23043274 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 23023471 tttatagaaaaatatatcaac 23023491 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaa 377 |||||||||||||||||| ||| ||| | ||||||| Sbjct: 14458138 gtttatagaaaaatatattaacattttcaatacaaa 14458103 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 |||||||||||||| ||||||||| Sbjct: 1804968 gtttatagaaaaatgtatcaacgt 1804991
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 71145 tttatagaaaaatatatcaac 71125
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaac 363 ||||||||||||||||||||| Sbjct: 41283 tttatagaaaaatatatcaac 41303
>gb|AY572782.1| Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX2) mRNA, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1198 caggatccagaagctcaaac 1179
>ref|NM_126226.3| Arabidopsis thaliana pux2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2); nucleic acid binding / zinc ion binding AT2G01650 (pux2) mRNA, complete cds Length = 1655 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1297 caggatccagaagctcaaac 1278
>gb|AY644734.1| Geoffroea spinosa clone Gsp.B331 microsatellite sequence Length = 546 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 295 tttatagaaaaatatatcaa 314
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatcaacgtttacgatacaaa 377 |||||||||||||||||| ||| ||| | ||||||| Sbjct: 121748 gtttatagaaaaatatattaacattttcaatacaaa 121713
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggtttatagaaaaatatat 359 |||||||| |||| || |||||||||||||||||| Sbjct: 2768 ttttaaaagtttgatcaagtttatagaaaaatatat 2733
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tgtcgaggcgcaggtcaaga 246 |||||||||||||||||||| Sbjct: 2012392 tgtcgaggcgcaggtcaaga 2012373
>gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, complete sequence Length = 206182 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agagctgctggccaggatcc 86 |||||||||||||||||||| Sbjct: 168320 agagctgctggccaggatcc 168339
>gb|AC125028.8| Mus musculus chromosome 16, clone RP24-85G10, complete sequence Length = 269788 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 127906 tttatagaaaaatatatcaa 127887
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 |||||||||||||| ||||||||| Sbjct: 25077 gtttatagaaaaatgtatcaacgt 25100
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagggagagctgctggccag 81 |||||||||||||||||||| Sbjct: 395787 cagggagagctgctggccag 395806
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agagctgctggccaggatcc 86 |||||||||||||||||||| Sbjct: 47135 agagctgctggccaggatcc 47154
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tgtgatgtgagaagtttgat 172 |||||||||||||||||||| Sbjct: 79196 tgtgatgtgagaagtttgat 79215
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gcttctgaagtgcagcacct 532 |||||||||||||||||||| Sbjct: 31166 gcttctgaagtgcagcacct 31185
>ref|NM_019807.2| Mus musculus acid phosphatase, prostate (Acpp), transcript variant 2, mRNA Length = 2667 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gcttctgaagtgcagcacct 532 |||||||||||||||||||| Sbjct: 10 gcttctgaagtgcagcacct 29
>ref|NM_207668.2| Mus musculus acid phosphatase, prostate (Acpp), transcript variant 1, mRNA Length = 4488 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gcttctgaagtgcagcacct 532 |||||||||||||||||||| Sbjct: 10 gcttctgaagtgcagcacct 29
>emb|AL591803.10| Human DNA sequence from clone RP11-758C21 on chromosome 6 Contains dehydrogenase/reductase (SDR family) member 6 (DHRS6) pseudogene, complete sequence Length = 90325 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tgcttctgaagtgcagcacc 531 |||||||||||||||||||| Sbjct: 74135 tgcttctgaagtgcagcacc 74154
>emb|AL161728.25| Human DNA sequence from clone RP11-342C23 on chromosome 9 Contains the FBP1 gene for Fructose-1,6-bisphosphatase 1, a novel gene, the FBP2 gene for Fructose-1,6-bisphosphatase 2, a gene for a putative novel protein and one CpG island, complete sequence Length = 170532 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggt 343 |||||||||||||||||||| Sbjct: 19180 ttttaaaattttggccaggt 19161
>emb|AL138830.20| Human DNA sequence from clone RP3-399L15 on chromosome 6q21-22.2 Contains 2 putative novel genes, complete sequence Length = 141924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aggtttatagaaaaatatat 359 |||||||||||||||||||| Sbjct: 62185 aggtttatagaaaaatatat 62204
>emb|AL138918.17| Human DNA sequence from clone RP1-39J2 on chromosome 6 Contains the 5' end of the gene for smooth muscle cell associated protein 2 (SMAP2) or secreted modular calcium binding protein 2 (SMOC2) and three CpG islands, complete sequence Length = 121059 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gtgtgtcttctttctgtcca 559 |||||||||||||||||||| Sbjct: 92279 gtgtgtcttctttctgtcca 92298
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 agcttgtggaggtgaaggag 506 |||||||||||||||||||| Sbjct: 36039 agcttgtggaggtgaaggag 36058
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tgtcgaggcgcaggtcaaga 246 |||||||||||||||||||| Sbjct: 283715 tgtcgaggcgcaggtcaaga 283696
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tgtcgaggcgcaggtcaaga 246 |||||||||||||||||||| Sbjct: 91430 tgtcgaggcgcaggtcaaga 91411
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence Length = 202539 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 tgtttccttgaaacatttca 605 |||||||||||||||||||| Sbjct: 77802 tgtttccttgaaacatttca 77821
>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete sequence Length = 204925 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 gtgtttccttgaaacatttc 604 |||||||||||||||||||| Sbjct: 35387 gtgtttccttgaaacatttc 35406
>gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map rga, complete sequence Length = 89138 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 74416 caggatccagaagctcaaac 74397
>gb|AC005684.2| Homo sapiens chromosome 11p14.4 clone PAC pDJ606K4, complete sequence Length = 143088 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ttttaagtcaataggtttta 328 |||||||||||||||||||| Sbjct: 64029 ttttaagtcaataggtttta 64010
>gb|AC008925.4| Homo sapiens chromosome 5 clone CTD-2284O10, complete sequence Length = 131990 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 cattgtgttatttgttgctt 631 |||||||||||||||||||| Sbjct: 48919 cattgtgttatttgttgctt 48900
>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2, complete sequence Length = 244788 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gtttccttgaaacatttcaa 606 |||||||||||||||||||| Sbjct: 173425 gtttccttgaaacatttcaa 173406
>gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, complete sequence Length = 134286 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 ttctttctgtccaccttttt 566 |||||||||||||||||||| Sbjct: 59486 ttctttctgtccaccttttt 59505
>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence Length = 170272 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 ttctttctgtccaccttttt 566 |||||||||||||||||||| Sbjct: 28088 ttctttctgtccaccttttt 28107
>gb|AC021078.5| Homo sapiens chromosome 5 clone CTB-89H12, complete sequence Length = 145050 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ataggttttaaaattttggc 338 |||||||||||||||||||| Sbjct: 47712 ataggttttaaaattttggc 47693
>gb|AC153793.4| Mus musculus BAC clone RP23-154L21 from chromosome 12, complete sequence Length = 232433 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 aattttggccaggtttatag 349 |||||||||||||||||||| Sbjct: 191361 aattttggccaggtttatag 191342
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggtttatagaaaaatatat 359 |||||||| |||| || |||||||||||||||||| Sbjct: 72479 ttttaaaagtttgatcaagtttatagaaaaatatat 72444
>dbj|AK076383.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732480P03 product:acid phosphatase, prostate, full insert sequence Length = 4486 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gcttctgaagtgcagcacct 532 |||||||||||||||||||| Sbjct: 17 gcttctgaagtgcagcacct 36
>emb|BX820882.1|CNS0A9KA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1296 caggatccagaagctcaaac 1277
>emb|BX820565.1|CNS0A9MJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1530 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1212 caggatccagaagctcaaac 1193
>emb|BX818883.1|CNS0A9PY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1273 caggatccagaagctcaaac 1254
>emb|BX820048.1|CNS0A9G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1579 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1278 caggatccagaagctcaaac 1259
>gb|BT005408.1| Arabidopsis thaliana clone U51117 unknown protein (At2g01650) mRNA, complete cds Length = 1408 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1198 caggatccagaagctcaaac 1179
>gb|AC068544.7| Homo sapiens BAC clone RP11-369J9 from 2, complete sequence Length = 159397 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 19243 gtttatagaaaaatatatca 19262
>gb|AY084317.1| Arabidopsis thaliana clone 103882 mRNA, complete sequence Length = 1644 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1286 caggatccagaagctcaaac 1267
>gb|AC064847.4| Homo sapiens BAC clone RP11-63C2 from 2, complete sequence Length = 138928 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tatagaaaaatatatcaacgttta 368 ||||||| |||||||||||||||| Sbjct: 60160 tatagaacaatatatcaacgttta 60183
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 143725 gtttatagaaaaatatatca 143706
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 11552 gtttatagaaaaatatatca 11533
>gb|AC127033.11| Homo sapiens chromosome 11, clone RP11-237K1, complete sequence Length = 136544 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ttttaagtcaataggtttta 328 |||||||||||||||||||| Sbjct: 72591 ttttaagtcaataggtttta 72610
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 71447 tttatagaaaaatatatcaa 71428
>dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1075D06 Length = 130528 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 333 tttggccaggtttatagaaaaatatatcaacgttta 368 |||| ||| ||||||||||||||||| |||| |||| Sbjct: 37640 tttgaccaagtttatagaaaaatatagcaacattta 37675
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aggtttatagaaaaatatatcaac 363 ||||||||||||||||||| |||| Sbjct: 59586 aggtttatagaaaaatataacaac 59563
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 ||||||||||||||||| |||||| Sbjct: 26841 gtttatagaaaaatatagcaacgt 26864
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatcaacgt 365 ||||||||||||||||| |||||| Sbjct: 114119 gtttatagaaaaatatagcaacgt 114142
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gtttatagaaaaatatatca 361 |||||||||||||||||||| Sbjct: 29832 gtttatagaaaaatatatca 29851
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 10120 tttatagaaaaatatatcaa 10101
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gttttaaaattttggccagg 342 |||||||||||||||||||| Sbjct: 6505 gttttaaaattttggccagg 6486
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gttttaaaattttggccagg 342 |||||||||||||||||||| Sbjct: 128290 gttttaaaattttggccagg 128271
>dbj|AK118911.1| Arabidopsis thaliana At2g01650 mRNA for unknown protein, complete cds, clone: RAFL21-25-I03 Length = 1646 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caggatccagaagctcaaac 98 |||||||||||||||||||| Sbjct: 1289 caggatccagaagctcaaac 1270
>dbj|AK070637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056J01, full insert sequence Length = 2649 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 agcttgtggaggtgaaggag 506 |||||||||||||||||||| Sbjct: 139 agcttgtggaggtgaaggag 120
>gb|AY620503.1| Saimiri sciureus sciureus Alu insertion locus Aotus_2D_108_Saimiri_11 sequence Length = 203 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggt 343 |||||||||||||||||||| Sbjct: 168 ttttaaaattttggccaggt 149
>gb|AY620502.1| Pithecia pithecia pithecia Alu insertion locus Aotus_2D_108_Pithecia_11 sequence Length = 292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggt 343 |||||||||||||||||||| Sbjct: 170 ttttaaaattttggccaggt 151
>gb|AY620501.1| Aotus trivirgatus Alu insertion locus Aotus_2D_108_Aotus_11 sequence Length = 613 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ttttaaaattttggccaggt 343 |||||||||||||||||||| Sbjct: 170 ttttaaaattttggccaggt 151
>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence Length = 190900 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gcttctgaagtgcagcacct 532 |||||||||||||||||||| Sbjct: 114388 gcttctgaagtgcagcacct 114369
>dbj|AP003158.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences Length = 194260 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 attttggccaggtttataga 350 |||||||||||||||||||| Sbjct: 119220 attttggccaggtttataga 119239
>gb|AC004601.1|AC004601 Human 11p14.3 PAC clone pDJ939m16, complete sequence Length = 132867 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ttttaagtcaataggtttta 328 |||||||||||||||||||| Sbjct: 101110 ttttaagtcaataggtttta 101091
>gb|AC158396.2| Mus musculus BAC clone RP23-255D19 from chromosome 14, complete sequence Length = 188538 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 caggtttatagaaaaatata 358 |||||||||||||||||||| Sbjct: 114910 caggtttatagaaaaatata 114891
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 ttttagtttacttcgcatattaggttggtttt 312 |||||| |||| || ||||||||||||||||| Sbjct: 122772 ttttaggttacatcacatattaggttggtttt 122803
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 281 ttttagtttacttcgcatattaggttggtttt 312 |||||| |||| || ||||||||||||||||| Sbjct: 131866 ttttaggttacatcacatattaggttggtttt 131835
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 caggtttatagaaaaatata 358 |||||||||||||||||||| Sbjct: 22246 caggtttatagaaaaatata 22227
>emb|CR974454.17| Mouse DNA sequence from clone CH25-145G14 on chromosome X, complete sequence Length = 65895 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 44428 tttatagaaaaatatatcaa 44447
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ctcgtcgcagggagagctgctggc 78 ||||| |||||||||||||||||| Sbjct: 578490 ctcgtggcagggagagctgctggc 578467
>gb|AC171211.1| Mus musculus BAC clone RP23-34I14 from chromosome 16, complete sequence Length = 230462 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 attttggccaggtttataga 350 |||||||||||||||||||| Sbjct: 110227 attttggccaggtttataga 110246
>gb|J04421.1|YSCPMA2A Saccharomyces cerevisiae ATPase (PMA2) gene, complete cds Length = 5067 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ttatagaaaaatatatcaac 363 |||||||||||||||||||| Sbjct: 4447 ttatagaaaaatatatcaac 4428
>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete sequence Length = 166025 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tttatagaaaaatatatcaa 362 |||||||||||||||||||| Sbjct: 92273 tttatagaaaaatatatcaa 92254
>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete sequence Length = 132773 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ttttaagtcaataggtttta 328 |||||||||||||||||||| Sbjct: 9368 ttttaagtcaataggtttta 9387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,801,594 Number of Sequences: 3902068 Number of extensions: 6801594 Number of successful extensions: 144998 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 142043 Number of HSP's gapped (non-prelim): 2955 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
