ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41m11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X14106.1|CHHVPSBC Hordeum vulgare chloroplast psbC gene for chlorophyll a/b-binding protein of photosystem II core Length = 928 Score = 1068 bits (539), Expect = 0.0 Identities = 576/592 (97%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 207 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 267 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 268 ccacacttagctactctaggttggggagtagggccagggggggaagttctagatactttt 327 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 387 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 447 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 507 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 567 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gcccctggggggggagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 627 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 687 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 739
>emb|X13366.1|CHSCPSBD Secale cereale chloroplast psbD, psbC and trnS genes for D2 polypeptide, Chl a-binding protein and tRNA-Ser(uga) Length = 2992 Score = 1021 bits (515), Expect = 0.0 Identities = 560/580 (96%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 1524 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 1584 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1585 actctaggttggggagtagggccagggggggaagttctagatacttttccatactttgta 1644 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1645 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcc 1704 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1705 cttctgggacccgagactcttgaggaatcgtttccattctttggttatgtctggaaagat 1764 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1765 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 1824 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1825 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctgggggg 1884 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1885 ggagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 1944 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1945 ctaaaatctccttttggtggagaagggtggattgttagtgtagatgatttagaagatata 2004 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2005 attggtggacatgtatggttgggttttatttgtgtatttg 2044
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 934 bits (471), Expect = 0.0 Identities = 546/576 (94%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10163 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 10222 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10223 catttcgtaccagaaaagcccatgtatggacaagggttgattttacttccacacttagct 10282 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||||||||||||| |||||||||||||| |||| ||||||||| Sbjct: 10283 actctaggttggggagtagggccagggggagaagttctagatactcttccgtactttgta 10342 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10343 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 10402 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10403 cttctgggacccgagactcttgaggaatcttttccattctttggttatgtctggaaagat 10462 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 10463 agaaataaaatgactacaattttgggtacccacttaattttgttaggcctaggtgcttct 10522 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10523 cttctagtactcaaggctctttattttgccggtgtatatgatacctgggcccctggggga 10582 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 10583 ggagatgtaagaaaaattaccaatttgacccttagccctagtgttatatttggttatttc 10642 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10643 ctaaaacctccttttggtggagaagggtggattgttagtgtagatgatttagaagatata 10702 Query: 567 attggtggacatgtatggttgggttttatttgtgta 602 |||||||| ||||||||||||||||||||||||||| Sbjct: 10703 attggtgggcatgtatggttgggttttatttgtgta 10738
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 910 bits (459), Expect = 0.0 Identities = 543/576 (94%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10245 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 10304 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10305 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccgcacttagct 10364 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 10365 actctaggttggggagtagggccggggggagaagttctagatacttttccttactttgta 10424 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10425 tccggagtacttcacttaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 10484 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10485 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtatggaaagat 10544 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10545 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 10604 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10605 cttctagtactcaaggctctttattttggcggcgtatatgatacctgggcccccgggggg 10664 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 10665 ggggatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttattta 10724 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 10725 ctaaaatccccttttgggggagaaggatggattgttagtgtggatgatttagaagatata 10784 Query: 567 attggtggacatgtatggttgggttttatttgtgta 602 ||||| ||||||||||||||||||| ||||||||| Sbjct: 10785 attgggggacatgtatggttgggttccatttgtgta 10820
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 910 bits (459), Expect = 0.0 Identities = 543/576 (94%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10593 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 10652 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10653 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccgcacttagct 10712 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 10713 actctaggttggggagtagggccggggggagaagttctagatacttttccttactttgta 10772 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10773 tccggagtacttcacttaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 10832 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10833 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtatggaaagat 10892 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10893 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 10952 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10953 cttctagtactcaaggctctttattttggcggcgtatatgatacctgggcccccgggggg 11012 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 11013 ggggatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttattta 11072 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 11073 ctaaaatccccttttgggggagaaggatggattgttagtgtggatgatttagaagatata 11132 Query: 567 attggtggacatgtatggttgggttttatttgtgta 602 ||||| ||||||||||||||||||| ||||||||| Sbjct: 11133 attgggggacatgtatggttgggttccatttgtgta 11168
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 896 bits (452), Expect = 0.0 Identities = 543/577 (94%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72219 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 72278 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 72279 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccgcacttagct 72338 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 72339 actctaggttggggagtagggccggggggagaagttctagatacttttccttactttgta 72398 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72399 tccggagtacttcacttaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 72458 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 72459 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtatggaaagat 72518 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72519 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 72578 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctggg-cccctnnnnn 445 |||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 72579 cttctagtactcaaggctctttattttggcggcgtatatgatacctgggcccccgggggg 72638 Query: 446 nnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattt 505 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 72639 gggggatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttattt 72698 Query: 506 actaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatat 565 ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 72699 actaaaatccccttttgggggagaaggatggattgttagtgtggatgatttagaagatat 72758 Query: 566 aattggtggacatgtatggttgggttttatttgtgta 602 |||||| ||||||||||||||||||| ||||||||| Sbjct: 72759 aattgggggacatgtatggttgggttccatttgtgta 72795
>ref|XM_465411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 148 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 207 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 208 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 267 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 268 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 327 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 328 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 387 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 388 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 447 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 448 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 507 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 508 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 567 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 568 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 627 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 628 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 687 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 688 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 739
>ref|NM_195972.1| Oryza sativa (japonica cultivar-group) putative PSII 43kDa protein from chromosome 10 chloroplast insertion (OSJNBb0075K12.22), mRNA Length = 1422 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 148 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 207 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 208 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 267 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 268 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 327 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 328 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 387 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 388 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 447 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 448 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 507 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 508 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 567 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 568 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 627 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 628 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 687 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 688 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 739
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10058 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10117 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10118 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10177 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10178 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10237 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10238 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10297 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10298 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10357 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10358 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10417 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10418 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10477 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10478 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10537 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10538 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10597 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10598 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10649
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10058 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10117 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10118 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10177 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10178 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10237 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10238 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10297 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10298 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10357 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10358 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10417 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10418 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10477 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10478 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10537 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10538 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10597 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10598 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10649
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9995 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10054 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10055 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10114 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10115 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10174 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10175 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10234 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10235 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10294 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10295 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10354 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10355 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10414 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10415 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10474 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10475 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10534 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10535 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10586
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10056 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10115 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10116 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10175 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10176 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10235 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10236 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10295 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10296 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10355 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10356 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10415 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10416 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10475 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10476 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10535 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10536 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10595 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10596 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10647
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93405 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 93464 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 93465 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 93524 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93525 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 93584 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93585 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 93644 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93645 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 93704 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 93705 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 93764 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 93765 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 93824 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 93825 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 93884 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 93885 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 93944 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 93945 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 93996
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8280 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 8339 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8340 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 8399 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 8400 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 8459 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 8460 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 8519 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8520 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 8579 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 8580 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 8639 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 8640 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 8699 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 8700 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 8759 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 8760 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 8819 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 8820 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 8871
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 83213 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 83272 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 83273 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 83332 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 83333 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 83392 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 83393 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 83452 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 83453 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 83512 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 83513 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 83572 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 83573 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 83632 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 83633 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 83692 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 83693 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 83752 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 83753 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 83804
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9135379 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 9135438 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9135439 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 9135498 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9135499 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 9135558 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9135559 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 9135618 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9135619 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 9135678 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9135679 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 9135738 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 9135739 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 9135798 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 9135799 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 9135858 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 9135859 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 9135918 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 9135919 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 9135970 Score = 472 bits (238), Expect = e-130 Identities = 296/318 (93%) Strand = Plus / Plus Query: 289 aagaatcttttccattctttggttatgtctggaaagatagaaataaaatgactacaattt 348 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9239558 aagaatcttttccattctttggttatgtgtggaaagatagaaataaaatgactacaattt 9239617 Query: 349 tgggtattcacttaattttgttaggtctaggtgcttttcttctagtactcaaggctcttt 408 ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 9239618 tgggtattcacctaattttgttaggtataggtgcttttcttctagtactcaaagctcttt 9239677 Query: 409 attttggcggtgtatatgatacctgggcccctnnnnnnnnagatgtaagaaaaattacca 468 ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| Sbjct: 9239678 attttggcggtatatatgatacctgggctcctgggggaggagatgtaagaaaaattacca 9239737 Query: 469 atttgacccttagtcccagtgttatatttggttatttactaaaatctccttttgggggag 528 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9239738 atttgacccttagccccggtgttatatttggttatttactaaaatccccttttgggggag 9239797 Query: 529 aagggtggattgttagtgtagatgatttagaagatataattggtggacatgtatggttgg 588 | || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 9239798 agggttggattgttagtgtggatgatttagaagatataattgggggacatgtatggttgg 9239857 Query: 589 gttttatttgtgtatttg 606 |||| ||||||||||||| Sbjct: 9239858 gtttcatttgtgtatttg 9239875 Score = 67.9 bits (34), Expect = 4e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagc 64 ||||||||| ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 9212330 cttggagctcacgtagcccatgcaggattaatcgtattctggtccggagc 9212379
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10301888 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10301947 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10301948 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10302007 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10302008 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10302067 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10302068 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10302127 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10302128 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10302187 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10302188 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10302247 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10302248 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10302307 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10302308 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10302367 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10302368 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10302427 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10302428 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10302479 Score = 868 bits (438), Expect = 0.0 Identities = 552/592 (93%), Gaps = 2/592 (0%) Strand = Plus / Minus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21926484 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 21926425 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 21926424 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 21926365 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 21926364 ccgcacttagctactctaggttggggagtagggcccgggggagaatttctagatactttt 21926305 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 21926304 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 21926245 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21926244 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 21926185 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21926184 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 21926125 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 21926124 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctag 21926065 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 21926064 gctcct-ggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 21926006 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 21926005 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 21925946 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 21925945 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 21925894 Score = 172 bits (87), Expect = 9e-40 Identities = 129/143 (90%) Strand = Plus / Minus Query: 464 taccaatttgacccttagtcccagtgttatatttggttatttactaaaatctccttttgg 523 |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 18676400 taccaatttgacccttagctccagtgttatatttggttacttactaaaatccccttttgg 18676341 Query: 524 gggagaagggtggattgttagtgtagatgatttagaagatataattggtggacatgtatg 583 |||||| || |||||||||||| ||||||||||||| |||||| || ||||||||||| Sbjct: 18676340 gggagagggtcagattgttagtgtggatgatttagaaggtataatcgggggacatgtatg 18676281 Query: 584 gttgggttttatttgtgtatttg 606 ||||||||| || |||||||||| Sbjct: 18676280 gttgggtttcatctgtgtatttg 18676258 Score = 161 bits (81), Expect = 3e-36 Identities = 87/89 (97%) Strand = Plus / Minus Query: 61 gagcaatgaacctatttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaag 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7654218 gagcaatgaacctatttgaagtggcccatttcgtaccagaaaatcccatgtatgaacaag 7654159 Query: 121 ggttgattttacttccacacttagctact 149 |||||||||||||||| |||||||||||| Sbjct: 7654158 ggttgattttacttccgcacttagctact 7654130
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Minus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14386262 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 14386203 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14386202 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 14386143 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14386142 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 14386083 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14386082 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 14386023 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14386022 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 14385963 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 14385962 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 14385903 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 14385902 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 14385843 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 14385842 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 14385783 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 14385782 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 14385723 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 14385722 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 14385671 Score = 151 bits (76), Expect = 3e-33 Identities = 102/113 (90%) Strand = Plus / Plus Query: 127 ttttacttccacacttagctactctaggttggggagtagggccannnnnnnaagttctag 186 |||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19434552 ttttacttccgcacttagctactctaggttggggagtagggcccgggggagaagttctag 19434611 Query: 187 atacttttccatactttgtatctggcgtacttcacctaatttcctccgcagtc 239 ||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 19434612 atacttttccatactttgtatctggagtacttcatctaatttcctccgcagtc 19434664
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33562069 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 33562128 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33562129 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 33562188 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33562189 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 33562248 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 33562249 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 33562308 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33562309 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 33562368 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 33562369 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 33562428 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 33562429 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 33562488 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 33562489 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 33562548 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 33562549 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 33562608 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 33562609 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 33562660
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107266 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 107325 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107326 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 107385 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107386 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 107445 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107446 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 107505 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107506 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 107565 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107566 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 107625 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 107626 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 107685 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 107686 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 107745 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 107746 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 107805 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 107806 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 107857
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Minus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 108184 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 108125 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 108124 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 108065 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 108064 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 108005 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 108004 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 107945 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107944 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 107885 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107884 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 107825 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 107824 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 107765 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 107764 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 107705 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 107704 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 107645 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 107644 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 107593
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10307927 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10307986 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10307987 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10308046 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10308047 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10308106 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10308107 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10308166 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10308167 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10308226 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10308227 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10308286 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10308287 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10308346 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10308347 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10308406 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10308407 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10308466 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10308467 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10308518 Score = 868 bits (438), Expect = 0.0 Identities = 552/592 (93%), Gaps = 2/592 (0%) Strand = Plus / Minus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21938147 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 21938088 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 21938087 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 21938028 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 21938027 ccgcacttagctactctaggttggggagtagggcccgggggagaatttctagatactttt 21937968 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 21937967 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 21937908 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21937907 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 21937848 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21937847 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 21937788 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 21937787 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctag 21937728 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 21937727 gctcct-ggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 21937669 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 21937668 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 21937609 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 21937608 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 21937557 Score = 172 bits (87), Expect = 9e-40 Identities = 129/143 (90%) Strand = Plus / Minus Query: 464 taccaatttgacccttagtcccagtgttatatttggttatttactaaaatctccttttgg 523 |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 18687253 taccaatttgacccttagctccagtgttatatttggttacttactaaaatccccttttgg 18687194 Query: 524 gggagaagggtggattgttagtgtagatgatttagaagatataattggtggacatgtatg 583 |||||| || |||||||||||| ||||||||||||| |||||| || ||||||||||| Sbjct: 18687193 gggagagggtcagattgttagtgtggatgatttagaaggtataatcgggggacatgtatg 18687134 Query: 584 gttgggttttatttgtgtatttg 606 ||||||||| || |||||||||| Sbjct: 18687133 gttgggtttcatctgtgtatttg 18687111 Score = 161 bits (81), Expect = 3e-36 Identities = 87/89 (97%) Strand = Plus / Minus Query: 61 gagcaatgaacctatttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaag 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7658417 gagcaatgaacctatttgaagtggcccatttcgtaccagaaaatcccatgtatgaacaag 7658358 Query: 121 ggttgattttacttccacacttagctact 149 |||||||||||||||| |||||||||||| Sbjct: 7658357 ggttgattttacttccgcacttagctact 7658329
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 894 bits (451), Expect = 0.0 Identities = 554/592 (93%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9993 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 10052 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10053 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 10112 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10113 ccgcacttagctactctaggttggggagtagggcccgggggagaagttctagatactttt 10172 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10173 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 10232 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10233 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 10292 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10293 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 10352 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10353 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctgg 10412 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10413 gctcctgggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 10472 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 10473 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 10532 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 10533 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 10584
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 886 bits (447), Expect = 0.0 Identities = 540/576 (93%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10251 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 10310 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10311 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccgcacttagct 10370 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||||||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 10371 actctaggttggggagtagggtcggggggagaagttctagatacttttccttactttgta 10430 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10431 tccggagtacttcacttaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 10490 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 10491 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtatggcaagat 10550 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10551 agaaataaaatgactacacttttgggtattcacttaattttgttaggtctaggtgctttt 10610 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10611 cttctagtactcaaggctctttattttggcggcgtatatgatacctgggccccggggggg 10670 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 10671 ggggatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttattta 10730 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 10731 ctaaaatccccttttgggggagaaggatggattgttagtgtggatgatttagaagatata 10790 Query: 567 attggtggacatgtatggttgggttttatttgtgta 602 ||||| ||||||||||||||||||| ||||||||| Sbjct: 10791 attgggggacatgtatggttgggttccatttgtgta 10826
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 868 bits (438), Expect = 0.0 Identities = 552/592 (93%), Gaps = 2/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 81837 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaaccta 81896 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 81897 tttgaagtggcccatttcgtaccagaaaaacccatgtatgaacaagggttgattttactt 81956 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 81957 ccgcacttagctactctaggttggggagtagggcccgggggagaatttctagatactttt 82016 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 82017 ccgtactttgtatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggc 82076 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 82077 atttatcacgcgcttctgggaccggagactcttgaagaatcttttccattctttggttat 82136 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 82137 gtgtggaaagatagaaataaaatgactacaattttgggtattcacctaattttgttaggt 82196 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 82197 ataggtgcttttcttctagtactcaaagctctttattttggcggtatatatgatacctag 82256 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || ||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 82257 gctcct-ggggaggagatgtaagaaaaattaccaatttgacccttagccccggtgttata 82315 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 82316 tttggttatttactaaaatccccttttgggggagagggttggattgttagtgtggatgat 82375 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 82376 ttagaagatataattgggggacatgtatggttgggtttcatttgtgtatttg 82427
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 866 bits (437), Expect = 0.0 Identities = 542/582 (93%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141096 acgtagcccatgcaggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 141155 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 141156 cccatttcgtactagaaaaacccatgtatgaacaagggttgattttacttccgcacttag 141215 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 141216 ctactctaggttggggagtagggcccgggggagaagttctagatacttttccgtactttg 141275 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141276 tatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggcatttatcacg 141335 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141336 cgcttctgggaccggagactcttgaagaatcttttccattctttggttatgtgtggaaag 141395 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 141396 atagaaataaaatgactacaattttgggtattcacctaattttgttaggtataggtgctt 141455 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||||| | |||||||||||||||| ||| Sbjct: 141456 ttcttctagtactcaaagctctttattttggcgatatatatgatacctgggctcctgggg 141515 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 141516 gaggagatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttatt 141575 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| |||||||||||||| || |||||||||||||| |||||||||||| ||| Sbjct: 141576 tactaaaatccccttttgggggagagggttggattgttagtgtggatgatttagaacata 141635 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 141636 taattgggggacatgtatggttgggtttcatttgtgtatttg 141677
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 866 bits (437), Expect = 0.0 Identities = 542/582 (93%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4183 acgtagcccatgcaggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 4242 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 4243 cccatttcgtactagaaaaacccatgtatgaacaagggttgattttacttccgcacttag 4302 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 4303 ctactctaggttggggagtagggcccgggggagaagttctagatacttttccgtactttg 4362 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4363 tatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggcatttatcacg 4422 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4423 cgcttctgggaccggagactcttgaagaatcttttccattctttggttatgtgtggaaag 4482 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 4483 atagaaataaaatgactacaattttgggtattcacctaattttgttaggtataggtgctt 4542 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||||| | |||||||||||||||| ||| Sbjct: 4543 ttcttctagtactcaaagctctttattttggcgatatatatgatacctgggctcctgggg 4602 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 4603 gaggagatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttatt 4662 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| |||||||||||||| || |||||||||||||| |||||||||||| ||| Sbjct: 4663 tactaaaatccccttttgggggagagggttggattgttagtgtggatgatttagaacata 4722 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 4723 taattgggggacatgtatggttgggtttcatttgtgtatttg 4764
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 866 bits (437), Expect = 0.0 Identities = 542/582 (93%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12843637 acgtagcccatgcaggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 12843696 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 12843697 cccatttcgtactagaaaaacccatgtatgaacaagggttgattttacttccgcacttag 12843756 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 12843757 ctactctaggttggggagtagggcccgggggagaagttctagatacttttccgtactttg 12843816 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12843817 tatctggagtacttcatctaatttcctccgcagtcttaggcttcggtggcatttatcacg 12843876 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12843877 cgcttctgggaccggagactcttgaagaatcttttccattctttggttatgtgtggaaag 12843936 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 12843937 atagaaataaaatgactacaattttgggtattcacctaattttgttaggtataggtgctt 12843996 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||||| | |||||||||||||||| ||| Sbjct: 12843997 ttcttctagtactcaaagctctttattttggcgatatatatgatacctgggctcctgggg 12844056 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 12844057 gaggagatgtaagaaaaattaccaatttgacccttagccccggtgttatatttggttatt 12844116 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| |||||||||||||| || |||||||||||||| |||||||||||| ||| Sbjct: 12844117 tactaaaatccccttttgggggagagggttggattgttagtgtggatgatttagaacata 12844176 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 12844177 taattgggggacatgtatggttgggtttcatttgtgtatttg 12844218 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 343 caattttgggtattcacttaattttgt 369 ||||||| ||||||||||||||||||| Sbjct: 26934236 caattttaggtattcacttaattttgt 26934210
>gb|AY147643.1| Japonolirion osense photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 765 bits (386), Expect = 0.0 Identities = 518/567 (91%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccggagaagcccatgtatgaacaaggattgattttacttccccacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| ||||||| ||||||||||||| Sbjct: 1207 ctactctaggttggggtgtaggtccggggggggaagttatagatacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147678.1| Chlorophytum comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 755 bits (381), Expect = 0.0 Identities = 528/582 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtacccgagaaacccatgtatgaacaaggattgattttacttccgcatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggcccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacccgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1447 ttcttctagtacttaaggctctttattttgggggtgtatatgatacctgggccccagggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1627 taattgggggacatgtatggttaggttccatttgtatatttg 1668
>gb|DQ069647.1| Typha latifolia photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 751 bits (379), Expect = 0.0 Identities = 536/592 (90%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 207 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 208 tttgaagtggctcatttcgtaccagaaaaacccatgtatgaacaaggattaattttactt 267 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||||||||||||||| ||||| || ||||| |||| || ||| Sbjct: 268 ccgcacctagctactctaggttggggggtaggtccggggggagaagttatagacaccttt 327 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || || Sbjct: 328 ccatactttgtatctggagtacttcacttaatttcctccgcagtcttaggctttggcggt 387 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 388 atttatcatgcccttcttggacctgagactcttgaagaatcttttccattcttcggttat 447 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 507 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| Sbjct: 508 ataggtgcttttcttctagtattcaaagctctttattttgggggtgtatatgatacctgg 567 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 568 gccccaggggggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttata 627 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 628 tttggttatttactaaaatctccttttggaggagaaggatggattgttagtgtggacgat 687 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 688 ttagaagatataattgggggacatgtatggttaggttccatttgtatatttg 739
>gb|AY147680.1| Smilacina racemosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 749 bits (378), Expect = 0.0 Identities = 522/575 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagaaaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || |||||| |||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 1267 tatctggagtccttcacttaatttcctctgcagtcttaggctttggtggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgaaactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 gaggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||||||||| | |||| ||||||| Sbjct: 1627 taattgggggacatgtatggctaggttctatttgt 1661
>gb|AY147664.1| Cyanastrum cordifolium photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 749 bits (378), Expect = 0.0 Identities = 522/575 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggttttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccatttttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggtgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaatttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||| ||||||| |||| ||||||| Sbjct: 1627 taattggaggacatctatggttaggttctatttgt 1661
>gb|AY147661.1| Blandfordia punicea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 749 bits (378), Expect = 0.0 Identities = 516/567 (91%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || || |||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaaccaatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| ||| ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccagggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggggtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147656.1| Typha angustifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 747 bits (377), Expect = 0.0 Identities = 535/592 (90%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtancccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagaaaaacccatgtatgaacaaggattaattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||||||||||||||| ||||| || ||||| |||| || ||| Sbjct: 1197 ccgcacctagctactctaggttggggggtaggtccggggggagaagttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctccgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1317 atttatcatgcccttcttggacctgagactcttgaagaatcttttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaatnaaatgactacaattttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtattcaaggctctttattttgggggtgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1497 gccccaggggggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatctccttttggaggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1617 ttagaagatataattgggggacatgtatggttaggttccatttgtatatttg 1668
>gb|DQ069648.1| Yucca schidigera photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 747 bits (377), Expect = 0.0 Identities = 527/582 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 158 acgtagcccatgccggattaatcgtattctgggccggggcaatgaacctatttgaagtgg 217 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 218 ctcatttcgtacccgagaaacccatgtatgaacaaggattgattttacttccgcacctag 277 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 278 ctactctaggttggggggtaggcccggggggggaagttatagacacctttccatactttg 337 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 338 tatctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcacg 397 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 398 cgcttcttggacccgagactcttgaggaatcctttccattcttcggttatgtatggaaag 457 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 458 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 517 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 518 ttcttctagtacttaaggctctttattttgggggtgtatatgatacctgggccccagggg 577 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 578 ggggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttatt 637 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 638 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 697 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 698 taattggaggacatgtatggttaggttccatttgtatatttg 739
>gb|AY147681.1| Muilla maritima photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 745 bits (376), Expect = 0.0 Identities = 524/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcattttgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||||| |||||||| ||||| || ||||| ||||||| ||| Sbjct: 1197 ccgcacttagctactctgggttggggggtaggtccggggggggaagttatagataccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| ||||||||| |||||||||| |||||||||||||| || || Sbjct: 1257 ccgtactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| |||||| Sbjct: 1317 atttatcacgcacttcttggacctgagactcttgaggaatcctttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtactcaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1497 gccccgggggggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatataattggaggacatgtatggttaggtt 1653
>gb|AY147660.1| Astelia alpina photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 743 bits (375), Expect = 0.0 Identities = 515/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccattctttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacnattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147684.1| Yucca glauca photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 741 bits (374), Expect = 0.0 Identities = 526/582 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggggcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtacccgagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggcccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacccgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1447 ttcttctagtacttaaggctctttattttgggggtgtatatgatacctgggccccagggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||| |||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaanaaaaattaccaacttgactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1627 taattggaggacatgtatggttaggttccatttgtatatttg 1668
>gb|AY147677.1| Asparagus officinalis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 741 bits (374), Expect = 0.0 Identities = 521/575 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagaaaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtacttaaagctctttattttgggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| || ||||||||| | |||| ||||||| Sbjct: 1627 taattggggggcatgtatggctaggttctatttgt 1661
>gb|AY147646.1| Ananas comosus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2146 Score = 739 bits (373), Expect = 0.0 Identities = 518/570 (90%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaacctt 1098 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1099 tttgaagtggctcatttcgtaccagagcaacccatgtatgaacaagggttgattttactt 1158 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||| ||||||||||| ||||| || ||||| |||| || ||| Sbjct: 1159 ccgcacctagctaccctaggttggggggtaggtccggggggggaagttatagacaccttt 1218 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| || || Sbjct: 1219 ccatactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggcggt 1278 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1279 atttatcatgcgcttctcggacctgagactcttgaagaatcttttccattcttcggttat 1338 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1339 gtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 1398 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1399 ataggtgcttttcttctagtactcaaggctctttattttgggggcgtatatgatacctgg 1458 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| ||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1459 gccccaggggggggagatgtaagaaaaattaccaacttgacccttagccccagtgttata 1518 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 1519 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgct 1578 Query: 555 ttagaagatataattggtggacatgtatgg 584 ||||||||||||||||| |||||||||||| Sbjct: 1579 ttagaagatataattgggggacatgtatgg 1608
>gb|AY147648.1| Dasypogon hookeri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 737 bits (372), Expect = 0.0 Identities = 523/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || || ||||||||||||||||||| ||||| || | ||| |||| || ||| Sbjct: 1197 ccgcatctagctactctaggttggggggtaggtccggggggggaggttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| || |||||| |||||||||| |||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagttcttcacttaatttcctctgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1317 atttatcatgcacttcttggacctgagactcttgaagaatcttttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactacaattttgggtattcacttaatcttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtactcaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 1497 gcccctggggggggagatgtaagaaaaattaccaacttgacccttagtccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatataattggaggacatgtatggttaggtt 1653
>gb|AY147683.1| Narcissus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 733 bits (370), Expect = 0.0 Identities = 514/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggagaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||| |||||||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaagggtctttattttgggggcgtatatgatacctgggcacccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaatttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagagggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| ||||||||||||||||||| Sbjct: 1627 taattggaggacatgtatggttgggtt 1653
>gb|AY147674.1| Xeronema callistemon photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 733 bits (370), Expect = 0.0 Identities = 514/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| ||| ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccagggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| || ||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgctgtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggcattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggtgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacacttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 1567 tactaaaatctccttttggtggagaaggatggattgttagtgtggatgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147654.1| Roystonea princeps photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2159 Score = 733 bits (370), Expect = 0.0 Identities = 522/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||| ||||||||||||||||||| ||||| || ||||| |||| || ||| Sbjct: 1197 ccacacctagctactctaggttggggggtaggtccggggggggaagttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 1317 atttatcatgcgcttcttggacctgagactcttgaagaatcttttccatttttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactacnattttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtactcaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||| ||||| || || ||||| || ||||||||| Sbjct: 1497 gcccctggggggggagatgtaagaaaaataaccaacttaacacttagcccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||| ||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttanaagatataattggaggacatgtatggttaggtt 1653
>gb|AY147679.1| Lomandra longifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 726 bits (366), Expect = 0.0 Identities = 519/575 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||| || |||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagaaaaacctatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| ||| ||||| ||||||| ||||| ||||||| Sbjct: 1207 ctactctaggttggggggtaggtccagggggagaagttatagatacctttccgtactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggttttggtggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaatcttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtgctcaaggctctttattttgggggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| || ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattactaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||||||||| | |||| ||||||| Sbjct: 1627 taattgggggacatgtatggctaggttctatttgt 1661
>gb|AY147682.1| Muscari comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 722 bits (364), Expect = 0.0 Identities = 511/565 (90%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattttgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 1149 cattttgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggtccggggggggaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||||||||| || || || |||||||||||| Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtcttaggttttggcggtatttatcacgcg 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 1329 cttcttggacctgagactcttgaggaatcctttccattctttggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 1389 agaaataaaatgactacaattttaggtattcacttaattttgttaggtataggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1449 cttctagtactcaaggctctttattttgggggcatatatgatacctgggcccctgggggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatttttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1569 ctaaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 1629 attgggggacatgtatggttaggtt 1653
>gb|AY147657.1| Xiphidium caeruleum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 714 bits (360), Expect = 0.0 Identities = 520/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggactaatcgtattctgggctggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacctatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||| ||||||||||||||||||||||||| || | ||| |||| || ||| Sbjct: 1197 ccacacctagctactctaggttggggagtaggtccggggggggaggttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1317 atttatcatgcgcttcttggacctgagactcttgaagaatcttttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactaccattttaggtattcatttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtactcaaggccgtttattttgggggtatatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1497 gcccctgggggaggagatgtaagaaaaattaccaacttgacccttagcccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1557 tttggctatttactaaaatctccttttgggggagaagggtggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatataattggaggacatgtatggttaggtt 1653
>gb|AY147653.1| Philydrum lanuginosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 714 bits (360), Expect = 0.0 Identities = 520/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| |||||||||||||||||||||| || || | ||| |||| || ||| Sbjct: 1197 ccgcacctagctactctaggttggggagtcggtccggggggggaggttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1317 atttatcatgcgcttcttggacctgagactcttgaagaatcttttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactaccattttgggtattcatttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||| Sbjct: 1437 ataggtgcttttcttctagtattcaaggctctttattttgggggcatatatgatacttgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1497 gcccctggggggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatataattggaggacatgtatggttaggtt 1653
>gb|AY147649.1| Ensete ventricosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 714 bits (360), Expect = 0.0 Identities = 520/577 (90%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggggcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||||||||||||||| ||||| || | ||| |||| || ||| Sbjct: 1197 ccgcacctagctactctaggttggggggtaggtccggggggagaggttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctctgcagtcttaggctttggtggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1317 atttatcatgcgcttcttggacccgagactcttgaagaatcttttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactaccatcttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||| Sbjct: 1437 ctaggtgcttttcttctggtactcaaggctgtttattttgggggcatatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||||||||| ||||||||||| || ||||| ||| Sbjct: 1497 gcccctggggggggagatgtaagaaaaattaccaacttgacccttagcccaagtgtcata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| || ||||||||||| |||| Sbjct: 1617 ttagaagatataattggggggcatgtatggttaggtt 1653
>gb|AY147669.1| Lanaria lanata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 710 bits (358), Expect = 0.0 Identities = 511/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggggtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagagggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 1627 taattggaggacatgtgtggttaggtt 1653
>gb|AY147666.1| Hemerocallis littorea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 710 bits (358), Expect = 0.0 Identities = 511/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 ataggaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccgagtgttatatttggttatg 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| ||||| |||||||| |||| Sbjct: 1627 taattggaggacacgtatggttaggtt 1653
>gb|AF528941.1| Tasmannia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 710 bits (358), Expect = 0.0 Identities = 511/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtattcaaggctctttattttgggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccctttggtggagaagggtggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||| ||||||| |||| Sbjct: 1627 taattggaggacatatatggttaggtt 1653
>gb|AF123820.1|AF123820 Drimys winteri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2161 Score = 710 bits (358), Expect = 0.0 Identities = 511/567 (90%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1124 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1125 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccatctag 1184 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| |||||||||||||||| Sbjct: 1185 ctactctaggttggggggtaggtccgggtggggaagttatagacacttttccatactttg 1244 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||| | Sbjct: 1245 tatctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcatg 1304 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1305 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1364 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1365 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1424 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1425 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1484 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1485 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1544 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 1545 tactaaaatctccctttggtggagaaggatggattgttagtgtggatgatttagaagata 1604 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||| ||||||| |||| Sbjct: 1605 taattggaggacatatatggttaggtt 1631
>gb|AY147644.1| Stemona tuberosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 702 bits (354), Expect = 0.0 Identities = 510/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggctggggggtaggtcccgggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggttttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttgggcctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattctgggtattcatttaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtgtatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF123826.1|AF123826 Saururus cernuus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 702 bits (354), Expect = 0.0 Identities = 510/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1144 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||||||| || ||||||||||||||||| || ||||||||||| || |||| Sbjct: 1145 cccatttcgtaccagagaaacccatgtatgaacaaggattaattttacttccccatttag 1204 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 1205 ctactctaggttggggagtaggtccgggtggggaagttatagacacctttccatactttg 1264 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| |||||||| || || |||||||| | Sbjct: 1265 tatctggagtacttcacttaatttcctctgcagttttaggctttggcggtatttatcatg 1324 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 1325 cgcttctaggacctgagactcttgaagaatcttttccgttctttggttatgtatggaaag 1384 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| | Sbjct: 1385 atagaaataaaatgaccactattttgggtattcacttaattttgttaggtataggtgcat 1444 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| |||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1445 ttcttctagtattcaaagctctttattttggaggcgtatatgacacctgggctcccgggg 1504 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1505 ggggagatgtaagaaaaattaccaacttgacccttagtccaagtgttatatttggttatt 1564 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1565 tactaaaatctccctttgggggagaaggttggattgttagtgtagacgatttagaagata 1624 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| || ||||||||||| |||| Sbjct: 1625 taattgggggccatgtatggttaggtt 1651
>gb|AY147676.1| Aphyllanthes monspeliensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 698 bits (352), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 | |||||||||||||||||||| || ||||| |||| || || |||||||||| Sbjct: 1207 ccactctaggttggggagtaggtccggggggggaagttatagacaccttcccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||| || ||||||||| ||||||||||||||||||||||||| || || |||||||||| Sbjct: 1267 tatccggagtacttcacttaatttcctccgcagtcttaggctttggcggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagacccttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||| | Sbjct: 1387 atagaaataaaatgaccacnattttgggtattcacttaattttattaggtataggtgcct 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1447 ttcttctagtacttaaggctctttattttggaggtgtatatgatacctgggccccagggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||| |||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggggatgtaanaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF528922.1| Canella winterana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 698 bits (352), Expect = 0.0 Identities = 508/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| || ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 1149 catttcgtaccagagaaacccatgtatgaacaaggattaattttacttcctcatctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggtccgggtggagaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| || Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1329 cttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1389 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtctaggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1449 cttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctgggggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1569 ctaaaatctccctttgggggagaaggatggattgttagtgtggacgatttagaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 1629 attggaggacatgtatggttaggtt 1653
>gb|AY147671.1| Phormium tenax photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 508/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggtgtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1387 ataggaataaaatgactacaatttngggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| |||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtattcaaggctctttatttngggggcgtatatgatacctgggcccctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||| |||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaanaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttantgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147663.1| Curculigo capitulata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 515/575 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 | |||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ccactctaggttggggggtaggcccgggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||| || ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatcgggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacccgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 1447 ttcttctagtattcaaagctctttattttgggggtatatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttggaggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||||| ||||| |||| ||||||| Sbjct: 1627 taattggaggacatgtttggttaggttctatttgt 1661
>gb|AY147658.1| Alania endlicheri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccgtactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggttttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacctaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||| |||||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaaggctatttattttgggggcgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| |||||||||||||| || |||||||| ||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagtccaagcgttatattcggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF528932.1| Pachysandra terminalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctttttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagcccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || | ||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||| Sbjct: 1387 atagaaataaaatgaccacgattttgggtattcacttaattttgttaggtataggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaatttgacccttagtccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatcgccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35185 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 35244 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 35245 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccatctag 35304 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 35305 ctactttaggttggggggtaggtccgggtggagaagttatagacacctttccatactttg 35364 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 35365 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 35424 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 35425 cccttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 35484 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 35485 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 35544 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 35545 ttcttctagtactcaaggctctttattttgggggtgtatatgatacctgggctccagggg 35604 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 35605 ggggagatgtaagaaaaattaccaatttgacccttagcccaggtgttatatttggttatt 35664 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 35665 tactaaaatctccctttgggggagaaggatggattgttagtgtggacgatttggaagata 35724 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 35725 taattggaggacatgtatggttaggtt 35751
>gb|AF123827.1|AF123827 Trochodendron aralioides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2177 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1141 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1142 ctcatttcgtaccagagaagcccatgtatgaacaaggattgattttacttccccatctag 1201 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1202 ctactctaggttggggggtaggtcccggtggggaagttatagacacctttccatactttg 1261 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| | Sbjct: 1262 tatctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatg 1321 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1322 cacttctcggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1381 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 1382 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggttctt 1441 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1442 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1501 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1502 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1561 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1562 tactaaaatcgccctttgggggagaagggtggattgttagtgtggacgatttagaagata 1621 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1622 taattggaggacatgtatggttaggtt 1648
>gb|AF123816.1|AF123816 Calycanthus floridus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactttaggttggggggtaggtccgggtggagaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cccttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggtgtatatgatacctgggctccagggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaatttgacccttagcccaggtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 1567 tactaaaatctccctttgggggagaaggatggattgttagtgtggacgatttggaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF239794.1| Spathiphyllum wallisii photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 694 bits (350), Expect = 0.0 Identities = 509/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccacgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1147 ctcatttcgtaccggaaaagcccatgtatgaacaaggattgattttacttccacatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccgggaggggaagttatagatacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 | ||||| ||| ||||| |||||||||| |||||||||||||| || ||||||||||| | Sbjct: 1267 tgtctggagtaattcacttaatttcctctgcagtcttaggctttggcggcatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttaggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| |||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1447 ttcttctagtattcaaagctctttattttggtggtgtatatgatacctgggctcccggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 || ||||||| |||||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tattaaaatccccttttggaggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF123814.1|AF123814 Asarum canadense photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2164 Score = 692 bits (349), Expect = 0.0 Identities = 520/582 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1136 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||||| || || |||||||||||||| |||||||||||||| || ||| Sbjct: 1137 ggcatttcgtaccagagaaacctatgtatgaacaaggattgattttacttccccatctag 1196 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 | |||||||||||||||||||| ||| ||||| |||| || ||||||||||||| Sbjct: 1197 cgactctaggttggggagtaggtccaggtggggaagttatagacacctttccatactttg 1256 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||||||||||||||||||||| || || |||||||| | Sbjct: 1257 tatctggagtacttcacttaatttcctccgcagtcttaggctttggcggtatttatcatg 1316 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1317 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1376 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1377 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1436 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1437 ttcttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1496 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1497 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1556 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1557 tactaaaatctccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1616 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 |||| || |||||||||||||| |||| |||||| |||||| Sbjct: 1617 taatcggaggacatgtatggttaggttccatttgtctatttg 1658
>gb|AY147672.1| Sisyrinchium montanum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 690 bits (348), Expect = 0.0 Identities = 507/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattttgggctggagcaatgaacctctttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccagagaaacccatgtatgaacaagggttgattttacttccgcacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || ||| ||||| |||| || |||||||||||||| Sbjct: 1209 actctaggttggggggtgggcccaggaggggaagttatagacacctttccatactttgtg 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| |||||||| || || ||||||| ||| Sbjct: 1269 tctggagtacttcacttaatttcctccgcagttttaggctttggcggtgtttatcatgcg 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1329 cttctaggacccgagactcttgaagaatcctttccattctttggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1389 agaaataaaatgactacaattttgggtattcacttaattttgttaggtataggggctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1449 cttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctgggggt 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaacaacttgactcttagcccaggtgttatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||| |||||||||||||| || || |||||||||||| Sbjct: 1569 ctaaaatctccttttggaggagaaggatggattgttagtgtggacgacttagaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 1629 attgggggacatgtatggttaggtt 1653
>gb|AY147650.1| Hydrothrix gardneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 690 bits (348), Expect = 0.0 Identities = 517/577 (89%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1077 cttggagctcacgttgcccatgccggattaatcgtattctgggctggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||||||||||||||||||||| ||| | ||| |||| || ||| Sbjct: 1197 ccgcacctagctactctaggttggggagtaggtccagggggagaggttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| ||||||||| ||||||| || ||||||||||||||||| ||| Sbjct: 1257 ccttactttgtatctggagtacttcacttaatttcttctgcagtcttaggcttcggaggc 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1317 atttatcatgcgcttcttggacctgaaactcttgaagaatcttttccattctttggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactaccattttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||| Sbjct: 1437 ttaggtgcttttcttctagtattcaaggctctttattttgggggtatatatgatacttgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||||||||| ||||||||||||||| | || || ||| | ||| Sbjct: 1497 gctcccgggggtggagatgtaagaaagattaccaatttgaccttgagcccaagtatcata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatattattgggggacatgtatggttaggtt 1653
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 688 bits (347), Expect = 0.0 Identities = 518/580 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37272 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 37331 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| |||||||||||||||||||| || ||||||||||| ||| ||||| Sbjct: 37332 catttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccacctagct 37391 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 37392 actctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttgta 37451 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| || ||||| || || |||||||| || Sbjct: 37452 tctggagtacttcacttaatttcctccgcagtattgggctttggcggtatttatcatgca 37511 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 37512 cttctgggacctgagactcttgaagaatcttttccatttttcggttatgtatggaaagat 37571 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 37572 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctttt 37631 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 37632 cttctagtattcaaggctctttattttggcggcgtatatgatacctgggctcccggaggg 37691 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 37692 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 37751 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 37752 ctaaaatcgccctttggaggagaaggatggattgttagtgtggacgatttggaagatata 37811 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| |||||||||||||| |||| |||||| |||||| Sbjct: 37812 attggaggacatgtatggttaggttccatttgtatatttg 37851
>gb|AY147675.1| Allium textile photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 686 bits (346), Expect = 0.0 Identities = 508/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| |||| || ||||| |||| |||||||||||||||| Sbjct: 1207 ctactctaggttgggggataggtccggggggggaagttatagacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||| ||||| || || |||||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctcggcagtcttgggctttggcggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattctttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||| ||||| ||||||||||||||||||| ||| |||||||||||||||| || Sbjct: 1447 ttcttttagtattcaaggctctttattttggaggtatatatgatacctgggcacccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 1507 ggggggatgtaagaaaaattaccaatttgacacttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| |||||||| ||||||||||||||||||||||| || |||||||| |||| Sbjct: 1567 tactaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaggata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147659.1| Asphodelus albus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 686 bits (346), Expect = 0.0 Identities = 514/575 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggcgcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactttaggttggggggtaggtccggggggagaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| || ||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcatttaatttcctctgctgtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactgaaggctctttattttgggggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| Sbjct: 1507 gaggagatgtaagaaaaattagcaacctgacccttagcccaagtgttatttttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtagacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| ||||| |||||||| |||| ||||||| Sbjct: 1627 taattggaggacacgtatggttaggttctatttgt 1661
>gb|AF528938.1| Saruma henryi photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 684 bits (345), Expect = 0.0 Identities = 519/582 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggactaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||||| || || |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ggcatttcgtaccagagaaacctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||||||||| ||| ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggagtaggtccaggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 |||| || |||||||||||||| |||| |||||| |||||| Sbjct: 1627 taatcggaggacatgtatggttaggttccatttgtctatttg 1668
>gb|AY147651.1| Mayaca fluviatilis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 682 bits (344), Expect = 0.0 Identities = 516/577 (89%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1077 cttggagctcacgtagcccatgcaggattaatcgtattctgggccggagcaatgaatttg 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||| ||||| |||||||||||||| || || |||||||||||||| || ||||||||| Sbjct: 1137 tttgaggtggctcatttcgtaccagagaaacctatgtatgaacaaggattaattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||| |||||||| |||||||||||||||| || ||||| |||| |||||| Sbjct: 1197 ccacacctagctactttaggttggggagtaggtccgggcggagaagttatagacactttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||||||||| ||||||||| ||||||| || |||||||||||||| || || Sbjct: 1257 ccctactttgtatctggagtacttcacttaatttcttctgcagtcttaggctttggaggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1317 atttatcatgcgcttctaggaccggagactcttgaagaatcttttccattctttggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||| |||||||||||||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 1437 ctaggcgcttttcttctagtactcaaagctctttattttggtggcatatatgatacttgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| ||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 1497 gccccgggaggaggagatgtaagaaaaattaccaatttgactcttagccctagtgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1557 tttggctatttactaaaatctccttttgggggagaagggtggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| || ||||||||||| |||| Sbjct: 1617 ttagaagatataattggggggcatgtatggttaggtt 1653
>gb|AF528937.1| Ribes aureum photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 682 bits (344), Expect = 0.0 Identities = 506/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| |||||||||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||| || ||||| |||| || ||||| ||||||||| Sbjct: 1209 actctaggttgggggataggtcctggtggggaagttatagacacctttccctactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtattgggctttgggggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1389 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||||||||||||||| ||| |||||||||||||||| || Sbjct: 1449 cttctagtactcaaggctctttattttggaggtatatatgatacctgggctcccggggga 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 1569 ctaaaatctccctttgggggagaggggtggattgttagtgtggatgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||| ||||| |||| Sbjct: 1629 attggaggacatgtttggttaggtt 1653
>gb|AF528920.1| Aristolochia macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 682 bits (344), Expect = 0.0 Identities = 516/577 (89%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || || |||||||||||||||||||||||||| || ||||| |||| || ||| Sbjct: 1197 ccccatttagctactctaggttggggagtaggtccgggtggggaagttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctccgcagtcctaggctttggtggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||| | ||||| || |||||||||||||| ||||||||||| |||||| Sbjct: 1317 atttatcatgcacttatcggacctgatactcttgaagaatcctttccattcttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgaccacaattttgggtattcacttaatcttgttaggc 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1437 gtgggtgcttttcttctagtactcaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||||||||||||||| ||||||||||| || ||| ||||| Sbjct: 1497 gcccctgggggtggagatgtaagaaaaattaccaacttgacccttagcccaagtattata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttgctaaaatccccctttggaggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||||||||| |||| Sbjct: 1617 ttagaagatataattggaggacatgtatggttaggtt 1653
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 682 bits (344), Expect = 0.0 Identities = 506/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37160 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 37219 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 37220 cattttgtaccagaaaagcccatgtatgaacaaggattaattttacttccccacttagct 37279 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || |||||||| |||||| Sbjct: 37280 actctaggttggggggtaggtccgggtggggaagttatagacacctttccatattttgta 37339 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| |||||||| || || |||||||| || Sbjct: 37340 tctggagtacttcacttaatttcgtctgcagtattaggctttggcggtatttatcatgca 37399 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 37400 cttctgggccctgagactcttgaagaatcttttccattctttggttatgtatggaaagat 37459 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 37460 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctttt 37519 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 37520 cttctagtattcaaggctctttattttggaggcgtatatgatacctgggctccgggaggg 37579 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 37580 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 37639 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 37640 ctaaaatctccttttggaggagaaggatggattgttagtgtggacgatttggaagatata 37699 Query: 567 attggtggacatgtatggttgggtt 591 ||||| || ||||||||||| |||| Sbjct: 37700 attggagggcatgtatggttaggtt 37724
>gb|AY705198.1| Cleistes divaricata PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 676 bits (341), Expect = 0.0 Identities = 518/582 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 408 ctcattttgtaccagagaaacccatgtatgaacaaggattgattttacttccacacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||| || ||| ||||| | ||||||||||||||||||| Sbjct: 468 ctactctagggtggggagtcggtccagggggagaagttatcgatacttttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||||||||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 528 tatctggcgtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| || |||||||| || ||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatccttgccattcttcggatatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 648 atcgaaataaaatgactacaatcttgggtattcacttaattttattaggtctaggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| ||||| |||||||| || ||||||||||| ||||| || Sbjct: 708 ttcttctagtactcaaagctctgtattttggaggcgtatatgatacttgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||| |||| ||||||||||| ||||| || ||||||||||||| Sbjct: 768 ggggagatgtaagaaaaattgccaacttgacccttagccccagcgtgatatttggttatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 828 tactaaaatctccttttgggggagaaggatggattgttagtgtggatgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtctggttaggttccatttgtatatttg 929
>gb|AY147673.1| Xanthorrhoea resinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 674 bits (340), Expect = 0.0 Identities = 501/562 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccggagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||| ||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctaccctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1387 atagaaataaaatgantacaattttgggtattcacttaattttgttaggtataggtgntt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 || || ||||| |||||||| |||||||||| || |||||||||||||||||||| Sbjct: 1447 ttnttntagtantcaaggctntttattttgggggngtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 gaggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 || ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tattaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggtt 586 ||||||| |||||||||||||| Sbjct: 1627 taattggaggacatgtatggtt 1648
>gb|AY147665.1| Cypripedium passerinum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacttag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || | ||| | || || ||||||||||||| Sbjct: 1207 ctactctagggtggggagtaggtccggggggagaggttatcgacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacctaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 1447 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacctggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || || |||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatctttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 1627 taattggaggacatgtctggttaggtt 1653
>gb|AY147655.1| Talbotia elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || |||||||| |||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtacgaacaaggattgattttacttccccacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| || || ||| ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggttggtccaggaggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggttttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttgggcctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| | ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtatttaaggccctttactttgggggggtatatgatacctgggccccagggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || | ||||| |||||||||| Sbjct: 1507 gaggagatgtaagaaaaattaccaacttgacccttagcccgggcgttatttttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY147647.1| Cartonema philydroides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 514/577 (89%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttactt 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| |||||||| |||||||||| |||| || ||||| |||| || ||| Sbjct: 1197 ccgcacctagctactttaggttgggggataggtcctgggggggaagttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || Sbjct: 1257 ccatactttgtatctggggtacttcacctaatttcctccgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| || || |||||||||||||||||||||||||| || |||||| Sbjct: 1317 atttatcatgcgcttcttgggcctgagactcttgaagaatcttttccatttttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaataaaatgactaccattttaggtattcacttaattttgttaggn 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 | ||||||||| || ||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1437 atcggtgcttttnttttagtactcaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||||||| |||||||| || ||||||||||| || ||||| ||| Sbjct: 1497 gcccctggagggggagatgtaaggaaaattactaacttgacccttagcccaagtgtcata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1557 tttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 |||||||||||||| || |||||||||||||| |||| Sbjct: 1617 ttagaagatataatcggcggacatgtatggttaggtt 1653
>gb|AY147642.1| Narthecium ossifragum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 517/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| || ||||||||||| ||||||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattaattttacttccccacttag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccggggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggatttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct: 1387 ataggaataaaatgactacaattttaggtattcacttaattttgttaggtataggtgcct 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttggaggcgtatacgatacctgggccccggggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||| |||||||||||| ||||||||||| || || || || |||||||||| Sbjct: 1507 ggggagatgtaanaaaaattaccaacttgacccttagcccaagcgtgatttttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatccccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1627 taattggaggacatgtatggttaggttccatttgtatatttg 1668
>gb|AF528928.1| Houttuynia cordata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| || ||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattaattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| |||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagttttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctaggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||| | Sbjct: 1387 atagaaataaaatgaccactattttaggtattcacttaattttgttaggtataggtgcat 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| |||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1447 ttcttctagtattcaaagctctttattttggaggcgtatatgacacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1567 tactaaaatctccgtttgggggagaaggttggattgttagtgtagacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattgggggacatgtatggttaggtt 1653
>gb|AF528927.1| Euptelea polyandra photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagcccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatt 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacccgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggcattcacttaatattgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| ||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactcaaatcgccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 37525 acgtggcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtgg 37584 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 37585 ctcatttcgtaccagagaagcctatgtatgaacaaggattgattttacttccccatctag 37644 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 37645 ctactctaggttggggggtaggtcctggtggggaagttgtagacacctttccatactttg 37704 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||||||||||||| ||||||| || || |||||||| | Sbjct: 37705 tatctggagtacttcacttaatttcctccgcagtcctaggctttggcggtatttatcatg 37764 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 37765 cgcttcttggacccgagactcttgaggaatcctttccattcttcggttatgtatggaaag 37824 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 37825 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtctaggcgctt 37884 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 37885 ttcttctagtgttcaaggctctttattttgggggcgtatatgatacctgggcccctggcg 37944 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| ||||||||| ||||||||||| || ||| ||||||||||||||| Sbjct: 37945 gtggagatgtaagaagaattaccaacttgacccttagcccaagtattatatttggttatt 38004 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 38005 tactaaagtctccctttgggggagaaggctggattgttagtgtggacgatttagaagata 38064 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 38065 taattggaggacatgtatggttaggtt 38091
>gb|AF188854.1|AF188854 Nymphaea odorata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1087 acgtggcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaagttgtagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||||||||||||| ||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctccgcagtcctaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttcttggacccgagactcttgaggaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtctaggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtgttcaaggctctttattttgggggcgtatatgatacctgggcccctggcg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| ||||||||| ||||||||||| || ||| ||||||||||||||| Sbjct: 1507 gtggagatgtaagaagaattaccaacttgacccttagcccaagtattatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaagtctccctttgggggagaaggctggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF123817.1|AF123817 Ceratophyllum demersum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2061 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1084 acgtagcccatgccggattaatcgtattttgggccggagcaatgaacctctttgaagtgg 1143 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||| Sbjct: 1144 ctcatttcgtaccagaaaagcccatgtatgaacaaggattaattttacttccccacctag 1203 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 1204 ctactctaggttggggagtaggtccgggtggagaagttatagacacctttccatactttg 1263 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 1264 tatctggagtacttcacttaatttcttctgcagtcttaggctttggtggtatttatcatg 1323 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| |||||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 1324 cacttcttggacctgagactcttgaagagtcctttccattcttcggttatgtatggaaag 1383 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 1384 atagaaataaaatgaccaccattttgggtattcacttaatcttgttaggtctaggtgctt 1443 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||| ||||| | || |||||||||||||| |||||||||||||| ||||| ||| Sbjct: 1444 ttcttttagtatttaaagctctttattttgggggtgtatatgatacttgggctcctgggg 1503 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 1504 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgtgatatttggttatt 1563 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 1564 tactaaaatctccctttgggggcgaagggtggattgttagtgtggacgatttagaagata 1623 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1624 taattggaggacatgtatggttaggtt 1650
>gb|AF239785.1| Magnolia stellata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggcccgggtggggaagttgtagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| |||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagttttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggccctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaaagctctttattttgggggcgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 670 bits (338), Expect = 0.0 Identities = 506/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 35593 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 35652 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 35653 ctcatttcgtaccagagaagcccatgtatgaacaaggattgattttacttccacacttag 35712 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| | || || ||||||||||||| Sbjct: 35713 ctactctagggtggggagtaggtccggggggagaagttatcgacacctttccatactttg 35772 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||| ||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 35773 tatctggagtactccacttaatttcctctgcagtcttaggctttggcggtatttatcatg 35832 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 35833 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 35892 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 35893 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 35952 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| |||||||| |||||||| || ||||||||||||||||| || Sbjct: 35953 ttcttctagtacttaaggctctgtattttggaggcgtatatgatacctgggcacccggag 36012 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || ||||| |||||||||| Sbjct: 36013 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatttttggttatt 36072 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 36073 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 36132 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 36133 taattggaggacatgtttggttaggtt 36159
>gb|AF528936.1| Platanus occidentalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 664 bits (335), Expect = 0.0 Identities = 505/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| |||||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaagttatagacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || |||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcgggcctgagactctggaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || |||||||||||||| |||||||||||||| || |||||| |||||| Sbjct: 1567 tactaaaatccccctttgggggagaaggatggattgttagtgtggacgatttanaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF123819.1|AF123819 Dioscorea bulbifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2158 Score = 662 bits (334), Expect = 0.0 Identities = 511/575 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1071 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaggtgg 1130 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || |||||||||||||| || |||||||||||||| ||| ||| Sbjct: 1131 ctcatttcgtaccagagaaacccatgtatgaacagggattgattttacttccccacctag 1190 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||||| |||||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1191 ctactctgggttggggggtaggtccggggggggaagttatagacacctttccctactttg 1250 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||| ||||| ||||||||||| || || |||||||| | Sbjct: 1251 tatctggagtacttcacttaatttcttccgcggtcttaggctttgggggtatttatcatg 1310 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1311 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1370 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1371 atagaaataaaatgactacaattttaggtattcacttaattttgttaggtataggtgctt 1430 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1431 ttcttctagtactcaaggctctttattttggtggtgtatacgatacttgggccccagggg 1490 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || |||||||||||||||| Sbjct: 1491 gaggagatgtaagaaaaattaccaacttgacccttagcccaagcgttatatttggttatt 1550 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1551 tactaaaatccccttttgggggagaaggttggattgttagtgtggacgatttagaagata 1610 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 |||| || || ||||||||||| |||| ||||||| Sbjct: 1611 taatgggggggcatgtatggttaggttctatttgt 1645
>gb|AF239778.1| Chloranthus japonicus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 662 bits (334), Expect = 0.0 Identities = 505/567 (89%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagccgatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccaccattttgggtattcacttaatcttgttagggataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttggaggcgtatatgatacctgggcccccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| || |||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaactttacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 cactaaaatcaccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 1627 taattggaggacatgtctggttaggtt 1653
>gb|AY147667.1| Iris missouriensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 660 bits (333), Expect = 0.0 Identities = 498/559 (89%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1095 catgccggattaatcgtattctgggccggagcaatgaacctctttgaagtggctcatttc 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 |||||||| || || |||||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 1155 gtaccagagaaacctatgtatgaacaaggattgattttacttccgcacctanctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 |||||||| ||||| || ||||| ||||||| |||||||||||||||| ||| Sbjct: 1215 ggttggggggtaggtccgggaggggaagttatagatacctttccatactttgtatntgga 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| |||||||||| |||||||||||||| || || |||||||| |||||||| Sbjct: 1275 gtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatgcgcttcta 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1335 ggacctgagactcttgaggaatcctttccattctttggttatgtatggaaagatagaaat 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 ||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1395 aaaatgactacnattttaggtattcacttaattttgttaggtataggtgcctttcttcta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 ||| ||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 1455 gtattcaaggctctttattttgggggtgtatatgatacctgggcccccgggggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 ||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1515 gtaagaaaaattaacaacttgacccttagcccaagtgttatatttggttatttactaaaa 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 || || ||||| |||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 1575 tccccctttggaggagaaggatggattgttagtgtggacgatttagaagatataattgga 1634 Query: 573 ggacatgtatggttgggtt 591 |||||||||||||| |||| Sbjct: 1635 ggacatgtatggttaggtt 1653
>gb|AY147645.1| Zigadenus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 658 bits (332), Expect = 0.0 Identities = 524/592 (88%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1077 cttggagctcacgtagcccatgccggattaattgtattctgggccggagcaatgaaccta 1136 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||||||||| || |||||||| Sbjct: 1137 tttgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattaattttactc 1196 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||| ||||||||||||||||||| ||||| || ||||| |||| || ||| Sbjct: 1197 ccccacctagctactctaggttggggggtaggtccggggggggaagttatagacaccttt 1256 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || || Sbjct: 1257 ccatactttgtatctggagtacttcacttaatttcctccgcagtcttaggctttggcggt 1316 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||||| ||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 1317 atttatcatgcgcttctcggacctgagactcttgaagaatcctttccttttttcggttat 1376 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1377 gtatggaaagatagaaatnaaatgactacaattttaggtattcacttaattttgttaggt 1436 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 1437 ataggtgcttttcttctagtacttaaggctctttattttgggggcgtatatgatacctgg 1496 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 |||||| ||||| |||||||| ||||| ||||||||||| || | |||||| Sbjct: 1497 gcccctggggggggggatgtcagaaaaataaccaacttgacccttagcccgggcgttata 1556 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| ||||||||||| || || ||| Sbjct: 1557 tttggttatttactaaaatccccttttgggggagaaggatggattgttagcgtggacgat 1616 Query: 555 ttagaagatataattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||||||||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1617 ttagaagatataattgggggacatgtatggttaggttccatttgtatatttg 1668
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 658 bits (332), Expect = 0.0 Identities = 503/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35393 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 35452 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 35453 catttcgtaccagagaagcctatgtatgaacaaggattgattttacttccccacctagct 35512 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35513 actctaggttggggggtaggccctgggggagaagttatagacacctttccatactttgta 35572 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35573 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35632 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35633 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35692 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35693 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35752 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| |||||||||||||||||||| || Sbjct: 35753 cttctagtattcaaggctctttattttgggggtgtatatgatacctgggctccaggaggg 35812 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35813 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35872 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 35873 ctaaaatccccttttggaggggaaggctggattgttagtgtagacgatttagaagatata 35932 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 35933 attggaggacatgtatggttaggtt 35957
>gb|AF123818.1|AF123818 Cercidiphyllum japonicum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2157 Score = 658 bits (332), Expect = 0.0 Identities = 503/565 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 gtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1146 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| |||||||||||||||||||| || ||||||||||| ||| |||| Sbjct: 1147 catttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccacctagcg 1206 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1207 actctaggttggggggtaggtcccggtggggaagttatagacacctttccatactttgta 1266 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1267 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1326 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1327 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1386 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1387 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctttt 1446 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1447 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccgggggg 1506 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1507 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 1566 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1567 ctaaaatcgccctttggaggcgaaggatggattgttagtgtggatgatttggaagatata 1626 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 1627 attggaggacatgtatggttaggtt 1651
>gb|AF239783.1| Lilium superbum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2178 Score = 658 bits (332), Expect = 0.0 Identities = 512/577 (88%) Strand = Plus / Plus Query: 30 gcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccat 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1086 gcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggctcat 1145 Query: 90 ttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctact 149 || |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||||| Sbjct: 1146 tttgtaccagagaaacccatgtatgaacaaggattgattttacttccccacctagctact 1205 Query: 150 ctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatct 209 ||||||||||| || || || ||||| |||| || ||||||||||||||||| Sbjct: 1206 ctaggttggggggtgggtccggggggggaagttatagacacctttccatactttgtatcc 1265 Query: 210 ggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgctt 269 || ||||||||| ||||||| || |||||||||||||| || || |||||||| |||||| Sbjct: 1266 ggagtacttcacttaatttcttctgcagtcttaggctttggcggtatttatcatgcgctt 1325 Query: 270 ctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagataga 329 || ||||| ||||||||||||||||| ||||||||||| |||||| | |||||||||||| Sbjct: 1326 cttggacctgagactcttgaagaatcctttccattcttcggttatatatggaaagataga 1385 Query: 330 aataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttctt 389 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1386 aataaaatgactacaattttgggtattcacttaattttgttaggtataggtgcttttctt 1445 Query: 390 ctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnna 449 || ||||| ||||||||||||||||| || ||||||||||||||||||||| | Sbjct: 1446 ctggtacttaaggctctttattttgggggcgtatatgatacctgggcccctgggggggga 1505 Query: 450 gatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttacta 509 |||||||||||||||||||| ||||||||||| || || |||||||||||||||||||| Sbjct: 1506 gatgtaagaaaaattaccaacttgacccttagcccaagcattatatttggttatttacta 1565 Query: 510 aaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataatt 569 |||||||||||||| || ||||| |||||||||||||| || ||||||||||||||||| Sbjct: 1566 aaatctccttttggcggggaaggatggattgttagtgtggacaatttagaagatataatt 1625 Query: 570 ggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| ||||||||||| |||| |||||| |||||| Sbjct: 1626 ggtgggcatgtatggttaggttccatttgtatatttg 1662
>gb|AY147652.1| Palisota bogneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 654 bits (330), Expect = 0.0 Identities = 504/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgttttctgggcaggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || | ||| | || || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggccctggaggggaggttatcgacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggggtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| || || |||||||||||||||||||||||||| || |||||||| ||||||| Sbjct: 1327 cgcttcttgggcctgagactcttgaagaatcttttccatttttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactaccattttaggtattcacctaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggcccctggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||| || ||||||||||| || ||| ||||||||||||||| Sbjct: 1507 ggggggatgtaagaaaaattactaacttgacccttagcccaagtattatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagcgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||| ||||||| |||| Sbjct: 1627 taattggaggacatatatggttaggtt 1653
>gb|AF528931.1| Nelumbo lutea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 654 bits (330), Expect = 0.0 Identities = 504/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtcgcccatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || | | Sbjct: 1147 ctcatttcgtaccagagaagcccatgtatgaacaaggattgattttacttccccatctcg 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactttaggttggggggtaggtcctggtggagaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| || ||||| ||||| |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtattgggctttggtggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcatttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggccccggggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaataaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || ||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatcgccctttggaggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF123825.1|AF123825 Liriodendron tulipifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 654 bits (330), Expect = 0.0 Identities = 504/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1141 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| || ||||||||||| || ||| Sbjct: 1142 ctcatttcgtaccagagaaacccatgtatgaacaaggattaattttacttccccatctag 1201 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || |||||||| |||| Sbjct: 1202 ctactctaggttggggggtaggtccgggtggggaagttgtagacacctttccatattttg 1261 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| |||||||| || || |||||||| | Sbjct: 1262 tatctggagtacttcacttaatttcctctgcagttttaggctttggcggtatttatcatg 1321 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1322 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1381 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||| Sbjct: 1382 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggcgctt 1441 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||| || ||||||||||||||||| || Sbjct: 1442 ttcttctagtactcaaagctctttattttgggggcgtatatgatacctgggctcccgggg 1501 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1502 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1561 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1562 tactaaaatcgccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1621 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1622 taattggaggacatgtatggttaggtt 1648
>gb|AY147639.1| Scheuchzeria palustris photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 652 bits (329), Expect = 0.0 Identities = 515/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||||| Sbjct: 1087 acgtagcccatgccggattaattgtattttgggccggagctatgaacttatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||| |||||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1147 cccattttgtaccagagaagcccatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||||||||| || ||||| |||| || ||||| ||||||| Sbjct: 1207 ctactctaggttggggagtaggtccggggggggaagttatagacacctttccgtactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 | ||||| ||||||||| |||||||||| ||||||||||| || || || |||||||| | Sbjct: 1267 tgtctggagtacttcacttaatttcctcagcagtcttaggttttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| || || ||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1327 cgcttcttgggcctgagactcttgaggaatcttttccattctttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttaggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| | || |||||||||||||| |||||||||||||||||||| || Sbjct: 1447 ttcttctagtatttaaagctctttattttggtggtgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaataaccaacttaacccttagtccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 || ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tattaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| || |||||||||||||||| |||||| |||||| Sbjct: 1627 taattggaggccatgtatggttgggttccatttgtatatttg 1668
>gb|AY705206.1| Pogonia ophioglossoides PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 652 bits (329), Expect = 0.0 Identities = 515/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccacacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||| || ||| ||||| | ||||||||||||||||||| Sbjct: 468 ctactctagggtggggagtcggtccagggggagaagttatcgatacttttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 528 tatctggggtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 648 atcgaaataaaatgactacaatcctgggtattcatttaattttattaggtctaggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||| || |||||||||| ||||| || Sbjct: 708 ttcttctagtactcaaagctctttattttggaggcatatatgatacttgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || ||||||||||||| Sbjct: 768 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatatttggttatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 828 tactaaaatctccttttggaggagaaggatggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtctggttaggttccatttgtatatttg 929
>gb|AY705204.1| Pogonia minor PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 652 bits (329), Expect = 0.0 Identities = 515/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccacacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||| || ||| ||||| | ||||||||||||||||||| Sbjct: 468 ctactctagggtggggagtcggtccagggggagaagttatcgatacttttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 528 tatctggggtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 648 atcgaaataaaatgactacaatcctgggtattcatttaattttattaggtctaggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||| || |||||||||| ||||| || Sbjct: 708 ttcttctagtactcaaagctctttattttggaggcatatatgatacttgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || ||||||||||||| Sbjct: 768 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatatttggttatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 828 tactaaaatctccttttggaggagaaggatggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtctggttaggttccatttgtatatttg 929
>gb|AY147662.1| Coelogyne cristata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 650 bits (328), Expect = 0.0 Identities = 503/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacttag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| | || || ||||||||||||| Sbjct: 1207 ctactctagggtggggagtaggtccggggggagaagttatcgacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||| ||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtactccacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttntaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacnattttgggtattcacttaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 1447 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || || |||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatctttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 1627 taattggaggacatgtttggttaggtt 1653
>gb|AF134324.1|AF134324 Populus deltoides Qa-binding protein PsbD (psbD) and chlorophyll a-binding protein PsbC (psbC) genes, chloroplast genes encoding chloroplast proteins, complete cds Length = 2545 Score = 650 bits (328), Expect = 0.0 Identities = 502/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1240 gtagctcatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 1299 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 1300 catttcgtacccgagaagccaatgtatgaacaaggattgattttacttccccacctagct 1359 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || ||||| |||| || |||||||||||||| Sbjct: 1360 actctaggttggggggtgggtcctgggggagaagttatagacacctttccatactttgtc 1419 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1420 tctggagtacttcacttaatttcctctgcagtcttgggctttggcggtatttatcatgca 1479 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1480 cttctaggacccgagactcttgaagaatcttttccattttttggttatgtatggaaagat 1539 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||| ||||| ||||||||||| Sbjct: 1540 agaaataaaatgacaacaattttaggtattcacttaatcttgctaggtataggtgctttt 1599 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||| |||||||||||||| || ||||||||||||||||| || Sbjct: 1600 cttctagtattcaaagctctttattttgggggcgtatatgatacctgggctccggggggg 1659 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 1660 ggagatgtaagaaaaattaccaacttgaccctgagtccaagtgttatatttggttattta 1719 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 1720 ctaaaatctccttttggaggagaaggatggactgttagtgtagatgatttggaagatata 1779 Query: 567 attggtggacatgtatggttgggtt 591 |||||||| ||||||||||| |||| Sbjct: 1780 attggtgggcatgtatggttaggtt 1804
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 650 bits (328), Expect = 0.0 Identities = 502/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34753 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 34812 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 34813 catttcgtacccgagaagcctatgtatgaacaaggattgattttacttccccacctagct 34872 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| ||||||| ||||||||||||||| Sbjct: 34873 actctaggttggggggtaggccctgggggagaagttatagatacctttccatactttgta 34932 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 34933 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 34992 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 34993 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35052 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35053 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35112 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35113 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 35172 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35173 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35232 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 35233 ctaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaagatata 35292 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 35293 atcggaggacatgtatggttaggtt 35317
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 650 bits (328), Expect = 0.0 Identities = 502/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34750 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 34809 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 34810 catttcgtacccgagaagcctatgtatgaacaaggattgattttacttccccacctagct 34869 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| ||||||| ||||||||||||||| Sbjct: 34870 actctaggttggggggtaggccctgggggagaagttatagatacctttccatactttgta 34929 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 34930 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 34989 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 34990 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35049 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35050 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35109 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35110 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 35169 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35170 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35229 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 35230 ctaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaagatata 35289 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 35290 atcggaggacatgtatggttaggtt 35314
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 650 bits (328), Expect = 0.0 Identities = 502/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34778 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 34837 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 34838 catttcgtacccgagaagcctatgtatgaacaaggattgattttacttccccacctagct 34897 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 34898 actctaggttggggggtaggtcctgggggagaagttatagacacctttccatactttgta 34957 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 34958 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35017 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35018 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35077 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35078 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35137 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35138 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 35197 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35198 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35257 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 35258 ctaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaagatata 35317 Query: 567 attggtggacatgtatggttgggtt 591 || || ||||||||||||||||||| Sbjct: 35318 atcggaggacatgtatggttgggtt 35342
>gb|AF239782.1| Hydrastis canadensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2115 Score = 648 bits (327), Expect = 0.0 Identities = 513/580 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1118 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 1119 catttcgtaccggagaagcccatgtatgaacaaggattgattttacttccccacctagct 1178 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||| ||||||||| Sbjct: 1179 actctaggttggggggtaggtcctggtggggaagttatagacacctttccgtactttgta 1238 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| | Sbjct: 1239 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcattca 1298 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1299 cttctcggacccgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 1358 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1359 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctttt 1418 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||| ||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1419 cttctagtacttaaggctctttattttgggggagtatatgatacctgggctcctgggggt 1478 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| || || ||||| || ||||||||||||||||||||| Sbjct: 1479 ggagatgtaagaaaaataaccaacttaacacttagcccaagtgttatatttggttattta 1538 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1539 ctaaaatccccctttggaggagaagggtggattgttagtgtggacgatttagaagatata 1598 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1599 attggaggacatgtatggttaggttccatttgtatatttg 1638
>gb|AF123823.1|AF123823 Illicium parviflorum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 648 bits (327), Expect = 0.0 Identities = 498/560 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1082 acgtagcccatgccggattaatcgtcttctgggccggagcaatgaacctatttgaagtgg 1141 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1142 ctcatttcgtaccagaaaagcctatgtatgaacaaggattgattttacttccccatctag 1201 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1202 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccgtactttg 1261 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1262 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1321 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1322 cacttctcgggcctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1381 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1382 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1441 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1442 ttctcctagtgctcaaggctctttattttggaggcgtatatgatacctgggctcctgggg 1501 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| |||||| || ||||||||||| || ||||||||||||||||||| Sbjct: 1502 ggggagatgtaagaagaattactaacttgacccttagcccaagtgttatatttggttatt 1561 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1562 tactaaaatccccctttgggggagaaggctggattgttagtgtggacgatttagaagata 1621 Query: 565 taattggtggacatgtatgg 584 ||||||| |||||||||||| Sbjct: 1622 taattggaggacatgtatgg 1641
>gb|AY147640.1| Tofieldia glutinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 646 bits (326), Expect = 0.0 Identities = 503/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatagtattctgggctggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagcccatgtatgaacaaggatttattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||||||||| ||| ||||| |||| || ||||| || |||| Sbjct: 1207 ctactctaggttggggagtaggtccagggggggaagttatagacacctttccctattttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 | ||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||| | Sbjct: 1267 tgtctggagtacttcacttaatttcctctgcagtcttaggctttggtggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttctcggacctgatactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| || |||||||||| ||||| || Sbjct: 1447 ttcttctagtattcaaggctctttattttgggggcatatatgatacttgggctcccggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||||||||||||||| || || |||| |||||||||| Sbjct: 1507 gaggagatgtaagaaaaattaccaatttgacccttagcccaagcattatttttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccctttggaggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AY705189.1| Eriaxis rigida PsbC (psbC) gene, partial cds; chloroplast Length = 1400 Score = 646 bits (326), Expect = 0.0 Identities = 503/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 335 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgt 394 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 395 ctcatttcgtaccagaaaaacccatgtatgaacaaggattgattttacttccgcacttag 454 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| | || || ||||||||||||| Sbjct: 455 ctactctagggtggggagtaggtccggggggagaagttatcgacacctttccatactttg 514 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 515 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 574 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 575 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 634 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 635 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 694 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 695 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccggag 754 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || || || ||||||||||||| Sbjct: 755 ggggagatgtcagaaaaattaccaacttgacccttagcccaagcgtgatatttggttatt 814 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 815 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 874 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| || ||||| ||||| |||| Sbjct: 875 taattggagggcatgtttggttaggtt 901
>gb|AF239776.1| Ascarina lucida photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 646 bits (326), Expect = 0.0 Identities = 503/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| ||||| ||||||||||| || |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagagaagccgatgtatgaacagggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || | ||| |||| || |||||||| |||| Sbjct: 1207 ctactctaggttggggggtaggtcctggtggggaggttatagacacctttccatattttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccaccattttgggtattcacttaatcttgttagggataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggccccggggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||| || |||||||| ||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 cactaaaatcgccctttgggggggaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF528921.1| Mahonia aquifolium photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 644 bits (325), Expect = 0.0 Identities = 514/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||||||||||||||||||||||||||| ||||||||||| || || ||| Sbjct: 1147 ctcatttcgtaccagaaaagcccatgtatgaacaaggattgattttactgccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||| ||||||||||| ||||| || ||||| |||| || |||||||| |||| Sbjct: 1207 ctaccctaggttggggggtaggtcctggtggggaagttatagacacctttccatattttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||||||||| |||||||| || || |||||||| Sbjct: 1267 tatctggagtacttcacttaatttcctccgcagtattaggctttggcggtatttatcatt 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||||||||| || ||||||||||||||||||||||| || |||||||| ||||||| Sbjct: 1327 cacttctgggacctgaaactcttgaagaatcttttccatttttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||| ||||| || |||||||||||||||||||| || |||||| ||||||||| Sbjct: 1387 atagaaataagatgaccaccattttgggtattcacttaatcttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1447 ttcttctagtactcaaggctctttattttgggggcgtatatgatacctgggctcctggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1507 gaggagatgtaagaaaaataaccaacttgacacttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || ||||| ||||||||||||||||||||||| || ||||| ||||||| Sbjct: 1567 tactaaaatccccatttggaggagaagggtggattgttagtgtggacgatttggaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1627 taattggaggacatgtatggttaggttccatttgtatatttg 1668
>gb|DQ069646.1| Ranunculus macranthus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 644 bits (325), Expect = 0.0 Identities = 514/582 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct: 158 acgtagcccatgctggattaattgtattctgggcaggagcaatgaacctgtttgaagtgg 217 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 218 cgcatttcgtacccgagaagcccatgtatgaacaaggattgattttacttccccacttag 277 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||||||||||||||| |||| || ||||| |||| |||||||||||||||| Sbjct: 278 ctactctaggttggggaataggccctgggggggaagttatagacacttttccatactttg 337 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| ||||| ||||||||||| || |||||||| Sbjct: 338 tatctggagtacttcacttaatttcctctgcagtattaggcttcggcggtatttatcatt 397 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || ||||| |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 398 cacttctcgggcccgaaactcttgaagaatcttttccattcttcggttatgtatggaaag 457 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 458 atagaaataaaatgaccacaattttggggattcacttaatcttgttaggtataggtgctt 517 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 518 ttctgttagtactcaaggctctttattttgggggagtatatgatacctgggctcctgggg 577 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||| |||| ||||| ||||| || ||| ||||||||||||||| Sbjct: 578 ggggagatgtaagaaaaatttccaacttgacacttagcccaagtattatatttggttatt 637 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| ||||| || |||||||||||||| || ||||||||||||| Sbjct: 638 tactaaaatctccttttggaggagagggttggattgttagtgtggacgatttagaagata 697 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||||||||| |||| |||||| |||||| Sbjct: 698 taattggaggacatgtatggttaggttccatttgtatatttg 739
>gb|AF528930.1| Hydrangea macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 642 bits (324), Expect = 0.0 Identities = 501/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||| ||| Sbjct: 1389 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgccttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||||||||||| || || |||||||||| ||||| || Sbjct: 1449 cttctagtattcaaggctctttatttcgggggcatatatgatacttgggctcccggaggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgacccttagtccaagtattatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1569 ctaaaatctccttttgggggagaaggctggattgttagtgtggacgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 1629 atcggaggacatgtatggttaggtt 1653
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 642 bits (324), Expect = 0.0 Identities = 501/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34895 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 34954 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 34955 catttcgtacccgagaagcctatgtatgaacaaggattgattttacttccccacctagct 35014 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35015 actctaggttggggggtaggtcctgggggagaagttatagacacctttccatactttgta 35074 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35075 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35134 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35135 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35194 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35195 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35254 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35255 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 35314 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35315 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35374 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 35375 ctaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaagatata 35434 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 35435 atcggaggacatgtatggttaggtt 35459
>gb|AF123824.1|AF123824 Lactoris fernandeziana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 642 bits (324), Expect = 0.0 Identities = 511/577 (88%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cttggagctcacgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 1132 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||||||||| Sbjct: 1133 tttgaagtggctcatttcgtaccagagaaacccatgtatgagcaaggattaattttactt 1192 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || || |||||||||| |||||||||||||| || | ||| |||| || ||| Sbjct: 1193 ccccatctagctactctcggttggggagtaggcccgggtggggaggttatagacaccttt 1252 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| || || Sbjct: 1253 ccatactttgtatctggagtacttcacttaatttcctccgcagtcttgggctttggcggt 1312 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 1313 atttatcatgcacttctcggacctgagactcttgaagaatcctttccattcttcggttat 1372 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1373 gtatggaaagatagaaataaaatgaccaccattttgggtattcacttaatcttgttaggt 1432 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1433 ataggtgcgtttcttctagtactcaaggctctttattttgggggcatatatgatacctgg 1492 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 1493 gctccgggggggggggatgtaagaaaaattaccaacttgacccttagcccaagtgttata 1552 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1553 tttggttatttactaaaatctccctttgggggagaaggatggattgttagtgtggacgat 1612 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||| ||||| |||||| Sbjct: 1613 ttagaagatataattggaggacatatatggctgggtt 1649
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 642 bits (324), Expect = 0.0 Identities = 501/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34899 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 34958 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 34959 catttcgtacccgagaagcctatgtatgaacaaggattgattttacttccccacctagct 35018 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35019 actctaggttggggggtaggtcctgggggagaagttatagacacctttccatactttgta 35078 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35079 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35138 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35139 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35198 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 35199 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 35258 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35259 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 35318 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35319 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 35378 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 35379 ctaaaatccccttttggaggagaagggtggattgttagtgtggacgatttagaagatata 35438 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 35439 atcggaggacatgtatggttaggtt 35463
>gb|AY147670.1| Orchis rotundifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 638 bits (322), Expect = e-180 Identities = 508/575 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgctggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 1147 ctcattttgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacttag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| ||| ||||| | || || ||||||||||||| Sbjct: 1207 ctactctagggtggggagtaggtccagggggagaagttatcgacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||| | ||||| || ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 1327 cgcttttaggacctgaaactcttgaagagtcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 1447 ttcttctagtactcaaggctctttattttggaggcgtatatgatacttgggcacccggag 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| |||||||||| || || || ||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttgacccttaacccaagcgtgatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 || ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tattaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||||| ||||| || | ||||||| Sbjct: 1627 taattggaggacatgtctggttaggctctatttgt 1661
>gb|AF239777.1| Austrobaileya scandens photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 636 bits (321), Expect = e-179 Identities = 498/562 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtggcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 cccatttcgtaccagaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||| ||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttgggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcgggcctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1447 ttctcctagtgctcaaggctctttattttgggggcgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| ||||| || |||||||| || || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaagaattagtaacttgaccctgagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatccccctttgggggagaaggatggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggtt 586 ||||||| |||||||||||||| Sbjct: 1627 taattggaggacatgtatggtt 1648
>gb|AF528924.1| Cornus mas photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 634 bits (320), Expect = e-179 Identities = 500/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcacatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1269 tccggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 1389 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || |||||||||||||||| || Sbjct: 1449 cttctagtattcaaggctctttattttgggggcatatatgatacctgggctcccggaggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1569 ctaaaatcgccttttgggggagaaggatggattgttagtgtggacgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 1629 atcgggggacatgtatggttaggtt 1653
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 634 bits (320), Expect = e-179 Identities = 500/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35643 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 35702 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 35703 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 35762 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35763 actctaggttggggggtaggccctgggggagaagttatagacacctttccatactttgta 35822 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35823 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35882 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35883 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35942 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 35943 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtctaggtgctttt 36002 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 36003 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 36062 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 36063 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 36122 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| |||||||||||||| || ||||||||||||||| Sbjct: 36123 ctaaaatccccttttggaggggaaggatggattgttagtgtggacgatttagaagatata 36182 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 36183 atcggaggacatgtatggttaggtt 36207
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 634 bits (320), Expect = e-179 Identities = 500/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 35969 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctattcgaagtggct 36028 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || ||||||||||| |||||||| || ||||||||||| ||| ||||| Sbjct: 36029 catttcgtaccggagaagcccatgtacgaacaaggattaattttacttccccacctagct 36088 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||| |||||||||| ||||| || ||||| |||| || ||||| |||||||| Sbjct: 36089 actttaggttggggggtaggtcctggtggggaagttatagacacctttccttactttgtg 36148 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| || || || || || |||||||| || Sbjct: 36149 tctggagtacttcacttaatttcctccgcagtattgggttttggcggtatttatcatgca 36208 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 36209 cttctgggacccgagacccttgaagaatcttttccattcttcggttatgtgtggaaagat 36268 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 36269 agaaataaaatgactaccattttgggtattcacttaattttgttaggtataggtgctttt 36328 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||| |||||||||||||| || ||||||||||||||||| || Sbjct: 36329 cttctagtattcaaagctctttattttgggggcgtatatgatacctgggctcccgggggg 36388 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 36389 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 36448 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 36449 ctaaaatctccttttggcggagaaggatggattgttagtgtggacgatttggaagatata 36508 Query: 567 attggtggacatgtatggttgggtt 591 |||| |||||||||||||| |||| Sbjct: 36509 gttgggggacatgtatggttaggtt 36533
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 634 bits (320), Expect = e-179 Identities = 500/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35640 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 35699 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 35700 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 35759 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35760 actctaggttggggggtaggccctgggggagaagttatagacacctttccatactttgta 35819 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35820 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35879 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35880 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35939 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 35940 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtctaggtgctttt 35999 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 36000 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggaggg 36059 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 36060 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 36119 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| |||||||||||||| || ||||||||||||||| Sbjct: 36120 ctaaaatccccttttggaggggaaggatggattgttagtgtggacgatttagaagatata 36179 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 36180 atcggaggacatgtatggttaggtt 36204
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 634 bits (320), Expect = e-179 Identities = 500/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35577 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 35636 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 35637 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 35696 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35697 actctaggttggggggtaggccctgggggagaagttatagacacctttccatactttgta 35756 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct: 35757 tctggagtacttcatttaatttcttctgcagtattgggctttggcggcatttatcatgca 35816 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35817 cttctgggacctgagacacttgaagaatcttttcccttctttggttatgtctggaaagat 35876 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 35877 cgaaataaaatgaccacaattttaggtattcacttaatcttgttaggtctaggtgctttt 35936 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 35937 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccgggagga 35996 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| | ||||||||||||||| Sbjct: 35997 ggagatgtaagaaaaattaccaacttgacccttagcccgagtatcatatttggttattta 36056 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| |||||||||||||| || ||||||||||||||| Sbjct: 36057 ctaaaatccccttttggaggggaaggatggattgttagtgtggacgatttagaagatata 36116 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 36117 atcggaggacatgtatggttaggtt 36141
>gb|AY705196.1| Isotria medeoloides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 630 bits (318), Expect = e-177 Identities = 512/582 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccacacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || ||| ||||| | ||||||||||||||||||| Sbjct: 468 ctactctaggatggggggtcggtccagggggagaagttatcgatacttttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||||||||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 528 tatctggcgtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacccgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 648 atcgaaataaaatgactacaatcttgggtattcacttaattttattgggtctaggtgctc 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||| |||||||| || ||||||||| | ||||| || Sbjct: 708 ttcttctagtactcaaatctctgtattttggaggcgtatatgatgcttgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||| ||||||| ||||| ||||| || || || |||||||| |||| Sbjct: 768 ggggagatgtaagaaaanttaccaacttgacgcttagcccaagcgtgatatttggctatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 828 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattgggggacatgtctggttaggttccatttgtatatttg 929
>gb|AY705190.1| Clematepistephium smilacifolium PsbC (psbC) gene, partial cds; chloroplast Length = 1429 Score = 630 bits (318), Expect = e-177 Identities = 501/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 335 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgt 394 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||||||||||||||| || ||||||| Sbjct: 395 ctcatttcgtaccagagaaacccatgtatgaacaagggttgattttactcccgcacttag 454 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| | || || ||||||||||||| Sbjct: 455 ctactctagggtggggagtaggtccggggggagaagttatcgacacctttccatactttg 514 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 515 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 574 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 575 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 634 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 635 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 694 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 695 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccggag 754 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||| ||||| || || || || |||||||||| Sbjct: 755 ggggagatgtcagaaaaattaccaacttgacgcttagcccaagcgtgatctttggttatt 814 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 815 tactaaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 874 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| || ||||| ||||| |||| Sbjct: 875 taattggagggcatgtttggttaggtt 901
>gb|AY705205.1| Pogonia japonica PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 628 bits (317), Expect = e-177 Identities = 512/582 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccacacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||| || ||| ||||| | ||||||||||||||||||| Sbjct: 468 ctactctagggtggggagtcggtccagggggagaagttatcgatacttttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||| ||| |||||||||||||| || || |||||||| | Sbjct: 528 tatctggggtacttcatttaattttctctgcagtcttaggctttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 648 atcgaaataaaatgactacaatcctgggtattcatttaattttattaggtctaggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||||||||||||| || |||||||||| ||||| || Sbjct: 708 ttcttctagtactcaaagctctttattttggaggcatatatgatacttgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || ||||||||||||| Sbjct: 768 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatatttggttatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||| ||||||||||||||| |||||||| || ||||||||||| || ||||||||||||| Sbjct: 828 tacaaaaatctccttttggaggagaaggatgaattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtctggttaggttccatttgtatatttg 929
>gb|AY705197.1| Isotria verticillata PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1436 Score = 628 bits (317), Expect = e-177 Identities = 512/582 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 acgtagctcatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 403 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 404 ctcatttcgtaccagagaaacccatgtatgaacaaggattgatcttacttccacacttag 463 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || ||| ||||| | ||||||||||||||||||| Sbjct: 464 ctactctaggatggggggtcggtccagggggagaagttatcgatacttttccatactttg 523 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||||||||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 524 tatctggcgtacttcatttaatttcctctgcagtcttaggctttggcggtatttatcatg 583 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 584 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 643 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 || ||||||||||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 644 atcgaaataaaatgactacaatcttgggtattcacttaattttattgggtctaggtgctc 703 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||| |||| |||||||| || ||||||||||| ||||| || Sbjct: 704 ttcttctagtactcaaatctctgtattttggaggcgtatatgatacttgggcacccggag 763 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||| ||||| || || || |||||||| |||| Sbjct: 764 ggggagatgtaagaaaaattaccaacttgacgcttagcccaagcgtgatatttggctatt 823 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 824 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttagaagata 883 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 884 taattggaggacatgtctggttaggttccatttgtatatttg 925
>gb|AY741476.1| Camellia sinensis var. assamica cultivar Burma photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741475.1| Camellia sinensis cultivar Shiang Yuan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741474.1| Camellia sinensis var. sinensis cultivar Shy Jin Chuen photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741473.1| Camellia sinensis cultivar Gau Lu photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741472.1| Camellia sinensis var. sinensis cultivar TTES No. 13 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741471.1| Camellia sinensis var. sinensis cultivar Chin Shin Dah Pan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741470.1| Camellia sinensis var. sinensis cultivar Chin Shin Oolong photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741469.1| Camellia sinensis var. sinensis cultivar Bair Mau Hour photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741468.1| Camellia sinensis var. sinensis cultivar Tiee Guan In photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741467.1| Camellia sinensis var. sinensis cultivar TTES No. 12 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AF528929.1| Hernandia peltata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaatctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| || || |||||||||||||| |||||||||||||| || ||||| Sbjct: 1149 catttcgtaccagagaaacctatgtatgaacaaggattgattttacttccccatctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||||||||||||||||| || || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggagtgggtccgggtggggaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||| |||||||||||||||||||| || ||||||||||| || Sbjct: 1269 tctggagtacttcacttaatatcctccgcagtcttaggctttgggggcatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| |||||||||||||| |||||||| |||||||| || |||||||| ||||||||| Sbjct: 1329 cttctaggacccgagactctcgaagaatcctttccatttttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 1389 agaaataaaatgactaccattttgggtattcacttaatcttgttaggtataggtgccttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 1449 cttctagtactcaaggccctttattttgggggcgtatatgatacctgggccccggggggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||| ||| |||||||| || || ||||||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattagcaacttgaccctcagcccaagtgttatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1569 ctaaaatcgccctttgggggagaagggtggattgttagtgtggacgatttagaagatatc 1628 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||| | ||||| |||| Sbjct: 1629 atcgggggacatctttggttaggtt 1653
>gb|AY705211.1| Apostasia stylidioides PsbC (psbC) gene, partial cds; chloroplast Length = 1406 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 336 gtagctcatgccggattaatcgtattctgggccggtgcaatgaacctatttgaagtggct 395 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| || ||||||||||||||||| || ||||||||||| || |||||| Sbjct: 396 catttcgtaccagagaaacccatgtatgaacaaggattaattttacttcctcatttagct 455 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||||||||| || ||||| | || |||||||||||||||||| Sbjct: 456 actctaggttggggagtaggtccggggggagaagttatcgacacttttccatactttgta 515 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| ||||||| || || |||||||| || Sbjct: 516 tctggagtacttcacttaatttcctccgcagttctaggctttggcggtatttatcatgca 575 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| | ||||| || |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 576 cttataggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaagat 635 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||| |||||| |||| || |||||| ||||||||||| Sbjct: 636 agaaataaaatgactacaattttgggcattcacctaatcttattaggtataggtgctttt 695 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||||||| ||||||||||| || ||||||||||| ||||| || Sbjct: 696 cttctagtactcaaggccctttattttggaggcgtatatgatacatgggcacccggggga 755 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||||||||||||||| || || || ||||||||||||||| Sbjct: 756 ggagatgtaagaaaaattaccaatttgacccttagcccgagcgtgatatttggttattta 815 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 816 ctaaaatccccttttgggggagaaggatggattgttagtgtagacgatttagaagatata 875 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||| ||||| |||| Sbjct: 876 attggaggacatgtctggttaggtt 900
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 626 bits (316), Expect = e-176 Identities = 499/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 35986 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctattcgaagtggct 36045 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||| |||||| |||||||| || ||||||||||| ||| ||||| Sbjct: 36046 catttcgtaccggagaagcacatgtacgaacaaggattaattttacttccccacctagct 36105 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||| |||||||||| ||||| || ||||| |||| || ||||| |||||||| Sbjct: 36106 actttaggttggggggtaggtcctggtggggaagttatagacacctttccttactttgtg 36165 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| || || || || || |||||||| || Sbjct: 36166 tctggagtacttcacttaatttcctccgcagtattgggttttggcggtatttatcatgca 36225 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 36226 cttctgggacccgagacccttgaagaatcttttccattcttcggttatgtgtggaaagat 36285 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 36286 agaaataaaatgactaccattttgggtattcacttaattttgttaggtataggtgctttt 36345 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||| |||||||||||||| || ||||||||||||||||| || Sbjct: 36346 cttctagtattcaaagctctttattttgggggcgtatatgatacctgggctcccgggggg 36405 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 36406 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatatttggttattta 36465 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 36466 ctaaaatctccttttggcggagaaggatggattgttagtgtggacgatttggaagatata 36525 Query: 567 attggtggacatgtatggttgggtt 591 |||| |||||||||||||| |||| Sbjct: 36526 gttgggggacatgtatggttaggtt 36550
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 624 bits (315), Expect = e-176 Identities = 495/560 (88%) Strand = Plus / Minus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31272 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 31213 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| |||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 31212 cattttgtaccagagaagcccatgtatgaacaaggattaattttacttccgcacttagcc 31153 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||||||||| || ||||| |||| || ||||||||||||||| Sbjct: 31152 actctaggttggggagtaggtcctggtggggaagttatagacacctttccatactttgta 31093 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 31092 tctggagtacttcacttaatttcctcggcagtattgggctttggcggtatttatcatgca 31033 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31032 cttctgggccctgagactcttgaagaatcttttccattctttggttatgtatggaaagat 30973 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 30972 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtttaggtgctttt 30913 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 30912 cttctagtattcaaggctctttattttggtggcgtatatgatacctgggctccgggaggg 30853 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||| |||||||||| || ||||||||||| || ||| || |||||||||||||| Sbjct: 30852 ggagatgtacgaaaaattactaacttgacccttagcccaagtattctatttggttattta 30793 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 30792 ctaaaatcgccctttggcggagaaggatggattgtgagtgtggatgatttggaagatata 30733 Query: 567 attggtggacatgtatggtt 586 ||||| || ||||||||||| Sbjct: 30732 attggagggcatgtatggtt 30713
>gb|AF239791.1| Schisandra chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 624 bits (315), Expect = e-176 Identities = 492/556 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaatcgtcttctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 1147 ctcattttgtaccagaaaagcctatgtatgaacaagggttgattttacttccccacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1207 ctactttaggttggggggtaggtccgggtggagaagttatagacacctttccttactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctcggtcctgagactcttgaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| || | Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtataggagcct 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| |||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 1447 ttctcctagtactcaaggctctttattttgggggcgtatatgatacctgggctcctgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||| |||||| || ||||| ||||| || ||| ||||||||||||||| Sbjct: 1507 ggggggatgtaagaagaattactaacttgacacttagcccaagtattatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatctccctttgggggagaaggctggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgt 580 ||||||| |||||||| Sbjct: 1627 taattggaggacatgt 1642
>gb|AF123813.1|AF123813 Acorus calamus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2181 Score = 622 bits (314), Expect = e-175 Identities = 500/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1085 acgtagcccatgccggattaatcgtattctgggcaggagcaatgaacctctttgaagtgg 1144 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 1145 ctcatttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccatctag 1204 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1205 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 1264 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||| |||||||||||||| || || |||||||| | Sbjct: 1265 tatctggagtacttcatctaatttcctctgcagtcttaggctttggcggtatttatcatg 1324 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||| Sbjct: 1325 cgcttcttggacctgagactctagaagaatcctttccgttcttcggttatgtatggaaag 1384 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 1385 atagaaataaaatgaccacaattttaggtattcatctaattttgttagggataggtgctt 1444 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1445 ttcttctagtattcaaggctctttattttgggggtgtatatgacacctgggctcctgggg 1504 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| || || ||||| || ||||||||||||||||||| Sbjct: 1505 ggggagatgtaagaaaaataaccaacttaacacttagcccaagtgttatatttggttatt 1564 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 1565 tactaaaatctccctttggaggagaaggatggattgttagtgtggacgatttagaagata 1624 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1625 taattggaggacatgtatggttaggtt 1651
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 622 bits (314), Expect = e-175 Identities = 500/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 34485 acgtagcccatgccggattaatcgtattctgggcaggagcaatgaacctctttgaagtgg 34544 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 34545 ctcatttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccatctag 34604 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 34605 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 34664 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||| |||||||||||||| || || |||||||| | Sbjct: 34665 tatctggagtacttcatctaatttcctctgcagtcttaggctttggcggtatttatcatg 34724 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||| Sbjct: 34725 cgcttcttggacctgagactctagaagaatcctttccgttcttcggttatgtatggaaag 34784 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 34785 atagaaataaaatgaccacaattttaggtattcatctaattttgttagggataggtgctt 34844 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 34845 ttcttctagtattcaaggctctttattttgggggtgtatatgacacctgggctcctgggg 34904 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| || || ||||| || ||||||||||||||||||| Sbjct: 34905 ggggagatgtaagaaaaataaccaacttaacacttagcccaagtgttatatttggttatt 34964 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 34965 tactaaaatctccctttggaggagaaggatggattgttagtgtggacgatttagaagata 35024 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 35025 taattggaggacatgtatggttaggtt 35051
>gb|AF528934.1| Phytolacca americana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 620 bits (313), Expect = e-174 Identities = 493/558 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| |||| Sbjct: 1149 catttcgtaccagagaagccgatgtatgaacaaggattaattttacttccccacctagca 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggccccggcggggaagttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||||||||||| || ||||| || ||||| ||||| |||||||| || Sbjct: 1269 tctggagtacttcacctaatttcttcggcagtattgggctttggtggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggccctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 1389 agaaataaaatgactacaattttgggtattcacttaatcttgttaggtataggcgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1449 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctccagggggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||| | |||||||| || ||| ||||||||||||||||| Sbjct: 1509 ggggatgtaagaaaaattaccaacgtcacccttagcccaagtattatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1569 ctaaaatcaccttttggaggagaaggatggattgttagtgtggacgatttggaagatata 1628 Query: 567 attggtggacatgtatgg 584 || || |||||||||||| Sbjct: 1629 atcgggggacatgtatgg 1646
>gb|AY741479.1| Camellia sinensis cultivar Taiwan Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 618 bits (312), Expect = e-174 Identities = 498/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattctatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatctccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY147638.1| Butomus umbellatus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 618 bits (312), Expect = e-174 Identities = 499/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgccggattaattgtattttgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct: 1147 cccatttcgtaccagaaaagcccatgtatgaacaaggattgattttacttcctcatctan 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1207 ctactctaggctggggggtaggcccggggggagaagttatagacacctttccgtactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 | ||||| ||||||||| |||||||||| ||||| |||||||| || || |||||||| | Sbjct: 1267 tgtctggggtacttcacttaatttcctctgcagtattaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| || || |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1327 cacttcttgggcctgagactcttgaagaatcttttccattctttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||| ||||||||||||||| |||| |||| Sbjct: 1387 atagaaataaaatgaccacaattttaggtattcatttaattttgttaggtataggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| | || |||||||||||||| |||||||||||||||||||| || Sbjct: 1447 ttcttctagtatttaaagctctttattttggtggtgtatatgatacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| || |||||||| || ||||||||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacttaacccttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 || ||||||||||||||||||||||||| |||||||| | ||| || ||||||||||||| Sbjct: 1567 tattaaaatctccttttgggggagaaggatggattgtgantgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| || ||||||||||| |||| Sbjct: 1627 taattggagggcatgtatggttaggtt 1653
>gb|AY450953.1| Panax ginseng photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, complete cds; chloroplast Length = 2431 Score = 618 bits (312), Expect = e-174 Identities = 498/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 1169 gtagcccatgccggattaattgtattctgggccggaggaatgaacctatttgaagtggct 1228 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1229 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 1288 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| |||||||||||||||||| Sbjct: 1289 actctaggttggggggtaggtcctggtggggaagttatagacacttttccatactttgta 1348 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| |||||||||| ||||| || ||||| ||||| |||||||| || Sbjct: 1349 tctggagtacttcatttaatttcctctgcagtattgggctttggtggtatttatcatgca 1408 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| || || ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1409 cttctagggcctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 1468 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||| Sbjct: 1469 agaaataaaatgactacaattttaggtattcacttaatcttattaggtataggtgctttt 1528 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1529 cttctagtattcaaggctctttattttggtggcgtatatgatacctgggctccggggggg 1588 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 1589 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 1648 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1649 ctaaaatcgccctttggaggggaaggatggattgttagtgtagatgatttggaagatata 1708 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 1709 atcggaggacatgtatggttaggtt 1733
>gb|AF239781.1| Gunnera chilensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2167 Score = 618 bits (312), Expect = e-174 Identities = 498/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| || ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 1149 catttcgtaccagagaaacccatgtatgaacaaggattaattttacttccccatctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || |||||||||||||| Sbjct: 1209 actctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttgtg 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||| ||||||||||| ||||||||| | ||||||||| Sbjct: 1389 agaaataaaatgaccacaattttggggattcacttaatcttgttaggtatcggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||| ||||| | |||||||||| |||||| || ||||||||||||||||| ||| Sbjct: 1449 cttttagtatttaaggctcttttttttgggggcgtatatgatacctgggctcctggaggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||| || ||||||||||| || ||||||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattactaacttgacccttagcccaagtgttatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| ||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1569 ctaaaatctccctttggaggagaaggatggattgttagtgtggacgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 1629 attggaggacatgtatggttaggtt 1653
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 618 bits (312), Expect = e-174 Identities = 498/565 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 36043 gtagcccatgccggattaattgtattctgggccggaggaatgaacctatttgaagtggct 36102 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 36103 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 36162 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| |||||||||||||||||| Sbjct: 36163 actctaggttggggggtaggtcctggtggggaagttatagacacttttccatactttgta 36222 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| |||||||||| ||||| || ||||| ||||| |||||||| || Sbjct: 36223 tctggagtacttcatttaatttcctctgcagtattgggctttggtggtatttatcatgca 36282 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| || || ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 36283 cttctagggcctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 36342 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||| Sbjct: 36343 agaaataaaatgactacaattttaggtattcacttaatcttattaggtataggtgctttt 36402 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 36403 cttctagtattcaaggctctttattttggtggcgtatatgatacctgggctccggggggg 36462 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 36463 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 36522 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 36523 ctaaaatcgccctttggaggggaaggatggattgttagtgtagatgatttggaagatata 36582 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 36583 atcggaggacatgtatggttaggtt 36607
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 618 bits (312), Expect = e-174 Identities = 498/565 (88%) Strand = Plus / Minus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 26933 gtagcccatgctggattaatagtattctgggccggagcaatgaacctttttgaagtggct 26874 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 26873 catttcgtacccgagaagcccatgtatgaacaaggtttaattttacttccccatctagct 26814 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || |||||||||||||| Sbjct: 26813 actctaggttggggggtaggtcctgggggggaagttatagacacctttccatactttgtg 26754 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 26753 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 26694 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 26693 cttttgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 26634 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 26633 agaaataaaatgactacaattttgggtattcacttaatcttgttaggtataggtgcgttt 26574 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| ||| |||||||||| ||||| || Sbjct: 26573 cttctagtattcaaggctctttattttggaggtatatatgatacgtgggctccggggggc 26514 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||| Sbjct: 26513 ggagatgtaagaaaaataaccaatttgacccttagtccaagtattatatttggatattta 26454 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||||| Sbjct: 26453 ttaaaatcaccttttgggggagaagggtggattgttagtgtggacgatttggaagatata 26394 Query: 567 attggtggacatgtatggttgggtt 591 ||||| || |||||||||||||||| Sbjct: 26393 attggggggcatgtatggttgggtt 26369
>gb|AY705183.1| Vanilla cf. barbellata Chase O-591 PsbC (psbC) gene, partial cds; chloroplast Length = 1401 Score = 617 bits (311), Expect = e-173 Identities = 499/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggtcggaggaatgaacctatttgaagtgg 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 507 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| Sbjct: 627 atagaaataaaatgactacaattttggggattcacttaattttattaggtataggcgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || ||||||||||||| Sbjct: 747 gaggagatgtcagaaaaattaccaacttgacccttagcccaaacgtnatatttggttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 867 taatcgggggacatgtttggttaggtt 893
>gb|AF528935.1| Piper betle photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 615 bits (310), Expect = e-173 Identities = 499/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| || |||||||||||||| ||| Sbjct: 1147 ctcatttcgtaccagagaaacccatgtatgaacaaggattaattttacttccacatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| | || || ||||||||||||| Sbjct: 1207 ctactctaggttggggcgtaggtccgggtggggaagttatcgacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||| ||||||||||||||||| ||||| ||||| || | Sbjct: 1267 tatctggagtacttcacttaatttcttccgcagtcttaggctttggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1327 cacttctaggacctgagactctggaagaatcttttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1387 atagaaataaaatgaccacaattttgggtattcacttaattttgttaggtataggtgcat 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||| | || |||||||||||||| || |||||||| |||||||| || Sbjct: 1447 ttcttctagtatttaaagctctttattttggaggcgtatatgacacctgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| |||||||||| || ||||| ||||||||||||| Sbjct: 1507 ggggagatgtaagaaaaattaccaacctgacccttagcccaagtgtgatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||| ||||| ||||| || ||||||||||||||||| || |||||||||| Sbjct: 1567 tactaaaatctccctttggaggagagggttggattgttagtgtagacgacttagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||| ||| |||||||||||||| |||| Sbjct: 1627 taactgggggacatgtatggttaggtt 1653
>gb|AY705181.1| Vanilla africana PsbC (psbC) gene, partial cds; chloroplast Length = 1428 Score = 615 bits (310), Expect = e-173 Identities = 499/567 (88%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 334 acgtagctcatgccggattaattgtattctgggccggaggaatgaacctatttgaagtgg 393 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 394 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 453 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 454 ctactctaggatggggagtaggtccggggggagaagttatagacacctttccatactttg 513 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 514 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 573 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 574 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 633 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| Sbjct: 634 atagaaataaaatgactacaattttggggattcacttaattttattaggtataggcgctt 693 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 694 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 753 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || ||||||||||||| Sbjct: 754 ggggagatgtcagaaaaattaccaacttgacccttagcccaaacgtgatatttggttatt 813 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 814 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 873 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 874 taatcgggggacatgtttggttaggtt 900
>gb|AY705184.1| Vanilla roscheri PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 613 bits (309), Expect = e-172 Identities = 510/582 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggtcggaggaatgaacctatttgaagtgg 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 507 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| Sbjct: 627 atagaaataaaatgactacaattttggggattcacttaattttattaggtataggcgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || |||||| |||||| Sbjct: 747 ggggagatgtcagaaaaattaccaacttgacccttagcccaaacgtgatatttagttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 |||| || |||||||| ||||| |||| |||||| |||||| Sbjct: 867 taatcgggggacatgtttggttaggttccatttgtatatttg 908
>dbj|AB112508.1| Humulus lupulus chloroplast DNA, downstream region of psbC, North American wild, haplotype:NA3 Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112507.1| Humulus lupulus chloroplast DNA, downstream region of psbC, North American wild, haplotype:NA1 Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112506.1| Humulus lupulus chloroplast DNA, downstream region of psbC, North American wild, haplotype:NA2 Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112505.1| Humulus lupulus chloroplast DNA, downstream region of psbC, North American wild, haplotype:NA4 Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112504.1| Humulus lupulus chloroplast DNA, downstream region of psbC, Japanese wild Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112503.1| Humulus lupulus chloroplast DNA, downstream region of psbC, Chinese wild, haplotype:SC Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112502.1| Humulus lupulus chloroplast DNA, downstream region of psbC, Chinese wild, haplotype:NC Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112501.1| Humulus japonicus chloroplast DNA, downstream region of psbC, European wild, haplotype:EP Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>dbj|AB112500.1| Humulus lupulus chloroplast DNA, downstream region of psbC, European wild, haplotype:E Length = 545 Score = 613 bits (309), Expect = e-172 Identities = 459/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>gb|AY741478.1| Camellia sinensis var. assamica cultivar Shan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 611 bits (308), Expect = e-171 Identities = 497/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattctatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatccccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741477.1| Camellia sinensis var. assamica cultivar TTES No. 18 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 611 bits (308), Expect = e-171 Identities = 497/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattctatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatccccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741466.1| Camellia tenuifolia cultivar Don San photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 611 bits (308), Expect = e-171 Identities = 497/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcttctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatccccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AY741465.1| Camellia furfuracea cultivar Chyh Ya Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 611 bits (308), Expect = e-171 Identities = 497/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 98 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 99 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 158 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 159 actctaggttggggggtaggtcctggtggggaggttatagacacctttccatactttgta 218 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 219 tctggagtacttcacttaatttcttctgcagtattgggctttggcggtatttatcatgca 278 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 279 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 338 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 339 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 398 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 399 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 458 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 459 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 518 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 519 ctaaaatccccttttggaggggaaggatggattgttagtgtagacgatttggaagatata 578 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 579 atcggaggacatgtatggttaggtt 603
>gb|AF528940.1| Stewartia pseudocamellia photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 611 bits (308), Expect = e-171 Identities = 497/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 1149 cattttgtaccagagaagcctatgtatgagcaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || | ||| |||| || ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggccctggtggggaggttatagacacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1269 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttctgggacctgagactctggaagaatcttttccattcttcggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1389 agaaataaaatgaccacaattttaggtattcacttaatcttgttagggataggtgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1449 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| || |||||||| || ||| ||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttaacccttagcccaagtattatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1569 ctaaaatcgccttttggaggggaagggtggattgttagtgtagacgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggtt 591 || || |||||||||||||| |||| Sbjct: 1629 atcggaggacatgtatggttaggtt 1653
>gb|AY705200.1| Cleistes sp. Jardim 2579 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 611 bits (308), Expect = e-171 Identities = 503/572 (87%), Gaps = 1/572 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 338 cttggagctcacgtagctcatgcgggattaatcgtattctgggccggagcaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | ||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 398 tttgaagtgtctcattttgtacccgagaaacccatgtatgaacaaggattgattttactt 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||||||||||||||||| ||||| || || ||| ||||||| ||||||||| Sbjct: 458 ccacacttagctactctagggtggggggtcggtccagggggagaagttctcgatactttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||||||||| || ||||||| || ||||||||||| || ||||| Sbjct: 518 ccatactttgtatctggcgtactgcatttaatttcttctgcagtcttaggatttggtggt 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 578 atttatcatgcacttctaggacctgaaactctcgaagaatcctttccattctttggttat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 638 gtatggaaagatcgaaataaaatgactacaatcttgggtattcacctaattttattaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||| |||||| |||||||||||||| || ||||||||||| ||| Sbjct: 698 ctaggtgcttttcttctagnactcaaagctctttattttggaggcgtatatgatacttgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||||||||||||||||| || |||||||| || || || ||| Sbjct: 758 gcacccggaggtggggatgtaagaaaaattaccaactttacccttagcccaagcgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 818 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 877 Query: 555 ttagaagatataattggtggacatgtatggtt 586 ||||||||||||||||| |||||||| ||||| Sbjct: 878 ttagaagatataattggaggacatgtctggtt 909
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 609 bits (307), Expect = e-171 Identities = 508/580 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35765 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 35824 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| || |||||||| |||||||| |||||||| || ||||||||||| ||| ||||| Sbjct: 35825 cattttgtcccagaaaaacccatgtacgaacaaggattaattttacttccccacctagct 35884 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||| ||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 35885 actctaggctggggggtaggtcctggcggagaagttatagacacctttccatactttgta 35944 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| || || || ||||| || || |||||||| || Sbjct: 35945 tctggagtacttcacttaatttcctctgctgtattgggctttggcggtatttatcatgca 36004 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 36005 cttctgggacctgaaactcttgaagaatcttttccatttttcggttatgtatggaaagat 36064 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 36065 agaaataaaatgaccacaattttgggtattcacttaattttgctaggtataggtgctttt 36124 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||| ||||||||||| || Sbjct: 36125 cttctagtattcaaggctctttattttgggggcgtatacgatacctgggctccgggaggg 36184 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 36185 ggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttattta 36244 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 36245 ctaaaatcgccctttggaggcgaagggtggattgttagtgtggacgatttggaagatata 36304 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| |||||||||||||| |||| |||||| |||||| Sbjct: 36305 attggaggacatgtatggttaggttccatttgtatatttg 36344
>gb|AY363056.1|AY363056S1 Spiranthes romanzoffiana PsbC (psbC) gene, partial cds; chloroplast Length = 677 Score = 609 bits (307), Expect = e-171 Identities = 498/567 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 59 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtag 118 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 119 ctcattttgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacttag 178 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||| |||| || ||||| | || || ||||||||||||| Sbjct: 179 ctactctagggtggggaataggtccggggggagaagttatcgacacctttccatactttg 238 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 239 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 298 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 299 cgcttctaggacctgaaactcttgaagaatcctttccattcttcgggtatgtatggaaag 358 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||| Sbjct: 359 atagaaataaaatgactacaattttgggtattcacctcgttttattaggtataggtgctt 418 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 419 ttcttctagtactcaaggctctttattttggaggcgtatatgatacctgggcacccggag 478 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||||||| ||||||||||| || || || || |||||||||| Sbjct: 479 ggggagatgtaagaaaaattaccaacttgacccttagcccaagcgtgatctttggttatt 538 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| ||| |||| |||||||||||||| || ||||||||||||| Sbjct: 539 tactaaaatctccttttggagganaaggatggattgttagtgtggacgatttagaagata 598 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||| ||||| |||| Sbjct: 599 taattggaggacatgtctggttaggtt 625
>gb|AY705185.1| Vanilla palmarum PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1382 Score = 609 bits (307), Expect = e-171 Identities = 498/567 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgg 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| | |||||| ||||||| ||||| |||||||||| || || |||||||| | Sbjct: 507 tatctggaggacttcatttaatttcttccgctttcttaggctttggcgggatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||| Sbjct: 627 atagaaataaaatgactacaattttngggattcacttaattttattaggtataggtgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||||||||||||||| || | || ||||||||||||| Sbjct: 747 ggggagatgtcagaaaaattaccaatttgacccttagcccaaacgtgatatttggttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 867 taatcgggggacatgtttggttaggtt 893
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 609 bits (307), Expect = e-171 Identities = 508/580 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 33058 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggct 33117 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 33118 cattttgtacctgaaaagcccatgtatgaacaaggattgattttacttccccacctagcc 33177 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||| |||| ||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 33178 actttaggctggggggtaggtcctgggggagaagttatagacacctttccatactttgta 33237 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 33238 tctggagtacttcacttaatttcttctgcagttttgggctttggcggtatttatcatgca 33297 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 33298 cttctgggacccgaaactcttgaagaatcttttccatttttcggttatgtatggaaagat 33357 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33358 agaaataaaatgaccaccattttgggtattcacttaattttgttaggtgtaggtgctttt 33417 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||||| |||||||| || ||||||||||||||||| || Sbjct: 33418 cttctagtattcaaggctctctattttgggggcgtatatgatacctgggctccaggaggg 33477 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 33478 ggggatgtaagaaaaattacaaacttgactcttagcccaagtgttatatttggttattta 33537 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 33538 ctaaaatctccctttgggggagaaggatggattgttagtgtggacgatttggaagatata 33597 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| || ||||||||||| |||| |||||| |||||| Sbjct: 33598 attggagggcatgtatggttaggttccatttgtatatttg 33637
>gb|AY147641.1| Burmannia capitata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2178 Score = 607 bits (306), Expect = e-170 Identities = 504/575 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||||| | Sbjct: 1087 acgtagcccatgctggattaatcgtattttgggctggggcaatgaacctctttgaagttg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 1147 ctcatttcgtaccagagaaaccgatgtatgaacaaggattgattttacttccccacttag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggaccggggggggaagttatagatacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||| |||||| ||||||| || || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcttccgcattcttaggatttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggaccggaaactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtataggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||||||||||| ||||||||||||||||| || ||||| ||||||||||| || Sbjct: 1447 ttcttctagtacttaaggctctttattttggaggcgtatacgatacctgggcacccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| ||||||||||| || ||||| ||||| || | |||||||||||||||| Sbjct: 1507 ggggggatgtcagaaaaattactaacttgactcttagcccaaaggttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1567 tactaaaatctccttttggaggagaaggatggattgttagtgtagacgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| ||||| |||||||| | || ||||||| Sbjct: 1627 taattgggggacacgtatggttagcttctatttgt 1661
>gb|AY705182.1| Vanilla cf. planifolia Chase O-170 PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 607 bits (306), Expect = e-170 Identities = 498/567 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgg 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||| ||||| |||||||||| || || |||||||| | Sbjct: 507 tatctggagtacttcatttaatttcttccgctttcttaggctttggcggtatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| Sbjct: 627 atagaaataaaatgactacaattttggggattcacttaattttattaggtataggcgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || ||||||||||||| Sbjct: 747 ggggagatgtcagaaaaattaccaacttgacccttagcccaaacgtgatatttggttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 867 taatcgggggacatgtttggttaggtt 893
>gb|AY705179.1| Vanilla imperialis PsbC (psbC) gene, partial cds; chloroplast Length = 1419 Score = 607 bits (306), Expect = e-170 Identities = 498/567 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggtcggaggaatgaacctatttgaagtgt 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 507 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| Sbjct: 627 atagaaataaaatgactacaattttggggattcacttaattttattaggtataggcgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || ||||||||||||| Sbjct: 747 gaggagatgtcagaaaaattaccaacttgacccttagcccaaacgtgatatttggttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 867 taatcgggggacatgtttggttaggtt 893
>gb|AY705180.1| Vanilla aphylla PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 605 bits (305), Expect = e-170 Identities = 497/567 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 327 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgg 386 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 387 cccatttcgtaccagggaaacccatgtatgaacaaggattgattttactcccgcacttag 446 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || ||||| |||| || ||||||||||||| Sbjct: 447 ctactctagggtggggagtaggtccggggggagaagttatagacacctttccatactttg 506 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||| | Sbjct: 507 tatctggagtacttcatttaatttcctccgctttcttaggctttggtggtatttatcatg 566 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 567 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 626 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||| || ||||| ||||||| |||||||||||||| |||||| |||| |||| Sbjct: 627 atagaaataaantggctacanttttgggnattcacttaattttattaggtataggcgctt 686 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 687 ttcttctagtactcaaggctctgtattttggaggtgtatatgatacctgggcacccgggg 746 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || ||||||||||||| Sbjct: 747 gaggagatgtcagaaaaattaccaacttgacccttagcccaaacgtgatatttggttatt 806 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 807 tactaaaatctccttttgggggagaaggatggattgttagtgtggacgatttggaagata 866 Query: 565 taattggtggacatgtatggttgggtt 591 |||| || |||||||| ||||| |||| Sbjct: 867 taatcgggggacatgtttggttaggtt 893
>dbj|AB112509.1| Humulus japonicus chloroplast DNA, downstream region of psbC, Japanese wild Length = 545 Score = 605 bits (305), Expect = e-170 Identities = 458/514 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 91 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 92 catttcgtcccagagaagcctatgtatgaacaaggcttaattttacttccccacctagct 151 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 152 actctaggttggggggtagggcccggcggggaagttctagacacctttccatactttgtg 211 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 212 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 271 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 272 cttctgggacctgaaactcttgaagaatcttttccattcttcggttatgtatggaaagat 331 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 cgaaataaaatgactacaattttgggtattcacttaattttgttaggtgtaggtgctttt 391 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | ||||||||||||||||| |||||||||||||||||||| || Sbjct: 392 cttctagtatttaaggctctttattttgggggtgtatatgatacctgggctccgggggga 451 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct: 452 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattgtatttggttattta 511 Query: 507 ctaaaatctccttttgggggagaagggtggattg 540 || |||||||||||||| ||||| |||||||||| Sbjct: 512 ctcaaatctccttttggtggagaggggtggattg 545
>gb|AF528939.1| Spinacia oleracea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 603 bits (304), Expect = e-169 Identities = 502/573 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1089 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| |||||||||||||||||| Sbjct: 1209 actctaggttggggggtaggccctggcggggaagttatagacacttttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| ||||||| || || || || ||||| ||||| |||||||| || Sbjct: 1269 tcgggagtacttcacttaatttcgtcggccgtattgggctttggtggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| |||| || || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1329 cttttgggccctgaaactcttgaagaatcttttccattcttcggttatgtgtggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||||| Sbjct: 1389 agaaataaaatgaccacaattttgggcattcacttaatcttgttaggtataggcgctttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1449 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggt 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacgtcacccttagtccaagtattatatttggttattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1569 ctaaaatcgccttttggaggagaagggtggattgttagtgtagacgatttggaagatata 1628 Query: 567 attggtggacatgtatggttgggttttatttgt 599 || || || ||||||||| | ||||| |||||| Sbjct: 1629 ataggggggcatgtatggataggtttcatttgt 1661
>gb|AY705188.1| Pseudovanilla ponapensis PsbC (psbC) gene, partial cds; chloroplast Length = 1439 Score = 603 bits (304), Expect = e-169 Identities = 506/577 (87%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 338 cttggagctcacgtagctcatgccggattaatcgtattctgggccggaggaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 || |||||||| |||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 398 ttcgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacta 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||||||||||||||||| ||||||||||| || ||||| |||| || ||| Sbjct: 458 ccccacttagctactctagggtggggagtaggcccggggggagaagttatagacaccttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 |||||||||||||| || |||||||| ||||||||||||| |||| ||||| || ||| Sbjct: 518 ccatactttgtatcgggagtacttcatttaatttcctccgctttcttgggctttggcggc 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||| | || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 578 atttatcatgcgcttttaggtcctgaaactcttgaagaatcctttcctttcttcggttat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 638 gtatggaaagatagaaataaaatgactaccattttgggtattcacttaattttattaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 698 ataggtgcttttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||| |||||||||||||| ||||||||||| || ||||| ||| Sbjct: 758 gctccgggggggggagatgttagaaaaattaccaacttgacccttagcccaagtgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || | | Sbjct: 818 tttggttatttactaaaatctccttttggaggagaaggatggattgttagtgtggacggt 877 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||| ||||| |||| Sbjct: 878 ttagaagatataattggaggacatgtttggttaggtt 914
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 599 bits (302), Expect = e-168 Identities = 503/575 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 38994 acgtggcccatgccggattaatcgtattctgggcgggagcaatgaatctatttgaagtgg 39053 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || || |||||||||||||| || ||||||||||| || ||| Sbjct: 39054 ctcattttgtaccagagaaacctatgtatgaacaaggattaattttacttccccatctag 39113 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 39114 ctactctaggttggggggtaggtcctgggggggaagttatagacacctttccatactttg 39173 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||| ||||||| ||||| |||||||| | Sbjct: 39174 tatctggagtacttcatttaatttcctctgcagtcctaggctttggtggtatttatcatg 39233 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 39234 cacttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 39293 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || ||||||||||||||||||||||| |||||| |||| |||| Sbjct: 39294 atagaaataaaatgaccactattttgggtattcacttaattttattaggtgtaggcgctt 39353 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| ||||||||||||||||||| || |||||||||||||||||||| Sbjct: 39354 ttctcctagtgttcaaggctctttattttggaggcgtatatgatacctgggcccccggtg 39413 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| |||| ||||| || ||||||||||||||||||| Sbjct: 39414 gcggagatgtaagaaaaataaccaacctgacacttagcccaagtgttatatttggttatt 39473 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 39474 tgctaaaatctccttttgggggagaaggatggattgttagtgtggatgatttagaagata 39533 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| ||||| |||||||| ||||| |||||| Sbjct: 39534 taattggaggacacgtatggttaggtttcatttgt 39568
>gb|AF528926.1| Euonymus alatus photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 597 bits (301), Expect = e-167 Identities = 490/558 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1089 gtagcacatgccggattaatcgtattctgggccggcgcaatgaacttatttgaagtggct 1148 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || || || |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1149 catttcgtaccggagaaaccgatgtatgaacaaggattaattttacttccccacctagct 1208 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| ||||||| ||||||||||||||| Sbjct: 1209 actctaggttggggggtaggtcctgggggagaagttatagatacctttccatactttgta 1268 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| || |||||| |||||||||||||||| |||||||| || || |||||||| || Sbjct: 1269 tctggagtgcttcacttaatttcctccgcagtattaggctttggcggtatttatcatgca 1328 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1329 cttctgggacctgagacccttgaagaatcttttccattctttggttatgtatggaaagat 1388 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1389 agaaataaaatgacaacaattttgggtattcacttaatcttgttaggtctaggtgccttt 1448 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 || ||||| | || |||||||||||||| || ||||||||||||||||| || Sbjct: 1449 ctgttagtatttaaagctctttattttgggggcgtatatgatacctgggctccggggggg 1508 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 1509 ggagatgtaagaaaaattaccaacttgactcttagtccaagtgttatatttgggtattta 1568 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| |||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1569 ctaaaatccccctttggaggagaaggatggattgttagtgtggacgatttcgaagatata 1628 Query: 567 attggtggacatgtatgg 584 ||||| |||||||||||| Sbjct: 1629 attggaggacatgtatgg 1646
>gb|AY705187.1| Pseudovanilla foliata PsbC (psbC) gene, partial cds; chloroplast Length = 1393 Score = 595 bits (300), Expect = e-167 Identities = 505/577 (87%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 321 cttggagctcacgtagctcatgccggattaatcgtattctgggccggaggaatgaaccta 380 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 || |||||||| |||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 381 ttcgaagtggctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacta 440 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||||||||||||||||| ||||||||||| || ||||| |||| || ||| Sbjct: 441 ccccacttagctactctagggtggggagtaggcccggggggagaagttatagacaccttt 500 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 |||||||||||||| || |||||||| ||||||||||||| |||| ||||| || ||| Sbjct: 501 ccatactttgtatcgggagtacttcatttaatttcctccgctttcttgggctttggcggc 560 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| |||||| | || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 561 atttatcatgcgcttttaggtcctgaaactcttgaagaatcctttcctttcttcggttat 620 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 621 gtatggaaagatagaaataaaatgactaccattttgggtattcacttaattttattaggt 680 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 681 ataggtgcttttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgg 740 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||| |||||||||||||| ||||||||||| || ||||| ||| Sbjct: 741 gctccgggggggggagatgttagaaaaattaccaacttgacccttagcccaagtgtgata 800 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || | | Sbjct: 801 tttggttatttactaaaatctccttttggaggagaaggatggattgttagtgtggacggt 860 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||| ||| |||||||| ||||| |||| Sbjct: 861 ttagaagatataactggaggacatgtttggttaggtt 897
>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence Length = 23359 Score = 595 bits (300), Expect = e-167 Identities = 495/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 17946 gtagcccatgccggattaatagtattctgggccggagcaatgaacctatttgaagtcgct 18005 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 18006 catttcgtacctgagaagcccatgtatgaacaaggcttaattttacttccccatctagct 18065 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || |||| ||||||| |||||||||||||| Sbjct: 18066 actctaggttggggggtaggtcctggaggggaagtaatagatacctttccatactttgtg 18125 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||||||||| || ||||| || || |||||||| || Sbjct: 18126 tctggagtacttcacttaatttcctccgcagtattgggctttggcggtatttatcatgca 18185 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 18186 cttctgggacctgaaactcttgaagaatcttttccattctttggttatgtatggaaagac 18245 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| ||||| |||||||||||||| ||||||||| |||| |||||| Sbjct: 18246 agaaataaaatgactactattttaggtattcacttaatattgttaggtataggggctttt 18305 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | |||||| ||||||||| ||| |||||||||||||||| || Sbjct: 18306 cttctagtatttaaggcttcttattttggaggtatatatgatacctgggctccaggaggg 18365 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||| || || ||||||||||| ||| ||||||| ||||||||| Sbjct: 18366 ggagatgtaagaaaaattacaaacttaacccttagtccaagtattatattcggttattta 18425 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 18426 ctaaaatctccttttgggggagaaggatggattgttagtgtggatgatttggaagacata 18485 Query: 567 attggtggacatgtatggttgggtt 591 ||||| || |||||||||||||||| Sbjct: 18486 attggagggcatgtatggttgggtt 18510
>gb|M27309.1|PEACPD2 Pisum sativum D2 photosystem II protein and 44 kd photosystem II protein genes, complete cds; tRNA-Ser gene, complete sequence; and unknown gene; chloroplast genes for chloroplast products Length = 4078 Score = 595 bits (300), Expect = e-167 Identities = 495/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1649 gtagcccatgccggattaatagtattctgggccggagcaatgaacctatttgaagttgct 1708 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| || ||||||||||| || |||| Sbjct: 1709 catttcgtacccgagaagcccatgtatgaacaaggcttaattttacttccccatctagca 1768 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| | || || |||||||||||||| Sbjct: 1769 actctaggttggggggtaggtcctggaggggaagttatcgacacctttccatactttgtg 1828 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1829 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1888 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1889 cttctgggacctgagactcttgaagaatcttttccattctttggttatgtatggaaagat 1948 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 1949 agaaataaaatgactactattttaggtattcacttaattttgttaggtatagggtctttt 2008 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | |||||| |||||||||| ||| |||||||||||||||| || Sbjct: 2009 cttctagtatttaaggctttttattttggaggtatatatgatacctgggctccaggaggg 2068 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 2069 ggagatgtaagaaaaattaccaacttcacccttagtccaagcattctatttggttattta 2128 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 2129 ctaaaatccccttttgggggagaaggttggattgttagtgtggacgatttggaagatata 2188 Query: 567 attggtggacatgtatggttgggtt 591 ||||| ||||||||||||||||||| Sbjct: 2189 attgggggacatgtatggttgggtt 2213
>gb|AF239786.1| Pisum sativum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2138 Score = 595 bits (300), Expect = e-167 Identities = 495/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1068 gtagcccatgccggattaatagtattctgggccggagcaatgaacctatttgaagttgct 1127 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| || ||||||||||| || |||| Sbjct: 1128 catttcgtacccgagaagcccatgtatgaacaaggcttaattttacttccccatctagca 1187 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| | || || |||||||||||||| Sbjct: 1188 actctaggttggggggtaggtcctggaggggaagttatcgacacctttccatactttgtg 1247 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 1248 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 1307 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1308 cttctgggacctgagactcttgaagaatcttttccattctttggttatgtatggaaagat 1367 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 1368 agaaataaaatgactactattttaggtattcacttaattttgttaggtatagggtctttt 1427 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | |||||| |||||||||| ||| |||||||||||||||| || Sbjct: 1428 cttctagtatttaaggctttttattttggaggtatatatgatacctgggctccaggaggg 1487 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 1488 ggagatgtaagaaaaattaccaacttcacccttagtccaagcattctatttggttattta 1547 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1548 ctaaaatccccttttgggggagaaggttggattgttagtgtggacgatttggaagatata 1607 Query: 567 attggtggacatgtatggttgggtt 591 ||||| ||||||||||||||||||| Sbjct: 1608 attgggggacatgtatggttgggtt 1632
>gb|DQ069643.1| Acorus americanus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1383 Score = 593 bits (299), Expect = e-166 Identities = 499/568 (87%), Gaps = 2/568 (0%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 122 acgtagcccatgccggattaatcgtattctgggcaggagcaatgaacctctttgaagtgg 181 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 182 ctcatttcgtaccagagaagcccatgtatgaacaaggattaattttacttccccatctag 241 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 242 ctactctaggttggggggtaggtccgggtggggaagttatagacacctttccatactttg 301 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||| |||||||||||||| || || |||||||| | Sbjct: 302 tatctggagtacttcatctaatttcctctgcagtcttaggctttggcggtatttatcatg 361 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||| Sbjct: 362 cgcttcttggacctgagactctagaagaatcctttccgttcttcggttatgtatggaaag 421 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 422 atagaaataaaatgaccacaattttaggtattcatctaattttgttagggataggtgctt 481 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccct-nnn 443 ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 482 ttcttctagtattcaaggctctttattttgggggtgtatatgacacctgggctcctgggg 541 Query: 444 nnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttat 503 ||||||||||||||| ||||| || || | ||| || |||||||||||||||||| Sbjct: 542 gggggagatgtaagaaaaataaccaacttaacac-tagcccaagtgttatatttggttat 600 Query: 504 ttactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagat 563 |||||||||||||| ||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 601 ttactaaaatctccctttggaggagaaggatggattgttagtgtggacgatttagaagat 660 Query: 564 ataattggtggacatgtatggttgggtt 591 |||||||| |||||||||||||| |||| Sbjct: 661 ataattggaggacatgtatggttaggtt 688
>gb|AF239774.1| Arabidopsis thaliana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2101 Score = 593 bits (299), Expect = e-166 Identities = 506/580 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1062 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggcc 1121 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||| |||| Sbjct: 1122 cattttgtacctgaaaagcccatgtatgaacaaggattaattttacttccccacctagcc 1181 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||| |||| ||||| ||||| || ||||| |||| || ||||| ||||||||| Sbjct: 1182 actttaggatggggggtaggtcctgggggagaagttatagacacctttccgtactttgta 1241 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 1242 tctggagtacttcacttaatttcttctgcagttttgggctttggcggtatttatcatgca 1301 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||| |||||||||||||||||||| || || |||||||| ||||||||| Sbjct: 1302 cttctgggacccgaaactcttgaagaatcttttccctttttcggttatgtatggaaagat 1361 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1362 agaaataaaatgaccaccattttgggtattcacttaattttgttaggtgtaggtgccttt 1421 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||||| |||||||| || ||||||||||||||||| || Sbjct: 1422 cttctagtattcaaggctctctattttgggggcgtatatgatacctgggctccgggaggg 1481 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 1482 ggggatgtaagaaaaattacaaacttgactcttagcccaagtgttatatttggttattta 1541 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 1542 ctaaaatctccctttgggggagaaggatggattgttagtgtggacgatttggaagatata 1601 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| |||||||||||||| |||| |||||| |||||| Sbjct: 1602 attggaggacatgtatggttaggttccatttgtatatttg 1641
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 593 bits (299), Expect = e-166 Identities = 506/580 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 33879 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggcc 33938 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||| |||| Sbjct: 33939 cattttgtacctgaaaagcccatgtatgaacaaggattaattttacttccccacctagcc 33998 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 ||| |||| ||||| ||||| || ||||| |||| || ||||| ||||||||| Sbjct: 33999 actttaggatggggggtaggtcctgggggagaagttatagacacctttccgtactttgta 34058 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 34059 tctggagtacttcacttaatttcttctgcagttttgggctttggcggtatttatcatgca 34118 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||| |||||||||||||||||||| || || |||||||| ||||||||| Sbjct: 34119 cttctgggacccgaaactcttgaagaatcttttccctttttcggttatgtatggaaagat 34178 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 34179 agaaataaaatgaccaccattttgggtattcacttaattttgttaggtgtaggtgccttt 34238 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||||| |||||||| || ||||||||||||||||| || Sbjct: 34239 cttctagtattcaaggctctctattttgggggcgtatatgatacctgggctccgggaggg 34298 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 34299 ggggatgtaagaaaaattacaaacttgactcttagcccaagtgttatatttggttattta 34358 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 34359 ctaaaatctccctttgggggagaaggatggattgttagtgtggacgatttggaagatata 34418 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| |||||||||||||| |||| |||||| |||||| Sbjct: 34419 attggaggacatgtatggttaggttccatttgtatatttg 34458
>gb|AF528925.1| Cunninghamia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 591 bits (298), Expect = e-165 Identities = 502/575 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1087 acgtggcccatgccggattaatcgtattctgggcgggagcaatgaatctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || || |||||||||||||| || ||||||||||| || ||| Sbjct: 1147 ctcattttgtaccagagaaacctatgtatgaacaaggattaattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctgggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||| ||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcatttaatttcctctgcagtcctaggctttgggggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || ||||||||||||||||||||||| |||||| |||| |||| Sbjct: 1387 atagaaataaaatgaccactattttgggtattcacttaattttattaggtgtaggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| ||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttctcctagtgttcaaggctctttattttggaggcgtatatgatacctgggcccccggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| |||| ||||| || ||||||||||||||||||| Sbjct: 1507 gcggagatgtaagaaaaataaccaacctgacacttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1567 tgctaaaatctccttttgggggagaaggatggattgttagtgtggatgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| ||||| |||||||| ||||| |||||| Sbjct: 1627 taattggaggacacgtatggttaggtttcatttgt 1661
>gb|AY705199.1| Cleistes cipoana PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 591 bits (298), Expect = e-165 Identities = 500/572 (87%), Gaps = 1/572 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 338 cttggagctcacgtagctcatgcgggattaatcgtattctgggccggagcaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | ||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 398 tttgaagtgtctcattttgtacccgagaaacccatgtatgaacaaggattgattttactt 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||||||||||||||||| ||||| || || ||| ||||||| ||||||||| Sbjct: 458 ccacacttagctactctagggtggggggtcggtccagggggagaagttctcgatactttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||||||||| || ||||||| || ||||||||||| || ||||| Sbjct: 518 ccatactttgtatctggcgtactgcatttaatttcttctgcagtcttaggatttggtggt 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| || ||||| ||| |||| || ||||||||||| ||| Sbjct: 578 atttatcatgcacttctaggacctgaaactctcgaaaaatccttnccattctttggntat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| ||||||||||||||||||| |||||||||||| ||||||| | |||| Sbjct: 638 gtatggaaagatcgaaataaaatgactacaatcttgggtattcacctaattttatnaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||| Sbjct: 698 ctaggtgcttttcttctagtactcaaagctctttattttggaggcgtatatgatacttgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||||||||||||||||| || |||||||| || || || ||| Sbjct: 758 gcacccggaggtggggatgtaagaaaaattaccaactttacccttagcccaagcgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 818 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 877 Query: 555 ttagaagatataattggtggacatgtatggtt 586 ||||||||||||||||| |||||||| ||||| Sbjct: 878 ttagaagatataattggaggacatgtctggtt 909
>gb|AF235043.1|AF235043 Amborella trichopoda photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 591 bits (298), Expect = e-165 Identities = 502/575 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1087 acgtggcccatgccggattaatcgtattctgggcgggagcaatgaatctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| |||||||| || || |||||||||||||| || ||||||||||| || ||| Sbjct: 1147 ctcattttgtaccagagaaacctatgtatgaacaaggattaattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 1207 ctactctaggttggggggtaggtcctgggggggaagttatagacacctttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| |||||||||| |||||| ||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcatttaatttcctctgcagtcctaggctttgggggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1327 cacttcttggacctgagactcttgaagaatcctttccattcttcggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || ||||||||||||||||||||||| |||||| |||| |||| Sbjct: 1387 atagaaataaaatgaccactattttgggtattcacttaattttattaggtgtaggcgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| ||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1447 ttctcctagtgttcaaggctctttattttggaggcgtatatgatacctgggcccccggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||| ||||| |||| ||||| || ||||||||||||||||||| Sbjct: 1507 gcggagatgtaagaaaaataaccaacctgacacttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1567 tgctaaaatctccttttgggggagaaggatggattgttagtgtggatgatttagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| ||||| |||||||| ||||| |||||| Sbjct: 1627 taattggaggacacgtatggttaggtttcatttgt 1661
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 587 bits (296), Expect = e-164 Identities = 494/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 33664 gtagcccatgccggattaatcgtattctgggccggagcaatgaatctatttgaagtggct 33723 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 33724 catttcgtaccagaaaagcctatgtatgaacaaggattaattttacttcctcacctagct 33783 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 33784 actctaggttggggggtaggtcctggtggggaagttatagatacttttccatactttgta 33843 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| |||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 33844 tctggagtacttcatttaatttcctctgcagtattgggctttggcggtatttatcatgca 33903 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| | ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 33904 cttttaggacctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 33963 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 33964 agaaataaaatgaccacaattttaggtattcatttaatcttgttaggtctaggtgctttt 34023 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 34024 cttctagtattcaaggctctttattttgggggcgtatatgatacttgggctccgggagga 34083 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| ||||| ||||| || ||| | ||||||||||||||| Sbjct: 34084 ggagatgtaagaaaaatcaccaacttgacgcttagcccaagtatcatatttggttattta 34143 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || |||||||| ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 34144 ctaaaatcgccctttgggggggaaggatggattgttagtgtagacgatttggaagatata 34203 Query: 567 attggtggacatgtatggttgggtt 591 || || || ||||| ||||| |||| Sbjct: 34204 ataggaggccatgtgtggttaggtt 34228
>gb|AY297810.1| Pyrus communis PSII CP43 gene, partial cds; chloroplast gene for chloroplast product Length = 606 Score = 587 bits (296), Expect = e-164 Identities = 443/497 (89%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 159 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 160 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttcctcacctagct 219 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || |||||||||| || ||||| |||||||| Sbjct: 220 actctaggttggggggtaggtccgggtggggaagttctagacacctttccgtactttgtg 279 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 280 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 339 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 340 cttctgggacccgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 399 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 400 agaaataaaatgactacaattttgggtattcacttaatcttgttaggtctgggtgctttt 459 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| |||||||||||||||||||| || Sbjct: 460 cttctagtattcaaggctctttattttgggggtgtatatgatacctgggctccgggcggg 519 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||| Sbjct: 520 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattgtatttggttattta 579 Query: 507 ctaaaatctccttttgg 523 |||||||| || ||||| Sbjct: 580 ctaaaatccccctttgg 596
>gb|AF239787.1| Rheum x cultorum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2178 Score = 587 bits (296), Expect = e-164 Identities = 498/573 (86%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1096 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 1155 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||||||| |||||||||||||| || ||||||||||| ||| | ||| Sbjct: 1156 catttcgtaccagaaaagccgatgtatgaacaaggattaattttacttccccacctcgct 1215 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || ||||| |||| |||||||||||||||||| Sbjct: 1216 actctaggttggggggtgggccctggtggggaagttatagacacttttccatactttgta 1275 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| |||||||||| ||||| || ||||| ||||| |||||||| || Sbjct: 1276 tcgggagtacttcacttaatttcctcggcagtattgggctttggtgggatttatcatgca 1335 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||| || ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 1336 cttctgggccctgagactcttgaggaatcttttccattcttcggttatgtatggaaagat 1395 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1396 agaaataaaatgaccacaattttgggtattcacttaatcttgttaggtctaggtgctttt 1455 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 | | ||| |||| ||| ||| | || || |||||||||||||||| || Sbjct: 1456 cytyywgtattcaaagctatttttggggggggcatatatgatacctgggctccaggaggg 1515 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 1516 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 1575 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| ||||||||||||||||| ||||||||||| || || ||||| ||||||||| Sbjct: 1576 ctaaaatcgccttttgggggagaaggatggattgttagcgtggacgatttggaagatata 1635 Query: 567 attggtggacatgtatggttgggttttatttgt 599 || || |||||||||||||| |||| ||||||| Sbjct: 1636 atcggaggacatgtatggttaggttctatttgt 1668
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 581 bits (293), Expect = e-162 Identities = 488/558 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 32675 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggct 32734 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 32735 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 32794 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| |||||||||||||||||| Sbjct: 32795 actctaggttggggggtaggccctggcggggaagttatagacacttttccatactttgta 32854 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| ||||||| || || || || ||||| ||||| |||||||| || Sbjct: 32855 tcgggagtacttcacttaatttcgtcggccgtattgggctttggtggtatttatcatgca 32914 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| |||| || || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 32915 cttttgggccctgaaactcttgaagaatcttttccattcttcggttatgtgtggaaagat 32974 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||||| Sbjct: 32975 agaaataaaatgaccacaattttgggcattcacttaatcttgttaggtataggcgctttt 33034 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 33035 cttctagtattcaaggctctttattttgggggcgtatatgatacatgggctcccggaggt 33094 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| | ||||||||||| ||| |||||||||||| |||| Sbjct: 33095 ggagatgtaagaaaaattaccaacgtcacccttagtccaagtattatatttggttgttta 33154 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 33155 ctaaaatcgccttttggaggagaagggtggattgttagtgtagacgatttggaagatata 33214 Query: 567 attggtggacatgtatgg 584 || || || ||||||||| Sbjct: 33215 ataggggggcatgtatgg 33232
>gb|M36833.1|SPICPCHLA Spinach chloroplast 44 kD chlorophyII alpha apoprotein and 32 kD-like polypeptide associated with the photosystem II reaction with the photosystem II reaction center genes, complete cds Length = 2914 Score = 581 bits (293), Expect = e-162 Identities = 488/558 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1386 gtagcccatgccggattaatcgtattctgggccggagcaatgaacttatttgaagtggct 1445 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 1446 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 1505 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| |||||||||||||||||| Sbjct: 1506 actctaggttggggggtaggccctggcggggaagttatagacacttttccatactttgta 1565 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || ||||||||| ||||||| || || || || ||||| ||||| |||||||| || Sbjct: 1566 tcgggagtacttcacttaatttcgtcggccgtattgggctttggtggtatttatcatgca 1625 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| |||| || || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1626 cttttgggccctgaaactcttgaagaatcttttccattcttcggttatgtgtggaaagat 1685 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||||| Sbjct: 1686 agaaataaaatgaccacaattttgggcattcacttaatcttgttaggtataggcgctttt 1745 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 1746 cttctagtattcaaggctctttattttgggggcgtatatgatacatgggctcccggaggt 1805 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| | ||||||||||| ||| |||||||||||| |||| Sbjct: 1806 ggagatgtaagaaaaattaccaacgtcacccttagtccaagtattatatttggttgttta 1865 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1866 ctaaaatcgccttttggaggagaagggtggattgttagtgtagacgatttggaagatata 1925 Query: 567 attggtggacatgtatgg 584 || || || ||||||||| Sbjct: 1926 ataggggggcatgtatgg 1943
>gb|AY237102.1| Gossypium barbadense photosystem II CP43 protein (psbC) mRNA, partial cds; chloroplast gene for chloroplast product Length = 634 Score = 579 bits (292), Expect = e-162 Identities = 478/545 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 147 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| || |||||||| |||||||| |||||||| || ||||||||||| ||| ||||| Sbjct: 148 cattttgtcccagaaaaacccatgtacgaacaaggattaattttacttccccacctagct 207 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||| ||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 208 actctaggctggggggtaggtcctggcggagaagttatagacacctttccatactttgta 267 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| || || || ||||| || || |||||||| || Sbjct: 268 tctggagtacttcacttaatttcctctgctgtattgggctttggcggtatttatcatgca 327 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 328 cttctgggacctgaaactcttgaagaatcttttccatttttcggttatgtatggaaagat 387 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 388 agaaataaaatgaccacaattttgggtattcacttaattttgctaggtataggtgctttt 447 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||| ||||||||||| || Sbjct: 448 cttctagtattcaaggctctttattttgggggcgtatacgatacctgggctccgggaggg 507 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 508 ggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttattta 567 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 568 ctaaaatcgccctttggaggcgaagggtggattgttagtgtggacgatttggaagatata 627 Query: 567 attgg 571 ||||| Sbjct: 628 attgg 632
>gb|AY239299.1| Gossypium barbadense photosystem II CP43 protein (psbC) mRNA, partial cds; chloroplast gene for chloroplast product Length = 634 Score = 579 bits (292), Expect = e-162 Identities = 478/545 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 147 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| || |||||||| |||||||| |||||||| || ||||||||||| ||| ||||| Sbjct: 148 cattttgtcccagaaaaacccatgtacgaacaaggattaattttacttccccacctagct 207 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||| ||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 208 actctaggctggggggtaggtcctggcggagaagttatagacacctttccatactttgta 267 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| || || || ||||| || || |||||||| || Sbjct: 268 tctggagtacttcacttaatttcctctgctgtattgggctttggcggtatttatcatgca 327 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 328 cttctgggacctgaaactcttgaagaatcttttccatttttcggttatgtatggaaagat 387 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 388 agaaataaaatgaccacaattttgggtattcacttaattttgctaggtataggtgctttt 447 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||| ||||||||||| || Sbjct: 448 cttctagtattcaaggctctttattttgggggcgtatacgatacctgggctccgggaggg 507 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 508 ggagatgtaagaaaaattaccaacttgactcttagcccaagtgttatatttggttattta 567 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || ||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 568 ctaaaatcgccctttggaggcgaagggtggattgttagtgtggacgatttggaagatata 627 Query: 567 attgg 571 ||||| Sbjct: 628 attgg 632
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 579 bits (292), Expect = e-162 Identities = 493/565 (87%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 97243 gtagcccatgccggattaatagtattctgggccggagcaatgaacctatttgaagtcgct 97302 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 97303 catttcgtacccgagaagcccatgtatgaacaaggattaattttacttccccatctagct 97362 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || |||||||||||||| Sbjct: 97363 actctaggttggggggtaggtcctggaggggaagttatagacacctttccatactttgtc 97422 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| ||||||| || ||||| || ||||| || || |||||||| || Sbjct: 97423 tctggagtacttcacttaatttcttctgcagtattgggctttggcggtatttatcatgca 97482 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 97483 cttctgggacctgagactcttgaagaatcttttcctttctttggttatgtatggaaagat 97542 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||| Sbjct: 97543 agaaataaaatgactactattttaggtattcacttaattttgttagggataggggctttt 97602 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | |||||| ||||||||| ||| |||||||||||||||| || Sbjct: 97603 cttctagtatttaaggcttcttattttggaggtatatatgatacctgggctccaggaggg 97662 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||| || ||||||||||| ||| ||||||| ||||||||| Sbjct: 97663 ggggatgtaagaaaaattaccaacttaacccttagtccaagtattatattgggttattta 97722 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| Sbjct: 97723 ctaaaatctccttttgggggagaggggtggattgttagtgtggacgatttggaagacata 97782 Query: 567 attggtggacatgtatggttgggtt 591 ||||| || |||||||||||||||| Sbjct: 97783 attggagggcatgtatggttgggtt 97807
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 579 bits (292), Expect = e-162 Identities = 493/565 (87%) Strand = Plus / Minus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27281 gtagcccatgctggattaatagtattctgggccggagcaatgaacctatttgaagtggct 27222 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| ||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 27221 cattttgtacccgagaagcccatgtatgaacaaggcttaattttacttccccatctagct 27162 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || | ||| |||| || || ||||||||||| Sbjct: 27161 actctaggttggggggtcggtcctgggggagaggttatagacaccttcccatactttgtt 27102 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| || || ||||| || || || |||||||| || Sbjct: 27101 tctggagtacttcacttaatttcctctgcggtattaggatttggcggtatttatcatgca 27042 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 27041 cttctgggacctgagactcttgaagaatcttttccatttttcggttatgtatggaaagat 26982 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 ||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 26981 agaaataaaatgactaccattttgggtattcacttaatcttgttaggtataggggctttt 26922 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| |||||||| ||||||||| ||| |||||||||| ||||| || Sbjct: 26921 cttctagtattcaaggcttcttattttgggggtatatatgatacttgggctcccggggga 26862 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 26861 ggagatgtaagaaaaattaccaatttgacccttagtccaagtattatatttggttattta 26802 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| |||||||||||||| ||||||||||||||||| || ||||| ||||| ||| Sbjct: 26801 ctaaaatcaccttttgggggagaggggtggattgttagtgtggacgatttggaagacata 26742 Query: 567 attggtggacatgtatggttgggtt 591 ||||| ||||||||||||||||||| Sbjct: 26741 attgggggacatgtatggttgggtt 26717
>gb|AF239789.1| Sagittaria latifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2185 Score = 577 bits (291), Expect = e-161 Identities = 504/580 (86%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1090 gtagcccatgccggattaattgtattttgggctggagcaatgaacctatttgaagtggcc 1149 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct: 1150 catttcgtaccagaaaaaccaatgtatgaacaagggttgattttacttccccatctagct 1209 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||| ||||||||||| || |||| |||| || ||||| |||||||| Sbjct: 1210 actctaggctggggagtaggaccggggggggaagtgatagacacctttccctactttgtg 1269 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| || ||||||||||| ||||| |||||||| || Sbjct: 1270 tctggggtacttcacttaatttcctctgcggtcttaggctttggtggtatttatcatgca 1329 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||| || || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1330 cttcttgggccggaaactcttgaagaatcttttccattctttggttatgtatggaaagat 1389 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| || ||| | |||||||||||||||||||||||| |||| |||||| Sbjct: 1390 agaaataaaatgaccacgattctcggtattcacttaattttgttaggtataggcgctttt 1449 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| | || |||||||||||||| || ||||||||||||||||| || Sbjct: 1450 cttctagtatttaaagctctttattttggtggcgtatatgatacctgggctcccgggggg 1509 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| || |||||||| || ||||||||||||||||||||| Sbjct: 1510 ggagatgtaagaaaaataaccaacttaacccttagcccaagtgttatatttggttattta 1569 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||| |||||||||||||| ||||| |||||||| ||||| || ||||||||||||||| Sbjct: 1570 ttaaagtctccttttgggggcgaaggatggattgtcagtgtggacgatttagaagatata 1629 Query: 567 attggtggacatgtatggttgggttttatttgtgtatttg 606 ||||| || ||||||||||| |||| |||||| |||||| Sbjct: 1630 attggggggcatgtatggttaggttccatttgtatatttg 1669
>gb|AF123815.1|AF123815 Cabomba caroliniana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 575 bits (290), Expect = e-161 Identities = 488/559 (87%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1095 catgccggattaatcgtattctgggctggagcaatgaacctatttgaggtggctcatttc 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| || ||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1155 gtaccggagaagcctatgtatgaacaaggattgattttacttccccatctagctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 ||||||||||| || || ||||| |||| || |||||||||||||||||||| Sbjct: 1215 ggttggggagtgggtcctggtggggaagttgtagacacctttccatactttgtatctgga 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| |||||||||| ||||| ||||||| || || |||||||| |||||||| Sbjct: 1275 gtacttcacttaatttcctctgcagtactaggctttggcggtatttatcatgcgcttctt 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 || || ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 1335 ggcccggagactcttgaggaatcctttccattcttcggttatgtatggaaagatagaaat 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| || |||||||| ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 1395 aaaatgaccaccattttggggattcacttaatcttgttaggtctaggcgcttttctccta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || ||||||||||||||||||| || ||||||||||||||||| ||| ||| Sbjct: 1455 gtgttcaaggctctttattttgggggcgtatatgatacctgggctcctggtgggggggat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 ||||||| ||||||||| ||||||||||| || || |||||||||||||||||||||| Sbjct: 1515 gtaagaagaattaccaacttgacccttagcccaagcattatatttggttatttactaaag 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1575 tctccttttggaggagaagggtggattgttagtgtggacgatttagaagatataattggg 1634 Query: 573 ggacatgtatggttgggtt 591 |||||||||||||| |||| Sbjct: 1635 ggacatgtatggttaggtt 1653
>gb|AY705207.1| Duckeella adolphii PsbC (psbC) gene, partial cds; chloroplast Length = 1396 Score = 573 bits (289), Expect = e-160 Identities = 490/562 (87%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 334 acgtagctcatgccggattaatcatattctgggccggagcaatgaacctatttgaagtgg 393 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 394 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacttccgcacttag 453 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||| ||||| ||||| ||||| ||| ||||| | ||||| ||||||||||||| Sbjct: 454 ctaccctagggtggggggtaggtccagggggagaagttatcgatacctttccatactttg 513 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 |||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 514 tatctggcgtacttcatttaatctcctctgcagtcttaggctttggtggtatttatcatg 573 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 574 cacttctaggacctgagactcttgaggaatcctttccattcttcggttatgtatggaaag 633 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 | ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 634 accgaaataaaatgactacaatcttgggtattcacttaattttattaggtataggtgctt 693 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||| ||||| || || ||||||||||| ||||| || Sbjct: 694 ttcttctagtactcaaggctaggtatttcggaggcgtatatgatacttgggcgcccggag 753 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| || ||||| ||||| || || || ||||||||||||| Sbjct: 754 ggggagatgtaagaaaaattactaacttgactcttagcccaagcgtgatatttggttatt 813 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 | ||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||| Sbjct: 814 tgctaaaatctccttttggaggagaaggatggattgttagtgtggacgatttagaagata 873 Query: 565 taattggtggacatgtatggtt 586 |||| || |||||||| ||||| Sbjct: 874 taatcggaggacatgtctggtt 895
>gb|AY705201.1| Cleistes sp. Chase O-430 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 571 bits (288), Expect = e-159 Identities = 498/572 (87%), Gaps = 1/572 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 338 cttggagctcacgtagctcatgcgggattaatcgtattctgggccggagcaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | ||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 398 tttgaagtgtctcattttgtacccgagaaacccatgtatgaacaaggattgattttactt 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||||||||||||||||| ||||| || || ||| ||||| | ||||||||| Sbjct: 458 ccacacttagctactctagggtggggggtcggtccagggggagaagttatcgatactttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||||||||| || ||||||| || ||||||||||| || || || Sbjct: 518 ccatactttgtatctggcgtactgcatttaatttcttctgcagtcttaggatttggcggt 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| || ||||| ||| |||| ||||||||||||||| || Sbjct: 578 atttatcatgcacttctaggacctgacactctcgaaaaatcctttccattctttggtnat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| ||||||||||||||||||| ||||| |||||| | ||||| |||||| Sbjct: 638 gtatggaaagatcgaaataaaatgactacaatcttggggattcacctcattttattaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||| Sbjct: 698 ctaggtgcttttcttctagtactcaaagctctttattttggaggcgtatatgatacttgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || |||||||||||||||||||| || |||||||| || || || ||| Sbjct: 758 gcacccggaggtggggatgtaagaaaaattaccaactttacccttagcccaagcgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 818 tttggttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 877 Query: 555 ttagaagatataattggtggacatgtatggtt 586 ||||||||||||||||| |||||||| ||||| Sbjct: 878 ttagaagatataattggaggacatgtctggtt 909
>gb|AY705177.1| Erythrorchis cassythoides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 571 bits (288), Expect = e-159 Identities = 502/577 (87%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 338 cttggagctcacgtagctcatgccggattaatcgtattctgggccggaggaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | |||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 398 tttgaagtgtctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacta 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || |||||||||||| |||||||||||||||| || ||||| |||| || || Sbjct: 458 ccccacttagctactttaggttggggagtaggcccggggggagaagttatagacaccctt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || ||||||||||| || |||||||| |||||||||| || |||| ||||| || ||| Sbjct: 518 ccttactttgtatcgggagtacttcatttaatttcctctgctttcttgggctttggcggc 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||| | || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 578 atttatcatgcacttttaggtcctgaaactcttgaagaatcctttcctttcttcggttat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 638 gtatggaaagatagaaataaaatgactaccattttgggcattcacttaattttattaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 698 ataggtgcttttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| |||||| |||||||||||||| |||||| |||| || ||||| ||| Sbjct: 758 gccccgggggggggagatgttagaaaaattaccaacttgacctttagcccaagtgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 818 tttggttatttactaaaatccccttttgggggagaaggatggattgttagcgtggatgat 877 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||| ||||| |||| Sbjct: 878 ttagaagatataattggaggacatgtttggttaggtt 914
>gb|AY705194.1| Epistephium parviflorum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 565 bits (285), Expect = e-158 Identities = 504/582 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggaggcatgaacctatttgaagtgt 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||| || || ||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttgctcccgcacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || || ||||| | ||||| ||||||||||||| Sbjct: 468 ctactctagggtggggggtcggcccggggggagaagttatcgatacctttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || || || |||||||||| || ||||||| || || || |||||||| | Sbjct: 528 tatctggagtcctccatttaatttcctctgctttcttaggttttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattctttggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 648 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 708 ttcttctagtactcaaggctctgtattttgggggcgtatatgatacctgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| |||||||||||||| || ||||| || || ||||| |||||||| |||| Sbjct: 768 ggggggatgtcagaaaaattaccaactttaccctcagcccaagtgtgatatttgggtatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 828 tactcaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtttggttaggttccatttgtatatttg 929
>gb|AY705178.1| Erythrorchis altissima PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1442 Score = 563 bits (284), Expect = e-157 Identities = 501/577 (86%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 338 cttggagctcacgtagctcatgccggattaatcgtattctgggccggaggaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | |||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 398 tttgaagtgtctcatttcgtaccagagaaacccatgtatgaacaaggattgattttacta 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 || ||||||||||||||||| ||||||||||| || ||||| |||| || || Sbjct: 458 ccccacttagctactctagggtggggagtaggcccggggggagaagttatagacaccctt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || ||||||||||| || |||||||| |||||||||| || |||| ||||| || ||| Sbjct: 518 ccttactttgtatcgggagtacttcatttaatttcctctgctttcttgggctttggcggc 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||| | || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 578 atttatcatgcacttttaggtcctgaaactcttgaagaatcctttcctttcttcggttat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 638 gtatggaaagattgaaataaaatgactaccattttgggtattcacctaattttattaggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 698 ataggtgcttttcttctagtactcaaggctctgtattttggaggcgtatatgatacctgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 ||||| |||||| |||||||||||||| |||||| |||| || ||||| ||| Sbjct: 758 gccccgggggggggagatgttagaaaaattaccaacttgacctttagcccaagtgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 |||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 818 tttggttatttactaaaatccccttttgggggagaaggatggattgttagcgtggatgat 877 Query: 555 ttagaagatataattggtggacatgtatggttgggtt 591 ||||||||||||||||| |||||||| ||||| |||| Sbjct: 878 ttagaagatataattggaggacatgtttggttaggtt 914
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 563 bits (284), Expect = e-157 Identities = 491/565 (86%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 33625 gtagcccatgccggattaatcgtattttgggccggagcaatgaatctatttgaagtggct 33684 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 33685 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 33744 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || ||||| ||||||||||||||||||||||| Sbjct: 33745 actctaggttggggggtgggtcctggtggggaagttatagatacttttccatactttgta 33804 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || |||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 33805 tccggagtacttcatttaatttcctctgcagtattgggctttggcggtatttatcatgca 33864 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| | || || ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 33865 cttttagggcctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 33924 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 33925 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 33984 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 33985 cttctagtattcaaggctctttattttgggggcgtatatgatacttgggctccgggagga 34044 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| ||||| ||||| || ||| | ||||||||||||||| Sbjct: 34045 ggagatgtaagaaaaataaccaacttgacgcttagcccaagtatcatatttggttattta 34104 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 34105 ctaaaatcgccctttgggggagaaggatggattgttagtgtagacgatttggaagatata 34164 Query: 567 attggtggacatgtatggttgggtt 591 || || || ||||||||||| |||| Sbjct: 34165 atcggaggccatgtatggttaggtt 34189
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 563 bits (284), Expect = e-157 Identities = 491/565 (86%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 27561 gtagcccatgccggattaatcgtattttgggccggagcaatgaatctatttgaagtggct 27620 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 27621 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 27680 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || ||||| ||||||||||||||||||||||| Sbjct: 27681 actctaggttggggggtgggtcctggtggggaagttatagatacttttccatactttgta 27740 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || |||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 27741 tccggagtacttcatttaatttcctctgcagtattgggctttggcggtatttatcatgca 27800 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| | || || ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 27801 cttttagggcctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 27860 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 27861 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 27920 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 27921 cttctagtattcaaggctctttattttgggggcgtatatgatacttgggctccgggagga 27980 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| ||||| ||||| || ||| | ||||||||||||||| Sbjct: 27981 ggagatgtaagaaaaataaccaacttgacgcttagcccaagtatcatatttggttattta 28040 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 28041 ctaaaatcgccctttgggggagaaggatggattgttagtgtagacgatttggaagatata 28100 Query: 567 attggtggacatgtatggttgggtt 591 || || || ||||||||||| |||| Sbjct: 28101 atcggaggccatgtatggttaggtt 28125
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 563 bits (284), Expect = e-157 Identities = 491/565 (86%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 33624 gtagcccatgccggattaatcgtattttgggccggagcaatgaatctatttgaagtggct 33683 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 33684 catttcgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 33743 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| || || || ||||| ||||||||||||||||||||||| Sbjct: 33744 actctaggttggggggtgggtcctggtggggaagttatagatacttttccatactttgta 33803 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || || |||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 33804 tccggagtacttcatttaatttcctctgcagtattgggctttggcggtatttatcatgca 33863 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||| | || || ||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 33864 cttttagggcctgagacgcttgaagaatcttttccattcttcggttatgtatggaaagat 33923 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 33924 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 33983 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 33984 cttctagtattcaaggctctttattttgggggcgtatatgatacttgggctccgggagga 34043 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||| ||||| ||||| ||||| || ||| | ||||||||||||||| Sbjct: 34044 ggagatgtaagaaaaataaccaacttgacgcttagcccaagtatcatatttggttattta 34103 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 34104 ctaaaatcgccctttgggggagaaggatggattgttagtgtagacgatttggaagatata 34163 Query: 567 attggtggacatgtatggttgggtt 591 || || || ||||||||||| |||| Sbjct: 34164 atcggaggccatgtatggttaggtt 34188
>gb|AY169971.1| Citrus limon photosystem II protein (psbC) gene, partial cds; chloroplast gene for chloroplast product Length = 615 Score = 561 bits (283), Expect = e-157 Identities = 433/488 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagcccatgctggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 180 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||| Sbjct: 181 catttcgtaccagaaaagcccatgtatgaacaaggattaattttacttccccacctagct 240 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||| ||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 241 actctaggctggggggtaggtcctggtggggaagttatagacacctttccatactttgta 300 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 301 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 360 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 361 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 420 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 421 agaaataaaatgaccacaattttgggtattcacctaatcttgttaggtataggtgctttt 480 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || || |||||||||||||| || Sbjct: 481 cttctagtattcaaggctctttattttgggggcgtgtatgatacctgggctccggggggg 540 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||| Sbjct: 541 ggagatgtaagaaaaattaccaacttgacccttagcccaagtgttatttttggttattta 600 Query: 507 ctaaaatc 514 |||||||| Sbjct: 601 ctaaaatc 608
>emb|AJ459487.1|ADE459487 Actinidia deliciosa chloroplast partial psbC gene for photosystem II protein, 574BP Length = 574 Score = 559 bits (282), Expect = e-156 Identities = 432/487 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 147 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 148 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 207 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 208 actctaggttggggggtaggtcccggtggggaagttatagacacctttccatactttgta 267 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 268 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 327 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 328 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 387 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 388 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 447 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 448 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 507 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 ||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 508 ggagatgtaagaaaaattaccaacttgacccttagcccaagtattatatttggttattta 567 Query: 507 ctaaaat 513 ||||||| Sbjct: 568 ctaaaat 574
>gb|DQ069645.1| Nuphar advena photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1275 Score = 551 bits (278), Expect = e-154 Identities = 444/503 (88%), Gaps = 1/503 (0%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 158 acgtggcccatgccggattaatcgtattctgggctggagcaatgaacctatttgaagtgg 217 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 218 ctcatttcgtaccggagaagcctatgtatgaacaaggattgattttacttccccatctag 277 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| || || || ||||| |||| || ||||||||||||| Sbjct: 278 ctactctaggttggggggtgggtcctggcggggaagttgtagacacctttccatactttg 337 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| ||||||||||||||||| ||||||| || || |||||||| | Sbjct: 338 tatctggagtacttcacttaatttcctccgcagtcctaggctttggcggtatttatcatg 397 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 398 cgcttcttggacccgagactcttgaagaatcctttccattcttcggttatgtatggaaag 457 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 458 atagaaataaaatgaccacaattttgggtattcacttaatcttgttaggtctaggcgctt 517 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| ||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 518 ttctcctagtgttcaaggctctttattttgggggcgtatatgatacctgggcccctggcg 577 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| ||||||||| ||||||||||| || ||| ||||||||||||||| Sbjct: 578 ggggagatgtaagaagaattaccaacttgacccttagcccaagtattatatttggttatt 637 Query: 505 t-actaaaatctccttttggggg 526 | |||||| ||||| |||||||| Sbjct: 638 taactaaagtctccctttggggg 660 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 661 ctaaagtctccctttgggggagaaggatggattgttagtgtggacgatttagaagatata 720 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||||||||| |||| Sbjct: 721 attggaggacatgtatggttaggtt 745
>dbj|AP006912.1| Saccharum spontaneum chloroplast gene for PSII 44kD protein, partial cds, strain: Jw385, clone: SJw-11kb Length = 411 Score = 551 bits (278), Expect = e-154 Identities = 330/350 (94%) Strand = Plus / Plus Query: 253 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 60 Query: 313 atgtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atgtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 120 Query: 373 gtctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacct 432 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 gtctaggtgcttttcttctagtactcaaggctctttattttggcggcgtatatgatacct 180 Query: 433 gggcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgtta 492 ||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 181 gggcccccggggggggggatgtaagaaaaattaccaatttgacccttagccccggtgtta 240 Query: 493 tatttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatg 552 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 241 tatttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggatg 300 Query: 553 atttagaagatataattggtggacatgtatggttgggttttatttgtgta 602 ||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 301 atttagaagatataattgggggacatgtatggttgggttccatttgtgta 350
>dbj|AP006911.1| Saccharum spontaneum chloroplast gene for PSII 44kD protein, partial cds, strain: Glagah, clone: SGl-11kb Length = 411 Score = 551 bits (278), Expect = e-154 Identities = 330/350 (94%) Strand = Plus / Plus Query: 253 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 60 Query: 313 atgtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atgtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 120 Query: 373 gtctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacct 432 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 gtctaggtgcttttcttctagtactcaaggctctttattttggcggcgtatatgatacct 180 Query: 433 gggcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgtta 492 ||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 181 gggcccccggggggggggatgtaagaaaaattaccaatttgacccttagccccggtgtta 240 Query: 493 tatttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatg 552 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 241 tatttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggatg 300 Query: 553 atttagaagatataattggtggacatgtatggttgggttttatttgtgta 602 ||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 301 atttagaagatataattgggggacatgtatggttgggttccatttgtgta 350
>dbj|AP006910.1| Saccharum officinarum chloroplast gene for PSII 44kD protein, partial cds, strain: Fiji40, clone: OFi-11kb Length = 411 Score = 551 bits (278), Expect = e-154 Identities = 330/350 (94%) Strand = Plus / Plus Query: 253 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 60 Query: 313 atgtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atgtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 120 Query: 373 gtctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacct 432 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 gtctaggtgcttttcttctagtactcaaggctctttattttggcggcgtatatgatacct 180 Query: 433 gggcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgtta 492 ||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 181 gggcccccggggggggggatgtaagaaaaattaccaatttgacccttagccccggtgtta 240 Query: 493 tatttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatg 552 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 241 tatttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggatg 300 Query: 553 atttagaagatataattggtggacatgtatggttgggttttatttgtgta 602 ||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 301 atttagaagatataattgggggacatgtatggttgggttccatttgtgta 350
>dbj|AP006909.1| Saccharum officinarum chloroplast gene for PSII 44kD protein, partial cds, strain: Badila, clone: OBa-11kb Length = 411 Score = 551 bits (278), Expect = e-154 Identities = 330/350 (94%) Strand = Plus / Plus Query: 253 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcatttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggtt 60 Query: 313 atgtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atgtatggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttag 120 Query: 373 gtctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacct 432 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 gtctaggtgcttttcttctagtactcaaggctctttattttggcggcgtatatgatacct 180 Query: 433 gggcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgtta 492 ||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 181 gggcccccggggggggggatgtaagaaaaattaccaatttgacccttagccccggtgtta 240 Query: 493 tatttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatg 552 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 241 tatttggttatttactaaaatccccttttgggggagaaggatggattgttagtgtggatg 300 Query: 553 atttagaagatataattggtggacatgtatggttgggttttatttgtgta 602 ||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 301 atttagaagatataattgggggacatgtatggttgggttccatttgtgta 350
>gb|AY705195.1| Epistephium subrepens PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 549 bits (277), Expect = e-153 Identities = 502/582 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggaggcatgaacctatttgaagtgt 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||| || || ||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttgctcccgcacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || || ||||| | ||||| ||||||||||||| Sbjct: 468 ctactctagggtggggggtcggcccggggggagaagttatcgatacctttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || || || |||||||||| || ||||||| || || || |||||||| | Sbjct: 528 tatctggagtcctccatttaatttcctctgctttcttaggttttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 648 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 708 ttcttctagtactcaaggctctgtattttgggggcgtatatgatacctgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| ||||| |||||||| || ||||| || || ||||| |||||||| |||| Sbjct: 768 ggggggatgtcagaaagattaccaactttaccctcagcccaagtgtgatatttgggtatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 828 tactcaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtttggttaggttccatttgtatatttg 929
>gb|AY705191.1| Epistephium sp. Chase O-432 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 549 bits (277), Expect = e-153 Identities = 502/582 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggaggcatgaacctatttgaagtgt 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||| || || ||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttgctcccgcacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || || ||||| | ||||| ||||||||||||| Sbjct: 468 ctactctagggtggggggtcggcccggggggagaagttatcgatacctttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || || || |||||||||| || ||||||| || || || |||||||| | Sbjct: 528 tatctggagtcctccatttaatttcctctgctttcttaggttttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 648 atagaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 708 ttcttctagtactcaaggctctgtattttgggggcgtatatgatacctgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| ||||| |||||||| || ||||| || || ||||| |||||||| |||| Sbjct: 768 ggggggatgtcagaaagattaccaactttaccctcagcccaagtgtgatatttgggtatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 828 tactcaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtttggttaggttccatttgtatatttg 929
>gb|AY116657.1| Trimenia moorei photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 549 bits (277), Expect = e-153 Identities = 487/562 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 1087 acgtagcccacgccggattaatcgtcttctgggccggagcaatgaacttatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||||||||| |||||||||||||| |||||||| ||||| ||| ||| Sbjct: 1147 ctcatttcgtaccagaaaagcctatgtatgaacaaggattgattttgcttcctcacctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||||||||| ||||| || ||||| |||| || ||||| ||||||| Sbjct: 1207 ctactctaggttggggggtaggtccgggcggggaagttatagacacctttccgtactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| |||||||||| |||||||||||||| || || |||||||| | Sbjct: 1267 tatctggagtacttcacttaatttcctctgcagtcttaggctttggcggtatttatcatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| || || ||||||||||||||||| |||||||| || || ||||| ||||||| Sbjct: 1327 cgcttctcgggcctgagactcttgaagaatcctttccatttttcggatatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||||| || |||||||||||||||||||| ||||||||| |||| || Sbjct: 1387 atagaaataaaatgaccaccattttgggtattcacttaatcttgttaggtataggcgccc 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| || ||||||||||||||||| || ||||||||||| ||||| || Sbjct: 1447 ttctcctagtgcttaaggctctttattttgggggcgtatatgatacttgggctcccgggg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| |||||| || ||||||||||| || ||| | ||||||||||||| Sbjct: 1507 ggggagatgtaagaagaattactaacttgacccttagcccaagtatcatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||| Sbjct: 1567 tactaaaatccccctttgggggagagggttggattgttagtgtggacgatttagaagata 1626 Query: 565 taattggtggacatgtatggtt 586 ||||||| |||||||||||||| Sbjct: 1627 taattggaggacatgtatggtt 1648
>gb|AY705186.1| Vanilla inodora PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1383 Score = 547 bits (276), Expect = e-152 Identities = 481/556 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 332 acgtagctcatgccggattaatcgtattctgggccggaggaatgaacctatttgaagtgg 391 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 |||||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct: 392 cccatttcgtaccagagaaacccatgtatgaacaaggattgattttactcccgcacttag 451 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||||| || ||||| | || || ||||||||||||| Sbjct: 452 ctactctagggwggggagtaggtccggggggagaagttatcgacacctttccatactttg 511 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| |||||||| ||||||||||||| ||||||||| || || |||||||| | Sbjct: 512 tatctggagtacttcatttaatttcctccgcttwcttaggctttggcggtatttatcatg 571 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 ||||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 572 cgcttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 631 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 632 atagaaataaaatgactacgattttggggattcacttaattttattaggcataggtgctt 691 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||| ||| |||||||| | ||||||||||||||||| || Sbjct: 692 ttcttctagtactcaaggatctgtattttggaagcgtatatgatacctgggcacccggag 751 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||| |||||||||||||| ||||||||||| || | || || ||||| |||| Sbjct: 752 ggggagatgtcagaaaaattaccaacttgacccttagcccaggcgtgatgtttgggtatt 811 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 ||||||||||||||| |||||||||||| |||||||||| ||| || ||||| ||||||| Sbjct: 812 tactaaaatctccttctgggggagaaggatggattgttantgtggacgatttggaagata 871 Query: 565 taattggtggacatgt 580 ||||| | |||||||| Sbjct: 872 taatttggggacatgt 887
>gb|AY705193.1| Epistephium lucidum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 541 bits (273), Expect = e-151 Identities = 501/582 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggaggcatgaacttatttgaagtgt 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||| || || ||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttgctcccgcacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || || ||||| | ||||| ||||||||||||| Sbjct: 468 ctactctagggtggggggtcggcccggggggagaagttatcgatacctttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || || || |||||||||| || ||||||| || || || |||||||| | Sbjct: 528 tatctggagtcctccatttaatttcctctgctttcttaggttttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 648 atagaaataaaatgactacaattttgggtattcacttaattttattaggcataggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 708 ttcttctagtactcaaggctctgtattttgggggcgtatatgatacctgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| |||||||||||||| || ||||| || || ||||| |||||||| |||| Sbjct: 768 ggggggatgtcagaaaaattaccaactttaccctcagcccaagtgtgatatttgggtatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 828 tactcaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtttggttaggttccatttgtatatttg 929
>gb|AY705192.1| Epistephium sp. Chase O-433 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 541 bits (273), Expect = e-151 Identities = 501/582 (86%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 348 acgtagctcatgccggattaatcgtattctgggccggaggcatgaacctatttgaagtgt 407 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||| || ||||||||||||||||| |||||||| || || ||||||| Sbjct: 408 ctcatttcgtaccagagaaacccatgtatgaacaaggattgattttgctcccgcacttag 467 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||| || || || ||||| | ||||| ||||||||||||| Sbjct: 468 ctactctagggtggggggtcggcccggggggagaagttatcgatacctttccatactttg 527 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| || || || |||||||||| || ||||||| || || || |||||||| | Sbjct: 528 tatctggagtcctccatttaatttcctctgctttcttaggttttggcggtatttatcatg 587 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||||| ||||| || |||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 588 cacttctaggacctgaaactcttgaagaatcctttccattcttcggttatgtatggaaag 647 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 648 atagaaataaaatggctacaattttgggtattcacttaattttattaggtataggtgctt 707 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 708 ttcttctagtactcaaggctctgtattttgggggcgtatatgatacctgggcacccggag 767 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||| ||||| |||||||| || ||||| || || ||||| |||||||| |||| Sbjct: 768 ggggggatgtcagaaagattaccaactttaccctcagcccaagtgtgatatttgggtatt 827 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 828 tactcaaatctccttttgggggagaagggtggattgttagtgtggacgatttagaagata 887 Query: 565 taattggtggacatgtatggttgggttttatttgtgtatttg 606 ||||||| |||||||| ||||| |||| |||||| |||||| Sbjct: 888 taattggaggacatgtttggttaggttccatttgtatatttg 929
>gb|AY705202.1| Cleistes sp. Thomas 12975 PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 531 bits (268), Expect = e-148 Identities = 488/564 (86%), Gaps = 2/564 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 338 cttggagctcacgtagctcatgcgggattaatcgtattctgggccggatcaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | ||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 398 tttgaagtgtctcattttgtacccgagaaacccatgtatgaacaaggattgattttactt 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 ||||||||||||||| |||| |||| || || ||| ||||| | ||||||||| Sbjct: 458 ccacacttagctactttaggatgggaggtcggtccagggggagaagttatcgatactttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 ||||||||||||||||||||||| || |||| || || ||||||||||| || || || Sbjct: 518 ccatactttgtatctggcgtactgcatttaatctcttctgcagtcttaggatttggcggt 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 578 atttatcatgcacttctaggacctgaaactcttgaagaatcctttccatt-tttggttat 636 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| ||||||||||||||||||| |||||||||||| |||| | || ||| Sbjct: 637 gtatggaaagatcgaaataaaatgactacaatcttgggtattcacctaatctnattgggt 696 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 |||||||||||||||||||||||||| ||||||| |||||| || ||||||||||| ||| Sbjct: 697 ctaggtgcttttcttctagtactcaaagctctttcttttggaggcgtatatgatacttgg 756 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || ||||||||||||||||||||| || |||||||| || || |||||| Sbjct: 757 gcacccggagggggagatgtaagaaaaattaccaactttacccttagcccaagcgttata 816 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 817 tttagttatttactaaaatctccttttgggggagaaggatggattgttagtgtggacgat 876 Query: 555 ttagaagatataattggtggacat 578 ||||||||||||||||| |||||| Sbjct: 877 ttagaagatataattggaggacat 900
>gb|AY705203.1| Cleistes rosea PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 521 bits (263), Expect = e-145 Identities = 486/564 (86%), Gaps = 1/564 (0%) Strand = Plus / Plus Query: 16 cttggagct-acgtagcccatgccggattaatcgtattctgggccggagcaatgaaccta 74 ||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 338 cttggagctcacgtagctcatgcgggattaatcgtattctgggccggatcaatgaaccta 397 Query: 75 tttgaagtggcccatttcgtaccagaaaagcccatgtatgaacaagggttgattttactt 134 ||||||||| | ||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 398 tttgaagtgtctcattttgtacccgagaaacccatgtatgaacaaggattgattttactt 457 Query: 135 ccacacttagctactctaggttggggagtagggccannnnnnnaagttctagatactttt 194 |||||||||||||||||||| ||||| || || || ||||| | ||||||||| Sbjct: 458 ccacacttagctactctaggatggggggtcggtcccgggggagaagttatcgatactttt 517 Query: 195 ccatactttgtatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggc 254 || |||||||| ||||||||||| || ||||||| || ||||||||||| || || || Sbjct: 518 ccgtactttgtgtctggcgtactgcatttaatttcttctgcagtcttaggatttggcggt 577 Query: 255 atttatcacgcgcttctgggacccgagactcttgaagaatcttttccattctttggttat 314 |||||||| || ||||| ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 578 atttatcatgcacttctaggacctgaaactcttgaagaatcctttccattctttggttat 637 Query: 315 gtctggaaagatagaaataaaatgactacaattttgggtattcacttaattttgttaggt 374 || ||||||||| ||||||||||||||||||| |||||||||||| ||||||| || ||| Sbjct: 638 gtatggaaagatcgaaataaaatgactacaatcttgggtattcacctaattttattgggt 697 Query: 375 ctaggtgcttttcttctagtactcaaggctctttattttggcggtgtatatgatacctgg 434 ||||||||||||||||| || ||||| ||||||| ||||| || ||||||||||| ||| Sbjct: 698 ctaggtgcttttcttctggtgctcaaagctctttcttttgaaggcgtatatgatacttgg 757 Query: 435 gcccctnnnnnnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttata 494 || || ||||||||||| ||||||||| || |||||||| || || || ||| Sbjct: 758 gcacccggagggggagatgtaagaagaattaccaactttacccttagcccaagcgtgata 817 Query: 495 tttggttatttactaaaatctccttttgggggagaagggtggattgttagtgtagatgat 554 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 818 tttggttatttactaaaatctccttttggaggagaaggatggattgttagtgtggacgat 877 Query: 555 ttagaagatataattggtggacat 578 ||||||||||||||||| |||||| Sbjct: 878 ttagaagatataattggaggacat 901
>emb|AJ459488.1|ADE459488 Actinidia deliciosa chloroplast partial psbC gene for photosystem II protein, 541BP Length = 541 Score = 517 bits (261), Expect = e-143 Identities = 402/454 (88%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggct 147 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 ||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct: 148 cattttgtaccagagaagcctatgtatgaacaaggattaattttacttccccacctagct 207 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||| ||||| || ||||| |||| || ||||||||||||||| Sbjct: 208 actctaggttggggggtaggtcctggtggggaagttatagacacctttccatactttgta 267 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 ||||| ||||||||| |||||||||| ||||| || ||||| || || |||||||| || Sbjct: 268 tctggagtacttcacttaatttcctctgcagtattgggctttggcggtatttatcatgca 327 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 328 cttctgggacctgagactcttgaagaatcttttccattcttcggttatgtatggaaagat 387 Query: 327 agaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctttt 386 |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 388 agaaataaaatgaccacaattttaggtattcacttaatcttgttaggtataggtgctttt 447 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||| ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 448 cttctagtattcaaggctctttattttgggggcgtatatgatacctgggctcccggaggg 507 Query: 447 nnagatgtaagaaaaattaccaatttgaccctta 480 ||||||||||||||||||||| |||||||||| Sbjct: 508 ggagatgtaagaaaaattaccaacttgaccctta 541
>gb|AF462403.1| Cycas revoluta photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 472 bits (238), Expect = e-130 Identities = 487/575 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| Sbjct: 1087 acgtagcccatgccggattaattgtattctgggctggagcaatgaacttatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| ||||||||||| || |||| | || ||||||||||| |||| Sbjct: 1207 ctactctaggatggggagtaggtcctggtggggaagtcgtggacacttttccatattttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctctgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | |||||||| ||||| || ||||| ||||||| ||||||||||| ||||||| Sbjct: 1327 cacttataggacccgaaactctcgaggaatcccttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||||| |||||||| |||||||| ||||||||| |||| ||| ||||| | ||||||| Sbjct: 1387 atagaagcaaaatgaccacaattttaggtattcacctaatcttgctaggtgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| |||||||||||||||||||| ||| Sbjct: 1447 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggctcctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||||||||| || |||| ||||| || ||||||||||||||||||| Sbjct: 1507 gtggggatgtaagaaaaattacgaacctgactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || ||||||||||| || |||||||||||||| || || ||||||||| Sbjct: 1567 tactcgagtccccctttgggggagagggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggttttatttgt 599 ||||||| |||||||||||||| |||| ||||||| Sbjct: 1627 taattgggggacatgtatggttaggttctatttgt 1661
>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 470 bits (237), Expect = e-129 Identities = 299/319 (93%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 27 gtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcc 86 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 61552 gtagcccatgtcggattaat-gtattctgggccggagcaatgaacctatttgaagtggcc 61610 Query: 87 catttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagct 146 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61611 catttcgtaccagaaaggcccatgtatgaacaagggttgattttacttccacacttagct 61670 Query: 147 actctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgta 206 |||||||||||||||||||||||| ||||| ||||||||||||| |||||||| Sbjct: 61671 actctaggttggggagtagggccaggggag-aagttttagatacttttcctcactttgta 61729 Query: 207 tctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcg 266 || | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61730 tccagagtacttcacttaatttcctccacagtcttaggcttcggtggcatttatcacgcg 61789 Query: 267 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 61790 cttctgggacccgagactcttgaagaatcttttccattctttggttatgtatgaaaagat 61849 Query: 327 agaaataaaatgactacaa 345 ||||||||||||||||||| Sbjct: 61850 agaaataaaatgactacaa 61868
>gb|AF462400.1| Bowenia serrulata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 456 bits (230), Expect = e-125 Identities = 479/567 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 1207 ctactttaggatggggagtaggtcctggtggggaagtcgtggacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctctgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || |||||| ||||||| ||||||||||| ||||||| Sbjct: 1327 cccttatagggcccgaaactctcgaggaatctcttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1387 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1447 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggcccctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 ||||||||||| |||||| || | || ||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaagaattacgaacctaactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || |||||||| || || |||||||||||||| || || ||||||||| Sbjct: 1567 tactcgagtcaccctttgggggcgagggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattgggggacatgtatggttaggtt 1653
>gb|AF462405.1| Encephalartos barteri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 448 bits (226), Expect = e-122 Identities = 478/567 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || | | Sbjct: 1147 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctgg 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 1207 ctactttaggatggggagtaggtcctggtggggaagtcgtggacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||||||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctccgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || ||||| ||||||| ||||||||||| ||||||| Sbjct: 1327 cccttatagggcccgaaactctcgaggaatcccttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1387 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1447 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggcccctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| || || ||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaaaaattacgaacccaactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || |||||||| || || |||||||||||||| || || ||||||||| Sbjct: 1567 tactcgagtcaccctttgggggtgagggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattgggggacatgtatggttaggtt 1653
>gb|AF462404.1| Dioon purpusii photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 1872 Score = 448 bits (226), Expect = e-122 Identities = 478/567 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 776 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 835 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 836 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 895 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 896 ctactttaggatggggagtaggtcctggtggggaagtcgtggacacttttccatactttg 955 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 956 tatctggggtacttcacttgatttcctctgcagttctagggttcggtggtatttaccatg 1015 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || ||||| ||||||| ||||||||||| ||||||| Sbjct: 1016 cacttatagggcccgaaactctcgaggaatcccttccattttttggttatgtatggaaag 1075 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1076 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1135 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 1136 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggcccccggtg 1195 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 1196 gtggagatgtaagaaaaattacgaacctaactcttagcccgagtgttatatttggttatt 1255 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || |||||||| || || |||||||||||||| || || ||||||||| Sbjct: 1256 tactcgagtcaccctttgggggtgagggatggattgttagtgtggacaatctagaagata 1315 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1316 taattgggggacatgtatggttaggtt 1342
>gb|AF462402.1| Ceratozamia miqueliana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2183 Score = 448 bits (226), Expect = e-122 Identities = 478/567 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 1207 ctactttaggatggggagtaggccctggtggggaagtcgtggacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctctgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || ||||| ||||||| ||||||||||| ||||||| Sbjct: 1327 cacttatagggcccgaaactctcgaggaatcccttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1387 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1447 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggcccctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||| ||||| || || ||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaaagattacgaacccaactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || ||||||||||| || || |||||||||||||| || || ||||||||| Sbjct: 1567 tactcgagtcaccttttgggggtgagggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattgggggacatgtatggttaggtt 1653
>gb|AF188848.1|AF188848 Zamia furfuracea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 448 bits (226), Expect = e-122 Identities = 478/567 (84%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | |||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccagaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 1207 ctactttaggatggggagtaggccctggtggggaagtcgtggacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctctgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || ||||| ||||||| ||||||||||| ||||||| Sbjct: 1327 cacttatagggcccgaaactctcgaggaatcccttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1387 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1447 ttcttctagtgctcaaggctttgtattttggaggtgtatatgatacctgggcccctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||| ||||| || || ||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaaagattacgaacccaactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || |||||||| || || |||||||||||||| || || ||||||||| Sbjct: 1567 tacttgagtccccctttgggggtgagggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattgggggacatgtatggttaggtt 1653
>gb|AF239793.1| Sciadopitys verticillata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 448 bits (226), Expect = e-122 Identities = 472/559 (84%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 ||||| ||||| || ||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1095 catgctggattgattgtattctgggccggagcaatgaatttatttgaagtggctcatttt 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1155 gtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctagctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 |||||||||||||| || || || | || ||||||||||||||||||||||| Sbjct: 1215 ggttggggagtaggtcctggtggggaaattgttgacacttttccatactttgtatctggg 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| || ||||| ||||| || ||||| |||||||| || || | Sbjct: 1275 gtacttcacttaatttcttctgcagttttaggttttggtggtatttatcatgcactcatc 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 |||||||| ||| | |||||||||||||| || ||||||||||| ||||||||||| || Sbjct: 1335 ggacccgaaactttagaagaatcttttcctttttttggttatgtatggaaagataggaac 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| |||||||| ||||||||| |||| ||||||||| | ||||||||||||| | Sbjct: 1395 aaaatgaccacaattttaggtattcacctaatcttgttaggtgttggtgcttttcttcca 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || |||||||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 1455 gtgttcaaggctttttattttggcggtgtatatgatacctgggctcccggcggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 |||||||||||||| || |||| |||| ||| ||||| ||||||||||||||||| ||| Sbjct: 1515 gtaagaaaaattacgaacctgacacttaatccaagtgtcatatttggttatttacttaaa 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 ||||||||||| ||||| || ||||| ||||| || || || |||||||||||||||| Sbjct: 1575 tctccttttggaggagagggatggatcgttagcgtggacaatctagaagatataattgga 1634 Query: 573 ggacatgtatggttgggtt 591 |||||| ||||||| |||| Sbjct: 1635 ggacatatatggttaggtt 1653
>gb|AF462408.1| Stangeria eriopus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 432 bits (218), Expect = e-118 Identities = 476/567 (83%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggccggagcaatgaacctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcatttcgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || |||| | || |||||||||||||||| Sbjct: 1207 ctactttaggatggggagtaggccctggtggagaagtcgtggacacttttccatactttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||| | |||||||| ||||| |||| |||||||| ||||| || | Sbjct: 1267 tatctggggtacttcacttgatttcctctgcagttctaggtttcggtggtatttaccatg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | ||| | || ||||| ||||| || ||||| ||||||||||||||||||| ||||||| Sbjct: 1327 cacttatagggcccgaaactctcgaggaatcccttccattctttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| | |||||||| |||||||||||||||||| |||| ||| |||| | ||||||| Sbjct: 1387 ataggagcaaaatgaccacaattttgggtattcacctaatcttgctaggcgttggtgctt 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||||||||| || |||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1447 ttcttctagtgctaaaggctttgtattttggaggtgtatatgatacctgggcccctggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||| ||| | || || ||||| || ||||||||||||||||||| Sbjct: 1507 gtggagatgtaagaaagattgcgaacccaactcttagcccaagtgttatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| | || || |||||||| ||||| |||||||||||||| || || ||||||||| Sbjct: 1567 tactcgagtcaccctttgggggtgaaggatggattgttagtgtggacaatctagaagata 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| || ||||||||||| |||| Sbjct: 1627 taattggggggcatgtatggttaggtt 1653
>gb|AF528919.1| Agathis robusta photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2222 Score = 424 bits (214), Expect = e-115 Identities = 469/559 (83%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1095 catgccggattaattgtattctgggccggagcaatgaacctatttgaagtggctcatttt 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| |||||||| |||||||||||||| |||||||||||||| || |||| |||||| Sbjct: 1155 gtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctagccactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 || |||||||| || || || || | ||||||||||||||||||||||| || Sbjct: 1215 ggatggggagtcggtcctggtggggaaattgtggatacttttccatactttgtatccgga 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| || ||||| ||||| || ||||| |||||||| || || | Sbjct: 1275 gtacttcacttaatttcttctgcagttttaggttttggtggtatttatcatgcactcatc 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 ||||| || ||| | |||||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 1335 ggacctgaaactttggaagaatcctttccattttttggttatgtatggaaagataggaac 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| |||||||||||||||||| |||| ||| ||||| ||||||||||||||| Sbjct: 1395 aaaatgaccacaattttgggtattcacctaatcttgctaggtgctggtgcttttcttcta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || |||||||| | ||||| ||||||||||||||||| ||||| || |||| Sbjct: 1455 gtgttcaaggctttgtatttcggcggtgtatatgatacttgggctcccggcggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 |||||||||||||| || || || |||| || ||||||||||||||||||||||| || Sbjct: 1515 gtaagaaaaattacgaacttaactcttaacccaagtgttatatttggttatttacttaag 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 || |||||||| ||||| || ||||| ||||| ||||| || |||||||||||||||| Sbjct: 1575 tccccttttggaggagagggatggatcgttagcgtagacaatctagaagatataattgga 1634 Query: 573 ggacatgtatggttgggtt 591 |||||||||||||| |||| Sbjct: 1635 ggacatgtatggttaggtt 1653
>gb|AF525948.1| Taxus brevifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2207 Score = 410 bits (207), Expect = e-111 Identities = 470/560 (83%), Gaps = 2/560 (0%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1118 catgccggattaattgtattctgggctggagcaatgaatctatttgaagtggctcatttt 1177 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||| | |||||||| |||||||||||||| |||||||||||||| || |||||||| || Sbjct: 1178 gtatcggaaaagcctatgtatgaacaaggattgattttacttccccatctagctacttta 1237 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 || |||||||| || || || || | || |||||||| || ||||||||||| Sbjct: 1238 ggatggggagtcggtcctggtggggaaattgtggacacttttccctattttgtatctggg 1297 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| || ||||| ||||| || ||||| ||||||||||| || | Sbjct: 1298 gtacttcacttaatttcttctgcagttttaggttttggtggtatttatcacgcactaatc 1357 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 |||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1358 ggacccgaaactttagaagaatcttttccattttttggttatgtctggaaagatagaaat 1417 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 ||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 1418 aaaatgactacaattttaggtattcacttaattttgctaggtgttggtgcttttcttcta 1477 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || |||||||| | |||||||| || |||||||||||||||| ||| |||| Sbjct: 1478 gtcttcaaggctttgtattttggtggcatatatgatacctgggctcctggcggtggagat 1537 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagt-gttatatttggttatttactaaa 511 ||||||||||||| || | || |||| |||||| | ||||||||||||||| || || Sbjct: 1538 gtaagaaaaattatgaaccttacgctta-acccagtggctatatttggttatttgctcaa 1596 Query: 512 atctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattgg 571 ||||||||||| ||||| || ||||||||||| || || || ||||||||||||| || Sbjct: 1597 gtctccttttggaggagagggatggattgttagcgtggacaatctagaagatataatcgg 1656 Query: 572 tggacatgtatggttgggtt 591 |||||||||||||| |||| Sbjct: 1657 aggacatgtatggttaggtt 1676
>gb|AF462407.1| Podocarpus chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2198 Score = 408 bits (206), Expect = e-111 Identities = 467/559 (83%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1095 catgccggattaattgtattctgggccggagcaatgaacctatttgaagtggctcatttt 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1155 gtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctagctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 || |||||||| || || || || | || ||||| || |||||||||||||| Sbjct: 1215 ggatggggagtcggtcctggtggggaaattgtggacactttcccctactttgtatctgga 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| |||||||| ||||| || ||||| |||||||| || || | Sbjct: 1275 gtacttcacttaatttcttccgcagttttaggttttggtggtatttatcatgcactcgtc 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 |||||||| ||| | || |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1335 ggacccgaaactttggaggaatcttttccattctttggttatgtatggaaagataggaac 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| |||||||||||||||||| |||| ||| ||||| || ||||| || ||| Sbjct: 1395 aaaatgaccacaattttgggtattcacctaatcttgctaggtgctggcgctttcctccta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || ||||||||| | ||||| || |||||||||||||||||||| || |||| Sbjct: 1455 gtgctcaaggctttgtatttcggtggtgtatatgatacctgggctcccggcggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 |||||||||||||| || | || |||| || ||||||||||||||||||||||| || Sbjct: 1515 gtaagaaaaattacaaacataacacttaacccaagtgttatatttggttatttacttaag 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 || |||||||| ||||| || ||||| ||||| ||||| || ||||||||||||| || Sbjct: 1575 tccccttttggaggagagggatggatcgttagcgtagacaatctagaagatataatcggg 1634 Query: 573 ggacatgtatggttgggtt 591 |||||||||||||| |||| Sbjct: 1635 ggacatgtatggttaggtt 1653
>gb|AY705208.1| Cyrtosia lindleyana clone 1 PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1015 Score = 406 bits (205), Expect = e-110 Identities = 473/565 (83%), Gaps = 2/565 (0%) Strand = Plus / Plus Query: 28 tagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggccc 87 |||| ||||||| |||||| |||||||||| ||| ||||||||||||||||||||| | Sbjct: 284 tagctcatgccgaattaattgtattctgggggagaggaatgaacctatttgaagtggctc 343 Query: 88 atttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagcta 147 |||| |||||| | || |||||||||||| |||| ||||||||||| || ||||||| || Sbjct: 344 attttgtaccaaagaaacccatgtatgaaaaaggattgattttactaccccacttagata 403 Query: 148 ctctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtat 207 ||||| | || |||||||| | ||||| |||| | |||||||||||||||| Sbjct: 404 ctctacggtgaggagtaggcctggggggagaagttatagacatctttccatactttgtat 463 Query: 208 ctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgc 267 |||| || ||||| ||||||| ||| |||| | ||| | |||||||||||| || | Sbjct: 464 ctggagtgcttcatttaatttcttcctttttctttgtctttgatggcatttatcatgcac 523 Query: 268 ttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagata 327 || | || || || |||||||||||||| ||||| |||||||||||| | |||||||||| Sbjct: 524 ttttaggtcctgacactcttgaagaatcctttcctttctttggttatttatggaaagata 583 Query: 328 gaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgc-tttt 386 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| Sbjct: 584 aaaataaaatgactacaattttgggtattcacttaattttattaggtataggtgcttttt 643 Query: 387 cttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnn 446 ||||||||||||| ||||| |||||||| || |||||||||||||||| || Sbjct: 644 attctagtactcaatgctctatattttggaggcatatatgatacctgggcacc-aggggc 702 Query: 447 nnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttattta 506 |||||| |||||||||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 703 ggagatgtcagaaaaattaccaacttgacccttagcccaagtgtgatatttggttattta 762 Query: 507 ctaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagatata 566 |||||||||||||||||||||||||| |||||| ||||||| || |||||||| ||||| Sbjct: 763 ctaaaatctccttttgggggagaaggatggatttttagtgtggaaaatttagaanatata 822 Query: 567 attggtggacatgtatggttgggtt 591 ||||| |||||||| ||||| |||| Sbjct: 823 attggaggacatgtttggttaggtt 847
>gb|AF528923.1| Cephalotaxus harringtonia photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 400 bits (202), Expect = e-108 Identities = 472/567 (83%) Strand = Plus / Plus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 1087 acgtagctcatgccggattaattgtattctgggctggagcaatgaatctatttgaagtgg 1146 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| ||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1147 ctcattttgtaccggaaaagcctatgtatgaacaaggattgattttacttccccatctag 1206 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 |||||||||| |||||||| || || || || | || |||||||| || |||| Sbjct: 1207 ctactctaggatggggagtcggtcctggtggtgaaattgtggacacttttccctattttg 1266 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||||||||||| || ||||| ||||| ||||| || |||||||||| Sbjct: 1267 tatctggggtacttcacctaatttcttcagcagttttaggtttcgggggtatttatcacg 1326 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | || | |||||||| ||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 1327 cactaatcggacccgaaactttagaagaatcttttccattttttggttatgtatggaaag 1386 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 |||| || |||||||| |||||||| ||||||||| |||| ||| ||||| ||||| | Sbjct: 1387 ataggaacaaaatgaccacaattttaggtattcacctaatcttgctaggtgctggtgcct 1446 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 |||| ||||| |||||||| |||||||||| || |||||||||||||||| || Sbjct: 1447 ttctcctagtgttcaaggctttttattttggtggcatatatgatacctgggctcccggtg 1506 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| || | || |||| ||| || |||||||||||||| Sbjct: 1507 gtggagatgtaagaaaaattacgaaccttacgcttaatccaggtactatatttggttatt 1566 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| || || |||||||| ||||| || |||||||||||||| ||| || |||||||| Sbjct: 1567 tactcaagtccccttttggaggagagggatggattgttagtgtggataatctagaagatc 1626 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 1627 taattggaggacatgtatggttaggtt 1653
>gb|AF528942.1| Thuja plicata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 385 bits (194), Expect = e-103 Identities = 470/567 (82%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1095 catgccggattaattgtattctgggctggagcaatgaatctatttgaagtggctcatttt 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| ||||| || |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1155 gtaccggaaaaacctatgtatgaacaaggtttgattttacttccccatctagctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 || |||||||| || || || || | || |||||||| || |||||||| || Sbjct: 1215 ggatggggagtcggtcctggtggggaaattgtggacacttttccctattttgtatccggg 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| || ||||| |||||||||||||| ||||||||||| || | Sbjct: 1275 gtacttcacttaatttcttctgcagttttaggcttcggtggtatttatcacgcactaatt 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 |||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 1335 ggacccgaaactttagaagaatcttttccattttttggttatgtatggaaagataggaac 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| |||||||| ||||||||| |||| ||| ||||| | ||||||||||| ||| Sbjct: 1395 aaaatgaccacaattttaggtattcacctaatcttgctaggtgttggtgcttttctccta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || | |||||| | |||||||| ||| |||||||||||||||| || |||| Sbjct: 1455 gtgtttaaggctttgtattttggtggtatatatgatacctgggctcccggcggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 ||||||||||||| || | || |||| || ||| |||||||||||||||||| ||| Sbjct: 1515 ataagaaaaattacgaaccttacgcttaacccaagtactatatttggttatttactcaaa 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 || |||||||| ||||| || |||||||||||||| || || |||||||| ||||||| Sbjct: 1575 tccccttttggaggagagggatggattgttagtgtggacaatctagaagatctaattgga 1634 Query: 573 ggacatgtatggttgggttttatttgt 599 |||||||| ||||| |||| ||||||| Sbjct: 1635 ggacatgtgtggttaggttctatttgt 1661
>gb|AF528943.1| Widdringtonia cedarbergensis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 369 bits (186), Expect = 7e-99 Identities = 462/559 (82%) Strand = Plus / Plus Query: 33 catgccggattaatcgtattctgggccggagcaatgaacctatttgaagtggcccatttc 92 |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1095 catgccggattaattgtattctgggctggagcaatgaatctatttgaagtggctcatttt 1154 Query: 93 gtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttagctactcta 152 ||||| ||||| || |||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 1155 gtaccggaaaaacctatgtatgaacaaggattaattttacttccccatctagctactcta 1214 Query: 153 ggttggggagtagggccannnnnnnaagttctagatacttttccatactttgtatctggc 212 || |||||||| || || || || | ||||||||||| || |||||||| || Sbjct: 1215 ggatggggagtcggtcctggtggggaaattgtggatacttttccctattttgtatccgga 1274 Query: 213 gtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacgcgcttctg 272 ||||||||| ||||||| || ||||| |||||||||||||| ||||||||||| || | Sbjct: 1275 gtacttcacttaatttcttctgcagttttaggcttcggtggtatttatcacgcactaatt 1334 Query: 273 ggacccgagactcttgaagaatcttttccattctttggttatgtctggaaagatagaaat 332 |||||||| ||| | |||||||||||||| || ||||||||||| ||||||||||| || Sbjct: 1335 ggacccgaaactttagaagaatcttttcctttttttggttatgtatggaaagataggaac 1394 Query: 333 aaaatgactacaattttgggtattcacttaattttgttaggtctaggtgcttttcttcta 392 |||||||| |||||||| ||||||||| |||| ||| ||||| | ||||||||||||||| Sbjct: 1395 aaaatgaccacaattttaggtattcacctaatcttgctaggtatcggtgcttttcttcta 1454 Query: 393 gtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnnnnnnagat 452 || | |||||| | |||||||| || |||||||||||||||| || |||| Sbjct: 1455 gtgtttaaggctttatattttggtggcatatatgatacctgggctcccggcggtggagat 1514 Query: 453 gtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatttactaaaa 512 |||||||||||||| || | || |||| | |||| |||||||||||||||||| ||| Sbjct: 1515 gtaagaaaaattacgaaccttacacttaactcaagtgctatatttggttatttactcaaa 1574 Query: 513 tctccttttgggggagaagggtggattgttagtgtagatgatttagaagatataattggt 572 || |||||||| || || || |||||||||||||| || || |||||||| ||||||| Sbjct: 1575 tccccttttggaggggagggatggattgttagtgtggacaatctagaagatttaattgga 1634 Query: 573 ggacatgtatggttgggtt 591 |||||||| ||||| |||| Sbjct: 1635 ggacatgtgtggttaggtt 1653
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 369 bits (186), Expect = 7e-99 Identities = 468/567 (82%) Strand = Plus / Minus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| ||||| |||||||| ||||||||||| ||||||||||| || |||||||| | Sbjct: 43343 acgtagctcatgctggattaattgtattctgggctggagcaatgaatctttttgaagtag 43284 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | || || |||||||| ||||| ||||| |||||||| || ||| ||||||| ||| ||| Sbjct: 43283 ctcactttgtaccagagaagcctatgtacgaacaaggattaattctacttcctcacctag 43224 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||||||||||||||| || ||||| |||||||||||||||| |||| Sbjct: 43223 ctactttaggttggggagtaggtcctggtggagaagttatagatacttttccatattttg 43164 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||||||||||||||| || || || ||||| || ||||| |||||||||| Sbjct: 43163 tatctggagtacttcacctaatttcttctgcggttttaggttttggtggtatttatcacg 43104 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | | | || || || ||| | ||||||||||| ||||| ||||||||||| ||||||| Sbjct: 43103 cattaattgggccagaaactttagaagaatctttcccattttttggttatgtatggaaag 43044 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||| ||||||||||||||| ||||| |||||||| |||||||| |||||| || |||| Sbjct: 43043 ataaaaataaaatgactactattttaggtattcatttaattttattaggtgctggcgctt 42984 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 | ||| ||||| | || || | ||||||||||| |||||||||| ||||| ||| Sbjct: 42983 tccttttagtatttaaagccttatattttggcggaatatatgatacttgggctcctggag 42924 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 || |||||||||||||| ||| | || |||||||| |||||||||||||||||| Sbjct: 42923 gaggtgacgtaagaaaaattacaaatcttactcttagtcctggtgttatatttggttatt 42864 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||| ||||| |||||||| || ||||| |||||||||||||||||| |||||||||||| Sbjct: 42863 tacttaaatcaccttttggtggcgaaggatggattgttagtgtagataatttagaagata 42804 Query: 565 taattggtggacatgtatggttgggtt 591 | ||||| || ||||| ||||| |||| Sbjct: 42803 ttattggaggccatgtttggttaggtt 42777
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 361 bits (182), Expect = 2e-96 Identities = 467/567 (82%) Strand = Plus / Minus Query: 25 acgtagcccatgccggattaatcgtattctgggccggagcaatgaacctatttgaagtgg 84 ||||||| |||| |||||||||||| || ||||| ||||| |||||| |||||||||||| Sbjct: 54741 acgtagctcatggcggattaatcgtgttttgggctggagcgatgaacttatttgaagtgg 54682 Query: 85 cccatttcgtaccagaaaagcccatgtatgaacaagggttgattttacttccacacttag 144 | ||||| || ||||||||||| ||||||||||| || |||||| ||||||| || ||| Sbjct: 54681 ctcattttgttccagaaaagcctatgtatgaacagggattgattctacttccccatctag 54622 Query: 145 ctactctaggttggggagtagggccannnnnnnaagttctagatacttttccatactttg 204 ||||| |||| ||||||||||| || ||||| |||||| |||||||||||| | Sbjct: 54621 ctactttaggatggggagtaggtcctggtggagaagttgtagatatttttccatacttcg 54562 Query: 205 tatctggcgtacttcacctaatttcctccgcagtcttaggcttcggtggcatttatcacg 264 ||||||| ||||| ||| |||| || |||||||| ||||| || || || || || |||| Sbjct: 54561 tatctggagtactccacttaatctcttccgcagttttaggttttggaggtatctaccacg 54502 Query: 265 cgcttctgggacccgagactcttgaagaatcttttccattctttggttatgtctggaaag 324 | || | |||||||| ||| | ||||| ||||||||||| |||||||||| ||||||| Sbjct: 54501 caattattggacccgaaactttggaagagtcttttccattttttggttatgcatggaaag 54442 Query: 325 atagaaataaaatgactacaattttgggtattcacttaattttgttaggtctaggtgctt 384 ||| || ||||||||||||||||| |||||||| ||||| ||||||||| ||||||| Sbjct: 54441 ataagaacaaaatgactacaattttaggtattcatttaatcttgttaggtgctggtgctt 54382 Query: 385 ttcttctagtactcaaggctctttattttggcggtgtatatgatacctgggcccctnnnn 444 ||||| ||| ||||| ||| | |||||||| |||||||| ||||| ||||| || Sbjct: 54381 ttctttcagtgctcaaagctttgtattttggaggtgtatacgatacgtgggctcccggtg 54322 Query: 445 nnnnagatgtaagaaaaattaccaatttgacccttagtcccagtgttatatttggttatt 504 |||||||||||||||||| ||| | || |||| ||| |||||| |||||||||||| Sbjct: 54321 gtggagatgtaagaaaaattacaaatcttactcttaatccaagtgttgtatttggttatt 54262 Query: 505 tactaaaatctccttttgggggagaagggtggattgttagtgtagatgatttagaagata 564 |||||||||| |||||||| ||||| || ||||| |||||||| || || ||||||||| Sbjct: 54261 tactaaaatcaccttttggtggagagggatggatagttagtgtggacaatctagaagata 54202 Query: 565 taattggtggacatgtatggttgggtt 591 ||||||| |||||||||||||| |||| Sbjct: 54201 taattgggggacatgtatggttaggtt 54175 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,998,221 Number of Sequences: 3902068 Number of extensions: 5998221 Number of successful extensions: 121541 Number of sequences better than 10.0: 523 Number of HSP's better than 10.0 without gapping: 531 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 119343 Number of HSP's gapped (non-prelim): 2135 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
