ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41i11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106906.1| Zea mays PCO076960 mRNA sequence Length = 1157 Score = 315 bits (159), Expect = 9e-83 Identities = 340/401 (84%), Gaps = 6/401 (1%) Strand = Plus / Plus Query: 171 ctcgccggccttgactcctcccactccgatctctgcttcgccgtcgcagccaggctcgag 230 ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 181 ctcgccgacctcgactcctcccactccgatctctgcttcgccgtcgcctccaggctcgag 240 Query: 231 aagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccgacgccggtgcg 290 |||||||| | ||| || ||||||||||| |||||||||||||||||||||||||| | | Sbjct: 241 aagctctacgccggtcgatgcttcgtcggtctccgcatccccgaccccgacgccggcgag 300 Query: 291 cgccagcatgtcgacgtcgttctcgtcaccaagagggaggtcatggtggtgctaatcaac 350 ||||||||| ||||||| || ||||| |||||||||||||| |||||||| ||||| Sbjct: 301 cgccagcatatcgacgttgtcctcgttaccaagagggaggtgatggtggtagcgatcaaa 360 Query: 351 aatctctctggttttgttgaggttgacaangatggtaactggt------acaccgaaaag 404 || | |||||||||||||||| |||||| ||||| || |||| ||| || ||| Sbjct: 361 aacttatctggttttgttgaggctgacaaggatggaaattggtcttgtcccactgacaag 420 Query: 405 aagcacaagcaggaggttattcctaacccggtactagaagtcagtaggatagctgccaat 464 ||||| ||||| ||| | |||| ||||||||| ||||||||| || ||||||| ||| Sbjct: 421 aagcataagcatgagatatttccaaacccggtattagaagtcaacagactagctgctaat 480 Query: 465 cttcaatcatacttggagcagaggggagcaacactgcctaatgggattgtaaacggaaga 524 |||||||||||||||||||| |||||||||| ||||||| ||||| | | | ||| ||| Sbjct: 481 cttcaatcatacttggagcaaaggggagcaaaactgcctgatgggcatatcatcgggaga 540 Query: 525 gttgtactgccaaatcccaactgcaggccttcgtacactat 565 ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 541 gttgttctgccaaatcccaactgcaggccttcctatactat 581 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatcc 135 |||||||| || || |||||||||||||||| ||||||| |||||| Sbjct: 97 atgtgggtggaaatcctgtgcggcctggtggtctacaagatcatcc 142
>ref|NM_197887.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0027L23.9), mRNA Length = 1297 Score = 301 bits (152), Expect = 1e-78 Identities = 439/533 (82%), Gaps = 9/533 (1%) Strand = Plus / Plus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 140 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 199 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 200 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 259 Query: 207 ttcgccgtcgcagccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgc 266 |||||| |||| ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 260 ttcgccctcgcctccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgc 319 Query: 267 atccccgaccccgacgccggtgcgcgccagcatgtcgacgtcgttctcgtcaccaagagg 326 |||||||||||||||||||| | |||||||||||||||| |||| ||| | ||||| ||| Sbjct: 320 atccccgaccccgacgccggcgagcgccagcatgtcgacctcgtcctccttaccaacagg 379 Query: 327 gaggtcatggtggtgctaatcaacaatctctctggttttgttgaggttgacaangatggt 386 ||||||||||| ||| ||| |||| | ||||||||||||||||| || || ||||| Sbjct: 380 gaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggatggc 439 Query: 387 aactgg---tacacc---gaaaagaagcacaagcaggaggttattcctaacccggtacta 440 |||||| | | || || |||||| ||||||| | ||||| || ||||||||||| Sbjct: 440 aactggacttgccccagtgataagaagaacaagcatggtgttatcccaaacccggtactg 499 Query: 441 gaagtcagtaggatagctgccaatcttcaatcatacttggagcagaggggagcaacactg 500 |||||| ||| | ||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct: 500 caagtcaatagactggctgccaatcttcaatcgtacttggagaagaggggagcaaaactg 559 Query: 501 cctaatgggattgtaaacggaagagttgtactgccaaatcccaactgcaggccttcgtac 560 ||| |||| | ||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 560 cctgatggtcatataactggaaagattgtactgccaaatcccaactgcaggccttcctat 619 Query: 561 actattaatcttcaaccggaggttatctcgtatgatcaatggaaagatattaa 613 | || | ||||||||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 620 gccatcactcttcaaccagaagttatcttgtacgatcaatggaaagatcttaa 672
>dbj|AK070910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M03, full insert sequence Length = 1284 Score = 301 bits (152), Expect = 1e-78 Identities = 439/533 (82%), Gaps = 9/533 (1%) Strand = Plus / Plus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 127 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 186 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 187 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 246 Query: 207 ttcgccgtcgcagccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgc 266 |||||| |||| ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 247 ttcgccctcgcctccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgc 306 Query: 267 atccccgaccccgacgccggtgcgcgccagcatgtcgacgtcgttctcgtcaccaagagg 326 |||||||||||||||||||| | |||||||||||||||| |||| ||| | ||||| ||| Sbjct: 307 atccccgaccccgacgccggcgagcgccagcatgtcgacctcgtcctccttaccaacagg 366 Query: 327 gaggtcatggtggtgctaatcaacaatctctctggttttgttgaggttgacaangatggt 386 ||||||||||| ||| ||| |||| | ||||||||||||||||| || || ||||| Sbjct: 367 gaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggatggc 426 Query: 387 aactgg---tacacc---gaaaagaagcacaagcaggaggttattcctaacccggtacta 440 |||||| | | || || |||||| ||||||| | ||||| || ||||||||||| Sbjct: 427 aactggacttgccccagtgataagaagaacaagcatggtgttatcccaaacccggtactg 486 Query: 441 gaagtcagtaggatagctgccaatcttcaatcatacttggagcagaggggagcaacactg 500 |||||| ||| | ||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct: 487 caagtcaatagactggctgccaatcttcaatcgtacttggagaagaggggagcaaaactg 546 Query: 501 cctaatgggattgtaaacggaagagttgtactgccaaatcccaactgcaggccttcgtac 560 ||| |||| | ||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 547 cctgatggtcatataactggaaagattgtactgccaaatcccaactgcaggccttcctat 606 Query: 561 actattaatcttcaaccggaggttatctcgtatgatcaatggaaagatattaa 613 | || | ||||||||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 607 gccatcactcttcaaccagaagttatcttgtacgatcaatggaaagatcttaa 659
>dbj|AK059043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D06, full insert sequence Length = 1364 Score = 248 bits (125), Expect = 2e-62 Identities = 332/400 (83%), Gaps = 6/400 (1%) Strand = Plus / Plus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 337 ccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccg 396 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgttctcgtcaccaagagggaggtcatggtgg 339 ||||||| | |||||||||||||||| |||| ||| | ||||| |||||||||||||| | Sbjct: 397 acgccggcgagcgccagcatgtcgacctcgtcctccttaccaacagggaggtcatggtag 456 Query: 340 tgctaatcaacaatctctctggttttgttgaggttgacaangatggtaactgg---taca 396 || ||| |||| | ||||||||||||||||| || || ||||| |||||| | | Sbjct: 457 tggctatccacaacatttctggttttgttgaggtcgataaggatggcaactggacttgcc 516 Query: 397 cc---gaaaagaagcacaagcaggaggttattcctaacccggtactagaagtcagtagga 453 || || |||||| ||||||| | ||||| || ||||||||||| |||||| ||| Sbjct: 517 ccagtgataagaagaacaagcatggtgttatcccaaacccggtactgcaagtcaatagac 576 Query: 454 tagctgccaatcttcaatcatacttggagcagaggggagcaacactgcctaatgggattg 513 | ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| | Sbjct: 577 tggctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcata 636 Query: 514 taaacggaagagttgtactgccaaatcccaactgcaggccttcgtacactattaatcttc 573 ||| |||| ||||||||||||||||||||||||||||||| || | || | ||||| Sbjct: 637 taactggaaagattgtactgccaaatcccaactgcaggccttcctatgccatcactcttc 696 Query: 574 aaccggaggttatctcgtatgatcaatggaaagatattaa 613 |||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 697 aaccagaagttatcttgtacgatcaatggaaagatcttaa 736 Score = 65.9 bits (33), Expect = 1e-07 Identities = 107/131 (81%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 136 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 195 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 196 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 255 Query: 207 ttcgccgtcgc 217 |||||| |||| Sbjct: 256 ttcgccctcgc 266
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 121583 ccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccg 121524 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||||||| |||| Sbjct: 121523 acgccggcgagcgccagcatgtcgacctcgt 121493 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 456 gctgccaatcttcaatcatacttggagcagaggggagcaacactgcctaatgggattgta 515 ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| | || Sbjct: 120364 gctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcatata 120305 Query: 516 aacggaagagttgtactgccaaatcccaactgcagg 551 | |||| |||||||||||||||||||||||||| Sbjct: 120304 actggaaagattgtactgccaaatcccaactgcagg 120269 Score = 65.9 bits (33), Expect = 1e-07 Identities = 107/131 (81%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 121784 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 121725 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 121724 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 121665 Query: 207 ttcgccgtcgc 217 |||||| |||| Sbjct: 121664 ttcgccctcgc 121654 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 569 tcttcaaccggaggttatctcgtatgatcaatggaaagatattaa 613 ||||||||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 120134 tcttcaaccagaagttatcttgtacgatcaatggaaagatcttaa 120090 Score = 44.1 bits (22), Expect = 0.54 Identities = 57/69 (82%) Strand = Plus / Minus Query: 324 agggaggtcatggtggtgctaatcaacaatctctctggttttgttgaggttgacaangat 383 |||||||||||||| ||| ||| |||| | ||||||||||||||||| || || ||| Sbjct: 121189 agggaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggat 121130 Query: 384 ggtaactgg 392 || |||||| Sbjct: 121129 ggcaactgg 121121
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 22469160 ccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccg 22469101 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||||||| |||| Sbjct: 22469100 acgccggcgagcgccagcatgtcgacctcgt 22469070 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 456 gctgccaatcttcaatcatacttggagcagaggggagcaacactgcctaatgggattgta 515 ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| | || Sbjct: 22467941 gctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcatata 22467882 Query: 516 aacggaagagttgtactgccaaatcccaactgcagg 551 | |||| |||||||||||||||||||||||||| Sbjct: 22467881 actggaaagattgtactgccaaatcccaactgcagg 22467846 Score = 65.9 bits (33), Expect = 1e-07 Identities = 107/131 (81%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 22469361 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 22469302 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 22469301 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 22469242 Query: 207 ttcgccgtcgc 217 |||||| |||| Sbjct: 22469241 ttcgccctcgc 22469231 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 569 tcttcaaccggaggttatctcgtatgatcaatggaaagatattaa 613 ||||||||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 22467711 tcttcaaccagaagttatcttgtacgatcaatggaaagatcttaa 22467667 Score = 44.1 bits (22), Expect = 0.54 Identities = 57/69 (82%) Strand = Plus / Minus Query: 324 agggaggtcatggtggtgctaatcaacaatctctctggttttgttgaggttgacaangat 383 |||||||||||||| ||| ||| |||| | ||||||||||||||||| || || ||| Sbjct: 22468766 agggaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggat 22468707 Query: 384 ggtaactgg 392 || |||||| Sbjct: 22468706 ggcaactgg 22468698
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 22481628 ccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccg 22481569 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||||||| |||| Sbjct: 22481568 acgccggcgagcgccagcatgtcgacctcgt 22481538 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 456 gctgccaatcttcaatcatacttggagcagaggggagcaacactgcctaatgggattgta 515 ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| | || Sbjct: 22480409 gctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcatata 22480350 Query: 516 aacggaagagttgtactgccaaatcccaactgcagg 551 | |||| |||||||||||||||||||||||||| Sbjct: 22480349 actggaaagattgtactgccaaatcccaactgcagg 22480314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 107/131 (81%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 90 atgtgggtcgagatactgtgcggcctggtggcctacaagctcatccgcgccgtcttcttc 149 |||||||| ||||| |||||||| ||| |||| |||||| |||||||| |||||||||| Sbjct: 22481829 atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttc 22481770 Query: 150 tccgac---gacggcctggaccagctcgccggccttgactcctcccactccgatctctgc 206 ||||| |||| || | || ||||||| ||| || ||| |||||||||| |||||| Sbjct: 22481769 gccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgc 22481710 Query: 207 ttcgccgtcgc 217 |||||| |||| Sbjct: 22481709 ttcgccctcgc 22481699 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 569 tcttcaaccggaggttatctcgtatgatcaatggaaagatattaa 613 ||||||||| || ||||||| ||| ||||||||||||||| |||| Sbjct: 22480179 tcttcaaccagaagttatcttgtacgatcaatggaaagatcttaa 22480135 Score = 44.1 bits (22), Expect = 0.54 Identities = 57/69 (82%) Strand = Plus / Minus Query: 324 agggaggtcatggtggtgctaatcaacaatctctctggttttgttgaggttgacaangat 383 |||||||||||||| ||| ||| |||| | ||||||||||||||||| || || ||| Sbjct: 22481234 agggaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggat 22481175 Query: 384 ggtaactgg 392 || |||||| Sbjct: 22481174 ggcaactgg 22481166
>ref|NM_189446.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 101 bits (51), Expect = 3e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1076 ccaggatcgagaagctctactccggccgctgcttcgtcggcctccgcatccccga-cccg 1018 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||| ||| |||| Sbjct: 1017 acgccggcgagcgccagcatgttgacctcgt 987
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 3e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 42786501 ccaggatcgagaagctctactccggccgctgcttcgtcggcctccgcatccccga-cccg 42786559 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||| ||| |||| Sbjct: 42786560 acgccggcgagcgccagcatgttgacctcgt 42786590 Score = 44.1 bits (22), Expect = 0.54 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgccccttccctcctc 51 ||||||||||||||||||||| || ||||||||| Sbjct: 21888955 caccaccgcctcctccaccgctcc-tccctcctc 21888987 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 gcgccgtcttcttctccgacga 157 |||||||||||||||||||||| Sbjct: 1374861 gcgccgtcttcttctccgacga 1374840
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 101 bits (51), Expect = 3e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 220 ccaggctcgagaagctctatggcggccgctgcttcgtcggcctccgcatccccgaccccg 279 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 119266 ccaggatcgagaagctctactccggccgctgcttcgtcggcctccgcatccccga-cccg 119324 Query: 280 acgccggtgcgcgccagcatgtcgacgtcgt 310 ||||||| | |||||||||||| ||| |||| Sbjct: 119325 acgccggcgagcgccagcatgttgacctcgt 119355
>gb|AC121781.3| Mus musculus BAC clone RP23-363D24 from chromosome X, complete sequence Length = 174187 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 410 caagcaggaggttattcctaacc 432 ||||||||||||||||||||||| Sbjct: 170556 caagcaggaggttattcctaacc 170534
>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence Length = 161458 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 410 caagcaggaggttattcctaacc 432 ||||||||||||||||||||||| Sbjct: 20201 caagcaggaggttattcctaacc 20179
>ref|NM_105919.2| Arabidopsis thaliana unknown protein AT1G72600 mRNA, complete cds Length = 555 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 263 caccaccgcctcctccaccgcc 284
>ref|XM_549985.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1254 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 gcgccgtcttcttctccgacga 157 |||||||||||||||||||||| Sbjct: 554 gcgccgtcttcttctccgacga 533
>gb|BT011782.1| Arabidopsis thaliana At1g72600 mRNA, complete cds Length = 408 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 116 caccaccgcctcctccaccgcc 137
>gb|BT010658.1| Arabidopsis thaliana At1g72600 mRNA, complete cds Length = 582 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 254 caccaccgcctcctccaccgcc 275
>gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166857 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 45961 caccaccgcctcctccaccgcc 45940
>gb|AC010709.4| Drosophila melanogaster 3L BAC RPCI98-18D24 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 166520 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 19079 caccaccgcctcctccaccgcc 19100
>ref|NM_168294.1| Drosophila melanogaster CG32030-RB, transcript variant B (CG32030), mRNA Length = 4346 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 2291 caccaccgcctcctccaccgcc 2312
>ref|NM_168293.1| Drosophila melanogaster CG32030-RA, transcript variant A (CG32030), mRNA Length = 5031 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 2291 caccaccgcctcctccaccgcc 2312
>gb|AY084212.1| Drosophila melanogaster SD08909 full insert cDNA Length = 4709 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 1958 caccaccgcctcctccaccgcc 1979
>gb|AY075386.1| Drosophila melanogaster LD24110 full length cDNA Length = 4325 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 2259 caccaccgcctcctccaccgcc 2280
>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete sequence Length = 101105 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 72130 caccaccgcctcctccaccgcc 72109
>emb|BX816560.1|CNS0ABKX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1838 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 239 caccaccgcctcctccaccgcc 260
>gb|AC012456.10| Homo sapiens BAC clone RP11-484O9 from 2, complete sequence Length = 174157 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 gaagcaccaccgcctcctccaccgcc 39 |||||||||||||| ||||||||||| Sbjct: 39719 gaagcaccaccgccgcctccaccgcc 39694
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 44.1 bits (22), Expect = 0.54 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgccccttccctcctc 51 ||||||||||||||||||||| || ||||||||| Sbjct: 118248 caccaccgcctcctccaccgctcc-tccctcctc 118280
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 tgatcgccgcggcgggcggcca 90 |||||||||||||||||||||| Sbjct: 2328501 tgatcgccgcggcgggcggcca 2328480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gaccagctcgccggccttga 184 |||||||||||||||||||| Sbjct: 6252147 gaccagctcgccggccttga 6252166
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 gcgccgtcttcttctccgacga 157 |||||||||||||||||||||| Sbjct: 72912 gcgccgtcttcttctccgacga 72891
>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete sequence Length = 285158 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcc 39 |||||||||||||||||||||| Sbjct: 170090 caccaccgcctcctccaccgcc 170111
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 gcgccgtcttcttctccgacga 157 |||||||||||||||||||||| Sbjct: 24482 gcgccgtcttcttctccgacga 24461
>ref|XM_467639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 197 ccgctgcttcgtcggcctccg 217
>ref|XM_506956.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643A10.28 mRNA Length = 1753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 198 ccgctgcttcgtcggcctccg 218
>ref|NM_138515.1| Rattus norvegicus cytochrome P450, family 2, subfamily d, polypeptide 22 (Cyp2d22), mRNA Length = 2746 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccaccgccccttccctcctctg 53 |||||||||||||||||||| |||| Sbjct: 2039 cctccaccgccccttccctcatctg 2015
>gb|U41015.2| Caenorhabditis elegans cosmid F20B6, complete sequence Length = 39499 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cttcttctccgacgacggcct 163 ||||||||||||||||||||| Sbjct: 14618 cttcttctccgacgacggcct 14598
>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1 Contains a novel gene encoding a protein similar to bacterial N-acetylneuraminic acid condensing enzyme (NEUB) and 3' end of the TBCID2 gene, a TRIM14 gene encoding tripartite motif-containing 14 (KIAA0129), the CORO2A gene encoding Coronin 2A (actin-binding protein), TBC1D2 gene encoding TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands, complete sequence Length = 201300 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 cctcctccaccgccccttccctcct 50 ||||||||||| ||||||||||||| Sbjct: 176359 cctcctccacctccccttccctcct 176335
>emb|Y09602.1|HVCPMII H.vulgare gene encoding serine carboxypeptidase II, CP-MII Length = 6225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcgccgcggcgggcggccatg 92 ||||||||||||||||||||| Sbjct: 2379 tcgccgcggcgggcggccatg 2399
>emb|X84057.1|SBHYDMAN S.bicolor mRNA for p-(S)-hydroxymandelonitrile lyase Length = 1814 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgc 38 ||||||||||||||||||||| Sbjct: 1509 caccaccgcctcctccaccgc 1529
>emb|X52029.1|RSIID4G Ratts norvegicus P450 IID4 gene Length = 9448 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccaccgccccttccctcctctg 53 |||||||||||||||||||| |||| Sbjct: 6236 cctccaccgccccttccctcatctg 6212
>ref|NM_011490.1| Mus musculus staufen (RNA binding protein) homolog 1 (Drosophila) (Stau1), mRNA Length = 2860 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcggc 59 ||||| ||||||||||||||||||| Sbjct: 150 ccgcctcttccctcctctggtcggc 174
>gb|AE011833.1| Xanthomonas axonopodis pv. citri str. 306, section 211 of 469 of the complete genome Length = 10287 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 aagcaccaccgcctcctccaccgcc 39 ||||||||||||||| ||||||||| Sbjct: 1662 aagcaccaccgcctcgtccaccgcc 1638
>ref|NM_138132.1| Drosophila melanogaster CG9083-RA (CG9083), mRNA Length = 1186 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 accaccgcctcctccaccgcc 39 ||||||||||||||||||||| Sbjct: 336 accaccgcctcctccaccgcc 316
>gb|AY094834.1| Drosophila melanogaster LD42296 full insert cDNA Length = 1204 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 accaccgcctcctccaccgcc 39 ||||||||||||||||||||| Sbjct: 336 accaccgcctcctccaccgcc 316
>ref|XM_683168.1| PREDICTED: Danio rerio similar to HLA-B associated transcript 2 (LOC559795), mRNA Length = 5229 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgccccttccc 46 |||||||||| ||||||||||| |||||| Sbjct: 4903 caccaccgccccctccaccgcctcttccc 4875
>ref|XM_684887.1| PREDICTED: Danio rerio nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 (nfkbil1), mRNA Length = 7291 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgccccttccc 46 |||||||||| ||||||||||| |||||| Sbjct: 4675 caccaccgccccctccaccgcctcttccc 4647
>ref|XM_683740.1| PREDICTED: Danio rerio similar to HLA-B associated transcript 2 (LOC560337), mRNA Length = 5694 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgccccttccc 46 |||||||||| ||||||||||| |||||| Sbjct: 5464 caccaccgccccctccaccgcctcttccc 5436
>ref|NM_076310.3| Caenorhabditis elegans Vacuolar H ATPase family member (vha-12) (vha-12) mRNA, complete cds Length = 1901 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cttcttctccgacgacggcct 163 ||||||||||||||||||||| Sbjct: 1271 cttcttctccgacgacggcct 1251
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 30576247 ccgctgcttcgtcggcctccg 30576267
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 accaccgcctcctccaccgcc 39 ||||||||||||||||||||| Sbjct: 58947 accaccgcctcctccaccgcc 58927
>gb|BC093609.1| Rattus norvegicus cytochrome P450, family 2, subfamily d, polypeptide 22, mRNA (cDNA clone MGC:105324 IMAGE:7319137), complete cds Length = 2778 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccaccgccccttccctcctctg 53 |||||||||||||||||||| |||| Sbjct: 2056 cctccaccgccccttccctcatctg 2032
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgacgccggtgcgcgccagc 297 ||||||||||||||||||||| Sbjct: 5983141 ccgacgccggtgcgcgccagc 5983161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gaccagctcgccggccttgac 185 ||||||||||||||||||||| Sbjct: 3855107 gaccagctcgccggccttgac 3855127
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 88255 ccgctgcttcgtcggcctccg 88275
>dbj|AK104342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B08, full insert sequence Length = 1684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 197 ccgctgcttcgtcggcctccg 217
>dbj|AK065796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041F02, full insert sequence Length = 1752 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ccgctgcttcgtcggcctccg 265 ||||||||||||||||||||| Sbjct: 198 ccgctgcttcgtcggcctccg 218
>emb|BX465837.11| Zebrafish DNA sequence from clone DKEY-27C15 in linkage group 19, complete sequence Length = 206154 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgccccttccc 46 |||||||||| ||||||||||| |||||| Sbjct: 12611 caccaccgccccctccaccgcctcttccc 12583
>gb|AF061942.1|AF061942 Mus musculus RNA-binding protein staufen mRNA, complete cds Length = 2860 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcggc 59 ||||| ||||||||||||||||||| Sbjct: 150 ccgcctcttccctcctctggtcggc 174
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 accaccgcctcctccaccgcc 39 ||||||||||||||||||||| Sbjct: 211251 accaccgcctcctccaccgcc 211231
>gb|U48220.1|RNU48220 Rattus norvegicus cytochrome P450 2D18 mRNA, complete cds Length = 2746 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccaccgccccttccctcctctg 53 |||||||||||||||||||| |||| Sbjct: 2039 cctccaccgccccttccctcatctg 2015
>gb|BC055180.1| Danio rerio nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, mRNA (cDNA clone IMAGE:5605014), complete cds Length = 1783 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccgccccttccc 46 |||||||||| ||||||||||| |||||| Sbjct: 1032 caccaccgccccctccaccgcctcttccc 1004
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgccc 40 ||||||||||||||||||||| Sbjct: 4623303 ccaccgcctcctccaccgccc 4623323
>dbj|AB038354.1| Methylobacillus glycogenes genes for Ala-tRNA synthetase, aspartate kinase, complete cds Length = 2940 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gaccagctcgccggccttgac 185 ||||||||||||||||||||| Sbjct: 1260 gaccagctcgccggccttgac 1240
>ref|XM_481215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3027 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccgcggcgggcggccatg 92 |||||||||||||||||||| Sbjct: 269 cgccgcggcgggcggccatg 288
>gb|CP000146.1| Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence Length = 105284 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggcggccatgtgggtcgaga 102 |||||||||||||||||||| Sbjct: 82324 ggcggccatgtgggtcgaga 82343
>gb|BC082277.1| Mus musculus staufen (RNA binding protein) homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:6315111), partial cds Length = 3000 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 87 ccgcctcttccctcctctggtcgg 110
>gb|AC010211.10| Drosophila melanogaster clone BACR26C09, complete sequence Length = 177855 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 35163 ccaccgcctcctccaccgcc 35182
>ref|XM_365032.1| Magnaporthe grisea 70-15 hypothetical protein (MG09877.4) partial mRNA Length = 8238 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 accagctcgccggccttgac 185 |||||||||||||||||||| Sbjct: 7868 accagctcgccggccttgac 7849
>gb|BC049788.1| Mus musculus Wiskott-Aldrich syndrome protein interacting protein, mRNA (cDNA clone MGC:59392 IMAGE:6514406), complete cds Length = 4443 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 1014 gcaccacctcctcctccaccgccc 1037
>ref|XM_322326.1| Neurospora crassa OR74A predicted protein (NCU00241.1) partial mRNA Length = 2760 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 gaagcaccaccgcctcctccaccgcccc 41 |||||||| ||||||||||| ||||||| Sbjct: 7 gaagcaccgccgcctcctccgccgcccc 34
>ref|XM_952619.1| Neurospora crassa OR74A hypothetical protein (NCU00241.1) partial mRNA Length = 2760 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 gaagcaccaccgcctcctccaccgcccc 41 |||||||| ||||||||||| ||||||| Sbjct: 7 gaagcaccgccgcctcctccgccgcccc 34
>gb|BC012959.1| Mus musculus staufen (RNA binding protein) homolog 1 (Drosophila), mRNA (cDNA clone MGC:13708 IMAGE:4188394), complete cds Length = 2879 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 114 ccgcctcttccctcctctggtcgg 137
>ref|NM_153138.2| Mus musculus Wiskott-Aldrich syndrome protein interacting protein (Waspip), mRNA Length = 4443 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 1014 gcaccacctcctcctccaccgccc 1037
>gb|AC091506.2| Sus scrofa clone RP44-348C20, complete sequence Length = 194809 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 174263 ccaccgcctcctccaccgcc 174282
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tcgccgcggcgggcggccat 91 |||||||||||||||||||| Sbjct: 305681 tcgccgcggcgggcggccat 305662
>gb|BT009951.1| Drosophila melanogaster RH51767 full insert cDNA Length = 1770 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 921 ccaccgcctcctccaccgcc 902
>emb|Z46806.1|RSZ46806 Rhodobacter sphaeroides yntC, napK, napE, napF, napD, naB and napC genes Length = 5763 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggcggccatgtgggtcgaga 102 |||||||||||||||||||| Sbjct: 3635 ggcggccatgtgggtcgaga 3654
>emb|X12455.1|AVDHLAAT A. vinelandii gene for dihydrolipoyltransacetylase, E2 component of pyruvate dehydrogenase complex (EC 2.3.1.12) Length = 2142 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 cggcctggaccagctcgccggccttgac 185 ||||||||||| | |||||||||||||| Sbjct: 905 cggcctggacctggtcgccggccttgac 878 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 cggcctggaccagctcgccggccttgac 185 ||||||||||| | |||||||||||||| Sbjct: 590 cggcctggacctggtcgccggccttgac 563
>ref|NM_001030849.1| Gallus gallus similar to zinc finger protein 341 (LOC419152), mRNA Length = 3215 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcccc 41 |||||||||||||||||| ||||| Sbjct: 576 caccaccgcctcctccacagcccc 599
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cgccggtgcgcgccagcatgtcga 304 |||||||||||||||||| ||||| Sbjct: 68206 cgccggtgcgcgccagcacgtcga 68229
>emb|AJ437262.1|MMU437262 Mus musculus mRNA for WASP interacting protein (WIP gene) Length = 1482 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 892 gcaccacctcctcctccaccgccc 915
>emb|AJ720232.1| Gallus gallus mRNA for hypothetical protein, clone 13c20 Length = 3215 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccgcccc 41 |||||||||||||||||| ||||| Sbjct: 576 caccaccgcctcctccacagcccc 599
>gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181528 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||||||||| |||||||| Sbjct: 34050 agcaccaccgcctccgccaccgcc 34027
>gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequence Length = 38754 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 cccgaccccgacgccggtgcgcgc 293 |||| ||||||||||||||||||| Sbjct: 12462 cccgtccccgacgccggtgcgcgc 12485
>gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequence Length = 40824 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cccgaccccgacgccggtgcgcgc 293 |||| ||||||||||||||||||| Sbjct: 31018 cccgtccccgacgccggtgcgcgc 30995
>gb|DQ397849.1| Cenarchaeum symbiosum clone C08E01, complete sequence Length = 37303 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 cccgaccccgacgccggtgcgcgc 293 |||| ||||||||||||||||||| Sbjct: 20746 cccgtccccgacgccggtgcgcgc 20769
>gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequence Length = 43141 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 33192 ccaccgcctcctccaccgcc 33173
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccgcctcctccaccg 37 |||||||||||||||||||| Sbjct: 2687801 caccaccgcctcctccaccg 2687820
>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 79550 ccaccgcctcctccaccgcc 79569
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 50076 ccaccgcctcctccaccgcc 50057
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 12496 ccaccgcctcctccaccgcc 12515
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 160010 ccaccgcctcctccaccgcc 160029
>ref|NM_001014571.1| Drosophila melanogaster formin 3 CG33556-PA (form3) mRNA, complete cds Length = 6079 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||||||||| |||||||| Sbjct: 1647 agcaccaccgcctccgccaccgcc 1670
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cgacgccggtgcgcgccagc 297 |||||||||||||||||||| Sbjct: 3715450 cgacgccggtgcgcgccagc 3715469
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tgcgcgccagcatgtcgacg 306 |||||||||||||||||||| Sbjct: 29452 tgcgcgccagcatgtcgacg 29433
>ref|NM_168168.1| Drosophila melanogaster CG32396-RA (CG32396), mRNA Length = 1649 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 1450 ccaccgcctcctccaccgcc 1431
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgcgccgtcttcttctccg 153 |||||||||||||||||||| Sbjct: 719297 ccgcgccgtcttcttctccg 719278
>ref|NM_165304.1| Drosophila melanogaster CG10084-RB, transcript variant B (swm), mRNA Length = 4120 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 2292 ccaccgcctcctccaccgcc 2273
>ref|NM_141374.1| Drosophila melanogaster Osiris 12 CG1154-RA (Osi12), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 922 ccaccgcctcctccaccgcc 903
>ref|NM_140734.1| Drosophila melanogaster CG7564-RA (CG7564), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 1284 ccaccgcctcctccaccgcc 1265
>ref|NM_136132.4| Drosophila melanogaster CG10084-RA, transcript variant A (swm), mRNA Length = 4150 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 2322 ccaccgcctcctccaccgcc 2303
>dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465 Length = 158570 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 agagggaggtcatggtggtg 341 |||||||||||||||||||| Sbjct: 244 agagggaggtcatggtggtg 225
>gb|AY095056.1| Drosophila melanogaster LD45403 full insert cDNA Length = 4028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 2316 ccaccgcctcctccaccgcc 2297
>gb|AY089468.1| Drosophila melanogaster AT27896 full insert cDNA Length = 1627 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 1410 ccaccgcctcctccaccgcc 1391
>dbj|AK139532.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020003I05 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 3184 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 97 ccgcctcttccctcctctggtcgg 120
>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183714 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 161364 ccaccgcctcctccaccgcc 161345
>dbj|AK145826.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530003I16 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 2849 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 117 ccgcctcttccctcctctggtcgg 140
>dbj|AK160979.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022428C16 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 2951 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 91 ccgcctcttccctcctctggtcgg 114
>dbj|AK156547.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830029E14 product:Wiskott-Aldrich syndrome protein interacting protein, full insert sequence Length = 4478 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 1096 gcaccacctcctcctccaccgccc 1119
>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone BACR27M12, complete sequence Length = 157766 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 82957 ccaccgcctcctccaccgcc 82938
>dbj|AK159781.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420031A10 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 2833 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 120 ccgcctcttccctcctctggtcgg 143
>dbj|AK159602.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025H14 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 2928 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 67 ccgcctcttccctcctctggtcgg 90
>dbj|AK168092.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730057E14 product:Wiskott-Aldrich syndrome protein interacting protein, full insert sequence Length = 2395 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 245 gcaccacctcctcctccaccgccc 268
>emb|CR524277.1| Gallus gallus finished cDNA, clone ChEST914j4 Length = 1076 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 caccgcctcctccaccgccc 40 |||||||||||||||||||| Sbjct: 771 caccgcctcctccaccgccc 790
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 108633 ccaccgcctcctccaccgcc 108652
>ref|NM_060373.2| Caenorhabditis elegans PArtner of DroSHa (DRSH-1 interactor) family member (pash-1) (pash-1) mRNA, complete cds Length = 2629 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||| |||||||||||||| Sbjct: 2244 agcaccaccacctcctccaccgcc 2267
>dbj|AK031046.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5832433I20 product:WASP INTERACTING PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 4020 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 1058 gcaccacctcctcctccaccgccc 1081
>dbj|AK030890.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830444H09 product:hypothetical Arginine-rich region containing protein, full insert sequence Length = 3597 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 91 ccgcctcttccctcctctggtcgg 114
>dbj|AK005002.2| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300014G04 product:staufen (RNA binding protein) homolog 1 (Drosophila), full insert sequence Length = 2789 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 91 ccgcctcttccctcctctggtcgg 114
>dbj|AK030788.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830401L18 product:unclassifiable, full insert sequence Length = 3597 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 91 ccgcctcttccctcctctggtcgg 114
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccgcggcgggcggccatg 92 |||||||||||||||||||| Sbjct: 10651934 cgccgcggcgggcggccatg 10651915
>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence Length = 159692 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 aagagttgtactgccaaatc 540 |||||||||||||||||||| Sbjct: 112168 aagagttgtactgccaaatc 112149
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccgcggcgggcggccatg 92 |||||||||||||||||||| Sbjct: 7669461 cgccgcggcgggcggccatg 7669480
>emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on chromosome 2, complete sequence Length = 194013 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 taacccggtactagaagtcagtag 451 |||||| ||||||||||||||||| Sbjct: 187760 taaccctgtactagaagtcagtag 187783
>dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK20 Length = 78172 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccgcctcctccaccg 37 |||||||||||||||||||| Sbjct: 63427 caccaccgcctcctccaccg 63408
>emb|BX548169.4| Pig DNA sequence from clone XX-548A10, complete sequence Length = 101248 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 agcaccaccgcctcctccaccgcccctt 43 ||||||||| ||| |||||||||||||| Sbjct: 24739 agcaccacctcctgctccaccgcccctt 24712
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccgcggcgggcggccatg 92 |||||||||||||||||||| Sbjct: 79574 cgccgcggcgggcggccatg 79555
>dbj|AK102100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083N01, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccgcggcgggcggccatg 92 |||||||||||||||||||| Sbjct: 269 cgccgcggcgggcggccatg 288
>gb|BT021417.1| Drosophila melanogaster LD04387 full insert cDNA Length = 1605 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 1285 ccaccgcctcctccaccgcc 1266
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 20775 ccaccgcctcctccaccgcc 20756
>gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_17, complete sequence Length = 211316 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 acaatctctctggttttgtt 368 |||||||||||||||||||| Sbjct: 177046 acaatctctctggttttgtt 177065
>gb|AF069545.1|AF069545 Rhodobacter sphaeroides f. sp. denitrificans NapE (napE), NapF (napF), NapD (napD), periplasmic nitrate reductase precursor (napA), cytochrome c precursor (napB), and membranous tetrahemic cytochrome c (napC) genes, complete cds Length = 7497 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggcggccatgtgggtcgaga 102 |||||||||||||||||||| Sbjct: 2748 ggcggccatgtgggtcgaga 2767
>emb|Z81125.1|CET22A3 Caenorhabditis elegans Cosmid T22A3, complete sequence Length = 36051 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||| |||||||||||||| Sbjct: 26654 agcaccaccacctcctccaccgcc 26677
>gb|AE003663.4| Drosophila melanogaster chromosome 2L, section 72 of 83 of the complete sequence Length = 290667 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 54576 ccaccgcctcctccaccgcc 54557
>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete sequence Length = 255329 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 137851 ccaccgcctcctccaccgcc 137832
>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete sequence Length = 285494 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||||||||| |||||||| Sbjct: 194679 agcaccaccgcctccgccaccgcc 194702
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete sequence Length = 290640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 28544 ccaccgcctcctccaccgcc 28525
>dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-285P16, complete sequence Length = 171738 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 acaatctctctggttttgtt 368 |||||||||||||||||||| Sbjct: 110615 acaatctctctggttttgtt 110596
>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete sequence Length = 292632 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 239914 ccaccgcctcctccaccgcc 239895
>dbj|AB061681.1| Drosophila melanogaster ah1644 mRNA, complete cds Length = 6078 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agcaccaccgcctcctccaccgcc 39 ||||||||||||||| |||||||| Sbjct: 1646 agcaccaccgcctccgccaccgcc 1669
>gb|AC005428.1|AC005428 Drosophila melanogaster DNA sequence (P1 DS05231 (D342)), complete sequence Length = 87835 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 33357 ccaccgcctcctccaccgcc 33376
>gb|DQ228487.1| Uncultured bacterium 2063G putative membrane protein, putative cardiolipin synthases/phospholipase D, conserved membrane protein, and putative polyketide synthase genes, complete cds; and putative xanthine/uracil permease gene, partial cds Length = 16557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cctggaccagctcgccggcc 180 |||||||||||||||||||| Sbjct: 11767 cctggaccagctcgccggcc 11786
>emb|AL928813.10| Mouse DNA sequence from clone RP23-325P5 on chromosome 2, complete sequence Length = 151207 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 gcaccaccgcctcctccaccgccc 40 |||||||| ||||||||||||||| Sbjct: 9436 gcaccacctcctcctccaccgccc 9413
>gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8H12 complete sequence Length = 103576 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccgcctcctccaccgcc 39 |||||||||||||||||||| Sbjct: 97611 ccaccgcctcctccaccgcc 97592
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ggagcagaggggagcaacac 498 |||||||||||||||||||| Sbjct: 80742 ggagcagaggggagcaacac 80723
>emb|AL591711.22| Mouse DNA sequence from clone RP23-19L12 on chromosome 2, complete sequence Length = 197743 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ccgccccttccctcctctggtcgg 58 ||||| |||||||||||||||||| Sbjct: 68898 ccgcctcttccctcctctggtcgg 68875
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 atgtcgacgtcgttctcgtc 317 |||||||||||||||||||| Sbjct: 3319 atgtcgacgtcgttctcgtc 3300
>dbj|AB016290.1| Rhodobacter sphaeroides f. sp. denitrificans napK, napE, napF, napD, napA, napB and napC genes, partial and complete cds Length = 7517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggcggccatgtgggtcgaga 102 |||||||||||||||||||| Sbjct: 3647 ggcggccatgtgggtcgaga 3666
>emb|AL645531.10| Mouse DNA sequence from clone RP23-191E19 on chromosome 4, complete sequence Length = 97801 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 agagggaggtcatggtggtg 341 |||||||||||||||||||| Sbjct: 16334 agagggaggtcatggtggtg 16315 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,618,299 Number of Sequences: 3902068 Number of extensions: 4618299 Number of successful extensions: 105248 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103666 Number of HSP's gapped (non-prelim): 1569 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
