ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41l13 |
|---|---|
| Clone Library Name | barley_pub |
>CRYD_BRARE (Q4KML2) Cryptochrome DASH (Protein CRY-DASH) (zCRY-DASH)| Length = 520 Score = 112 bits (279), Expect = 9e-25 Identities = 72/175 (41%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Frame = +1 Query: 22 DDLPF-RLNDMPSSYGGFREAVKGL-EVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGL 195 DDLPF + +P Y FR+AV+ VR VL PE+VK P + LE G IPT LG Sbjct: 145 DDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLSTPEQVKSPP--SGLEEGPIPTFDSLGQ 202 Query: 196 SAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCK 375 + P D +SA GGE EAL RLK + + A T+N + G +FS K Sbjct: 203 TEP---LDDCRSAFPCR--GGETEALARLKHYFWDTNAV---ATYKETRNGMIGVDFSTK 254 Query: 376 ISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 SPWLA GC+SPR++YE++KK+ + + T++ T W++FELLWRD Sbjct: 255 FSPWLALGCISPRYIYEQIKKYEV------------ERTANQSTYWVIFELLWRD 297
>CRYD_ORYSA (Q651U1) Cryptochrome DASH, chloroplast/mitochondrial precursor| Length = 582 Score = 95.9 bits (237), Expect = 7e-20 Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 4/177 (2%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAVKGLE-VRKVLDAPEEVKCVPMKNVLEPGD---IPTLGEL 189 DDLPF +N++P Y FR+AV+ VR P + P + E G +PTL L Sbjct: 238 DDLPFSVNNLPDVYTQFRKAVESKSSVRNCSKLPPSLGPPPGSGLDEIGGWGTVPTLESL 297 Query: 190 GLSAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFS 369 GLS +K+ G + +GGE+ AL R+ ++ + + V T+N + G ++S Sbjct: 298 GLSM-------TKAEKGMHFVGGESAALGRVHEYFWK---KDQLKVYKETRNGMLGPDYS 347 Query: 370 CKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 K SPWLA+G LSPR++ EE+K++ + I + S T W++FEL+WRD Sbjct: 348 TKFSPWLASGSLSPRYICEEVKRYEKQRIANDS------------TYWVLFELIWRD 392
>CRYD_XENLA (Q75WS4) Cryptochrome DASH| Length = 523 Score = 94.0 bits (232), Expect = 2e-19 Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Frame = +1 Query: 22 DDLPFR-LNDMPSSYGGFREAVKGL-EVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGL 195 +DLPFR ++ +P Y FR+AV+ +VR P+++K P+ + LE G +P+ + Sbjct: 146 EDLPFRHISSLPDVYTQFRKAVETQGKVRPTFQMPDKLK--PLPSGLEEGSVPSHEDFDQ 203 Query: 196 SAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCK 375 P D ++A + GGE++AL+RL+ + E + + KD T+N + G ++S K Sbjct: 204 QDP---LTDPRTAFPCS--GGESQALQRLEHYFWETNLVAS--YKD-TRNGLIGLDYSTK 255 Query: 376 ISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 +PWLA GC+SPR++YE++ K+ + + T++ T W++FELLWRD Sbjct: 256 FAPWLALGCVSPRYIYEQIGKY------------EKERTANQSTYWVIFELLWRD 298
>CRYD_LYCES (Q38JU2) Cryptochrome DASH, chloroplast/mitochondrial precursor| (Cryptochrome-3) Length = 577 Score = 93.2 bits (230), Expect = 4e-19 Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 1/174 (0%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAVK-GLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLS 198 DDLPF +P Y FR++V+ +VR P P V + G +P + ELGL Sbjct: 233 DDLPFDCESLPDVYTQFRKSVEYKSKVRNCTKLPTSFG--PPPEVGDWGHVPQVSELGL- 289 Query: 199 APPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKI 378 Q K + G N +GGE+ AL R+ + + + V T+N + GA++S K Sbjct: 290 ------QQEKVSKGMNFVGGESAALGRVHDYFWK---KDLLKVYKETRNGMLGADYSTKF 340 Query: 379 SPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 SPWLA+G LSPRF+ EE+K++ + + S+ T W++FEL+WRD Sbjct: 341 SPWLASGSLSPRFIDEEVKRY------------EKERLSNDSTYWVLFELIWRD 382
>CRYD_ARATH (Q84KJ5) Cryptochrome DASH, chloroplast/mitochondrial precursor| Length = 569 Score = 92.8 bits (229), Expect = 6e-19 Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 1/174 (0%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAVKG-LEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLS 198 DDLPF + D+P Y FR++V+ +R P + P +V + GD+PTL +LG+ Sbjct: 225 DDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIP--LSLGPTPSVDDWGDVPTLEKLGV- 281 Query: 199 APPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKI 378 + + G +GGE+ + R+ ++ + + V T+N + G ++S K Sbjct: 282 ------EPQEVTRGMRFVGGESAGVGRVFEYFWK---KDLLKVYKETRNGMLGPDYSTKF 332 Query: 379 SPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 SPWLA GC+SPRF+YEE++++ + + S T W++FEL+WRD Sbjct: 333 SPWLAFGCISPRFIYEEVQRYEKERVANNS------------TYWVLFELIWRD 374
>CRYD_GLOVI (Q7NMD1) Cryptochrome DASH| Length = 500 Score = 92.4 bits (228), Expect = 7e-19 Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAV-KGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLS 198 DDLPF + +P + FR+ V + + L AP ++ +P ++PG+IP L +LGL Sbjct: 142 DDLPFAIEAIPELFTDFRKQVERSAAINPPLPAPAKLPPLP---AVDPGEIPQLADLGLE 198 Query: 199 APPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKI 378 +P + A GGE L RL+++ + + K+ K T+N + GA++S K Sbjct: 199 SPV-----TDERAVLQFKGGETSGLARLEEYFWQKSLL--KSYKQ-TRNGMLGADYSSKF 250 Query: 379 SPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 S WLA GCLS R+++E+++ + + I + S T WL+FELLWRD Sbjct: 251 SAWLALGCLSARYIHEQVQTYETKRIKNDS------------TYWLIFELLWRD 292
>CRYD_SYNY3 (P77967) Cryptochrome DASH| Length = 489 Score = 89.7 bits (221), Expect = 5e-18 Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 9/182 (4%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAV--KGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGL 195 +DLPF + D+P + FR+ + K + +R AP ++ +P N+ +L L Sbjct: 144 EDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQL--LPSPNI----------KLEL 191 Query: 196 SAPPA-----MAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKD--STQNSIY 354 +APP + D +S GGE L RL+ + +KD T+N + Sbjct: 192 TAPPPEFFPQINFDHRSVLAFQ--GGETAGLARLQDY-----FWHGDRLKDYKETRNGMV 244 Query: 355 GANFSCKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLW 534 GA++S K SPWLA GCLSPRF+Y+E+K++ + + S+ T+WL+FELLW Sbjct: 245 GADYSSKFSPWLALGCLSPRFIYQEVKRY------------EQERVSNDSTHWLIFELLW 292 Query: 535 RD 540 RD Sbjct: 293 RD 294
>CRYD_RHOBA (Q7UJB1) Cryptochrome DASH| Length = 488 Score = 88.2 bits (217), Expect = 1e-17 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 1/174 (0%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFREAV-KGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLS 198 D+LPF + D P + FR+ + K E R L+ P + + V GDIPTL LGLS Sbjct: 139 DELPFEIADTPELFTDFRKEIEKQCEARSPLEEPIRIHGTLPEEV-NAGDIPTLESLGLS 197 Query: 199 APPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKI 378 PP D + + GG+ A +R++++ + V T+N + N S K Sbjct: 198 TPPL---DDRCL--NQFTGGQNAAQQRMEEYIWN---EDRLRVYKETRNGMLHPNDSSKF 249 Query: 379 SPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 SPWLA GCLSPR + + ++++ + + + T W++FELLWRD Sbjct: 250 SPWLAQGCLSPRMIADHVRRY------------EEERVKNKSTYWMIFELLWRD 291
>CRYD_NATPD (Q3IPX9) Cryptochrome DASH| Length = 474 Score = 87.8 bits (216), Expect = 2e-17 Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 1/174 (0%) Frame = +1 Query: 22 DDLPFRLNDMPSSYGGFR-EAVKGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLS 198 DDLP D+ ++ +R E VR APE V P + L PG +PT+ LG+S Sbjct: 140 DDLPTPPTDIDDTFTPWRKETEAAATVRDPRSAPETV---PTPDGLTPGPVPTVESLGVS 196 Query: 199 APPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKI 378 PP + A GGE+ R++ + E + +T+N + GA++S K Sbjct: 197 EPP-----TDDRAVLEFEGGESAGKRRVESYIWE---GDHLREYKTTRNGLLGADYSSKF 248 Query: 379 SPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 SPWLA GCLSPR+++ E++++ + + ++ T WL+FEL WRD Sbjct: 249 SPWLAAGCLSPRWLHREVERY------------EDERVANEDTYWLVFELAWRD 290
>CRYD_OSTTA (Q5IFN2) Cryptochrome DASH, chloroplast/mitochondrial precursor| Length = 546 Score = 77.4 bits (189), Expect = 2e-14 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 13/186 (6%) Frame = +1 Query: 22 DDLPFR----LNDMPSSYGGFREAVKG-LEVRKVLDAP--EEVKCVP-----MKNVLEPG 165 DD+PF L+D+P + FR V+ +VR V+ AP E+ VP + + +P Sbjct: 155 DDVPFDVTSGLSDLPDVFTPFRNKVESKCKVRDVIPAPTANELGHVPASVEGFEWMPKPS 214 Query: 166 DIP-TLGELGLSAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQ 342 D+P E+ + + + + GGE+ AL R+K + E A T+ Sbjct: 215 DLPFASSEIAMDCDKRIKDCLDERSVLDFKGGESNALARVKYYLWE---SDRLATYFETR 271 Query: 343 NSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMF 522 N + G ++S K++PWLA GC+SPR + E++++ + + + T W++F Sbjct: 272 NGMLGGDYSTKLAPWLALGCVSPRHVVSEIRRY------------ESERVENKSTYWVIF 319 Query: 523 ELLWRD 540 EL+WRD Sbjct: 320 ELIWRD 325
>CRYD_VIBPA (Q87JP5) Cryptochrome DASH| Length = 445 Score = 76.3 bits (186), Expect = 5e-14 Identities = 52/171 (30%), Positives = 82/171 (47%) Frame = +1 Query: 28 LPFRLNDMPSSYGGFREAVKGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLSAPP 207 LPF L D+P ++ FR+ V+G+++ +DAP + +P + +PTL Sbjct: 143 LPFTLPDLPETFTQFRKCVEGIDIAHPIDAPSRLPPMP-----KGAQLPTLSSFYFD--- 194 Query: 208 AMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPW 387 +SA S GGE L +++ K T+N + G +S K SPW Sbjct: 195 ------ESALFS---GGEWSGLAHCRRYFFSGLASSYK----ETRNGLDGMAYSTKFSPW 241 Query: 388 LATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 LA GC+SPR ++ LK++ + G +D+ T W+ FELLWR+ Sbjct: 242 LALGCVSPRMIHAMLKQY-----------EQTQGANDS-TYWIYFELLWRE 280
>CRYD_IDILO (Q5QXE0) Cryptochrome DASH| Length = 449 Score = 59.7 bits (143), Expect = 5e-09 Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 1/173 (0%) Frame = +1 Query: 25 DLPFRLNDMPSSYGGFREAVKGLEVRKVLDAPEEVKCVPMKNVLEPG-DIPTLGELGLSA 201 +LPF L D+P ++ FR+ V+ L + + +P KN+ PG TL EL Sbjct: 152 ELPFELADLPETFSQFRKKVEPLSRNFSVQPVNALPSLP-KNISYPGFKAETLNEL---- 206 Query: 202 PPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKIS 381 A + GGE AL L + + + T+N++ + S K S Sbjct: 207 -----------ASDDFEGGERAALTHLTSYFSG----ESAGTYKQTRNALDDFSSSTKFS 251 Query: 382 PWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 PWLA GCLS +R I + + + + + W+ FELLWR+ Sbjct: 252 PWLAQGCLS------------VRQIMAALRAYETEFGENESSYWISFELLWRE 292
>CRYD_VIBCH (Q9KR33) Cryptochrome DASH| Length = 461 Score = 58.9 bits (141), Expect = 9e-09 Identities = 46/171 (26%), Positives = 77/171 (45%) Frame = +1 Query: 28 LPFRLNDMPSSYGGFREAVKGLEVRKVLDAPEEVKCVPMKNVLEPGDIPTLGELGLSAPP 207 LPF L +PS++ FR+ V+ + + + P + + L DI T Sbjct: 143 LPFALEALPSTFTQFRKQVETISLSAPMGYPHVLPPIEQGWQLPLMDIVT---------- 192 Query: 208 AMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPW 387 + + SA +GGE L + + + K T+N + G ++S K SPW Sbjct: 193 ---EPNHSA----FVGGEQAGLTHCQNYFSSLLPSRYK----ETRNGLDGMDYSTKFSPW 241 Query: 388 LATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 LA G +SP+ +Y L+++ + G +D+ T W+ FELLWR+ Sbjct: 242 LALGAVSPKTIYAMLQRY-----------EAVHGANDS-TYWIFFELLWRE 280
>CRYD_NEUCR (Q7SI68) Putative crytochrome DASH, mitochondrial precursor| Length = 745 Score = 57.8 bits (138), Expect = 2e-08 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 24/191 (12%) Frame = +1 Query: 40 LNDMPSSYGGFREAVKGL--EVRKVLDAPE--------EVKCVPMKNVLEPGDIPTLGEL 189 LND+P + +R+ ++ L + RK L PE ++ +P + P +IP E Sbjct: 178 LNDLPDVFTTYRKQIEPLREKARKTLPVPEKGALPAYPDIDMIPSQQ--PPFNIPGTCEE 235 Query: 190 GLSAPPAMAQD---------SKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQ 342 + A ++ K+ + GGE A +R+ M K+ KDS + Sbjct: 236 LVDAVVRPVKNFLKDLPDFPEKAESSHPFRGGETSAHKRIDHLVLSGGM---KSYKDS-R 291 Query: 343 NSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPK----DGDGTSD-AGT 507 N + G +FS K+S +LA GC++ R ++ HA+ A G+ K DG G D GT Sbjct: 292 NGLLGPDFSTKLSAYLAQGCVTARQIH-----HALVAYEDGTGTKYKGADGFGEGDNQGT 346 Query: 508 NWLMFELLWRD 540 + ELLWRD Sbjct: 347 ETVRMELLWRD 357
>CRYD_GIBZE (Q4I1Q6) Putative crytochrome DASH| Length = 678 Score = 50.4 bits (119), Expect = 3e-06 Identities = 40/130 (30%), Positives = 58/130 (44%) Frame = +1 Query: 151 VLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVK 330 +LEP P + + PP + +KSA GGE A +RL M Sbjct: 217 LLEPVKAPIISD-----PPQFPEGAKSAHPFK--GGETPAWDRLYHLIKSGAM----TTY 265 Query: 331 DSTQNSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTN 510 T+N + G +S K+S +LA G ++ R ++ EL K + S S + GT Sbjct: 266 QETRNGLLGTEYSTKLSAFLAMGTITARSIHAELVKFEDGSEESYSRGFGFGKGENEGTR 325 Query: 511 WLMFELLWRD 540 + FELLWRD Sbjct: 326 AVRFELLWRD 335
>TIF1B_HUMAN (Q13263) Transcription intermediary factor 1-beta (TIF1-beta)| (Tripartite motif protein 28) (Nuclear corepressor KAP-1) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (RING finger protein 96) Length = 835 Score = 34.7 bits (78), Expect = 0.18 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = +1 Query: 160 PGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAEALERLK 285 PG+ GE +AP A A S SAA S+ GG AEALE L+ Sbjct: 22 PGEGSAGGEKRSTAPSAAASASASAAASSPAGGGAEALELLE 63
>PHR_NEUCR (P27526) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 642 Score = 32.7 bits (73), Expect = 0.68 Identities = 31/110 (28%), Positives = 47/110 (42%) Frame = +1 Query: 211 MAQDSKSAAGSNLIGGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWL 390 + D K+ S GE EAL+RL+KF E K + + +I + +S Sbjct: 345 LRDDEKARYHSLWPAGEHEALKRLEKFCDEA------IGKYAERRNIPAMQGTSNLSVHF 398 Query: 391 ATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDGTSDAGTNWLMFELLWRD 540 A+G LS R AIR + K +G ++ W+ E+ WRD Sbjct: 399 ASGTLSAR--------TAIRTARDRNNTKKLNGGNEGIQRWIS-EVAWRD 439
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 32.0 bits (71), Expect = 1.2 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 16/96 (16%) Frame = +1 Query: 61 YGGFREAVKGLEVRKVLD--APEEVKCVPMKNVL---EPGDIPTL-----------GELG 192 + GFRE K +++K+++ + E++ VP+ + GD+PT G++G Sbjct: 426 FPGFREPEKAEKLKKLMEKASSSELEKVPISGEILREVRGDVPTTRMFNCYSNYEGGQVG 485 Query: 193 LSAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAE 300 L+ K + +G E EALERLK A + Sbjct: 486 LTKSSL----EKVISTLEAVGVEGEALERLKALARD 517
>TPBG_MACFA (Q4R8Y9) Trophoblast glycoprotein precursor| Length = 420 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -1 Query: 404 RQPVASHGEILQEKLAPYMLFWVLSLTALFGCIQHSAANFFSLSRASASPPI 249 R P A G + +LA +L WV S ++ S++ F S ASA PP+ Sbjct: 7 RGPAAGDGRLRLARLALVLLGWVSSSSSTSSASSSSSSAPFLASAASAQPPL 58
>EXTL2_MOUSE (Q9ES89) Exostosin-like 2 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Alpha-1,4-N-acetylhexosaminyltransferase EXTL2) (Alpha-GalNAcT EXTL2) (EXT-related protein 2) Length = 330 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 488 PSPSLGVDPDXIALMACFFNSSYMKRGERQPVASHGEI 375 P P G + + A FFNS Y++ ++QP A H I Sbjct: 201 PGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALI 238
>SRBS1_HUMAN (Q9BX66) Sorbin and SH3 domain-containing protein 1 (Ponsin)| (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12) Length = 1292 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +1 Query: 145 KNVLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAEALERLKKF 291 K+VLE GDIP G GL P + A S + + I A+ LE ++F Sbjct: 683 KSVLEGGDIPLQGLSGLKRPSSSASTKDSESPRHFI--PADYLESTEEF 729
>PHR_ECOLI (P00914) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 472 Score = 30.0 bits (66), Expect = 4.4 Identities = 35/137 (25%), Positives = 54/137 (39%) Frame = +1 Query: 130 KCVPMKNVLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAEALERLKKFAAECCM 309 +CV V G I + L+ P +S ++ E A+ +L++F Sbjct: 168 ECVAAPKVRSSGSIEPSPSITLNYP------RQSFDTAHFPVEEKAAIAQLRQFCQ---- 217 Query: 310 QPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAIXSGSTPKDGDG 489 N A + Q + ++S LATG LSPR L +A+ G Sbjct: 218 --NGAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGG-------- 267 Query: 490 TSDAGTNWLMFELLWRD 540 AG+ WL EL+WR+ Sbjct: 268 ---AGSVWLN-ELIWRE 280
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 25.0 bits (53), Expect(2) = 7.5 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 285 EICCRMLYAAEQSCQR*YPE*HIWC*FLLQN 377 ++CC+ L +E + QR I C LLQN Sbjct: 254 DVCCKFLQLSENNTQRGVETCGILCGKLLQN 284 Score = 22.7 bits (47), Expect(2) = 7.5 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = +1 Query: 157 EPGDIPTLGELGLSAP--PAMAQDSK-SAAGSNLIGGEAEALERLKKFAAECC 306 EP P L G P PA+ + K S+ GSN G ++ L +K CC Sbjct: 205 EPPVTPLLPSYGTVQPHPPAVDRSLKPSSYGSNSSGVTSDGLRHVKIPRDVCC 257
>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)| (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12) Length = 1290 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 145 KNVLEPGDIPTLGELGLSAPPAMAQDSKSAAGSN 246 K+VLE GDIP G GL P + A G N Sbjct: 450 KSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGN 483
>DHE42_HALSA (Q9HSM4) NADP-specific glutamate dehydrogenase B (EC 1.4.1.4)| (NADP-GDH B) Length = 429 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -1 Query: 503 PASDVPSPSLGVDPDXIALMACFFNSSYMKRGERQP 396 P+ D+P+P +G D MA F ++ M++GE P Sbjct: 151 PSQDIPAPDMGTDAQT---MAWFMDAYSMQQGETVP 183
>TPBG_HUMAN (Q13641) Trophoblast glycoprotein precursor (5T4 oncofetal| trophoblast glycoprotein) (5T4 oncotrophoblast glycoprotein) (5T4 oncofetal antigen) (M6P1) Length = 420 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -1 Query: 404 RQPVASHGEILQEKLAPYMLFWVLSLTALFGCIQHSAANFFSLSRASASPPI 249 R P A G + +LA +L WV S + S++ F S SA PP+ Sbjct: 7 RGPAAGDGRLRLARLALVLLGWVSSSSPTSSASSFSSSAPFLASAVSAQPPL 58
>Y1272_METMA (Q8PXE8) UPF0245 protein MM1272| Length = 380 Score = 29.3 bits (64), Expect = 7.6 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 151 VLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAE 267 ++ PGD+ + ELG A A+D+KS A ++G E Sbjct: 34 LVNPGDVEKVRELGNITVAAFARDNKSGADIVVVGKRGE 72
>CNIH2_RAT (Q5BJU5) Cornichon homolog 2| Length = 160 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 253 GGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMY 423 G A A ERLK CC+ V + + + ++ F C + W+ G P Y Sbjct: 45 GNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLC-AAEWVTLGLNIPLLFY 100
>CNIH2_MOUSE (O35089) Cornichon homolog 2 (Cornichon-like protein)| Length = 160 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 253 GGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMY 423 G A A ERLK CC+ V + + + ++ F C + W+ G P Y Sbjct: 45 GNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLC-AAEWVTLGLNIPLLFY 100
>CNIH2_HUMAN (Q6PI25) Cornichon homolog 2 (Cornichon-like protein)| Length = 160 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 253 GGEAEALERLKKFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMY 423 G A A ERLK CC+ V + + + ++ F C + W+ G P Y Sbjct: 45 GNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLC-AAEWVTLGLNIPLLFY 100
>Y4592_METAC (Q8THC5) UPF0245 protein MA4592| Length = 380 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 151 VLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIGGEAE 267 ++ PGD+ + ELG A A+D+KS A ++G E Sbjct: 34 LVNPGDVEKVRELGNITVAAFARDNKSRADIVVVGKRGE 72
>LSHR_RAT (P16235) Lutropin-choriogonadotropic hormone receptor precursor| (LH/CG-R) (LSH-R) (Luteinizing hormone receptor) Length = 700 Score = 28.9 bits (63), Expect = 9.9 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Frame = +1 Query: 118 PEEVKCVPMKNVLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIG----GEAEALERLK 285 PE C P + PG L L L+ P S++ G N + ++++LER++ Sbjct: 35 PEPCDCAPDGALRCPGPRAGLARLSLTYLPVKVIPSQAFRGLNEVVKIEISQSDSLERIE 94 Query: 286 KFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAI 456 A + + ++ + +T+N +Y I P T PR Y + IR + Sbjct: 95 ANAFDNLLNLSELLIQNTKNLLY-------IEPGAFTNL--PRLKYLSICNTGIRTL 142
>LSHR_MOUSE (P30730) Lutropin-choriogonadotropic hormone receptor precursor| (LH/CG-R) (LSH-R) (Luteinizing hormone receptor) Length = 700 Score = 28.9 bits (63), Expect = 9.9 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Frame = +1 Query: 118 PEEVKCVPMKNVLEPGDIPTLGELGLSAPPAMAQDSKSAAGSNLIG----GEAEALERLK 285 PE C P + PG L L L+ P S++ G N + ++++LER++ Sbjct: 35 PEPCDCAPDGALRCPGPRAGLARLSLTYLPVKVIPSQAFRGLNEVVKIEISQSDSLERIE 94 Query: 286 KFAAECCMQPNKAVKDSTQNSIYGANFSCKISPWLATGCLSPRFMYEELKKHAIRAI 456 A + + ++ + +T+N +Y I P T PR Y + IR + Sbjct: 95 ANAFDNLLNLSEILIQNTKNLLY-------IEPGAFTNL--PRLKYLSICNTGIRTL 142
>EXTL2_HUMAN (Q9UBQ6) Exostosin-like 2 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Alpha-1,4-N-acetylhexosaminyltransferase EXTL2) (Alpha-GalNAcT EXTL2) (EXT-related protein 2) Length = 330 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 488 PSPSLGVDPDXIALMACFFNSSYMKRGERQPVASHGEI 375 P G + + A FFNS Y++ +RQP A H I Sbjct: 200 PGSGNGDQYSMVLIGASFFNSKYLELFQRQPAAVHALI 237
>DHE41_HALSA (P29051) NAD-specific glutamate dehydrogenase A (EC 1.4.1.2)| (NAD-GDH A) Length = 435 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 503 PASDVPSPSLGVDPDXIALMACFFNSSYMKRGERQP 396 P D+P+P +G DP MA ++ M+ GE P Sbjct: 158 PNQDIPAPDMGTDPQT---MAWLMDAYSMQEGETTP 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,189,416 Number of Sequences: 219361 Number of extensions: 1526107 Number of successful extensions: 4719 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4598 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4691 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
