ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal41j17 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 382 bits (982), Expect(2) = e-106 Identities = 189/203 (93%), Positives = 192/203 (94%) Frame = +3 Query: 36 TFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEEL 215 TFGIPIPEWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVT EKATSL IEEL Sbjct: 770 TFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLSSASVDDAAVIEEL 829 Query: 216 IAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 395 IAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA Sbjct: 830 IAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 889 Query: 396 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH 575 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH Sbjct: 890 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH 949 Query: 576 QELSWTVWDRWTVTGNITLRELL 644 QELSWTVWDRWTVTGNITLRELL Sbjct: 950 QELSWTVWDRWTVTGNITLRELL 972 Score = 22.3 bits (46), Expect(2) = e-106 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +2 Query: 2 FILAAAILRAVDF 40 FILAAAILRA F Sbjct: 759 FILAAAILRAETF 771
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 382 bits (981), Expect(2) = e-106 Identities = 189/203 (93%), Positives = 192/203 (94%) Frame = +3 Query: 36 TFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEEL 215 TFGIPI EWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVTDEKATSL IEEL Sbjct: 770 TFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEEL 829 Query: 216 IAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 395 IAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA Sbjct: 830 IAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 889 Query: 396 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH 575 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH Sbjct: 890 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH 949 Query: 576 QELSWTVWDRWTVTGNITLRELL 644 QELSWTVWDRWTVTGNITLRELL Sbjct: 950 QELSWTVWDRWTVTGNITLRELL 972 Score = 22.3 bits (46), Expect(2) = e-106 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +2 Query: 2 FILAAAILRAVDF 40 FILAAAILRA F Sbjct: 759 FILAAAILRAETF 771
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 305 bits (781), Expect = 8e-83 Identities = 148/203 (72%), Positives = 171/203 (84%) Frame = +3 Query: 36 TFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEEL 215 +FG+ IPEWAK +KL A+ V+++ VP F+PKQGV IVTDEKA++L IE+L Sbjct: 773 SFGVAIPEWAKDTSKL-ADVVNKIAVPTFEPKQGVNIVTDEKASNLSSTSVDDVAVIEDL 831 Query: 216 IAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 395 +AKL+E +K L GF M PIQFEKDDDTNFHMD+I+G ANMRARNYSIPEVDKLKAKFIA Sbjct: 832 LAKLQEYAKMLLPGFQMKPIQFEKDDDTNFHMDLISGLANMRARNYSIPEVDKLKAKFIA 891 Query: 396 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKH 575 GRIIPAIATSTAMATGLVCLELYK +AG H VEDYRNTFANLA+PLFS+AEPVPPK +KH Sbjct: 892 GRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLFSMAEPVPPKVMKH 951 Query: 576 QELSWTVWDRWTVTGNITLRELL 644 +E SWTVWDRW+V GN+TL ELL Sbjct: 952 KETSWTVWDRWSVQGNLTLAELL 974
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 165 bits (418), Expect = 9e-41 Identities = 90/198 (45%), Positives = 120/198 (60%), Gaps = 12/198 (6%) Frame = +3 Query: 87 AEAVDRVIVPDFQPKQGVKI-VTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPS--- 254 A + V VP+F PK GVKI V+D++ S ++LEE+ TLPS Sbjct: 788 ATFLQSVQVPEFTPKSGVKIHVSDQELQSANASVDD---------SRLEELKATLPSPDK 838 Query: 255 --GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATST 428 GF M PI FEKDDD+NFHMD I +N+RA NY IP D+ K+K IAG+IIPAIAT+T Sbjct: 839 LPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPSADRHKSKLIAGKIIPAIATTT 898 Query: 429 AMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 608 A GLVCLELYK + G +++ Y+N F NLA+P F +EP+ ++ WT+WDR+ Sbjct: 899 AAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958 Query: 609 TVTG------NITLRELL 644 V G +TL++ L Sbjct: 959 EVQGLQPNGEEMTLKQFL 976
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 164 bits (416), Expect = 2e-40 Identities = 90/198 (45%), Positives = 119/198 (60%), Gaps = 12/198 (6%) Frame = +3 Query: 87 AEAVDRVIVPDFQPKQGVKI-VTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPS--- 254 A + V VP+F PK GVKI V+D++ S ++LEE+ TLPS Sbjct: 788 ATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDD---------SRLEELKATLPSPDK 838 Query: 255 --GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATST 428 GF M PI FEKDDD+NFHMD I +N+RA NY IP D+ K+K IAG+IIPAIAT+T Sbjct: 839 LPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTT 898 Query: 429 AMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 608 A GLVCLELYK + G ++ Y+N F NLA+P F +EP+ ++ WT+WDR+ Sbjct: 899 AAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958 Query: 609 TVTG------NITLRELL 644 V G +TL++ L Sbjct: 959 EVQGLQPNGEEMTLKQFL 976
>UBE1Y_MOUSE (P31254) Ubiquitin-activating enzyme E1 Y (Fragment)| Length = 442 Score = 164 bits (415), Expect = 2e-40 Identities = 85/192 (44%), Positives = 116/192 (60%), Gaps = 6/192 (3%) Frame = +3 Query: 87 AEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHM 266 A+ + + VP F PK G++I E+ +EEL L K L GF M Sbjct: 171 AKLLQSLPVPKFAPKSGIRIHVSEQELQSTSATTIDDSHLEELKTALPTPDKLL--GFKM 228 Query: 267 NPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGL 446 PI FEKDDD+NFHMD I +N+RA NY I D+ K+K IAG+IIPAIAT+T+ GL Sbjct: 229 YPIDFEKDDDSNFHMDFIVAASNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGL 288 Query: 447 VCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTG-- 620 VCLELYK + G ++E Y+N+F NLA+PLFS + P+ P+ + + WT+WDR+ V G Sbjct: 289 VCLELYKVVQGHQQLESYKNSFINLALPLFSFSAPLAPECHQFYDQEWTLWDRFDVQGLQ 348 Query: 621 ----NITLRELL 644 +TL++ L Sbjct: 349 PSGEEMTLKQFL 360
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 162 bits (411), Expect = 6e-40 Identities = 89/198 (44%), Positives = 119/198 (60%), Gaps = 12/198 (6%) Frame = +3 Query: 87 AEAVDRVIVPDFQPKQGVKI-VTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPS--- 254 A + V VP+F PK GVKI V+D++ S ++LEE+ TLPS Sbjct: 788 ASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDD---------SRLEELKATLPSPDK 838 Query: 255 --GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATST 428 GF M PI FEKDDD+NFHMD I +N+RA NY I D+ K+K IAG+IIPAIAT+T Sbjct: 839 LPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTT 898 Query: 429 AMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 608 A GLVCLELYK + G +++ Y+N F NLA+P F +EP+ ++ WT+WDR+ Sbjct: 899 AAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958 Query: 609 TVTG------NITLRELL 644 V G +TL++ L Sbjct: 959 EVQGLQPNGEEMTLKQFL 976
>UBE1X_MOUSE (P31253) Ubiquitin-activating enzyme E1 X (Fragment)| Length = 450 Score = 162 bits (411), Expect = 6e-40 Identities = 89/198 (44%), Positives = 119/198 (60%), Gaps = 12/198 (6%) Frame = +3 Query: 87 AEAVDRVIVPDFQPKQGVKI-VTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPS--- 254 A + V VP+F PK GVKI V+D++ S ++LEE+ TLPS Sbjct: 174 ASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDD---------SRLEELKATLPSPDK 224 Query: 255 --GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATST 428 GF M PI FEKDDD+NFHMD I +N+RA NY I D+ K+K IAG+IIPAIAT+T Sbjct: 225 LPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTT 284 Query: 429 AMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 608 A GLVCLELYK + G +++ Y+N F NLA+P F +EP+ ++ WT+WDR+ Sbjct: 285 AAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 344 Query: 609 TVTG------NITLRELL 644 V G +TL++ L Sbjct: 345 EVQGVQPNGEEMTLKQFL 362
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 148 bits (374), Expect = 1e-35 Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 2/204 (0%) Frame = +3 Query: 39 FGIPIPEWAKTPNKLSAEAV-DRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEEL 215 +GI + PN ++V D +I+P+F P +KI ++ I++L Sbjct: 742 YGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQL 801 Query: 216 IAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIA 395 ++ L + S +GF + P+ FEKDDDTN H++ I +N RA+NY I D+ K KFIA Sbjct: 802 VSSLPDPSTL--AGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIA 859 Query: 396 GRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPV-PPKTIK 572 GRIIPAIAT+T++ TGLV LELYK + +E Y+N F NLA+P F +EP+ PK Sbjct: 860 GRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEY 919 Query: 573 HQELSWTVWDRWTVTGNITLRELL 644 + + +WDR+ + G+I L +L+ Sbjct: 920 NNKKYDKIWDRFDIKGDIKLSDLI 943
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 139 bits (350), Expect = 7e-33 Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 2/179 (1%) Frame = +3 Query: 114 PDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDD 293 P F PK G+KI +E + ++ + L S + GF + P +FEKDD Sbjct: 757 PPFAPKSGIKIQVNENEEAPETAANKDKQELKSIADSLPPPSSLV--GFRLTPAEFEKDD 814 Query: 294 DTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKAL 473 D+N H+D I +N+RA NY I D+ K KF+AG+I+PA+ TSTA+ +GLVCLEL K + Sbjct: 815 DSNHHIDFITAASNLRAMNYDITPADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLV 874 Query: 474 AGGHKVEDYRNTFANLAIPLFSIAEPV--PPKTIKHQELSWTVWDRWTVTGNITLRELL 644 G K+E+Y+N F NLAI LF+ ++P+ P + +E+ +WDR+ + + TL+EL+ Sbjct: 875 DGKKKIEEYKNGFFNLAIGLFTFSDPIASPKMKVNGKEID-KIWDRYNLP-DCTLQELI 931
>UBA1_CANAL (P52495) Ubiquitin-activating enzyme E1 1 (Fragment)| Length = 205 Score = 130 bits (326), Expect = 4e-30 Identities = 64/124 (51%), Positives = 84/124 (67%), Gaps = 1/124 (0%) Frame = +3 Query: 276 QFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL 455 +FEKDDDTN H++ I +N RA NY I D K KFIAG+IIPAIAT+TA+ TGLVCL Sbjct: 1 EFEKDDDTNHHIEFITAASNCRALNYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCL 60 Query: 456 ELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSW-TVWDRWTVTGNITL 632 ELYK + G +E Y+N F NLA+P +EP+ K+ + +WDR+ + G+ITL Sbjct: 61 ELYKVVDGKDDIEQYKNGFINLALPFIGFSEPIKSPEGKYNNKKFDQIWDRFELNGDITL 120 Query: 633 RELL 644 +ELL Sbjct: 121 QELL 124
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 103 bits (257), Expect = 4e-22 Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 3/132 (2%) Frame = +3 Query: 228 EEISKTLPS---GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAG 398 +E++K L G + P+ FEKDDD+NFH+D + A++R +NY IP V++ ++K I G Sbjct: 787 KELNKALEVWSVGPPLKPLMFEKDDDSNFHVDFVVAAASLRCQNYGIPPVNRAQSKRIVG 846 Query: 399 RIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQ 578 +IIPAIAT+TA GL+ LELYK ++G +R+++ +LA P P Sbjct: 847 QIIPAIATTTAAVAGLLGLELYKVVSGPRPRSAFRHSYLHLAENYLIRYMPFAPAIQTFH 906 Query: 579 ELSWTVWDRWTV 614 L WT WDR V Sbjct: 907 HLKWTSWDRLKV 918
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 53.5 bits (127), Expect = 5e-07 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 1/158 (0%) Frame = +3 Query: 48 PIP-EWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEELIAK 224 P+P +WA+ ++ A A + +P+ G+K D++ + IE L Sbjct: 279 PVPLDWAEVQSQGEANADQQN-----EPQLGLK---DQQVLDVKSYASLFSKSIETLRVH 330 Query: 225 LEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRI 404 L E + ++KDD MD + AN+R +S+ + K +AG I Sbjct: 331 LAEKGDGAE-------LIWDKDDPPA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNI 381 Query: 405 IPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 518 IPAIAT+ A+ GL+ LE K L+G K++ R F N Sbjct: 382 IPAIATTNAVIAGLIVLEGLKILSG--KIDQCRTIFLN 417
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/80 (38%), Positives = 46/80 (57%) Frame = +3 Query: 279 FEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 458 ++KDD + MD + AN+R +S+ + K +AG IIPAIAT+ A+ GL+ LE Sbjct: 344 WDKDDPSA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLE 401 Query: 459 LYKALAGGHKVEDYRNTFAN 518 K L+G K++ R F N Sbjct: 402 GLKILSG--KIDQCRTIFLN 419
>UBA2_YEAST (P52488) Ubiquitin-activating enzyme E1-like| (Polymerase-interacting protein 2) Length = 636 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +3 Query: 204 IEELIAKLEEISKTLPSGF--HMNPIQFEKDD-DTNFHMDVIAGFANMRARNYSIPEVDK 374 I+E I+ I++ L + N I+F+KDD DT ++ +A AN+R+ ++IP Sbjct: 303 IQEQISNFINITQKLMDRYPKEQNHIEFDKDDADT---LEFVATAANIRSHIFNIPMKSV 359 Query: 375 LKAKFIAGRIIPAIATSTAMATG 443 K IAG IIPAIAT+ A+ G Sbjct: 360 FDIKQIAGNIIPAIATTNAIVAG 382
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 38.9 bits (89), Expect = 0.013 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D H++ + A++RA Y+I VD+ + RIIPA+A++ A+ LE K Sbjct: 244 DADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALK 303 Query: 468 ALAGGHK-VEDYRN 506 K +++Y N Sbjct: 304 LATNIAKPIDNYLN 317
>LPXK_SILPO (Q5LMW7) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 333 Score = 35.4 bits (80), Expect = 0.15 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = +3 Query: 324 GFANMR-ARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDY 500 GF N A++ SI VD + F GR IPA +ATGL +L AL E + Sbjct: 145 GFQNPSVAKDLSIVVVDAAQG-FGNGRCIPAGPLREPVATGLARADLVLALGDAQAQEQF 203 Query: 501 RNTF-ANLAIPLFSIAEPVPPKT 566 R+T+ A L++PL + AE P +T Sbjct: 204 RDTWGAALSVPLVT-AELKPLRT 225
>AMOH_ARTGO (Q59118) Histamine oxidase (EC 1.4.3.6) (Copper amine oxidase)| Length = 683 Score = 33.1 bits (74), Expect = 0.72 Identities = 34/127 (26%), Positives = 42/127 (33%), Gaps = 25/127 (19%) Frame = +2 Query: 323 WFCQHEGKELQHSGS------GQAKGQVYSRQDHP------------SYRHLDCDGHWPR 448 W +H +EL +G G A Y QD H WP Sbjct: 561 WVTRHAEEELYAAGDFVNQHPGGAVLPAYVAQDRDIDGQDLVVWHSFGLTHFPRPEDWPI 620 Query: 449 VPRALQSPCWWTQGRRLPQHVCKPRDPTVL-------HC*TGSTQDHQAPGAVVDGLGPV 607 +P T G L H +PT+ HC TGS ++H APG G Sbjct: 621 MPVD-------TTGFTLKPHGFFDENPTLNVPSSAAGHCGTGSEREHAAPGGTAVGHSGP 673 Query: 608 DCNGQHH 628 D GQ H Sbjct: 674 DTGGQGH 680
>MANA_STRLI (P51529) Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)| (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) Length = 383 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = -2 Query: 599 PDRPRQLLVLDGLGWNR----FSNGEQWDREVCKRVAVVFDLVSTSKGFVKLEAHEASGH 432 PDR + + G N S+G +W + V+ + +K LE H+ +G+ Sbjct: 68 PDRTGSIADIAAKGANTVRVVLSSGGRWTKTSASEVSALIGQCKANKVICVLEVHDTTGY 127 Query: 431 RSRGGDSWDDPAGYKLGL 378 G S D Y +G+ Sbjct: 128 GKDGATSLDQAGDYWVGV 145
>UBA3_ARATH (O65041) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (RUB-activating enzyme) (Ubiquitin activating enzyme E1-like protein) Length = 454 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D HM + A RA + IP V + + IIPAIA++ A+ + LE K Sbjct: 246 DPDEPEHMKWVYDEAIRRAELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLK 305 Query: 468 ALAGGHK 488 ++ K Sbjct: 306 IVSACSK 312
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPE--VDKLKAKFIAGRIIPAIATSTAMATGLVCLEL 461 + D H+D + + RA + IP +++ + I RIIPA+A++ A+ C E Sbjct: 255 EPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRIIPAVASTNAIIAASCCNEA 314 Query: 462 YKAL 473 K L Sbjct: 315 LKIL 318
>MUTS_BACSK (Q5WFY3) DNA mismatch repair protein mutS| Length = 871 Score = 31.6 bits (70), Expect = 2.1 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Frame = +3 Query: 99 DRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXX-IEELIAKLEEISKTLPSGFHMNPI 275 +R I P+ + K+ + + DEK L +E +A L++++ + Sbjct: 489 ERYITPELKEKEALILEADEKLADLEYRLFADIRKQVEAYVASLQKLAADISE------- 541 Query: 276 QFEKDDDTNFHMDVIAGFANMRARN-YSIPEVDKLKAKFIAGRIIPAIAT 422 MDV+AGFA++ +N Y+ P + + + I G P + T Sbjct: 542 -----------MDVLAGFASVAEQNGYTKPTITESRDVAIKGGRHPVVET 580
>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL| antigen) Length = 806 Score = 31.6 bits (70), Expect = 2.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 354 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 268 C +PSC + LSHP +WC + T SG Sbjct: 45 CQPVPSCQKCILSHPSCAWCKQLNFTASG 73
>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)| Length = 1428 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 375 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 262 +CP PE CS +C + L P WC PS T G C Sbjct: 980 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1015
>ATRN_RAT (Q99J86) Attractin precursor (Zitter protein)| Length = 1432 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 375 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 262 +CP PE CS +C + L P WC PS T G C Sbjct: 984 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1019
>ITB7_HUMAN (P26010) Integrin beta-7 precursor| Length = 798 Score = 30.8 bits (68), Expect = 3.6 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 354 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 268 C PSC + LSHP +WC + T SG Sbjct: 45 CQPAPSCQKCILSHPSCAWCKQLNFTASG 73
>ATRN_HUMAN (O75882) Attractin precursor (Mahogany homolog) (DPPT-L)| Length = 1429 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 372 CPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 262 CP PE CS +C + L P WC PS T G C Sbjct: 982 CP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1016
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVVAAVCATEVFK 330
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSVERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSIERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 288 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 467 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,507,772 Number of Sequences: 219361 Number of extensions: 2257178 Number of successful extensions: 7315 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 6959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7302 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
