ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41h21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full insert sequence Length = 1526 Score = 83.8 bits (42), Expect = 9e-14 Identities = 90/106 (84%) Strand = Plus / Plus Query: 1 agcagcaggaacggtgatgacgctgtcatcgtgggctacctcgagcgtggaggaggtggc 60 |||||||||||| | ||||| |||||||| |||||||| || || || |||||||| || Sbjct: 369 agcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgc 428 Query: 61 ctcgactgggccggggatccgcttcttccagctctacgtgtacaag 106 ||| ||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 429 ctcaactggaccaggaatccgtttcttccagctatacgtgtacaag 474
>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full insert sequence Length = 1522 Score = 83.8 bits (42), Expect = 9e-14 Identities = 90/106 (84%) Strand = Plus / Plus Query: 1 agcagcaggaacggtgatgacgctgtcatcgtgggctacctcgagcgtggaggaggtggc 60 |||||||||||| | ||||| |||||||| |||||||| || || || |||||||| || Sbjct: 365 agcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgc 424 Query: 61 ctcgactgggccggggatccgcttcttccagctctacgtgtacaag 106 ||| ||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 425 ctcaactggaccaggaatccgtttcttccagctatacgtgtacaag 470
>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full insert sequence Length = 1586 Score = 83.8 bits (42), Expect = 9e-14 Identities = 90/106 (84%) Strand = Plus / Plus Query: 1 agcagcaggaacggtgatgacgctgtcatcgtgggctacctcgagcgtggaggaggtggc 60 |||||||||||| | ||||| |||||||| |||||||| || || || |||||||| || Sbjct: 429 agcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgc 488 Query: 61 ctcgactgggccggggatccgcttcttccagctctacgtgtacaag 106 ||| ||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 489 ctcaactggaccaggaatccgtttcttccagctatacgtgtacaag 534
>gb|AY108197.1| Zea mays PCO065133 mRNA sequence Length = 1667 Score = 83.8 bits (42), Expect = 9e-14 Identities = 78/90 (86%) Strand = Plus / Plus Query: 17 atgacgctgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccgggg 76 ||||| ||||| || ||||| || || ||||| |||||||| |||||||| ||||| ||| Sbjct: 524 atgacactgtcgtcctgggcaacttcaagcgtcgaggaggttgcctcgaccgggccaggg 583 Query: 77 atccgcttcttccagctctacgtgtacaag 106 ||||||||||||||||| ||||| |||||| Sbjct: 584 atccgcttcttccagctatacgtctacaag 613
>ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 383 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 442 Query: 84 tcttccagct 93 |||||||||| Sbjct: 443 tcttccagct 452
>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA Length = 1501 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 424 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 483 Query: 84 tcttccagct 93 |||||||||| Sbjct: 484 tcttccagct 493
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 2831676 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 2831735 Query: 84 tcttccagct 93 |||||||||| Sbjct: 2831736 tcttccagct 2831745
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 135237 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 135296 Query: 84 tcttccagct 93 |||||||||| Sbjct: 135297 tcttccagct 135306
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 1963 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 2022 Query: 84 tcttccagct 93 |||||||||| Sbjct: 2023 tcttccagct 2032
>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full insert sequence Length = 1738 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 682 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 741 Query: 84 tcttccagct 93 |||||||||| Sbjct: 742 tcttccagct 751
>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full insert sequence Length = 1439 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 383 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 442 Query: 84 tcttccagct 93 |||||||||| Sbjct: 443 tcttccagct 452
>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full insert sequence Length = 1501 Score = 60.0 bits (30), Expect = 1e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| |||||||| || ||||| |||||||| ||||| ||||| || ||||| || | Sbjct: 424 tgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtt 483 Query: 84 tcttccagct 93 |||||||||| Sbjct: 484 tcttccagct 493
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 23 ctgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgc 82 |||||||| |||||||| || || || |||||||| ||||| ||||| || || ||||| Sbjct: 32326764 ctgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgt 32326823 Query: 83 ttcttccagctctacgt 99 ||||||||||| ||||| Sbjct: 32326824 ttcttccagctatacgt 32326840
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 58.0 bits (29), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 23 ctgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgc 82 |||||||| |||||||| || || || |||||||| ||||| ||||| || || ||||| Sbjct: 60531 ctgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgt 60590 Query: 83 ttcttccagctctacgt 99 ||||||||||| ||||| Sbjct: 60591 ttcttccagctatacgt 60607
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 23 ctgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgc 82 |||||||| |||||||| || || || |||||||| ||||| ||||| || || ||||| Sbjct: 32417274 ctgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgt 32417333 Query: 83 ttcttccagctctacgt 99 ||||||||||| ||||| Sbjct: 32417334 ttcttccagctatacgt 32417350
>dbj|D14044.1|CUCGLOX Cucurbita cv. Kurokawa Amakuri mRNA for glycolate oxidase, complete cds Length = 1381 Score = 52.0 bits (26), Expect = 3e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 29 tcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgcttcttc 88 |||||||||||||| || ||||| || || ||||| ||||| || || || || |||||| Sbjct: 412 tcgtgggctacctctagtgtggaagaagttgcctccactggacctggcattcgtttcttc 471 Query: 89 cagctctacgtgtacaag 106 ||||| || ||||||||| Sbjct: 472 cagctatatgtgtacaag 489
>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds Length = 1473 Score = 50.1 bits (25), Expect = 0.001 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1 agcagcaggaacggtgatgacgctgtcatcgtgggctacctcgagcgtggaggaggtggc 60 |||||||||||| | ||||| |||||||| |||||||| || || || |||||||| || Sbjct: 335 agcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgc 394 Query: 61 ctcgactgg 69 ||| ||||| Sbjct: 395 ctcaactgg 403
>ref|NM_180253.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.2 mRNA, complete cds Length = 1494 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 469 gggccagggatccgattcttccagctctatgtatacaaga 508
>ref|NM_180254.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.3 mRNA, complete cds Length = 1586 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 561 gggccagggatccgattcttccagctctatgtatacaaga 600
>ref|NM_001035617.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.4 mRNA, complete cds Length = 1482 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 457 gggccagggatccgattcttccagctctatgtatacaaga 496
>ref|NM_112302.2| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.1 mRNA, complete cds Length = 1453 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 428 gggccagggatccgattcttccagctctatgtatacaaga 467
>gb|AY762614.1| Brassica napus glycolate oxidase mRNA, complete cds Length = 1104 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 358 gggccagggatccgattcttccagctctatgtatacaaga 397
>gb|AY074830.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1104 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 358 gggccagggatccgattcttccagctctatgtatacaaga 397
>gb|AY065122.1| Arabidopsis thaliana glycolate oxidase (At3g14420; MOA2.2) mRNA, complete cds Length = 1032 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 33 gggccagggatccgattcttccagctctatgtatacaaga 72
>gb|AF428328.1|AF428328 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1356 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 411 gggccagggatccgattcttccagctctatgtatacaaga 450
>gb|AF428396.1|AF428396 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1377 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 404 gggccagggatccgattcttccagctctatgtatacaaga 443
>gb|AY053412.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1427 Score = 48.1 bits (24), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 409 gggccagggatccgattcttccagctctatgtatacaaga 448
>ref|XM_502755.1| Yarrowia lipolytica CLIB122, YALI0D12661g predicted mRNA Length = 1149 Score = 44.1 bits (22), Expect = 0.080 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 cttcttccagctctacgtgtacaaga 107 |||||||||||||||||||| ||||| Sbjct: 393 cttcttccagctctacgtgttcaaga 418
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.080 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 cttcttccagctctacgtgtacaaga 107 |||||||||||||||||||| ||||| Sbjct: 1584881 cttcttccagctctacgtgttcaaga 1584906
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.32 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgctt 84 |||||| |||||||| || || || |||||||| ||||| |||||||| | ||| | || Sbjct: 5687757 gtcatcttgggctacttcaagtgttgaggaggtcgcctcaactgggccttgaatctgttt 5687816 Query: 85 cttccagct 93 ||||||||| Sbjct: 5687817 cttccagct 5687825
>dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MOA2 Length = 52232 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctcta 96 ||||| |||||||| |||||||||||||| Sbjct: 2696 gggccagggatccgattcttccagctcta 2724
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 42.1 bits (21), Expect = 0.32 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgctt 84 |||||| |||||||| || || || |||||||| ||||| |||||||| | ||| | || Sbjct: 143133 gtcatcttgggctacttcaagtgttgaggaggtcgcctcaactgggccttgaatctgttt 143192 Query: 85 cttccagct 93 ||||||||| Sbjct: 143193 cttccagct 143201
>dbj|AK061018.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C01, full insert sequence Length = 1144 Score = 42.1 bits (21), Expect = 0.32 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgctt 84 |||||| |||||||| || || || |||||||| ||||| |||||||| | ||| | || Sbjct: 541 gtcatcttgggctacttcaagtgttgaggaggtcgcctcaactgggccttgaatctgttt 600 Query: 85 cttccagct 93 ||||||||| Sbjct: 601 cttccagct 609
>dbj|AK060371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-B06, full insert sequence Length = 1444 Score = 42.1 bits (21), Expect = 0.32 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgctt 84 |||||| |||||||| || || || |||||||| ||||| |||||||| | ||| | || Sbjct: 841 gtcatcttgggctacttcaagtgttgaggaggtcgcctcaactgggccttgaatctgttt 900 Query: 85 cttccagct 93 ||||||||| Sbjct: 901 cttccagct 909
>gb|U80071.1|MCU80071 Mesembryanthemum crystallinum glycolate oxidase (GOX) mRNA, complete cds Length = 1409 Score = 42.1 bits (21), Expect = 0.32 Identities = 72/89 (80%) Strand = Plus / Plus Query: 17 atgacgctgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccgggg 76 ||||| ||||| || |||||||| || || ||||| ||||| || || ||||| ||||| Sbjct: 374 atgacactgtcctcatgggctacatctagtgtggaagaggttgcttcaactggaccgggc 433 Query: 77 atccgcttcttccagctctacgtgtacaa 105 ||| | || ||||||||||| || ||||| Sbjct: 434 atcagatttttccagctctatgtatacaa 462
>ref|NM_112301.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14415 mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 1.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 358 gggccaggaatccgattcttccagctctatgtatacaaga 397
>gb|AY389556.1| Hyacinthus orientalis glycolate oxidase mRNA, partial cds Length = 758 Score = 40.1 bits (20), Expect = 1.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 32 tgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgcttcttccag 91 |||||||| || ||||| || ||||| || || ||||| || ||||| |||||||||||| Sbjct: 358 tgggctacttccagcgttgaagaggttgcatcaactggtccagggattcgcttcttccag 417
>gb|AY136402.1| Arabidopsis thaliana glycolate oxidase (At3g14415) mRNA, complete cds Length = 1515 Score = 40.1 bits (20), Expect = 1.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 529 gggccaggaatccgattcttccagctctatgtatacaaga 568
>gb|AY058095.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1471 Score = 40.1 bits (20), Expect = 1.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 425 gggccaggaatccgattcttccagctctatgtatacaaga 464
>dbj|AK221716.1| Arabidopsis thaliana mRNA for glycolate oxidase like protein, partial cds, clone: RAFL16-93-L18 Length = 1142 Score = 40.1 bits (20), Expect = 1.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 398 gggccaggaatccgattcttccagctctatgtatacaaga 437
>gb|BT002129.1| Arabidopsis thaliana glycolate oxidase (At3g14415) mRNA, complete cds Length = 1241 Score = 40.1 bits (20), Expect = 1.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 gggccggggatccgcttcttccagctctacgtgtacaaga 107 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 358 gggccaggaatccgattcttccagctctatgtatacaaga 397
>ref|NM_125454.2| Arabidopsis thaliana unknown protein AT5G60610 mRNA, complete cds Length = 1441 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 atccgcttcttccagctct 95 ||||||||||||||||||| Sbjct: 873 atccgcttcttccagctct 855
>ref|XM_953601.1| Neurospora crassa OR74A hypothetical protein ( (AL513410) related to thymidylate kinase [Neurospora crassa OR74A] ) (NCU07773.1) partial mRNA Length = 930 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 827 cgagcgtggaggaggtggc 845
>ref|XM_328478.1| Neurospora crassa OR74A hypothetical protein ( (AL513410) related to thymidylate kinase [Neurospora crassa OR74A] ) (NCU07773.1) partial mRNA Length = 930 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 827 cgagcgtggaggaggtggc 845
>gb|BT014053.1| Lycopersicon esculentum clone 133150F, mRNA sequence Length = 1386 Score = 38.2 bits (19), Expect = 4.9 Identities = 67/83 (80%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| ||||| || || ||||| |||||||| || || || || || || ||||| | Sbjct: 418 tgtcatcctgggccacttccagcgttgaggaggttgcttcaacaggacctggcatccgtt 477 Query: 84 tcttccagctctacgtgtacaag 106 |||||||||| || || |||||| Sbjct: 478 tcttccagctttatgtctacaag 500
>ref|XM_571503.1| Cryptococcus neoformans var. neoformans JEC21 importin beta-4 subunit (CNF00890) partial mRNA Length = 3519 Score = 38.2 bits (19), Expect = 4.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gctgtcatcgtgggctacctcga 44 |||||||||| |||||||||||| Sbjct: 2397 gctgtcatcgagggctacctcga 2419
>ref|XM_962071.1| PREDICTED: Tribolium castaneum similar to CG12690-PA (LOC655518), mRNA Length = 3426 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 agcaggaacggtgatgacg 22 ||||||||||||||||||| Sbjct: 91 agcaggaacggtgatgacg 109
>emb|X92888.1|LEGLYCOX L.esculentum mRNA for glycolate oxidase Length = 1008 Score = 38.2 bits (19), Expect = 4.9 Identities = 67/83 (80%) Strand = Plus / Plus Query: 24 tgtcatcgtgggctacctcgagcgtggaggaggtggcctcgactgggccggggatccgct 83 ||||||| ||||| || || ||||| |||||||| || || || || || || ||||| | Sbjct: 74 tgtcatcctgggccacttccagcgttgaggaggttgcttcaacaggacctggcatccgtt 133 Query: 84 tcttccagctctacgtgtacaag 106 |||||||||| || || |||||| Sbjct: 134 tcttccagctttatgtctacaag 156
>emb|AL513410.1|NC104H10 Neurospora crassa DNA linkage group VI Cosmid contig 104H10 Length = 108061 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 27673 cgagcgtggaggaggtggc 27691
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 137964 cgagcgtggaggaggtggc 137946
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 20926427 cgagcgtggaggaggtggc 20926445
>gb|AY085261.1| Arabidopsis thaliana clone 142077 mRNA, complete sequence Length = 1442 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 atccgcttcttccagctct 95 ||||||||||||||||||| Sbjct: 873 atccgcttcttccagctct 855
>dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24 Length = 77999 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 atccgcttcttccagctct 95 ||||||||||||||||||| Sbjct: 7991 atccgcttcttccagctct 7973
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cgagcgtggaggaggtggc 60 ||||||||||||||||||| Sbjct: 20937691 cgagcgtggaggaggtggc 20937709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 656,316 Number of Sequences: 3902068 Number of extensions: 656316 Number of successful extensions: 52828 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52628 Number of HSP's gapped (non-prelim): 200 length of query: 109 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 88 effective length of database: 17,151,101,840 effective search space: 1509296961920 effective search space used: 1509296961920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
