ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal41i12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCRL2_ORYSA (Q5QNA6) SCAR-like protein 2 82 3e-16
2SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Pr... 60 1e-09
3SCRL1_ORYSA (Q84TX2) SCAR-like protein 1 60 2e-09
4SCAR4_ARATH (Q5XPJ6) Protein SCAR4 (AtSCAR4) (Protein WAVE3) 57 1e-08
5SCAR3_ARATH (Q9LP46) Protein SCAR3 (AtSCAR3) (Protein WAVE2) 54 9e-08
6SCAR1_ARATH (Q6AWX6) Protein SCAR1 (AtSCAR1) (Protein WAVE1) 52 5e-07
7SCARL_ARATH (Q5XPK0) Scar-like domain-containing protein 52 6e-07
8WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem... 33 0.17
9WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem... 31 0.84
10WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem... 31 1.1
11STX1_CAEEL (Q20024) Putative syntaxin-1 28 7.1

>SCRL2_ORYSA (Q5QNA6) SCAR-like protein 2|
          Length = 1334

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEAA 128
           LRQLGDLAEFAAD+FHDLHEQVITTS+RGRKVLTRVQNIEAA
Sbjct: 63  LRQLGDLAEFAADVFHDLHEQVITTSARGRKVLTRVQNIEAA 104



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>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein|
           DISTORTED3) (Protein IRREGULAR TRICHOME BRANCH1)
          Length = 1399

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEA 125
           LRQLGDLAEFAA++FHDLHE+V+ T+SR   ++ RVQ +EA
Sbjct: 44  LRQLGDLAEFAAEMFHDLHEEVMATASRSHGLMARVQQLEA 84



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>SCRL1_ORYSA (Q84TX2) SCAR-like protein 1|
          Length = 2097

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEA 125
           LRQLGDLAEFAA+IFHDLHE V+ T+SRG  ++ R++ +EA
Sbjct: 42  LRQLGDLAEFAAEIFHDLHEDVMATASRGHGLMLRLRQLEA 82



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>SCAR4_ARATH (Q5XPJ6) Protein SCAR4 (AtSCAR4) (Protein WAVE3)|
          Length = 1170

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEA 125
           LRQLGDL+EFAA++FH LHEQ++TT++RG  +  R+Q++EA
Sbjct: 44  LRQLGDLSEFAAEVFHCLHEQLMTTAARGHGLAMRLQHLEA 84



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>SCAR3_ARATH (Q9LP46) Protein SCAR3 (AtSCAR3) (Protein WAVE2)|
          Length = 1020

 Score = 54.3 bits (129), Expect = 9e-08
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEA 125
           LRQLGDLAEFAA+IFH + E+V+ T+SR  ++  R+Q+IEA
Sbjct: 38  LRQLGDLAEFAAEIFHGIQEEVMATASRSNQLKIRLQHIEA 78



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>SCAR1_ARATH (Q6AWX6) Protein SCAR1 (AtSCAR1) (Protein WAVE1)|
          Length = 821

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEA 125
           LRQLGDL EFAA+IFH + E+V+ T+SR  K+  R++ IEA
Sbjct: 44  LRQLGDLTEFAAEIFHGIQEEVMITASRSNKLKMRLKQIEA 84



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>SCARL_ARATH (Q5XPK0) Scar-like domain-containing protein|
          Length = 2028

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 24/42 (57%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIEAA 128
           LRQLGDLAEF+A++F+ L E+V  T+SR +K+ +RV+ IE+A
Sbjct: 46  LRQLGDLAEFSAEVFNGLQEEVTVTASRCQKLTSRVRRIESA 87



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>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIE 122
           +RQLG L+++A DIF +L  Q  T +SR   +  RV  ++
Sbjct: 37  IRQLGSLSKYAEDIFGELFTQANTFASRVSSLAERVDRLQ 76



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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIE 122
           +RQLG L+++A DIF ++  Q    +SR   +  RV  ++
Sbjct: 37  IRQLGSLSKYAEDIFGEICTQASAFASRVNSLAERVDRVQ 76



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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 3   LRQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQNIE 122
           +RQLG L+++A DIF +L  Q  T +S    +  RV  ++
Sbjct: 165 IRQLGSLSKYAEDIFGELFTQANTFASPVSSLAERVDGLQ 204



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>STX1_CAEEL (Q20024) Putative syntaxin-1|
          Length = 306

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 6   RQLGDLAEFAADIFHDLHEQVITTSSRGRKVLTRVQN 116
           RQ+G+LA+    +FHDLH  V++       ++  V+N
Sbjct: 219 RQMGELAQ----MFHDLHIMVVSQGEMVDSIVNSVEN 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,656,855
Number of Sequences: 219361
Number of extensions: 146266
Number of successful extensions: 361
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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