ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41j04 |
|---|---|
| Clone Library Name | barley_pub |
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 127 bits (318), Expect = 4e-29 Identities = 90/275 (32%), Positives = 121/275 (44%), Gaps = 56/275 (20%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVS V++NAP +LNVDCD + NN + AMC ++ +VQ PQ+F Sbjct: 527 AGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRF 586 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP---------- 339 G K D + N+ V TGC RR+ +YG P Sbjct: 587 DGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAPKKKKTKRMTC 646 Query: 340 --------------------------------------DTVKHETRG------SPSYKEL 387 + ++ T+G SP +L Sbjct: 647 NCWPKWCLFCCGLRKNRKSKTTDKKKKNREASKQIHALENIEEGTKGTNDAAKSPEAAQL 706 Query: 388 QV--RFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWV 561 ++ +FG S V + S+ G LAR +S + A QV C YE T WGKEIGW+ Sbjct: 707 KLEKKFGQSPVFVASAGMENGG--LAR-NASPASLLREAIQVISCGYEDKTEWGKEIGWI 763 Query: 562 YGSMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 YGS+TEDILTG ++H+ GW+S PAF G A Sbjct: 764 YGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSA 798
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 125 bits (315), Expect = 9e-29 Identities = 86/272 (31%), Positives = 119/272 (43%), Gaps = 53/272 (19%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVSAV+TN P +LN+DCD + NN + AMC L+ + +VQ PQ+F Sbjct: 522 AGAMNALVRVSAVLTNGPFILNLDCDHYINNSKALREAMCFLMDPNLGKQVCYVQFPQRF 581 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKHE---- 357 G K+D + N+ V TGC R +YG PP VKH+ Sbjct: 582 DGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKVKHKKPSL 641 Query: 358 ---------TRGSPSYKELQVR--------------------------FGSSKVLIESSR 432 + S + KE + F K L+ S Sbjct: 642 LSKLCGGSRKKNSKAKKESDKKKSGRHTDSTVPVFNLDDIEEGVEGAGFDDEKALLMSQM 701 Query: 433 NI----------ISGDLLAR----PTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVYGS 570 ++ ++ L+ P+ + ++ A V C YE + WG EIGW+YGS Sbjct: 702 SLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGS 761 Query: 571 MTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 +TEDILTG ++HA GW+S PAF G A Sbjct: 762 VTEDILTGFKMHARGWRSIYCMPKLPAFKGSA 793
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 125 bits (313), Expect = 1e-28 Identities = 91/268 (33%), Positives = 116/268 (43%), Gaps = 49/268 (18%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGA N L RVSAV+TNAP +LN+DCD + NN + AMC L+ FVQ PQ+F Sbjct: 447 AGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGQDVCFVQFPQRF 506 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKHETRGS 369 G K D + N+ V TG RR+ +YG PP + + S Sbjct: 507 DGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGTGTVFRRQALYGYSPPSKPRILPQSS 566 Query: 370 PS-----------------YKE--------------------------------LQVRFG 402 S YK+ + FG Sbjct: 567 SSSCCCLTKKKQPQDPSEIYKDAKREELDAAIFNLGDLDNYDEYDRSMLISQTSFEKTFG 626 Query: 403 SSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVYGSMTED 582 S V IES+ G +V+ S+ I+ A V C YE T WGKEIGW+YGS+TED Sbjct: 627 LSTVFIESTLMENGG---VPDSVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITED 683 Query: 583 ILTGQRIHAAGWKSALLDTNPPAFLGCA 666 ILTG ++H GW+S PAF G A Sbjct: 684 ILTGFKMHCRGWRSIYCMPLRPAFKGSA 711
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 124 bits (311), Expect = 3e-28 Identities = 89/275 (32%), Positives = 117/275 (42%), Gaps = 56/275 (20%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVSAV++NAP +LNVDCD + NN + AMC ++ +VQ PQ+F Sbjct: 545 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKICYVQFPQRF 604 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGM-------PPPDT- 345 G + D + N+ V TGC RR+ +YG PP T Sbjct: 605 DGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAPKKKQPPGRTC 664 Query: 346 --------------------VKHETRGSPSYKELQV------------------------ 393 VK R P Q+ Sbjct: 665 NCWPKWCCLCCGMRKKKTGKVKDNQRKKPKETSKQIHALEHIEEGLQVTNAENNSETAQL 724 Query: 394 ----RFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWV 561 +FG S VL+ S+ + G V+ +S + + QV C YE T WGKEIGW+ Sbjct: 725 KLEKKFGQSPVLVASTLLLNGG---VPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWI 781 Query: 562 YGSMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 YGS+TEDILTG ++H GW+S AF G A Sbjct: 782 YGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSA 816
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 123 bits (309), Expect = 4e-28 Identities = 82/257 (31%), Positives = 111/257 (43%), Gaps = 38/257 (14%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RV+ V+TNAP MLN+DCD + NN + AMC L+ +VQ PQ+F Sbjct: 501 AGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRF 560 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKHETR-- 363 G +D + N+ V TGC +R+ +YG PP K Sbjct: 561 DGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMIS 620 Query: 364 -----------------------------GSPSYKE-------LQVRFGSSKVLIESSRN 435 G+ KE + FG S + + S+ Sbjct: 621 CGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTSTLM 680 Query: 436 IISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVYGSMTEDILTGQRIHAAG 615 G P+ + ++ A V C YE T WG E+GW+YGS+TEDILTG ++H G Sbjct: 681 EEGG---VPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRG 737 Query: 616 WKSALLDTNPPAFLGCA 666 W+S PAF G A Sbjct: 738 WRSIYCMPKRPAFKGSA 754
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 120 bits (301), Expect = 4e-27 Identities = 89/274 (32%), Positives = 118/274 (43%), Gaps = 55/274 (20%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVSAV+TN +LNVDCD + NN + AMC ++ +VQ PQ+F Sbjct: 525 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQRF 584 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPP--------PDT 345 G D + N+ V TGC R+ +YG P P+ Sbjct: 585 DGIDLHDRYANRNTVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNI 644 Query: 346 V---------KHETRGSPSY--------------------------------------KE 384 + K ++R P+Y K Sbjct: 645 IVKSCFGSRKKGKSRKIPNYEDNRSIKRSDSNVPLFNMEDIDEDVEGYEDEMSLLVSQKR 704 Query: 385 LQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVY 564 L+ RFG S V I ++ G T + + ++ A V C YEA T WGKEIGW+Y Sbjct: 705 LEKRFGQSPVFIAATFMEQGG---LPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIY 761 Query: 565 GSMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 GS+TEDILTG ++HA GW S + PAF G A Sbjct: 762 GSVTEDILTGFKMHARGWISIYCVPSRPAFKGSA 795
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 115 bits (288), Expect = 1e-25 Identities = 85/275 (30%), Positives = 114/275 (41%), Gaps = 56/275 (20%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVS V++NAP +LNVDCD + NN + AMC ++ +VQ PQ+F Sbjct: 539 AGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRF 598 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKHETRGS 369 G + D + N+ V TGC RR+ +YG P K + Sbjct: 599 DGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAPKKKKGPRKTC 658 Query: 370 PSY-KELQVRFGSSK-------------------VLIESSRNIISGDLLARPTVDVSSR- 486 + K + FGS K I + NI G + V+ S+ Sbjct: 659 NCWPKWCLLCFGSRKNRKAKTVAADKKKKNREASKQIHALENIEEGRVTKGSNVEQSTEA 718 Query: 487 -----------------------------------IEMAKQVGDCNYEAGTCWGKEIGWV 561 ++ A QV C YE T WGKEIGW+ Sbjct: 719 MQMKLEKKFGQSPVFVASARMENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWI 778 Query: 562 YGSMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 YGS+TEDILTG ++H+ GW+S AF G A Sbjct: 779 YGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSA 813
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 114 bits (286), Expect = 2e-25 Identities = 80/273 (29%), Positives = 109/273 (39%), Gaps = 54/273 (19%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVSAV++NAP +LNVDCD + NN + +MC ++ +VQ PQ+F Sbjct: 540 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQSGKKVCYVQFPQRF 599 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKH----- 354 G + D + N+ V TGC RR+ +YG P K Sbjct: 600 DGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAPKKKKPPGKTC 659 Query: 355 -------------ETRGSPSYKELQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEM 495 + K+ + + I + N+ G ++ V+ S Sbjct: 660 NCWPKWCCLCCGLRKKSKTKAKDKKTNTKETSKQIHALENVDEGVIVPVSNVEKRSEATQ 719 Query: 496 AK------------------------------------QVGDCNYEAGTCWGKEIGWVYG 567 K QV C YE T WGKEIGW+YG Sbjct: 720 LKLEKKFGQSPVFVASAVLQNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYG 779 Query: 568 SMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 S+TEDILTG ++H GW+S AF G A Sbjct: 780 SVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSA 812
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 112 bits (281), Expect = 8e-25 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 52/271 (19%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN L RVSAV+TN +LNVDCD + NN + AMC ++ +VQ PQ+F Sbjct: 538 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQRF 597 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPP--------PDT 345 G D + N+ V TGC R+ +YG P P+ Sbjct: 598 DGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNI 657 Query: 346 V-------KHETRGSPSYKELQVR-----------------------FGSSKVLIESSRN 435 + + + + S Y + R + + ++ S R+ Sbjct: 658 IVKSCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDDERSILMSQRS 717 Query: 436 I----------ISGDLLAR----PTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVYGSM 573 + I+ + + PT + ++ ++ A V C YE T WGKEIGW+YGS+ Sbjct: 718 VEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSV 777 Query: 574 TEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 TEDILTG ++HA GW S + PAF G A Sbjct: 778 TEDILTGFKMHARGWISIYCNPPRPAFKGSA 808
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 83.6 bits (205), Expect = 5e-16 Identities = 48/98 (48%), Positives = 57/98 (58%) Frame = +1 Query: 373 SYKELQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEI 552 S K + RFG S V I S+ ++ L T + SS I+ A V C YE T WGKEI Sbjct: 682 SQKNFEKRFGMSPVFIAST--LMENGGLPEAT-NTSSLIKEAIHVISCGYEEKTEWGKEI 738 Query: 553 GWVYGSMTEDILTGQRIHAAGWKSALLDTNPPAFLGCA 666 GW+YGS+TEDILTG R+H GWKS PAF G A Sbjct: 739 GWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSA 776 Score = 76.3 bits (186), Expect = 8e-14 Identities = 43/116 (37%), Positives = 58/116 (50%) Frame = +1 Query: 10 AGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIHSGFVQVPQKF 189 AGAMN + RVSAV+TNAP MLN+DCD + NN + +MC L+ +VQ PQ+F Sbjct: 478 AGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRF 537 Query: 190 YGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPPDTVKHE 357 G +D + N+ V TGC R +YG PP + K + Sbjct: 538 DGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRK 593
>FTZF1_DROME (P33244) Nuclear hormone receptor FTZ-F1 (FTZ-F1 alpha)| Length = 1027 Score = 31.2 bits (69), Expect = 2.9 Identities = 26/102 (25%), Positives = 41/102 (40%) Frame = +2 Query: 92 SPTIRRSPYTRCASYWGSTTRSTAGSSKCHRSSTVASRTIPLATRCRL*PRKLEVESPGS 271 S T P + AS GS + S +GS R+ A+ T + P + + S Sbjct: 276 STTTTTGPGSGSAS--GSGSGSGSGSGSIARTIGTATPTTTTSMSNTANPTRSSLHSIEE 333 Query: 272 KACSTAARAVFTAGKSFTACRHLTPSNTRQEVHHLTRSCKSG 397 A S+ A + + T+ TP +Q+ HH+ SG Sbjct: 334 LAASSCAPRAASPNSNHTSSASTTPQQQQQQQHHMQSGNHSG 375
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Frame = +1 Query: 472 DVSSRIEMAKQVGDCNYE----AGTCWGKEIGWVYGSMTEDILTGQRIHA--AGWKSALL 633 D+ + + AK G + G CWG I W+Y + + G + G SAL+ Sbjct: 145 DLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALM 204 Query: 634 DTNP 645 NP Sbjct: 205 PKNP 208
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 29.6 bits (65), Expect = 8.5 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 1/111 (0%) Frame = -3 Query: 601 SVVRSKCLLSLIH-RPNQSPCPNTCQPHSCNRRLVLPFRCDSIHQRLV*RAGLLR*CS*M 425 S V S C ++ P QS C ++C P C + P C S + +A + C Sbjct: 180 SCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQ---QACCVPVCCKT 236 Query: 424 IRSTPLSSQT*LAAPCKMVNLLSRV*RCQVAACRK*LSCGENSPCRRRTCL 272 + P+ S+ ++ C CQ ++C+ +C +SPC++ C+ Sbjct: 237 VCCKPVCSED--SSSC-----------CQQSSCQP--ACCTSSPCQQACCV 272
>MYC_RAT (P09416) Myc proto-oncogene protein (c-Myc) (Transcription factor| p64) Length = 439 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -3 Query: 655 RMPVGWCPTRPISNPPHGSVVRSKCLLSLIHRPNQSPCPNTCQPHSCNRRLVL 497 R G P+R S PPH +V +C +S H+ N + P+T + + +R L Sbjct: 276 RSESGSSPSRGHSKPPHSPLVLKRCHVS-THQHNYAAPPSTRKDYPAAKRAKL 327
>MYC_MOUSE (P01108) Myc proto-oncogene protein (c-Myc) (Transcription factor| p64) Length = 439 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -3 Query: 655 RMPVGWCPTRPISNPPHGSVVRSKCLLSLIHRPNQSPCPNTCQPHSCNRRLVL 497 R G P+R S PPH +V +C +S H+ N + P+T + + +R L Sbjct: 276 RSESGSSPSRGHSKPPHSPLVLKRCHVS-THQHNYAAPPSTRKDYPAAKRAKL 327 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 115,564,470 Number of Sequences: 219361 Number of extensions: 2766754 Number of successful extensions: 7892 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 7444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7870 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
