ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal41l08 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 223 bits (567), Expect(2) = e-113 Identities = 109/110 (99%), Positives = 109/110 (99%) Frame = +3 Query: 18 VTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQ 197 VTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQ Sbjct: 28 VTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQ 87 Query: 198 APTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 APTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK Sbjct: 88 APTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 137 Score = 206 bits (523), Expect(2) = e-113 Identities = 99/100 (99%), Positives = 100/100 (100%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 137 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 196 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 197 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 236
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 197 bits (502), Expect(2) = e-101 Identities = 96/100 (96%), Positives = 99/100 (99%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLI Sbjct: 138 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLI 196 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 197 RQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 236 Score = 190 bits (483), Expect(2) = e-101 Identities = 95/112 (84%), Positives = 101/112 (90%), Gaps = 2/112 (1%) Frame = +3 Query: 18 VTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSL 191 VTSAVNYHGKSS NRF VMA E +DE + TD +WKGLAYDISDDQQDITRGKG VDSL Sbjct: 28 VTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSL 86 Query: 192 FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 FQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVVH+SK Sbjct: 87 FQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISK 138
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 197 bits (500), Expect(2) = 6e-94 Identities = 94/100 (94%), Positives = 98/100 (98%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLI Sbjct: 143 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLI 202 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREA+D+IKKGKM CLFINDLDAGAGRMGGTTQYTVN Sbjct: 203 RQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVN 242 Score = 167 bits (423), Expect(2) = 6e-94 Identities = 82/113 (72%), Positives = 95/113 (84%), Gaps = 3/113 (2%) Frame = +3 Query: 18 VTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDS 188 V++AV YHGKSS +N RF MAA+ +DE + TD +WKGLAYDISDDQQDITRGKG+VD+ Sbjct: 31 VSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDN 90 Query: 189 LFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA FMDKLVVHLSK Sbjct: 91 LFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSK 143
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 196 bits (497), Expect(2) = 6e-92 Identities = 95/100 (95%), Positives = 98/100 (98%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLI Sbjct: 135 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLI 193 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 194 RQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVN 233 Score = 162 bits (409), Expect(2) = 6e-92 Identities = 81/108 (75%), Positives = 92/108 (85%), Gaps = 4/108 (3%) Frame = +3 Query: 36 YHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAP 203 YHG + +R VMAA+ +D+ + TD +WKGLAYDISDDQQDITRGKGIVDSLFQAP Sbjct: 28 YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAP 87 Query: 204 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFMDKL+VHL+K Sbjct: 88 MGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAK 135
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 201 bits (512), Expect(2) = 3e-88 Identities = 96/100 (96%), Positives = 100/100 (100%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 206 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 207 RQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 246 Score = 144 bits (362), Expect(2) = 3e-88 Identities = 70/102 (68%), Positives = 86/102 (84%), Gaps = 1/102 (0%) Frame = +3 Query: 45 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 221 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 222 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++K Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITK 147
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 201 bits (512), Expect(2) = 3e-88 Identities = 96/100 (96%), Positives = 100/100 (100%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 206 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 207 RQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 246 Score = 144 bits (362), Expect(2) = 3e-88 Identities = 70/102 (68%), Positives = 86/102 (84%), Gaps = 1/102 (0%) Frame = +3 Query: 45 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 221 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 222 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++K Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITK 147
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 201 bits (510), Expect(2) = 5e-88 Identities = 95/100 (95%), Positives = 99/100 (99%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLI 206 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 207 RQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 246 Score = 144 bits (362), Expect(2) = 5e-88 Identities = 69/110 (62%), Positives = 85/110 (77%) Frame = +3 Query: 18 VTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQ 197 V + + + K+N + A D++ + D+W+GLAYD SDDQQDITRGKG+VDS+FQ Sbjct: 38 VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQ 97 Query: 198 APTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 AP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++K Sbjct: 98 APMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITK 147
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 201 bits (512), Expect(2) = 7e-86 Identities = 94/101 (93%), Positives = 101/101 (100%) Frame = +2 Query: 341 LQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 520 ++NF+TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL Sbjct: 143 VKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 202 Query: 521 IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 IRQRYREAAD+IKKGKMCCLFINDLDAGAGR+GGTTQYTVN Sbjct: 203 IRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVN 243 Score = 135 bits (341), Expect(2) = 7e-86 Identities = 61/94 (64%), Positives = 75/94 (79%) Frame = +3 Query: 66 FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 245 F ++A ++ +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE Sbjct: 51 FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110 Query: 246 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 Y+S GLR Y +DN + GFYIAPAFMDKL VH+ K Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVK 144
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 192 bits (487), Expect(2) = 3e-85 Identities = 91/100 (91%), Positives = 98/100 (98%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLI Sbjct: 147 KNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLI 206 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+I+KGKMC LFINDLDAGAGR+GGTTQYTVN Sbjct: 207 RQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVN 246 Score = 143 bits (361), Expect(2) = 3e-85 Identities = 69/108 (63%), Positives = 85/108 (78%), Gaps = 2/108 (1%) Frame = +3 Query: 30 VNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDISDDQQDITRGKGIVDSLFQAP 203 VN +SK + ++ ++DE + TDK WKGLA+D SDDQQDITRGKG VDSLFQAP Sbjct: 40 VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAP 99 Query: 204 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMDKLVVH++K Sbjct: 100 QGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITK 147
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 194 bits (492), Expect(2) = 5e-85 Identities = 91/100 (91%), Positives = 97/100 (97%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+ LPNIK+PLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI Sbjct: 151 KNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 210 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 211 RQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVN 250 Score = 140 bits (354), Expect(2) = 5e-85 Identities = 68/100 (68%), Positives = 81/100 (81%), Gaps = 4/100 (4%) Frame = +3 Query: 60 NRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 227 N+ + AE ID ++ ++D+WKGL D SDDQQDITRGKG+VDSLFQAPTG GTH A Sbjct: 52 NKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHA 111 Query: 228 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 VL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++K Sbjct: 112 VLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITK 151
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 192 bits (487), Expect(2) = 3e-84 Identities = 89/100 (89%), Positives = 97/100 (97%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI Sbjct: 151 KNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 210 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAA++I+KG +CCLFINDLDAGAGRMGGTTQYTVN Sbjct: 211 RQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVN 250 Score = 140 bits (352), Expect(2) = 3e-84 Identities = 70/100 (70%), Positives = 81/100 (81%), Gaps = 4/100 (4%) Frame = +3 Query: 60 NRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 227 NR +AAE + D K+ T D+WKGL D SDDQQDI RGKG+VDSLFQAPTG GTH A Sbjct: 52 NRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHA 111 Query: 228 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 VL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++K Sbjct: 112 VLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITK 151
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 197 bits (502), Expect(2) = 5e-84 Identities = 93/100 (93%), Positives = 99/100 (99%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 151 KNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 210 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREA+D+IKKGKMC LFINDLDAGAGR+GGTTQYTVN Sbjct: 211 RQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVN 250 Score = 133 bits (335), Expect(2) = 5e-84 Identities = 64/97 (65%), Positives = 82/97 (84%), Gaps = 3/97 (3%) Frame = +3 Query: 66 FTVMAAEN-IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 236 F ++AA+ I+E + T D+W+GLAYD+SDDQQDITRGKG+VDSLFQAP GTH AV+S Sbjct: 55 FKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVIS 114 Query: 237 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 S++Y+S GLR+Y+FDN GFYIAPAF+DKLVVH++K Sbjct: 115 SHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAK 151
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 196 bits (497), Expect(2) = 6e-83 Identities = 91/100 (91%), Positives = 98/100 (98%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+TLPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI Sbjct: 146 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 205 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQYTVN Sbjct: 206 RQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVN 245 Score = 132 bits (331), Expect(2) = 6e-83 Identities = 62/97 (63%), Positives = 77/97 (79%) Frame = +3 Query: 57 ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 236 +NR + A+ +DE + D+WKGL + SDDQQDI RGKG+VDSLFQAPTG GTH A+++ Sbjct: 51 SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109 Query: 237 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 SYEYVSQ L+ Y DN + GFYIAPAFMDKLVVH++K Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITK 146
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 191 bits (484), Expect(2) = 1e-82 Identities = 90/100 (90%), Positives = 96/100 (96%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLI Sbjct: 145 KNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLI 204 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+I KGKMC LFINDL+ GAGRMGGTTQYTVN Sbjct: 205 RQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVN 244 Score = 135 bits (341), Expect(2) = 1e-82 Identities = 68/100 (68%), Positives = 77/100 (77%) Frame = +3 Query: 48 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 227 SS+ TV AAEN E++NTDKW LA D SDDQ DI RGKG+VDSLFQAP GTH Sbjct: 48 SSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVP 105 Query: 228 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++K Sbjct: 106 IQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITK 145
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 197 bits (501), Expect(2) = 5e-82 Identities = 94/100 (94%), Positives = 98/100 (98%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 149 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 208 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 RQRYREAAD+I KGKMC LFINDLDAGAGR+GGTTQYTVN Sbjct: 209 RQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVN 248 Score = 127 bits (319), Expect(2) = 5e-82 Identities = 66/97 (68%), Positives = 78/97 (80%), Gaps = 3/97 (3%) Frame = +3 Query: 66 FTVMAAEN-IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 236 F ++AAE I+E + T D+WKGLAYDISDDQQDITRGKG+VD LFQAP GTH AV+S Sbjct: 55 FKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMS 114 Query: 237 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 347 SYEY+S GLR+ DN GFYIAPAF+DKLVVH++K Sbjct: 115 SYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITK 149
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 174 bits (441), Expect(2) = 3e-62 Identities = 82/100 (82%), Positives = 91/100 (91%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NFM LP IK+PLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLI Sbjct: 120 KNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLI 179 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 643 R RYREA+D+IKKG+MC LFINDLDAGAGRMG TTQYTVN Sbjct: 180 RTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVN 219 Score = 84.7 bits (208), Expect(2) = 3e-62 Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 3/86 (3%) Frame = +3 Query: 99 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 269 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 270 YDFDNTMGGFYIAPAFMDKLVVHLSK 347 F+N GFYI+PAF+DK+ +H++K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAK 120
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 135 bits (341), Expect(2) = 1e-34 Identities = 65/101 (64%), Positives = 81/101 (80%), Gaps = 1/101 (0%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LI Sbjct: 19 KNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLI 78 Query: 524 RQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVN 643 R RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Sbjct: 79 RLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVN 119 Score = 30.4 bits (67), Expect(2) = 1e-34 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 Query: 297 FYIAPAFMDKLVVHLSK 347 +YIAP F+DKL VH++K Sbjct: 3 YYIAPRFLDKLAVHITK 19
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 135 bits (340), Expect(2) = 2e-34 Identities = 65/101 (64%), Positives = 81/101 (80%), Gaps = 1/101 (0%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 +NF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LI Sbjct: 19 KNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLI 78 Query: 524 RQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVN 643 R RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Sbjct: 79 RLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVN 119 Score = 30.4 bits (67), Expect(2) = 2e-34 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 Query: 297 FYIAPAFMDKLVVHLSK 347 +YIAP F+DKL VH++K Sbjct: 3 YYIAPRFLDKLAVHITK 19
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/86 (31%), Positives = 44/86 (51%) Frame = +2 Query: 365 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 544 NIK P + ++G G GK+ + V + N I + EL S GE K +R+ +R+A Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544 Query: 545 ADMIKKGKMCCLFINDLDAGAGRMGG 622 + C +F +++D+ A R GG Sbjct: 545 RQVAP----CVIFFDEIDSLAPRRGG 566
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/82 (29%), Positives = 45/82 (54%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ + A Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221 Query: 548 DMIKKGKMCCLFINDLDAGAGR 613 K+ + C +F++++DA GR Sbjct: 222 ---KEHEPCVIFMDEIDAIGGR 240
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 38.1 bits (87), Expect = 0.022 Identities = 21/77 (27%), Positives = 40/77 (51%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+ Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112 Query: 548 DMIKKGKMCCLFINDLD 598 K +FI+++D Sbjct: 113 SHAVSDKPSVIFIDEID 129
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 37.0 bits (84), Expect = 0.050 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 572 CCLFINDLDAGAGR 613 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.050 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 572 CCLFINDLDAGAGR 613 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.050 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 572 CCLFINDLDAGAGR 613 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 37.0 bits (84), Expect = 0.050 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GKS+ + V + G +S+ +L S GE +L+RQ + +M ++ K Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222 Query: 572 CCLFINDLDAGAG 610 +FI+++D+ G Sbjct: 223 SIIFIDEIDSLCG 235
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 36.6 bits (83), Expect = 0.065 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GKS+ + V + +S+ +L S GE KL++Q + M ++ K Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226 Query: 572 CCLFINDLDAGAGRMG 619 +FI+++DA G G Sbjct: 227 SIIFIDEVDALTGTRG 242
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 35.8 bits (81), Expect = 0.11 Identities = 25/90 (27%), Positives = 42/90 (46%) Frame = +2 Query: 356 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 535 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 199 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 258 Query: 536 REAADMIKKGKMCCLFINDLDAGAGRMGGT 625 ++A K+ C +FI+++DA GR GT Sbjct: 259 KKA----KENSPCIVFIDEIDA-VGRQRGT 283
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+L+ Q R+ IKK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200 Query: 614 MGGTTQYT 637 M G + T Sbjct: 201 MFGNPETT 208
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/85 (28%), Positives = 39/85 (45%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + ++G G GK+ V + G+ +S + G A R R+ D Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249 Query: 551 MIKKGKMCCLFINDLDAGAGRMGGT 625 K+ C +F++++DA GR GT Sbjct: 250 QAKQNSPCIIFVDEIDA-VGRQRGT 273
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 35.4 bits (80), Expect = 0.15 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = +2 Query: 338 SLQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 517 S + F TL I P + ++G G GK+ V + I + EL GE A+ Sbjct: 231 SPERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGAR 289 Query: 518 LIRQRYREAADMIKKGKMCCLFINDLDAGAG 610 ++R+ + +M + K C +F +++DA G Sbjct: 290 MVRELF----EMARTKKACIIFFDEIDAVGG 316
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +2 Query: 356 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 535 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257 Query: 536 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 ++A K+ C +FI+++DA GAG GG + Sbjct: 258 KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE 290
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.15 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 K+ C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.15 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 K+ C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 35.4 bits (80), Expect = 0.15 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +2 Query: 383 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 553 I+ I GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69 Query: 554 IKKGKMCCLFINDLDAGAGRMGG 622 + G + L + A G G Sbjct: 70 VPSGIVLELLKEAMVASLGDTRG 92
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 35.4 bits (80), Expect = 0.15 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +2 Query: 383 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 553 I+ + GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65 Query: 554 IKKGKMCCLFINDLDAGAGRMGG 622 + G + L + A G G Sbjct: 66 VPSGVVLELLKEAMVASLGNTKG 88
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 35.0 bits (79), Expect = 0.19 Identities = 25/90 (27%), Positives = 41/90 (45%) Frame = +2 Query: 356 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 535 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 199 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 258 Query: 536 REAADMIKKGKMCCLFINDLDAGAGRMGGT 625 ++A D C +FI+++DA GR GT Sbjct: 259 KKAKD----NAPCIVFIDEIDA-VGRQRGT 283
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 35.0 bits (79), Expect = 0.19 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +2 Query: 356 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 535 T ++ P + ++G G GK+ + V + N I + +L S GE K IRQ + Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548 Query: 536 REAADMIKKGKMCCLFINDLDA---GAGRMGG 622 R+A + +F ++LD+ G G+ GG Sbjct: 549 RKARQVAP----TVIFFDELDSLAPGRGQTGG 576
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V A+ G+N I + E+ + G + +R+ + A + K Sbjct: 838 LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893 Query: 572 CCLFINDLDAGAGRMG----GTTQYTVN 643 C LF ++ D+ A + G G T VN Sbjct: 894 CILFFDEFDSIAPKRGHDSTGVTDRVVN 921
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 34.7 bits (78), Expect = 0.25 Identities = 20/74 (27%), Positives = 38/74 (51%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ + V + + + + EL GE AKL+R ++ + K+ Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242 Query: 572 CCLFINDLDAGAGR 613 C +FI+++DA A + Sbjct: 243 CIIFIDEIDAVASK 256
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 34.7 bits (78), Expect = 0.25 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Frame = +2 Query: 338 SLQNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELE 490 +LQ + LP+++ L G+ +G G GK+ + V A+ +SA L Sbjct: 351 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 410 Query: 491 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 601 S GE KL+R + A ++ + +FI+++D+ Sbjct: 411 SKYVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 34.7 bits (78), Expect = 0.25 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Frame = +2 Query: 338 SLQNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELE 490 +LQ + LP+++ L G+ +G G GK+ + V A+ +SA L Sbjct: 353 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 412 Query: 491 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 601 S GE KL+R + A ++ + +FI+++D+ Sbjct: 413 SKYVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
>RECA_CHRVI (O32377) Protein recA (Recombinase A)| Length = 347 Score = 34.3 bits (77), Expect = 0.32 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK+ C +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPETT 209
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 34.3 bits (77), Expect = 0.32 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + V + G+ +S E G A +R + +A Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K C +FI+++DA GAG GG + Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE 279
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 33.9 bits (76), Expect = 0.42 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +2 Query: 338 SLQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 517 S + F+ L I P + ++G G GK+ V + I + EL GE A+ Sbjct: 201 SPERFVKL-GIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGAR 259 Query: 518 LIRQRYREAADMIKKGKMCCLFINDLDAGAG 610 ++R+ + +M + K C +F +++DA G Sbjct: 260 MVRELF----EMARTKKACIIFFDEIDAIGG 286
>RECA_LISMO (Q9L723) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_GEOSL (P62215) Protein recA (Recombinase A)| Length = 338 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ +I K C +FIN + G M G + T Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETT 209
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + G+ +S E G A +R +++A Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K+ C +FI+++DA G G GG + Sbjct: 300 --KENAPCLVFIDEIDAVGRQRGVGYGGGNDE 329
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 33.5 bits (75), Expect = 0.55 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 551 MIKKGKMCCLFINDLDAGAGR 613 K C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 33.5 bits (75), Expect = 0.55 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 551 MIKKGKMCCLFINDLDAGAGR 613 K C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 33.5 bits (75), Expect = 0.55 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 370 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 427 Query: 551 MIKKGKMCCLFINDLDAGAGR 613 K C +FI++LD+ G+ Sbjct: 428 --KANAPCVIFIDELDSVGGK 446
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676 Query: 578 LFINDLDA 601 +F +++DA Sbjct: 677 IFFDEVDA 684 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + ++ + + ++A E+ SG +GE Q+ RE D C Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359 Query: 578 LFINDLDA 601 +FI+++DA Sbjct: 360 VFIDEIDA 367
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 33.5 bits (75), Expect = 0.55 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + G+ ++S E G A +R + +A Sbjct: 205 KIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA-- 262 Query: 551 MIKKGKMCCLFINDLDA-GAGRMGG 622 KK C +FI++LDA G R G Sbjct: 263 --KKQAPCIVFIDELDAIGKSRASG 285
>RECA_AERSA (P94190) Protein recA (Recombinase A)| Length = 353 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+L+ Q R+ IK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200 Query: 614 MGGTTQYT 637 M G+ + T Sbjct: 201 MFGSPETT 208
>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)| Length = 358 Score = 33.5 bits (75), Expect = 0.55 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ I K + C +FIN + G M G + T Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETT 212
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 33.5 bits (75), Expect = 0.55 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V ++ + I M+ EL GE AKL+R ++ A D + Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245 Query: 578 LFINDLDAGAGR 613 +FI+++DA A + Sbjct: 246 VFIDEIDAIASK 257
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677 Query: 578 LFINDLDA 601 +F +++DA Sbjct: 678 IFFDEVDA 685 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + ++ + + ++A E+ SG +GE + +R+ + +A C Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360 Query: 578 LFINDLDA 601 +FI+++DA Sbjct: 361 IFIDEIDA 368
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G A+L+ Q R+ I K CLFIN L G M G+ + T Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETT 222
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 33.5 bits (75), Expect = 0.55 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 K+P + + G G GK+ + G++ MS E + G AK IR + +A Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369 Query: 551 MIKKGKMCCLFINDLDAGAGR 613 + +FI++LDA G+ Sbjct: 370 --RSRAPAIIFIDELDAIGGK 388
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 33.5 bits (75), Expect = 0.55 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 +WG G GK+ + V + N I + EL + GE + IRQ + A + Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627 Query: 572 CCLFINDLDA 601 C +F ++LDA Sbjct: 628 CVIFFDELDA 637 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + ++ + I +SA + SG +GE K IR + EA + C Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301 Query: 578 LFINDLDAGAGRMGGTTQ 631 +F +++DA + G Q Sbjct: 302 VFFDEIDAITPKRDGGAQ 319
>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)| Length = 350 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETT 208
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 33.1 bits (74), Expect = 0.72 Identities = 19/75 (25%), Positives = 37/75 (49%) Frame = +2 Query: 395 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 +G G GK+ + + + +N + EL + GE +R+ +++A D K C Sbjct: 741 YGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 796 Query: 575 CLFINDLDAGAGRMG 619 +F ++LD+ A + G Sbjct: 797 VIFFDELDSVAPKRG 811
>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 33.1 bits (74), Expect = 0.72 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 +IP + + G G GK+ V + G+ +S + G A +R + A Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGG 281
>RECA_CLOAB (P58254) Protein recA (Recombinase A)| Length = 349 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ I K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPETT 208
>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)| Length = 387 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ A I K K +FIN L G M G+ + T Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223
>RECA_ACHLA (P29225) Protein recA (Recombinase A)| Length = 331 Score = 33.1 bits (74), Expect = 0.72 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +2 Query: 476 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 AG++ + + G A+++ Q R+ + +I K + +FIN + G M G + T Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPETT 209
>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)| Length = 347 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETT 207
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI++LDA Sbjct: 294 ---EKNAPAIIFIDELDA 308
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>RECA_THETN (Q8RA55) Protein recA (Recombinase A)| Length = 342 Score = 32.7 bits (73), Expect = 0.94 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ A + K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPETT 208
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +2 Query: 395 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 852 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 907 Query: 575 CLFINDLDAGAGRMG 619 +F ++LD+ A + G Sbjct: 908 VIFFDELDSVAPKRG 922
>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)| Length = 350 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 32.7 bits (73), Expect = 0.94 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +2 Query: 395 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 +G G GK+ + V +N + EL + GE +R+ ++ A D K C Sbjct: 762 YGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPC 817 Query: 575 CLFINDLDAGAGRMG 619 +F ++LD+ A + G Sbjct: 818 VIFFDELDSVAPKRG 832
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271 Query: 572 CCLFINDLDAGAG 610 C +F +++DA G Sbjct: 272 CLIFFDEIDAVGG 284
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +2 Query: 395 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 878 YGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 933 Query: 575 CLFINDLDAGAGRMG 619 +F ++LD+ A + G Sbjct: 934 VIFFDELDSVAPKRG 948
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 32.7 bits (73), Expect = 0.94 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 314 ---EKNSPAIIFIDEIDS 328
>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)| Length = 349 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 32.7 bits (73), Expect = 0.94 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262 Query: 548 DMIKKGKMCCLFINDLDA 601 + K+ C +FI+++DA Sbjct: 263 QLAKEKSPCIIFIDEIDA 280
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ V + G+N I + E+ + G + IR+ + A + K Sbjct: 736 LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791 Query: 572 CCLFINDLDAGAGRMG----GTTQYTVN 643 C LF ++ D+ A + G G T VN Sbjct: 792 CILFFDEFDSIAPKRGHDSTGVTDRVVN 819
>RECA_ENTFA (P42444) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPETT 208
>RECA_CHLAU (O52394) Protein recA (Recombinase A)| Length = 351 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +2 Query: 428 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 CE++ I+ I++ + GE+ G A+L+ Q R+ + I K + Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190 Query: 575 CLFINDLDAGAGRMGGTTQYT 637 +FIN L G M GT + T Sbjct: 191 VIFINQLRMKIGVMLGTPETT 211
>RECA_PORGI (P77925) Protein recA (Recombinase A)| Length = 340 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G A+L+ Q R+ I K C+FIN L G + G + T Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPETT 217
>RECA_ENTMU (Q6KCJ3) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTHR (Q6KCJ5) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ + V I ++A EL GE A+L+R+ + ++ ++ Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273 Query: 572 CCLFINDLDA-GAGRMGGTT 628 +FI+++DA GA RM T Sbjct: 274 SIIFIDEIDAIGARRMRDAT 293
>RECA_ENTFC (Q6KCJ6) Protein recA (Recombinase A)| Length = 349 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/89 (25%), Positives = 43/89 (48%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 + F+ L I+ P + ++G G GK+ V + I + EL GE A+++ Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 256 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAG 610 R+ + +M + K C +F +++DA G Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/89 (25%), Positives = 43/89 (48%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 + F+ L I+ P + ++G G GK+ V + I + EL GE A+++ Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 256 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAG 610 R+ + +M + K C +F +++DA G Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-MIKKGKM 571 G G GK++ + + M + ++ A L E+G G+ + + QR +AAD + + + Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213 Query: 572 CCLFINDLDAGAGRMGGTTQYT 637 ++I+++D A + G T T Sbjct: 214 GIIYIDEIDKIARKSGENTSIT 235
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/89 (25%), Positives = 43/89 (48%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 + F+ L I+ P + ++G G GK+ V + I + EL GE A+++ Sbjct: 199 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 257 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAG 610 R+ + +M + K C +F +++DA G Sbjct: 258 RELF----EMARTKKACLIFFDEIDAIGG 282
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264 Query: 572 CCLFINDLDA 601 C +FI+++DA Sbjct: 265 CIIFIDEIDA 274
>RECA_VIBPA (Q87LR1) Protein recA (Recombinase A)| Length = 347 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 293 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 350 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K C +FI+++DA GAG GG + Sbjct: 351 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 380
>RECA_VIBCH (P45383) Protein recA (Recombinase A)| Length = 354 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +2 Query: 377 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 553 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 554 IKKGKM 571 IK+GK+ Sbjct: 57 IKEGKI 62
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +2 Query: 377 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 553 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 554 IKKGKM 571 IK+GK+ Sbjct: 57 IKEGKI 62
>RECA_VIBAN (P26348) Protein recA (Recombinase A)| Length = 348 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 341 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K C +FI+++DA GAG GG + Sbjct: 342 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 371
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 338 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K C +FI+++DA GAG GG + Sbjct: 339 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 368
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ I K K +FIN + G M G+ + T Sbjct: 179 GEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPETT 231
>RECA_LACPE (Q6KCK3) Protein recA (Recombinase A)| Length = 378 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/75 (25%), Positives = 35/75 (46%) Frame = +2 Query: 395 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 +G G GK+ + + +N + EL + GE +R+ ++ A D K C Sbjct: 858 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD----AKPC 913 Query: 575 CLFINDLDAGAGRMG 619 +F ++LD+ A + G Sbjct: 914 VVFFDELDSVAPKRG 928
>RECA_BORHE (Q8VS69) Protein recA (Recombinase A)| Length = 356 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G A+L+ + R+ ++ K C +FIN L G M G + T Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPETT 222
>RECA_BORBU (Q59180) Protein recA (Recombinase A)| Length = 365 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +2 Query: 455 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 634 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPET 223 Query: 635 T 637 T Sbjct: 224 T 224
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265 Query: 572 CCLFINDLDA 601 C +FI+++DA Sbjct: 266 CIIFIDEIDA 275
>RECA_LACPL (Q88UZ4) Protein recA (Recombinase A)| Length = 380 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/89 (25%), Positives = 43/89 (48%) Frame = +2 Query: 344 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 523 + F+ L I+ P + ++G G GK+ V + I + EL GE A+++ Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMV 256 Query: 524 RQRYREAADMIKKGKMCCLFINDLDAGAG 610 R+ + +M + K C +F +++DA G Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETT 209
>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)| Length = 349 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)| Length = 349 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/86 (26%), Positives = 42/86 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303 Query: 548 DMIKKGKMCCLFINDLDAGAGRMGGT 625 +K +FI+++D+ A + T Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKT 326
>RECA_BORGA (Q662N0) Protein recA (Recombinase A)| Length = 362 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +2 Query: 455 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 634 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPET 223 Query: 635 T 637 T Sbjct: 224 T 224
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + +S + G A +R + +A Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 266
>RECA_PSEOL (Q9R9U2) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEIGDSHVGLAARMMSQAMRKITGNLKNSNTMCIFINQIRMKIGVMFGNPETT 208
>RECA_PHOPR (Q6LMU2) Protein recA (Recombinase A)| Length = 352 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRMKIGVMFGNPETT 208
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 +IP + + G G GK+ + + G+ +S + G A +R + A Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 KK C +FI+++DA GAG GG Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 276
>RECA1_MYXXA (P48291) Protein recA 1 (Recombinase A 1)| Length = 342 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + C +FIN + G M G + T Sbjct: 159 GEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETT 211
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 31.2 bits (69), Expect = 2.7 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252 Query: 548 DMIKKGKMCCLFINDLDA 601 + K+ C +FI+++DA Sbjct: 253 LLAKEKSPCIIFIDEIDA 270
>RECA_STRRM (P95846) Protein recA (Recombinase A)| Length = 376 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRCT (P41055) Protein recA (Recombinase A) (Fragment)| Length = 142 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 89 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 141
>RECA_STRAW (Q82KB1) Protein recA (Recombinase A)| Length = 377 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_ENTGA (Q6KCK0) Protein recA (Recombinase A)| Length = 348 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETT 208
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -1 Query: 302 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 126 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + G G GK+ V + G+ +A E G A +R + A Sbjct: 261 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENA-- 318 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 K C +FI+++DA GAG GG + Sbjct: 319 --KSKAPCIVFIDEIDAVGRQRGAGLGGGNDE 348
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -2 Query: 214 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 68 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>RECA_STRAM (P41054) Protein recA (Recombinase A)| Length = 372 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_TREDE (P62221) Protein recA (Recombinase A)| Length = 414 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +2 Query: 455 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 634 + P AGE+ + G A+L+ Q R+ +I K +FIN + G M G+ + Sbjct: 161 LTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCMIIFINQIRMKIGVMFGSPET 220 Query: 635 T 637 T Sbjct: 221 T 221
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 547 KIP + G G GK+ + + + I ++ E LE PA R R+ Sbjct: 205 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPA-----RVRDMF 259 Query: 548 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 M +K C LFI+++DA G G +GG ++ Sbjct: 260 AMARKHAPCILFIDEIDAIGRKRGRGHLGGQSE 292
>RECA_STRLI (P48294) Protein recA (Recombinase A)| Length = 374 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRCO (O50487) Protein recA (Recombinase A)| Length = 374 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_CHRVO (Q7NXL9) Protein recA (Recombinase A)| Length = 350 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +2 Query: 428 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 C+++ G++ I++ + GE+ + G A+L+ Q R+ IK+ Sbjct: 130 CDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTL 189 Query: 575 CLFINDLDAGAGRMGGTTQYT 637 +FIN + G M G + T Sbjct: 190 VIFINQIRMKIGVMFGNPETT 210
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/80 (26%), Positives = 38/80 (47%) Frame = +2 Query: 359 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 538 LP + L++GI +G GKS + + + + + + G L G GE R R Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308 Query: 539 EAADMIKKGKMCCLFINDLD 598 + D+ + C L+I+++D Sbjct: 309 QMIDVAETLSPCILWIDEMD 328
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 572 CCLFINDLDAGAGR 613 +FI++LD+ A R Sbjct: 254 SIIFIDELDSIAAR 267
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +2 Query: 392 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 571 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 572 CCLFINDLDAGAGR 613 +FI++LD+ A R Sbjct: 254 SIIFIDELDSIAAR 267
>RECA_CLOPE (P94666) Protein recA (Recombinase A)| Length = 352 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ I K +FIN L G M G + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETT 211
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 30.8 bits (68), Expect = 3.6 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 547 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392 Query: 548 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 + +K C LFI+++DA G G GG ++ Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 425
>RECA_RUMAL (P49985) Protein recA (Recombinase A) (Fragment)| Length = 121 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 66 GEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETT 118
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 547 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 422 C+L+ P+P G L+ + TL L+G H G + LG+ K ++ Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 30.8 bits (68), Expect = 3.6 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 547 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393 Query: 548 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 + +K C LFI+++DA G G GG ++ Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 426
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 30.4 bits (67), Expect = 4.7 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 KIP + + G G GK+ + + + + +S + G A +R + A Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGG 622 +K C +FI+++DA GAG GG Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG 267
>RECA_SYMTH (Q67NU3) Protein recA (Recombinase A)| Length = 350 Score = 30.4 bits (67), Expect = 4.7 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G A+L+ Q R+ I K K +FIN + G M G + T Sbjct: 159 GEMGDSFVGLQARLMSQALRKLTGAISKSKAVVIFINQIREKVGVMFGNPETT 211
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +2 Query: 377 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 556 PL + I G GK QCEL+ K G+ + +SAG+L + + R A + + Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117 Query: 557 KKGKM 571 +KG++ Sbjct: 118 EKGQL 122
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 30.4 bits (67), Expect = 4.7 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 541 K P ++ + GG G GK QC + G +SAG+L E + E +I+ Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64 Query: 542 AADMIKKGKM 571 +MIK+GK+ Sbjct: 65 --NMIKEGKI 72
>RECA_MYCGE (P47581) Protein recA (Recombinase A)| Length = 340 Score = 30.4 bits (67), Expect = 4.7 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 G +E G A+++ + R ++ K C LFIN L G M G + T Sbjct: 158 GTIEEQTIGLHARMMSKGLRRIQSILPDSKTCVLFINQLREKPGVMFGNNEVT 210
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 30.4 bits (67), Expect = 4.7 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 I+ P ++G G GK+ A+ + ++A +L GE AKL+ R+A Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267 Query: 548 DMIKKGKMCCLFINDLDA 601 + K+ +FI++LDA Sbjct: 268 ALAKEKAPTIIFIDELDA 285
>RECA_MAGMG (P16034) Protein recA (Recombinase A)| Length = 344 Score = 30.4 bits (67), Expect = 4.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + K K +FIN + G M G + T Sbjct: 154 GEMGDNHMGLHARLMSQALRKLTGSVSKSKTIVIFINQIRMKIGVMFGNPETT 206
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 30.4 bits (67), Expect = 4.7 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 IK P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299 Query: 548 DMIKKGKMCCLFINDLDA 601 +K + LFI+++DA Sbjct: 300 ---EKNQPAILFIDEIDA 314
>RECA_LACHE (Q02348) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.4 bits (67), Expect = 4.7 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 622 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGIMFG 103
>RECA_AQUAE (O67905) Protein recA (Recombinase A)| Length = 345 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G+ A+L+ Q R+ + K +FIN + G M G + T Sbjct: 159 GEMGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETT 211
>RECA_STAAW (P68846) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAU (P68845) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAS (Q6G9S8) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAR (Q6GHF0) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAN (P68844) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAM (P68843) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAC (Q5HGE6) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 6.1 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMG 454 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>RECA_STAHJ (Q4L5Y8) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_LEGPN (Q05358) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPL (Q5WVQ0) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPH (Q5ZUJ7) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPA (Q5X4B5) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 538 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55 Query: 539 EAADMIKKGKM 571 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298 Query: 548 DMIKKGKMCCLFINDLDA 601 +K LFI+++DA Sbjct: 299 ---EKNSPAILFIDEIDA 313
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 KK +FI+++DA G G GG + Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +2 Query: 371 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 550 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 551 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 KK +FI+++DA G G GG + Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
>RECA_STAES (Q8CPF4) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAEQ (Q5HPQ6) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 622 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLSGTIAKTKTIAIFINQIREKVGVMFG 103
>RECA_CLOBE (P42441) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 625 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ Sbjct: 56 GEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKLGFMFGS 104
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 347 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 487 N L +P+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54
>RECA_PSEST (Q07809) Protein recA (Recombinase A)| Length = 347 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+L+ Q R+ IK +FIN + G M G+ + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETT 208
>RECA_PASMU (P95526) Protein recA (Recombinase A)| Length = 354 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+L+ Q R+ IK +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGV 202 Query: 614 MGGTTQYT 637 M G + T Sbjct: 203 MFGNPETT 210
>RECA_VIBNA (Q6XZ07) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ Q R+ +K+ C+FI + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFIKQIRMKIGVMFGNPETT 208
>RECA_NEIEG (O86382) Protein recA (Recombinase A) (Fragment)| Length = 237 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Frame = +2 Query: 428 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 574 C+++ G++ +++ + G++ + G A+L+ Q R+ IKK Sbjct: 89 CDMLVRSGGVDMVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTL 148 Query: 575 CLFINDLDAGAGRMGGTTQYT 637 +FIN + G M G+ + T Sbjct: 149 VVFINQIRMKIGVMFGSPETT 169
>RECA_MESFL (Q6F1R0) Protein recA (Recombinase A)| Length = 333 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ + G A+++ + R+ +I K K +FIN L G M G + T Sbjct: 160 GEMSDQSIGLQARMMSKALRKLNGVISKSKTTVIFINQLREKIGIMFGNPETT 212
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 8.0 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +2 Query: 356 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 535 T+ KIP + + G G GK+ + + + + ++ E G A +R + Sbjct: 212 TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271 Query: 536 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 631 ++A++ C +FI+++DA GAG GG + Sbjct: 272 KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE 304
>RECA_PROVU (P26346) Protein recA (Recombinase A)| Length = 325 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGV 202 Query: 614 MGGTTQYT 637 M G + T Sbjct: 203 MFGNPETT 210
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 578 LFINDLDAGAGRMGGTTQY 634 +FI+++D+ R G + ++ Sbjct: 302 IFIDEIDSICSRRGTSDEH 320
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 578 LFINDLDAGAGRMGGTTQY 634 +FI+++D+ R G + ++ Sbjct: 302 IFIDEIDSICSRRGTSDEH 320
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 29.6 bits (65), Expect = 8.0 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 538 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 539 EAADMIKKGKM 571 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>RECA_AGRT5 (P33156) Protein recA (Recombinase A)| Length = 363 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 479 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 637 GE+ G A+L+ Q R+ I K K +FIN + G M G+ + T Sbjct: 168 GEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETT 220
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>RECA_SHEON (Q8EBS0) Protein recA (Recombinase A)| Length = 357 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGV 202 Query: 614 MGGTTQYT 637 M G + T Sbjct: 203 MFGNPETT 210
>RECA_ERWCT (Q6D1S8) Protein recA (Recombinase A)| Length = 357 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +2 Query: 434 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 613 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGV 202 Query: 614 MGGTTQYT 637 M G + T Sbjct: 203 MFGNPETT 210
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 29.6 bits (65), Expect = 8.0 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + I + EL + GE A+L+R+ +R A + Sbjct: 180 GPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS----I 235 Query: 578 LFINDLDAGAGR 613 LFI+++DA A + Sbjct: 236 LFIDEIDAIASK 247
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +2 Query: 368 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 547 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 548 DMIKKGKMCCLFINDLDA 601 +K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +2 Query: 398 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 577 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 248 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 303 Query: 578 LFINDLDAGAGRMGGTTQY 634 +FI+++D+ R G + ++ Sbjct: 304 IFIDEIDSICSRRGTSDEH 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,221,677 Number of Sequences: 219361 Number of extensions: 2003827 Number of successful extensions: 6542 Number of sequences better than 10.0: 204 Number of HSP's better than 10.0 without gapping: 6332 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6516 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
