>gb|AF416331.1| Ruegeria sp. PR1b plasmid pSD25, complete sequence
          Length = 148650

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 65    atcggcctcgaccatggccaaca 87
             |||||||||||||||||||||||
Sbjct: 33434 atcggcctcgaccatggccaaca 33412

>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     cggcctcgaccatggccaac 86
              ||||||||||||||||||||
Sbjct: 225301 cggcctcgaccatggccaac 225282

>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     cggcctcgaccatggccaac 86
              ||||||||||||||||||||
Sbjct: 228694 cggcctcgaccatggccaac 228675

>ref|NM_192003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 26/29 (89%)
 Strand = Plus / Plus

                                        
Query: 45  cgggatggatcatggtnganatcggcctc 73
           |||| ||||||||||| || |||||||||
Sbjct: 407 cggggtggatcatggtcgagatcggcctc 435

>ref|XM_602103.2| PREDICTED: Bos taurus similar to development and differentiation
            enhancing factor-like 1 (LOC523797), mRNA
          Length = 4034

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    agcaaggaggaaggccagc 26
            |||||||||||||||||||
Sbjct: 2889 agcaaggaggaaggccagc 2871

>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 94     cccctcggacgagcccgtcctgt 116
              |||||||| ||||||||||||||
Sbjct: 801345 cccctcggccgagcccgtcctgt 801367

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 26/29 (89%)
 Strand = Plus / Minus

                                             
Query: 45       cgggatggatcatggtnganatcggcctc 73
                |||| ||||||||||| || |||||||||
Sbjct: 27775012 cggggtggatcatggtcgagatcggcctc 27774984

>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1117_G01
          Length = 125454

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 26/29 (89%)
 Strand = Plus / Minus

                                          
Query: 45    cgggatggatcatggtnganatcggcctc 73
             |||| ||||||||||| || |||||||||
Sbjct: 67067 cggggtggatcatggtcgagatcggcctc 67039

>dbj|AK105493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C03, full
           insert sequence
          Length = 1319

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 26/29 (89%)
 Strand = Plus / Plus

                                        
Query: 45  cgggatggatcatggtnganatcggcctc 73
           |||| ||||||||||| || |||||||||
Sbjct: 513 cggggtggatcatggtcgagatcggcctc 541

>ref|NM_211773.1| Eremothecium gossypii AGR046Cp (AGR046C), mRNA
          Length = 1164

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 94  cccctcggacgagcccgtcctgt 116
           |||||||| ||||||||||||||
Sbjct: 735 cccctcggccgagcccgtcctgt 713


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 650,135
Number of Sequences: 3902068
Number of extensions: 650135
Number of successful extensions: 40118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40085
Number of HSP's gapped (non-prelim): 33
length of query: 127
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 106
effective length of database: 17,151,101,840
effective search space: 1818016795040
effective search space used: 1818016795040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)