>ITAE_MOUSE (Q60677) Integrin alpha-E precursor (Integrin alpha M290) (CD103|
            antigen) [Contains: Integrin alpha-E light chain;
            Integrin alpha-E heavy chain]
          Length = 1167

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -2

Query: 265  TNNDSFNMQKEPTFTRNRALRP*RALQNKSIQSPTLVLISLRWPTVPSSTSALSYSAGHQ 86
            T N S     E ++  N AL   R LQ K IQ P    +    P   +S   ++   GH 
Sbjct: 844  TMNISLTNSGEDSYMTNMALNYPRNLQFKKIQKPVSPDVQCDDPKPVASVLVMNCKIGHP 903

Query: 85   VLQQ 74
            +L++
Sbjct: 904  ILKR 907

>YND4_YEAST (P53963) Hypothetical 69.4 kDa protein in NCE3-HHT2 intergenic|
           region
          Length = 612

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 259 NDSFNMQKEPTFTRNRALRP*RALQ-NKSIQSPTLVLISLRWPTVPSSTSALSYSA 95
           NDS N+    + + NRA+ P   +Q N +  SPT    S    +VPS TS++S S+
Sbjct: 155 NDSCNVMLSSS-SHNRAMLPPSLVQRNNATTSPTTDSASENNESVPSLTSSVSTSS 209

>AOX2_AERPE (Q9YDX7) Heme-copper oxidase subunit 2 (EC 1.9.3.-) (Heme-copper|
           oxidase subunit II)
          Length = 234

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +2

Query: 149 DKHQRWRLYRLILQSPLRSKRPVSSKSRFFLHVEAVIV 262
           D+    R+YR++++S      PVS KS++ L V  +IV
Sbjct: 49  DQGTAGRIYRIMVES------PVSGKSKYLLFVTGIIV 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,802,584
Number of Sequences: 219361
Number of extensions: 649525
Number of successful extensions: 1732
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)