| Clone Name | baal41j16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence Length = 1732 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 62 agtgggaggacagggtagcccgaggcctattc 93 |||||||||||||| | ||||||||| ||||| Sbjct: 374 agtgggaggacaggatggcccgaggcttattc 405
>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence Length = 123565 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 actgagttcttcctcaattctctc 51 |||||||| ||||||||||||||| Sbjct: 79670 actgagtttttcctcaattctctc 79693
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7, complete sequence Length = 147943 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagctccctactgagttctt 38 |||||||||||||||||||| Sbjct: 60496 gagctccctactgagttctt 60515
>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence Length = 195159 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 92681 tcttcctcaatgctctcctcctc 92703
>ref|XM_979952.1| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1 (Camsap1l1), mRNA Length = 7688 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2004 tcttcctcaatgctctcctcctc 1982
>ref|XM_924051.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 12 (Camsap1l1), mRNA Length = 4439 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_924058.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 16 (Camsap1l1), mRNA Length = 7823 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2139 tcttcctcaatgctctcctcctc 2117
>ref|XM_924052.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 13 (Camsap1l1), mRNA Length = 7814 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_924054.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 15 (Camsap1l1), mRNA Length = 7799 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_924045.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 10 (Camsap1l1), mRNA Length = 7772 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_916022.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 9 (Camsap1l1), mRNA Length = 7805 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_899101.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 4 (Camsap1l1), mRNA Length = 4439 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_899121.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 8 (Camsap1l1), mRNA Length = 7823 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2139 tcttcctcaatgctctcctcctc 2117
>ref|XM_899106.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 5 (Camsap1l1), mRNA Length = 7814 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_899116.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 7 (Camsap1l1), mRNA Length = 7799 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_899089.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 2 (Camsap1l1), mRNA Length = 7772 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_129477.9| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 1 (Camsap1l1), mRNA Length = 7805 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>gb|AC137877.6| Mus musculus chromosome 10, clone RP23-72A1, complete sequence Length = 172812 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 ttcctcaattctctcctcc 55 ||||||||||||||||||| Sbjct: 139515 ttcctcaattctctcctcc 139497
>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete sequence Length = 185609 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 cacagtgggaggacagggt 77 ||||||||||||||||||| Sbjct: 112824 cacagtgggaggacagggt 112806
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 ttcctcaattctctcctcc 55 ||||||||||||||||||| Sbjct: 88413 ttcctcaattctctcctcc 88395
>dbj|AK137176.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530028C17 product:unclassifiable, full insert sequence Length = 4372 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 cacagtgggaggacagggt 77 ||||||||||||||||||| Sbjct: 2091 cacagtgggaggacagggt 2109
>dbj|AK028542.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632425I16 product:hypothetical Calponin-homology domain, CH-domain structure containing protein, full insert sequence Length = 4222 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tcttcctcaattctctcctcctc 57 ||||||||||| ||||||||||| Sbjct: 2089 tcttcctcaatgctctcctcctc 2067
>gb|AC087318.33| Homo sapiens 12 BAC RP11-73M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104647 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 gcacagtgggaggacaggg 76 ||||||||||||||||||| Sbjct: 52388 gcacagtgggaggacaggg 52370
>gb|AC004148.1|AC004148 Homo sapiens chromosome 17, clone HCIT524C5, complete sequence Length = 118276 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ctccctactgagttcttcc 40 ||||||||||||||||||| Sbjct: 93598 ctccctactgagttcttcc 93616
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 ttcttcctcaattctctcc 52 ||||||||||||||||||| Sbjct: 37318 ttcttcctcaattctctcc 37300
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 tcaattctctcctcctcgc 59 ||||||||||||||||||| Sbjct: 131905 tcaattctctcctcctcgc 131923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 906,494 Number of Sequences: 3902068 Number of extensions: 906494 Number of successful extensions: 62881 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62851 Number of HSP's gapped (non-prelim): 30 length of query: 138 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 117 effective length of database: 17,151,101,840 effective search space: 2006678915280 effective search space used: 2006678915280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)