| Clone Name | baal41j20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY028422.1| Oryza sativa triose phosphate/phosphate translocator mRNA, complete cds Length = 1541 Score = 192 bits (97), Expect = 2e-46 Identities = 117/124 (94%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 358 ttcttcatgtggtacttcttgaacgttatattcaacatcctcaacaagaagatctacaac 417 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 ||||||||||||||||||||||| || |||||||||||||||||||| || ||||||||| Sbjct: 418 tacttcccctacccatactttgtttcggtgatccatctacttgtgggagttgtgtactgc 477 Query: 121 ctcc 124 |||| Sbjct: 478 ctcc 481
>gb|AF314182.2|AF314182 Triticum aestivum triose phosphate translocator (tpt1) mRNA, complete cds Length = 1484 Score = 192 bits (97), Expect = 2e-46 Identities = 117/124 (94%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 313 ttcttcatgtggtactttctgaatgtgatattcaacatcctcaacaagaagatctacaac 372 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 ||||||||||||||||||||||| || |||||||||||||||||||| || ||||||||| Sbjct: 373 tacttcccctacccatactttgtttcggtgatccatctacttgtgggagttgtgtactgc 432 Query: 121 ctcc 124 |||| Sbjct: 433 ctcc 436
>emb|Z26595.1|CHZMCPT Z.mays zmcpt mRNA triose phosphate/phosphate translocator Length = 1588 Score = 167 bits (84), Expect = 9e-39 Identities = 113/123 (91%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 366 ttcttcatgtggtacttcctcaacgtcatattcaacatcctcaacaagaagatctacaac 425 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 |||||||| |||||||||||||| ||| ||||||||||| | ||||| ||||| |||||| Sbjct: 426 tacttcccatacccatactttgtgtccttgatccatctagtagtgggtgtcgtatactgc 485 Query: 121 ctc 123 ||| Sbjct: 486 ctc 488
>gb|AY103868.1| Zea mays PCO116159 mRNA sequence Length = 1612 Score = 167 bits (84), Expect = 9e-39 Identities = 113/123 (91%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 379 ttcttcatgtggtacttcctcaacgtcatattcaacatcctcaacaagaagatctacaac 438 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 ||||||||||| ||||||||||| ||| ||||||||||| | ||||| ||||| |||||| Sbjct: 439 tacttcccctatccatactttgtgtccttgatccatctagtagtgggtgtcgtatactgc 498 Query: 121 ctc 123 ||| Sbjct: 499 ctc 501
>ref|NM_188702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 159 bits (80), Expect = 2e-36 Identities = 112/123 (91%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| ||||||| ||||||||||||||||| | |||||| |||||| Sbjct: 358 ttcttcatgtggtacttcttgaacgttatattcaacatcctcaataagaagatatacaac 417 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 ||||||||||| ||||||||||| || ||||||||||| ||||| || |||||||||||| Sbjct: 418 tacttcccctatccatactttgtgtcggtgatccatctgcttgttggtgtcgtgtactgc 477 Query: 121 ctc 123 ||| Sbjct: 478 ctc 480
>dbj|AK099799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097M22, full insert sequence Length = 1605 Score = 159 bits (80), Expect = 2e-36 Identities = 112/123 (91%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| ||||||| ||||||||||||||||| | |||||| |||||| Sbjct: 390 ttcttcatgtggtacttcttgaacgttatattcaacatcctcaataagaagatatacaac 449 Query: 61 tacttcccctacccatactttgtctccgtgatccatctacttgtgggggtcgtgtactgc 120 ||||||||||| ||||||||||| || ||||||||||| ||||| || |||||||||||| Sbjct: 450 tacttcccctatccatactttgtgtcggtgatccatctgcttgttggtgtcgtgtactgc 509 Query: 121 ctc 123 ||| Sbjct: 510 ctc 512
>dbj|AK059788.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D11, full insert sequence Length = 1464 Score = 101 bits (51), Expect = 5e-19 Identities = 86/98 (87%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||| || |||||||||||||| |||||||| |||| |||||||| | || Sbjct: 321 ttcttcatgtggtattttctgaacgtgatatttaacatccttaacaagaagatcttcgac 380 Query: 61 tacttcccctacccatactttgtctccgtgatccatct 98 ||||||||||| ||||| ||||| || |||| |||||| Sbjct: 381 tacttcccctatccatattttgtgtcggtgagccatct 418
>gb|AF223358.1| Mesembryanthemum crystallinum triose phosphate/phosphate translocator precursor (TPT) mRNA, complete cds Length = 1458 Score = 97.6 bits (49), Expect = 7e-18 Identities = 84/96 (87%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||| Sbjct: 349 ttcttcatgtggtacttcttgaacgtgatattcaacatactgaacaagaagatctacaat 408 Query: 61 tacttcccctacccatactttgtctccgtgatccat 96 ||||| || || || |||||||| || || |||||| Sbjct: 409 tactttccatatccttactttgtgtcagtcatccat 444
>emb|X13754.1|SOPHTRAN Spinach mRNA for chloroplast phosphate translocator protein Length = 1432 Score = 97.6 bits (49), Expect = 7e-18 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||| Sbjct: 337 ttcttcatgtggtacttcttgaacgtgatattcaacattcttaacaagaagatctacaat 396 Query: 61 tacttccc 68 |||||||| Sbjct: 397 tacttccc 404
>gb|AY161290.1| Brassica rapa subsp. pekinensis putative phosphate/triose-phosphate translocator mRNA, partial cds Length = 358 Score = 95.6 bits (48), Expect = 3e-17 Identities = 71/79 (89%) Strand = Plus / Plus Query: 5 tcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactact 64 |||||||||||||| |||||||||| ||||||||||| |||| |||||||||||| |||| Sbjct: 4 tcatgtggtacttcttgaacgtgattttcaacatccttaacaagaagatctacaattact 63 Query: 65 tcccctacccatactttgt 83 |||| ||||| || ||||| Sbjct: 64 tcccttacccctattttgt 82
>gb|U13630.1|BOU13630 Brassica oleracea var. botrytis chloroplast phosphate/triose-phosphate translocator cTPT precursor (BOCTPT) mRNA, complete cds Length = 1498 Score = 95.6 bits (48), Expect = 3e-17 Identities = 71/79 (89%) Strand = Plus / Plus Query: 5 tcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactact 64 |||||||||||||| |||||||||| ||||||||||| |||| |||||||||||| |||| Sbjct: 334 tcatgtggtacttcttgaacgtgattttcaacatccttaacaagaagatctacaattact 393 Query: 65 tcccctacccatactttgt 83 |||| ||||| || ||||| Sbjct: 394 tcccttacccctattttgt 412
>emb|X75088.1|NTRNPHTR Nicotiana tabacum mRNA for phosphate translocator Length = 1549 Score = 91.7 bits (46), Expect = 4e-16 Identities = 60/65 (92%) Strand = Plus / Plus Query: 4 ttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactac 63 ||||||||||| || ||||| |||||||||||||||||||||| |||||||||||| ||| Sbjct: 359 ttcatgtggtattttctgaatgtgatattcaacatcctcaacaagaagatctacaattac 418 Query: 64 ttccc 68 ||||| Sbjct: 419 ttccc 423
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 7e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 11 ggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccct 70 |||||||| ||||||| ||||||||||||||||| | |||||| |||||||||||||||| Sbjct: 7720250 ggtacttcttgaacgttatattcaacatcctcaataagaagatatacaactacttcccct 7720191 Query: 71 acccata 77 | ||||| Sbjct: 7720190 atccata 7720184 Score = 52.0 bits (26), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 78 ctttgtctccgtgatccatctacttgtgggggtcgtgtactgcctc 123 |||||| || ||||||||||| ||||| || ||||||||||||||| Sbjct: 7720058 ctttgtgtcggtgatccatctgcttgttggtgtcgtgtactgcctc 7720013
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 87.7 bits (44), Expect = 7e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 11 ggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccct 70 |||||||| ||||||| ||||||||||||||||| | |||||| |||||||||||||||| Sbjct: 22831 ggtacttcttgaacgttatattcaacatcctcaataagaagatatacaactacttcccct 22772 Query: 71 acccata 77 | ||||| Sbjct: 22771 atccata 22765 Score = 52.0 bits (26), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 78 ctttgtctccgtgatccatctacttgtgggggtcgtgtactgcctc 123 |||||| || ||||||||||| ||||| || ||||||||||||||| Sbjct: 22639 ctttgtgtcggtgatccatctgcttgttggtgtcgtgtactgcctc 22594
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 87.7 bits (44), Expect = 7e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 11 ggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccct 70 |||||||| ||||||| ||||||||||||||||| | |||||| |||||||||||||||| Sbjct: 130826 ggtacttcttgaacgttatattcaacatcctcaataagaagatatacaactacttcccct 130767 Query: 71 acccata 77 | ||||| Sbjct: 130766 atccata 130760 Score = 52.0 bits (26), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 78 ctttgtctccgtgatccatctacttgtgggggtcgtgtactgcctc 123 |||||| || ||||||||||| ||||| || ||||||||||||||| Sbjct: 130634 ctttgtgtcggtgatccatctgcttgttggtgtcgtgtactgcctc 130589
>gb|BT013330.1| Lycopersicon esculentum clone 135053F, mRNA sequence Length = 1501 Score = 83.8 bits (42), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||| || ||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 339 ttcttcatgtggtattttctgaatgtgatattcaatatcctcaacaagaagatctacaat 398 Query: 61 tactt 65 ||||| Sbjct: 399 tactt 403
>emb|X92656.1|LETPT L.esculentum mRNA for triose phosphate translocator Length = 993 Score = 83.8 bits (42), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||| || ||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 94 ttcttcatgtggtattttctgaatgtgatattcaatatcctcaacaagaagatctacaat 153 Query: 61 tactt 65 ||||| Sbjct: 154 tactt 158
>emb|X67045.1|STTPTMR S.tuberosum mRNA TPT for triose phosphate translocator Length = 1567 Score = 83.8 bits (42), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||| || ||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 439 ttcttcatgtggtattttctgaatgtgatattcaatatcctcaacaagaagatctacaat 498 Query: 61 tactt 65 ||||| Sbjct: 499 tactt 503
>ref|NM_001036940.1| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.3 mRNA, complete cds Length = 2000 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 690 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 749 Query: 61 tacttccc 68 |||||||| Sbjct: 750 tacttccc 757
>ref|NM_180807.1| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); antiporter/ triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.1 mRNA, complete cds Length = 2048 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 705 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 764 Query: 61 tacttccc 68 |||||||| Sbjct: 765 tacttccc 772
>ref|NM_123979.2| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.2 mRNA, complete cds Length = 2055 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 712 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 771 Query: 61 tacttccc 68 |||||||| Sbjct: 772 tacttccc 779
>gb|AY091414.1| Arabidopsis thaliana putative phosphate/triose-phosphate translocator precursor (At5g46110) mRNA, complete cds Length = 1264 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 334 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 393 Query: 61 tacttccc 68 |||||||| Sbjct: 394 tacttccc 401
>gb|AY050811.1| Arabidopsis thaliana putative phosphate/triose-phosphate translocator precursor protein (At5g46110) mRNA, complete cds Length = 1600 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 376 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 435 Query: 61 tacttccc 68 |||||||| Sbjct: 436 tacttccc 443
>emb|Z26632.1|CHFTCPT F.trinervia ftcpt mRNA for triose phosphate/phosphate translocator Length = 1441 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 ||||||||||||||||| ||||| || || |||||||||||||||| ||| |||||||| Sbjct: 381 ttcttcatgtggtactttctgaatgtcatcttcaacatcctcaacaagaaaatctacaat 440 Query: 61 tacttccc 68 |||||||| Sbjct: 441 tacttccc 448
>gb|AY056790.1| Arabidopsis thaliana AT5g46110/MCL19_16 mRNA, complete cds Length = 1480 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 359 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 418 Query: 61 tacttccc 68 |||||||| Sbjct: 419 tacttccc 426
>gb|AY037211.1| Arabidopsis thaliana AT5g46110/MCL19_16 mRNA, complete cds Length = 1490 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 369 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 428 Query: 61 tacttccc 68 |||||||| Sbjct: 429 tacttccc 436
>emb|BX832228.1|CNS09ZKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1419 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 342 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 401 Query: 61 tacttccc 68 |||||||| Sbjct: 402 tacttccc 409
>gb|BT002683.1| Arabidopsis thaliana At5g46110/MCL19_16 gene, complete cds Length = 1233 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 334 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 393 Query: 61 tacttccc 68 |||||||| Sbjct: 394 tacttccc 401
>gb|AF097648.1|AF097648 Arabidopsis thaliana phosphate/triose-phosphate translocator precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1478 Score = 81.8 bits (41), Expect = 4e-13 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| || Sbjct: 347 ttcttcatgtggtacttcttgaatgtgattttcaacatccttaacaagaagatctataat 406 Query: 61 tacttccc 68 |||||||| Sbjct: 407 tacttccc 414
>emb|Z26633.1|CHFPCPT F.pringlei fpcpt mRNA for triose phosphate/phosphate translocator Length = 1317 Score = 73.8 bits (37), Expect = 1e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 ||||||||||||||||| ||||| || || |||||||| ||||||| ||| |||||||| Sbjct: 342 ttcttcatgtggtactttctgaatgtcatcttcaacatactcaacaagaaaatctacaat 401 Query: 61 tacttccc 68 |||||||| Sbjct: 402 tacttccc 409
>gb|AY087499.1| Arabidopsis thaliana clone 36058 mRNA, complete sequence Length = 1460 Score = 73.8 bits (37), Expect = 1e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 |||||||||||||||||| | || ||||| ||||||||||| |||| ||||||||| || Sbjct: 374 ttcttcatgtggtacttcttaaatgtgattttcaacatccttaacaagaagatctataat 433 Query: 61 tacttccc 68 |||||||| Sbjct: 434 tacttccc 441
>emb|X68077.1|PSPTCPA P. sativum mRNA for phosphate translocator Length = 1496 Score = 73.8 bits (37), Expect = 1e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 ||||||| ||||||||| |||| ||||| |||||||||||||||| ||||||||| ||| Sbjct: 352 ttcttcacttggtacttcttgaatgtgattttcaacatcctcaacaagaagatctataac 411 Query: 61 tacttccc 68 || ||||| Sbjct: 412 tatttccc 419
>emb|X54639.1|PSCIRP36 P. sativum mRNA for chloroplast import receptor p36 Length = 1490 Score = 73.8 bits (37), Expect = 1e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ttcttcatgtggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaac 60 ||||||| ||||||||| |||| ||||| |||||||||||||||| ||||||||| ||| Sbjct: 347 ttcttcacttggtacttcttgaatgtgattttcaacatcctcaacaagaagatctataac 406 Query: 61 tacttccc 68 || ||||| Sbjct: 407 tatttccc 414
>dbj|AK073395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E21, full insert sequence Length = 1467 Score = 73.8 bits (37), Expect = 1e-10 Identities = 54/60 (90%) Strand = Plus / Plus Query: 19 ctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccctacccatac 78 |||||||||||||| |||||||| |||| |||||||| | ||||||||||||| |||||| Sbjct: 377 ctgaacgtgatatttaacatccttaacaagaagatcttcgactacttcccctatccatac 436
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Plus Query: 19 ctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccctacccata 77 |||||||||||||| |||||||| |||| |||||||| | ||||||||||||| ||||| Sbjct: 81002 ctgaacgtgatatttaacatccttaacaagaagatcttcgactacttcccctatccata 81060
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Plus Query: 19 ctgaacgtgatattcaacatcctcaacangaagatctacaactacttcccctacccata 77 |||||||||||||| |||||||| |||| |||||||| | ||||||||||||| ||||| Sbjct: 8502732 ctgaacgtgatatttaacatccttaacaagaagatcttcgactacttcccctatccata 8502790
>dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCL19 Length = 84510 Score = 61.9 bits (31), Expect = 4e-07 Identities = 51/58 (87%) Strand = Plus / Plus Query: 11 ggtacttcctgaacgtgatattcaacatcctcaacangaagatctacaactacttccc 68 |||||||| |||| ||||| ||||||||||| |||| ||||||||| || |||||||| Sbjct: 55824 ggtacttcttgaatgtgattttcaacatccttaacaagaagatctataattacttccc 55881
>emb|AJ277274.1|ATH277274 Arabidopsis thaliana T-DNA insertion line TPT1-1 Length = 750 Score = 50.1 bits (25), Expect = 0.002 Identities = 39/44 (88%) Strand = Plus / Plus Query: 25 gtgatattcaacatcctcaacangaagatctacaactacttccc 68 ||||| ||||||||||| |||| ||||||||| || |||||||| Sbjct: 680 gtgattttcaacatccttaacaagaagatctataattacttccc 723
>emb|AL390241.19| Human DNA sequence from clone RP11-343L14 on chromosome 1 Contains the 3' end of a ribosomal protein L26 (RPL26) pseudogene, a eukaryotic translation initiation factor 2 subunit 2 beta 38kDa (EIF2S2) pseudogene, the 5' end of the TRIM33 gene for tripartite motif-containing 33, a pyruvate kinase muscle (PKM2) pseudogene, the BCAS2 gene for breast carcinoma amplified sequence 2, the 3' end of the gene for a novel protein (FLJ37099) and a CpG island, complete sequence Length = 123501 Score = 44.1 bits (22), Expect = 0.093 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 acttcccctacccatactttgt 83 |||||||||||||||||||||| Sbjct: 114663 acttcccctacccatactttgt 114684
>gb|DQ354537.1| Phakopsora pachyrhizi internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence Length = 1122 Score = 42.1 bits (21), Expect = 0.37 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 tcaacatcctcaacangaagatctacaa 59 |||||||||||| || |||||||||||| Sbjct: 664 tcaacatcctcagcaagaagatctacaa 637
>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete sequence Length = 182200 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctgaacgtgatattcaacat 38 |||||||||||||||||||| Sbjct: 176802 ctgaacgtgatattcaacat 176783
>gb|AC156945.2| Pan troglodytes BAC clone CH251-464H12 from chromosome unknown, complete sequence Length = 184973 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctgaacgtgatattcaacat 38 |||||||||||||||||||| Sbjct: 172929 ctgaacgtgatattcaacat 172948
>ref|XM_309957.2| Anopheles gambiae str. PEST ENSANGP00000004412 (ENSANGG00000003472), partial mRNA Length = 3778 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ttcatgtggtacttcctgaa 23 |||||||||||||||||||| Sbjct: 1306 ttcatgtggtacttcctgaa 1325
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 ttcatgtggtacttcctga 22 ||||||||||||||||||| Sbjct: 3859229 ttcatgtggtacttcctga 3859247
>emb|AL109823.23|HS1057B20 Human DNA sequence from clone RP5-1057B20 on chromosome 20q11.21-12 Contains part of the gene for KIAA0406 protein, the gene for a novel protein similar to D. melanogaster CG9018 protein and a CpG island, complete sequence Length = 138675 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 atattcaacatcctcaaca 46 ||||||||||||||||||| Sbjct: 72676 atattcaacatcctcaaca 72658
>emb|BX023639.1|CNS08QEJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36AE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 840 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 580 gtggtacttcctgaacgtg 598
>emb|BX018827.1|CNS08MOV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28CD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 738 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 593 gtggtacttcctgaacgtg 575
>emb|BX018826.1|CNS08MOU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28CD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 737 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 597 gtggtacttcctgaacgtg 615
>emb|BX018579.1|CNS08MHZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 922 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 627 gtggtacttcctgaacgtg 609
>emb|BX018578.1|CNS08MHY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 937 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 586 gtggtacttcctgaacgtg 604
>emb|BX007385.1|CNS08DV1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12BD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 974 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 621 gtggtacttcctgaacgtg 603
>emb|BX007384.1|CNS08DV0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12BD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 580 gtggtacttcctgaacgtg 598
>gb|AC025160.29| Homo sapiens 12 BAC RP11-526P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159691 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 ctttgtctccgtgatccat 96 ||||||||||||||||||| Sbjct: 65668 ctttgtctccgtgatccat 65686
>ref|XM_317608.2| Anopheles gambiae str. PEST ENSANGP00000009958 (ENSANGG00000007469), partial mRNA Length = 852 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 gtggtacttcctgaacgtg 27 ||||||||||||||||||| Sbjct: 609 gtggtacttcctgaacgtg 627
>emb|AL929132.9| Mouse DNA sequence from clone RP23-346G8 on chromosome 2, complete sequence Length = 129438 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 ctacccatactttgtctcc 87 ||||||||||||||||||| Sbjct: 4006 ctacccatactttgtctcc 3988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 882,668 Number of Sequences: 3902068 Number of extensions: 882668 Number of successful extensions: 47094 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46964 Number of HSP's gapped (non-prelim): 130 length of query: 124 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 103 effective length of database: 17,151,101,840 effective search space: 1766563489520 effective search space used: 1766563489520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)