ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41h08 |
|---|---|
| Clone Library Name | barley_pub |
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 67.0 bits (162), Expect = 5e-11 Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 1/179 (0%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 +S I + +++ GA QI L+ E ++TP RL++++ ++ V+ LV+D Sbjct: 208 QSSRIRNTAIYGGAPKGPQIRDLQR-GVEICVATPGRLIDMLETGKTNLKRVTYLVMDEA 266 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRI-TKLTTNDSVAS 400 +D+ ++R I I D Q +FS + +A + LH I + + D A+ Sbjct: 267 DRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTAN 326 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 + V QHV CT +K SK +L H LE + + KVL+ A VA L+ L+++ Sbjct: 327 HN--VAQHVEVCTDFDKRSK---LLSH-LEKISQENGKVLIFVATKRVADDLTKFLRMD 379
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 66.2 bits (160), Expect = 9e-11 Identities = 44/146 (30%), Positives = 71/146 (48%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 L I S+ + G SI Q+ L+ + L++TP RLL+L A+ + V +LV+D Sbjct: 102 LNIRSLVVFGGVSINPQMMKLRG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR 160 Query: 230 FMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSA 409 +D+ I ++R + + Q +FS +A LLH + + AS Sbjct: 161 MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQ- 219 Query: 410 FVTQHVHFCTKEEKTSKVKEILEHVL 487 VTQHVHF K+ K +E+L H++ Sbjct: 220 -VTQHVHFVDKKRK----RELLSHMI 240
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 61.2 bits (147), Expect = 3e-09 Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 1/180 (0%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G+ SV ++ G + + QI LK + +I+TP RL +L +++ N++ LV+D Sbjct: 343 GLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKM 401 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL-HGRITKLTTNDSVASRSA 409 +D+ ++ I + D Q + S S +A++ L I + T D VA S Sbjct: 402 LDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSS- 460 Query: 410 FVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTV 589 V Q++ T+EEK S ++ L+ + S T KV++ + VA LSS L L ++V Sbjct: 461 -VKQNIIVTTEEEKWSHMQTFLQSM-----SSTDKVIVFVSRKAVADHLSSDLILGNISV 514
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 60.5 bits (145), Expect = 5e-09 Identities = 43/179 (24%), Positives = 92/179 (51%), Gaps = 1/179 (0%) Frame = +2 Query: 38 TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 TA+S G++ V+++ G S + QI +K+ +++TP RL++L++ AI++ V+ LV+D Sbjct: 247 TADS-GVNCVAVYGGVSKDDQIRKIKTAN--VVVATPGRLVDLINDGAINLGKVNYLVLD 303 Query: 218 GLKGFMDLNIIKELRS-IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 ++ +++++ I T + + Q +F+ + +A N ++ + + Sbjct: 304 EADRMLEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDE 363 Query: 395 ASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 S + +TQ V K +K K+ ++L N +S K+L+ A A ++ + LK Sbjct: 364 LSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDN-KILIFALYKKEASRIENFLK 421
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 60.1 bits (144), Expect = 7e-09 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSMLVI 214 ++L + +V + GA I+ QI+ LK E ++ TP R+++L++ A ++N V+ +V+ Sbjct: 639 KALNLRAVCAYGGAPIKDQIAELKR-GAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVL 697 Query: 215 DGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 D D+ ++ I + D Q +FS ++ +AR L I + SV Sbjct: 698 DEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSV 757 Query: 395 ASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 + +TQ V C +E+K ++ E+L ++ ++ A+ L+ A L L Sbjct: 758 VAPE--ITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLREL 813
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 59.7 bits (143), Expect = 9e-09 Identities = 41/148 (27%), Positives = 73/148 (49%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E +I+TP RLL+++ ++ V+ LV+D +D+ ++R I I D Q ++ Sbjct: 241 EIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 300 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L +I ++ S S +TQ V CT+ EK ++ + LE V+ Sbjct: 301 SATWPKEVQRLAHDYLKDQI-QVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETVM 359 Query: 488 ENHASKTAKVLLVAANDNVAQKLSSSLK 571 EN K +K L+ VA ++ L+ Sbjct: 360 EN---KESKCLIFTGTKRVADDITKFLR 384
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 57.8 bits (138), Expect = 3e-08 Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSMLVI 214 ++L + +V + GA I+ QI+ LK E ++ TP R+++L++ A ++N V+ +V+ Sbjct: 673 KALNLRAVCAYGGAPIKDQIAELKR-GAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 731 Query: 215 DGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 D D+ ++ I I D Q +FS ++ +AR L I + SV Sbjct: 732 DEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSV 791 Query: 395 ASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 + +TQ V ++ K ++ EIL ++ + A++ A+ L+ A L L Sbjct: 792 VAPE--ITQIVEVRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAADTLLREL 847
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 56.2 bits (134), Expect = 1e-07 Identities = 43/174 (24%), Positives = 82/174 (47%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 I + ++ G QI L+ E LI+TP RL++++ + ++ V+ LV+D + Sbjct: 215 IRNTCVYGGVPKSQQIRDLQR-GVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML 273 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + LH I ++ S S + Sbjct: 274 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLHDPI-QVQIGSLELSASHTI 332 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 TQ V T EK ++ + LE ++ S K+++ A+ +++S L+ E Sbjct: 333 TQIVEVLTDFEKRDRLAKHLETASQDQDS---KIIIFASTKRTCDEITSYLRTE 383
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/178 (23%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSMLVI 214 ++L + +V + GA I+ QI+ LK E ++ TP R+++L++ A ++N V+ +V+ Sbjct: 652 KALNLRAVCAYGGAPIKDQIADLKR-GAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVL 710 Query: 215 DGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 D D+ ++ I + D Q +FS ++ +AR L+ + + SV Sbjct: 711 DEADRMFDMGFEPQVMKILANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSV 770 Query: 395 ASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 + +TQ V ++++K ++ E+L ++ ++ A+ L+ A L L Sbjct: 771 VAPE--ITQIVEVRSEDKKFIRLLELLGNLYSTDENEDARALIFVERQEGADTLLREL 826
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 55.1 bits (131), Expect = 2e-07 Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSMLVI 214 ++LG+ + ++ GA I QI+ +K + +++TP RL++L++ + ++N V+ LV+ Sbjct: 574 KALGLRAACVYGGAPISEQIAEMKKTA-DIVVATPGRLIDLLTANSGRVTNLYRVTYLVL 632 Query: 215 DGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 D D+ ++ I I D Q +FS + ++AR +L + ++T V Sbjct: 633 DEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEIT----V 688 Query: 395 ASRS---AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSS 565 RS A + Q V +++ K ++ EIL + + K A+ L+ A L Sbjct: 689 GGRSVVAAEIEQIVEVRSEDTKFHRLLEILGELY--NREKDARTLIFVDRQEAADDLLKD 746 Query: 566 L 568 L Sbjct: 747 L 747
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 54.3 bits (129), Expect = 4e-07 Identities = 37/148 (25%), Positives = 72/148 (48%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E I+TP RL++++ ++ V+ LV+D +D+ ++R I G I D Q ++ Sbjct: 259 EVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMW 318 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L I ++ + + +TQ V T+ EK ++ + +E V+ Sbjct: 319 SATWPKEVRALASDFLQDFI-QVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVM 377 Query: 488 ENHASKTAKVLLVAANDNVAQKLSSSLK 571 EN K K+L+ VA +++ L+ Sbjct: 378 EN---KENKILIFVGTKRVADEITRFLR 402
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 53.5 bits (127), Expect = 6e-07 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 + + +V ++ GA Q K+ +I TP RLL+L++ +ID S V LV+D Sbjct: 261 QGTNLKAVVVYGGAPKSEQARAAKNAS--VIIGTPGRLLDLINDGSIDCSQVGYLVLDEA 318 Query: 224 KGFMDLNIIKELRSIRG-----TISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTND 388 +D +++R+I T +G Q FS +S +A L + K+T Sbjct: 319 DRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPV-KITIGS 377 Query: 389 SVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHAS---KTAKVLLVAANDNVAQKLS 559 + S +TQ V ++ SK + +L+++L H S K K+L+ A ++ Sbjct: 378 DELAASQNITQIVEIL--DDPRSK-ERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVE 434 Query: 560 SSL--KLEILTVN-DGSQGS 610 +L K ++ ++ D SQG+ Sbjct: 435 GTLARKYNVVGIHGDMSQGA 454
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 53.1 bits (126), Expect = 8e-07 Identities = 41/164 (25%), Positives = 77/164 (46%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G I I G++ C I+TP RLL+++ ++ V+ LV+D +D+ ++ Sbjct: 236 GPQIRDLIRGVEIC-----IATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQI 290 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCT 439 R I I D Q +FS + +AR+ L+ I ++T + S + Q V Sbjct: 291 RKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYI-QVTVGSLDLAASHNIKQIVEVVD 349 Query: 440 KEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 +K +++ + +E VL++ + KVL+ VA ++ L+ Sbjct: 350 NADKRARLGKDIEEVLKD---RDNKVLIFTGTKRVADDITRFLR 390
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 53.1 bits (126), Expect = 8e-07 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 1/177 (0%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 ++ G+ S ++ G + Q L+ + +++TP RLL+L+ ++D+S+V+ LV+D Sbjct: 188 DACGLRSCCVYGGVPKDQQREDLR--RSQVVVATPGRLLDLIEEGSVDLSHVNYLVLDEA 245 Query: 224 KGFMDLNIIKELRS-IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 ++ ++++ IR T S Q +F+ + +A + + + N S Sbjct: 246 DRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEPVKVSIGNRDELS 305 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 + +TQ V K K+ E+L+ + +K KVL+ A A ++ +LK Sbjct: 306 ANKRITQIVEVVDPFRKEKKLLELLKK-YHSGPTKNDKVLIFALYKKEASRVERNLK 361
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 53.1 bits (126), Expect = 8e-07 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSL---KAIDISNVSMLV 211 ++SL + V ++ G I QI+ LK E ++ TP R+++++ + ++ V+ +V Sbjct: 437 SKSLALRVVCVYGGTGISEQIAELKR-GAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVV 495 Query: 212 IDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDS 391 ID D+ ++ I + D Q +FS ++ +AR +L + S Sbjct: 496 IDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRS 555 Query: 392 VASRSAFVTQHVHFCTKEEKTSKVKEILEHVLE 490 V V QHV +E+K K+ EIL H E Sbjct: 556 VVCSD--VEQHVIVIEEEKKFLKLLEILGHYQE 586
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 52.8 bits (125), Expect = 1e-06 Identities = 27/113 (23%), Positives = 60/113 (53%) Frame = +2 Query: 17 ASAFNV*TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN 196 A AF+ + + +G+H ++L+ G + Q+ L+ P+ ++ TP RLL+ + + + +SN Sbjct: 91 AEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRK-GPQIIVGTPGRLLDHLKRRTLSLSN 149 Query: 197 VSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + LV+D + + I+++ +I I Q +FS ++ ++R + Sbjct: 150 LHSLVLDEADEMLRMGFIEDVETIMTEIPDRHQTALFSATMPEAIRRISRRFM 202
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 52.8 bits (125), Expect = 1e-06 Identities = 38/167 (22%), Positives = 70/167 (41%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLK 226 S G+ S++ G+SIE QI LKS ++ TP RLL+L+ KA+ + ++ L++D Sbjct: 95 SKGVKVRSVYGGSSIEKQIKALKS-GAHIVVGTPGRLLDLIKRKALKLQDIETLILDEAD 153 Query: 227 GFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +++ ++++ +I + + Q +FS + + + Sbjct: 154 EMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMK---------------- 197 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVA 547 +HV KE T V + V E T L+ A +A Sbjct: 198 --APEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPELA 242
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 52.8 bits (125), Expect = 1e-06 Identities = 38/167 (22%), Positives = 70/167 (41%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLK 226 S G+ S++ G+SIE QI LKS ++ TP RLL+L+ KA+ + ++ L++D Sbjct: 95 SKGVKVRSVYGGSSIEKQIKALKS-GAHIVVGTPGRLLDLIKRKALKLQDIETLILDEAD 153 Query: 227 GFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +++ ++++ +I + + Q +FS + + + Sbjct: 154 EMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMK---------------- 197 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVA 547 +HV KE T V + V E T L+ A +A Sbjct: 198 --APEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPELA 242
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 52.4 bits (124), Expect = 1e-06 Identities = 39/175 (22%), Positives = 86/175 (49%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G+ S+ ++ G + QI + S + +I+TP RL +L ++++ +++ LVID Sbjct: 323 GLKSICIYGGRNRNGQIEDI-SKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKM 381 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAF 412 +D+ ++R I + D Q + S + +A + L + N ++ + + Sbjct: 382 LDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNT- 440 Query: 413 VTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 V Q++ T++EK + +E +E++ N KV++ + ++A LSS ++ Sbjct: 441 VKQNIIVTTEKEKRALTQEFVENMSPND-----KVIMFVSQKHIADDLSSDFNIQ 490
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 52.0 bits (123), Expect = 2e-06 Identities = 41/174 (23%), Positives = 81/174 (46%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 I + ++ GA QI L E I+TP RL++++ ++ V+ LV+D + Sbjct: 207 IRNTCVYGGAPKGQQIRDLAR-GVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRML 265 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + + R+ L+ I ++T + S + Sbjct: 266 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQALTRDYLNDPI-QVTVGSLELAASHTI 324 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 TQ V T+ EK + +++H+ A AK L+ A+ ++++ L+ + Sbjct: 325 TQLVEVVTEFEKRDR---LIKHLETATADPEAKCLIFASTKRTCDEITNYLRAD 375
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 52.0 bits (123), Expect = 2e-06 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 1/174 (0%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 +G+H+V ++ G E Q S LK F+I+TP RL +L+ + D+S VS LV+D Sbjct: 221 VGLHAVCVYGGVPKEQQRSDLKRAS--FVIATPGRLCDLIDEGSCDLSKVSYLVLDEADR 278 Query: 230 FMDLNIIKELRSIRG-TISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++ ++++ I G T Q +FS +A + + + + Sbjct: 279 MLEKGFEEDIKKIIGSTRPTGRQTVMFSATWPPEVRKLAEGFMKTPTKVMIGERDELAAN 338 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +TQ V K ++ ++ L +A+ K+L+ A A ++ ++L Sbjct: 339 KRITQSVEVLDPRAKEGRLLDL----LRQYANDDFKILIFALYKKEATRVENTL 388
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 51.2 bits (121), Expect = 3e-06 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 3/184 (1%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNV---SMLVIDG 220 L I + + GA I+ QI+ LK E ++ TP R+++++S A ++N+ + LV+D Sbjct: 518 LNIRACCAYGGAPIKDQIADLKR-GAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDE 576 Query: 221 LKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 DL ++ I I D Q +FS ++ +AR +L + SV + Sbjct: 577 ADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVA 636 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEI 580 V Q V +E K S++ E+L + N + L+ A L S L Sbjct: 637 SE--VEQIVEVRPEESKFSRLLELLGELYNNQLD--VRTLVFVDRQESADALLSDLMKRG 692 Query: 581 LTVN 592 T N Sbjct: 693 YTSN 696
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 51.2 bits (121), Expect = 3e-06 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 9/172 (5%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSL---KAIDISNVSMLVIDGLKGFMDLNII 250 G+SIE+QI+ LK E ++ TP R+++L++ + +++ + +V+D DL Sbjct: 405 GSSIENQINELKK-GVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFE 463 Query: 251 KELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVH 430 ++ I I D Q +FS + T+A+ +L + + SV + + V Sbjct: 464 PQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVA-PEIKQEVVL 522 Query: 431 FCTKEEKTSKVK----EILEHVLENHASK--TAKVLLVAANDNVAQKLSSSL 568 F T E+ K K E L +L N+ + +K+L+ N A +L ++L Sbjct: 523 FETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANL 574
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 50.8 bits (120), Expect = 4e-06 Identities = 28/113 (24%), Positives = 59/113 (52%) Frame = +2 Query: 17 ASAFNV*TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN 196 A AF+ + +GIH + L+ G E Q+ L+ P+ ++ TP RLL+ + +++SN Sbjct: 91 AEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLNLSN 149 Query: 197 VSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + LV+D + + I+++ +I I + Q +FS ++ +++ + Sbjct: 150 LYALVLDEADEMLRMGFIEDVETIMSQIPKEHQTALFSATMPEAIRRISKRFM 202
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 50.8 bits (120), Expect = 4e-06 Identities = 28/113 (24%), Positives = 59/113 (52%) Frame = +2 Query: 17 ASAFNV*TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN 196 A AF+ + +GIH + L+ G E Q+ L+ P+ ++ TP RLL+ + +++SN Sbjct: 91 AEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQ-GPQIVVGTPGRLLDHLKRGTLNLSN 149 Query: 197 VSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + LV+D + + I+++ +I I + Q +FS ++ +++ + Sbjct: 150 LHGLVLDEADEMLRMGFIEDVETIMAQIPKEHQTALFSATMPEAIRRISKRFM 202
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 50.4 bits (119), Expect = 5e-06 Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 1/177 (0%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 + +G+ ++ G + Q LK + + +++TP RLL+L+ ++D+S V+ LV+D Sbjct: 207 DKVGMQCCCVYGGVPKDEQRIQLK--KSQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEA 264 Query: 224 KGFMDLNIIKELRS-IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 ++ +++++ IR T + Q +F+ + +A ++ I N + Sbjct: 265 DRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLT 324 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 + +TQ V K K+ E+L+ + K KVL+ A A ++ +LK Sbjct: 325 ANKRITQIVEVVDPRGKERKLLELLKK-YHSGPKKNEKVLIFALYKKEAARVERNLK 380
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 50.4 bits (119), Expect = 5e-06 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E I+TP RL++++ ++ V+ LV+D +D+ ++R I G I D Q ++ Sbjct: 257 EVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMW 316 Query: 308 SGQCDQSAATVARNLLHGRI-TKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHV 484 S + +A + L I + + D A+ +TQ V ++ EK ++ + LE + Sbjct: 317 SATWPKEVRNLAADFLTDFIQVNIGSMDLAANHR--ITQIVEVVSESEKRDRMIKHLEKI 374 Query: 485 LENHASKTAKVLLVAANDNVAQKLSSSLK 571 +E ++ K+L+ VA ++ L+ Sbjct: 375 MEGRENQN-KILIFTGTKRVADDITRFLR 402
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 50.4 bits (119), Expect = 5e-06 Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 1/149 (0%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E +I+TP RL++++ ++ V+ LV+D +D+ ++R I I D Q ++ Sbjct: 235 EIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 294 Query: 308 SGQCDQSAATVARNLLHGRI-TKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHV 484 S + +AR+ L+ I ++ + + AS + +TQ V ++ EK + +++H+ Sbjct: 295 SATWPKEVQQLARDYLNDPIQVQIGSLELAASHN--ITQLVEVVSEFEKRDR---LVKHL 349 Query: 485 LENHASKTAKVLLVAANDNVAQKLSSSLK 571 K +K+L+ A+ +++S L+ Sbjct: 350 DTASQDKESKILIFASTKRTCDEITSYLR 378
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 50.4 bits (119), Expect = 5e-06 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEP-EFLISTPERLLELVSLKAIDISNVSMLVIDG 220 +S+GI + L+ G S + Q+ L P ++ TP R+L++ ++D+S V+ LV+D Sbjct: 264 KSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDE 323 Query: 221 LKGFMDLNIIKELRSIRGTISGDAQ---VTIFSGQCDQSAATVARNLLHGRITKLTTNDS 391 +D ++R+I G + ++FS + +A + ++G + ++T Sbjct: 324 ADRMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMNGPV-RVTVGSD 382 Query: 392 VASRSAFVTQHVH-FCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 S + V Q V K ++ + L V N K+L+ A AQ++ +L Sbjct: 383 ELSANRRVEQTVEVLADGYAKERRLNDFLRSV--NAQRSKDKILIFALYKKEAQRIEQTL 440 Query: 569 K 571 + Sbjct: 441 R 441
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 50.1 bits (118), Expect = 7e-06 Identities = 37/172 (21%), Positives = 81/172 (47%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 I + ++ G QI L+ E LI+TP RL++++ + ++ V+ LV+D + Sbjct: 216 IRNTCVYGGVPKSQQIRDLQR-GVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML 274 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +AR+ LH I ++ + S + Sbjct: 275 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPI-QVNIGSLELAASHTI 333 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 TQ + +K + +++H+ K +K++++ + +++S L+ Sbjct: 334 TQLGEVVSDFDKRDR---LVKHLEIGSKDKDSKIIILHSTKRTCDEITSYLR 382
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 50.1 bits (118), Expect = 7e-06 Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 13/236 (5%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 E +G+ SV + G + Q L + ++ TP R L+L +D+S+VS LV+D Sbjct: 279 EQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLDEA 338 Query: 224 KGFMDLNIIKELRSIRGTISG---DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 +D ++R I G Q +FS +S +A L+ + ++T Sbjct: 339 DRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFLNNPL-RITVGSDE 397 Query: 395 ASRSAFVTQHVHFC-TKEEKTSKVKEILEHVLENHA-SKTA--KVLLVAANDNVAQKLSS 562 S + + Q V +K ++ L+ L+ H SKT+ ++L+ A AQ+L Sbjct: 398 LSANKRIEQIVEVLDNPRDKDFRLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLEY 457 Query: 563 SLKLEILTV----NDGSQGSTFTVCSSM--GLINVLVKGCESLATSGVEEFEIVLV 712 +++ V D +Q + F + G NVLV +A G++ ++ LV Sbjct: 458 TIRRAGYAVGALHGDMTQEARFKALEAFKTGQQNVLV--ATDVAARGLDIPDVGLV 511
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 50.1 bits (118), Expect = 7e-06 Identities = 35/148 (23%), Positives = 71/148 (47%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E I+TP RL++++ ++ V+ LV+D +D+ ++R I I D Q ++ Sbjct: 246 EVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMW 305 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L+ I ++ S + +TQ V + EK K+ + LE ++ Sbjct: 306 SATWPKEVRQLATDFLNDYI-QVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIM 364 Query: 488 ENHASKTAKVLLVAANDNVAQKLSSSLK 571 EN ++ K L+ +A +++ L+ Sbjct: 365 ENRSN---KCLIFTGTKRIADEITRFLR 389
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 49.7 bits (117), Expect = 9e-06 Identities = 35/148 (23%), Positives = 70/148 (47%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E I+TP RL++++ ++ V+ LV+D +D+ ++R I I D Q ++ Sbjct: 255 EVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMW 314 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L+ I ++ S + +TQ V + EK K+ + LE ++ Sbjct: 315 SATWPKEVRQLASDFLNDYI-QVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIM 373 Query: 488 ENHASKTAKVLLVAANDNVAQKLSSSLK 571 EN + K L+ +A +++ L+ Sbjct: 374 ENRGN---KCLIFTGTKRIADEITRFLR 398
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 49.7 bits (117), Expect = 9e-06 Identities = 37/175 (21%), Positives = 78/175 (44%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 +S I L+ GA Q+ L S + +++TP RL +++ ++ + + VS LV+D Sbjct: 242 KSSRISCTCLYGGAPKGPQLREL-SRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEA 300 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASR 403 +D+ ++R I + Q +++ + +A +LL + N Sbjct: 301 DRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVA 360 Query: 404 SAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 + +TQH+ EK +V++IL +K+++ + + +LS +L Sbjct: 361 NKSITQHIEVVLPMEKQRRVEQIL-----RSKEPGSKIIIFCSTKKMCDQLSRNL 410
>Y425_MYCGE (P47664) Probable ATP-dependent RNA helicase MG425 (EC 3.6.1.-)| Length = 449 Score = 49.3 bits (116), Expect = 1e-05 Identities = 35/157 (22%), Positives = 76/157 (48%), Gaps = 12/157 (7%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDG 220 A++ + +SL G QI +K+ P+ ++ T R+++L+ KAI S++ L+ID Sbjct: 96 AKNKKLRIISLIGGVPAWKQIKKIKT-NPQIIVGTMGRIMDLLERKAIHFSDLEHLIIDE 154 Query: 221 LKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRI---TKLTTNDS 391 + +D K++ ++ I+ Q+ ++S +Q A +A+ + + I + D+ Sbjct: 155 VDLMLDRGFKKQIFNLLEQINSFKQIAVYSASYNQEAINIAKQITNNGIFIGSPEFNKDA 214 Query: 392 VASRSAFVTQHVHFCTKEE---------KTSKVKEIL 475 + + Q V + ++ KT++VK I+ Sbjct: 215 NTNNDKLIKQFVCYLFSDQKKQALYSLIKTAQVKSII 251
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 49.3 bits (116), Expect = 1e-05 Identities = 34/148 (22%), Positives = 71/148 (47%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E I+TP RL++++ ++ V+ LV+D +D+ ++R I I D Q ++ Sbjct: 265 EVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMW 324 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L+ I ++ S + +TQ V ++ EK ++ + LE ++ Sbjct: 325 SATWPKEVRQLASDFLNNYI-QVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIM 383 Query: 488 ENHASKTAKVLLVAANDNVAQKLSSSLK 571 EN + K L+ +A +++ L+ Sbjct: 384 ENRGN---KCLVFTGTKRIADEITRFLR 408
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 49.3 bits (116), Expect = 1e-05 Identities = 40/172 (23%), Positives = 80/172 (46%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 I + ++ G QI L S E +I+TP RL++++ + ++ V+ LV+D + Sbjct: 215 IRNTCVYGGVPKSQQIRDL-SRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML 273 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + L+ I ++ S S + Sbjct: 274 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPI-QVQVGSLELSASHNI 332 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 TQ V + EK ++ + LE +++ KT L+ A+ + ++ L+ Sbjct: 333 TQIVEVVSDFEKRDRLNKYLETASQDNEYKT---LIFASTKRMCDDITKYLR 381
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 48.9 bits (115), Expect = 2e-05 Identities = 35/151 (23%), Positives = 69/151 (45%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + S ++ GA QI L+ E I+TP RL++ + ++ + LV+D + Sbjct: 194 LKSTCIYGGAPKGPQIRDLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRML 252 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + L T++ + S + + Sbjct: 253 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRD-YTQINVGNLELSANHNI 311 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKT 508 Q V C + EK K+ +++E ++ +KT Sbjct: 312 LQIVDVCMESEKDHKLIQLMEEIMAEKENKT 342
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 48.9 bits (115), Expect = 2e-05 Identities = 35/151 (23%), Positives = 69/151 (45%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + S ++ GA QI L+ E I+TP RL++ + ++ + LV+D + Sbjct: 194 LKSTCIYGGAPKGPQIRDLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRML 252 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + L T++ + S + + Sbjct: 253 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRD-YTQINVGNLELSANHNI 311 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKT 508 Q V C + EK K+ +++E ++ +KT Sbjct: 312 LQIVDVCMESEKDHKLIQLMEEIMAEKENKT 342
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 48.5 bits (114), Expect = 2e-05 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%) Frame = +2 Query: 71 LHPGASIEHQISGLK-SCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I +Q+ + C+ L++TP RL +L+ + +SNV LV+D +D+ Sbjct: 262 VYGGAPIGNQMREMDHGCD--LLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGF 319 Query: 248 IKELRSIRGTI----SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I +G+ Q +FS +AR+ LH I + V S S + Sbjct: 320 EPQIRHIVEDCDMPPTGERQTLMFSATFPHDIQHLARDFLHDYI--FLSVGRVGSTSENI 377 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 TQ + + +K S + ++L AS L+ +A +L+ L ++ Sbjct: 378 TQRILYVENRDKNSALLDLLA------ASNDNLTLIFVETKRMADQLTDFLIMQ 425
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 48.1 bits (113), Expect = 3e-05 Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 1/177 (0%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 + +G++ ++ G + Q LK + +++TP RLL+L+ + ++ V LV+D Sbjct: 219 DKVGLNCCCVYGGVQKDSQREQLKKAQ--VVVATPGRLLDLIEEGSAKLAGVQYLVLDEA 276 Query: 224 KGFMDLNIIKEL-RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 ++ +++ R I+ T S Q +F+ + +A + + N S Sbjct: 277 DRMLEKGFEEDIKRIIKETKSDVRQTLMFTATWPKEVRELASTFMRAPVKVSIGNRDELS 336 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 + +TQ V +K ++ E+L+ ++ A K KVL+ A A ++ +LK Sbjct: 337 ANKRITQVVEVIDPFKKEKRLLELLKQ-YQSGAKKNDKVLIFALYKKEASRVERNLK 392
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 47.8 bits (112), Expect = 3e-05 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 8/174 (4%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I Q+ + + C+ L++TP RL++L+ I + N+ LV+D +D+ Sbjct: 305 VYGGADIGSQLRQIERGCD--LLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGF 362 Query: 248 IKELRSIRGTISG-------DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++R I + G D Q +FS + +AR+ L I + V S S Sbjct: 363 EPQIRRI---VEGEDMPQVQDRQTLMFSATFPRDIQMLARDFLKDYI--FLSVGRVGSTS 417 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +TQ V + +K S + +IL H+ L+ +A LS L Sbjct: 418 ENITQKVEYVEDVDKRSVLLDIL------HSHANGLTLIFVETKRMADSLSDFL 465
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/139 (22%), Positives = 61/139 (43%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 E +I+TP RL++ +S + ++ + LV+D +D+ ++R I I D Q ++ Sbjct: 406 EIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMW 465 Query: 308 SGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 S + +A + L G ++ S + + Q V C + K K+K +L + Sbjct: 466 SATWPKEVKQLAEDFL-GNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIY 524 Query: 488 ENHASKTAKVLLVAANDNV 544 + S ++ V V Sbjct: 525 DTSESPGKIIIFVETKRRV 543
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 47.4 bits (111), Expect = 4e-05 Identities = 41/176 (23%), Positives = 80/176 (45%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 +S I + ++ GA QI L E I+TP RL++++ ++ V+ LV+D Sbjct: 225 KSSRIRNTCVYGGAPKGPQIRDLAR-GVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEA 283 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASR 403 +D+ ++R I I D Q ++S + + R+ L+ I ++T + Sbjct: 284 DRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPI-QVTIGSLELAA 342 Query: 404 SAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLK 571 S +TQ V + K ++ + LE L K K+L+ A+ ++++ L+ Sbjct: 343 SHTITQLVEVIDEFSKRDRLVKHLESALN---EKDNKILVFASTKRTCDEITTYLR 395
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 47.4 bits (111), Expect = 4e-05 Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 17/233 (7%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSMLVI 214 + L I S G+SIE QI+ LK + ++ TP R+++L++ + ++N V+ LV+ Sbjct: 415 KKLNISSCCCFGGSSIESQIAELKK-GAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVL 473 Query: 215 DGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 D D+ ++ + + D Q +FS + +A+ +L + + SV Sbjct: 474 DEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISV 533 Query: 395 ASRSAFVTQHVHFCTKEEKTS----KVKEILEHVLENHASKTA--KVLLVAANDNVAQKL 556 + +TQ V E+ S K ++L L ++ K A K+L+ A +L Sbjct: 534 VASE--ITQKVELFENEDDKSLEEAKFSKLLS-TLNDYGDKDAECKILIFVEKQIAADEL 590 Query: 557 SSSL---KLEILTVNDGS-----QGSTFTVCSSMGLINVLVKGCESLATSGVE 691 L K L ++ G + + SS +N+L+ S+A G++ Sbjct: 591 LVKLLTEKYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILI--ATSIAARGLD 641
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 47.4 bits (111), Expect = 4e-05 Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 18/195 (9%) Frame = +2 Query: 38 TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSL---KAIDISNVSML 208 T I SV G+ ++ QI+ LK E +++TP R +++++L K + ++ + Sbjct: 354 TEADTSIRSVCCTGGSEMKKQITDLKR-GTEIVVATPGRFIDILTLNDGKLLSTKRITFV 412 Query: 209 VIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTND 388 V+D DL ++ I T+ D Q +FS + A +LH I+ + Sbjct: 413 VMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSK 472 Query: 389 SVASRSAFVTQHVHFC-TKEEKTSKVKEIL--------EHVLENHASKT------AKVLL 523 + + + V Q C +++EK + +++ E EN + AK ++ Sbjct: 473 GMVNEN--VKQKFRICHSEDEKFDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAII 530 Query: 524 VAANDNVAQKLSSSL 568 ++ N+ +S L Sbjct: 531 FVSSQNICDFISKKL 545
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 47.0 bits (110), Expect = 6e-05 Identities = 25/101 (24%), Positives = 52/101 (51%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ V+L+ G + Q+ L+ P+ ++ TP RLL+ + +D+S +S LV+D Sbjct: 102 GVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + + I+++ +I I Q +FS ++ + R + Sbjct: 161 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFM 201
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 47.0 bits (110), Expect = 6e-05 Identities = 25/101 (24%), Positives = 52/101 (51%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ V+L+ G + Q+ L+ P+ ++ TP RLL+ + +D+S +S LV+D Sbjct: 102 GVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + + I+++ +I I Q +FS ++ + R + Sbjct: 161 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFM 201
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 47.0 bits (110), Expect = 6e-05 Identities = 25/101 (24%), Positives = 52/101 (51%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ V+L+ G + Q+ L+ P+ ++ TP RLL+ + +D+S +S LV+D Sbjct: 102 GVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + + I+++ +I I Q +FS ++ + R + Sbjct: 161 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFM 201
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 47.0 bits (110), Expect = 6e-05 Identities = 25/101 (24%), Positives = 52/101 (51%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ V+L+ G + Q+ L+ P+ ++ TP RLL+ + +D+S +S LV+D Sbjct: 102 GVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + + I+++ +I I Q +FS ++ + R + Sbjct: 161 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFM 201
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 47.0 bits (110), Expect = 6e-05 Identities = 25/101 (24%), Positives = 52/101 (51%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ V+L+ G + Q+ L+ P+ ++ TP RLL+ + +D+S +S LV+D Sbjct: 102 GVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 + + I+++ +I I Q +FS ++ + R + Sbjct: 161 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFM 201
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 46.6 bits (109), Expect = 8e-05 Identities = 34/169 (20%), Positives = 83/169 (49%), Gaps = 1/169 (0%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLN 244 V+++ G S Q+S L++ +++TP RL++L++ A+ + ++ LV+D ++ Sbjct: 218 VAVYGGVSKHEQVSSLRNAS--VVVATPGRLIDLLNDGALSLDSIEYLVLDEADRMLEKG 275 Query: 245 IIKELRSI-RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQ 421 ++++S+ + T + Q +F+ + +A ++ + + + S + +TQ Sbjct: 276 FEQDIKSVMQQTNHANRQTLMFTATWPKEVRELASTFMNSPVKVSIGDRNELSANKRITQ 335 Query: 422 HVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 V +K K+ +L ++ ++K KVL+ A A ++ + L Sbjct: 336 IVEVIEPYDKEKKLLSLLRK-YQSGSNKDDKVLIFALYKKEATRIENLL 383
>SUB2_KLULA (Q6CM95) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 437 Score = 46.6 bits (109), Expect = 8e-05 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 1/161 (0%) Frame = +2 Query: 113 KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL-KGFMDLNIIKELRSIRGTISGD 289 K P +++TP RL LV K ID+S+V VID K +L++ ++++ I D Sbjct: 172 KETVPHIIVATPGRLKALVRDKHIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRD 231 Query: 290 AQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKE 469 QV +FS Q + R L + ++ +D + Q+ ++EK K+ + Sbjct: 232 KQVMMFSATLSQEIRPICRRFLQNPL-EIFVDDEAKLTLHGLQQYYIKLNEKEKNRKLAQ 290 Query: 470 ILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVN 592 +L+ + N K + A N KL ++ +TV+ Sbjct: 291 LLDDLEFNQVIIFVKSTVRA---NELTKLLNASNFPAITVH 328
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 46.6 bits (109), Expect = 8e-05 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I Q+ L + C+ L +TP RL++L+ I ++NV LV+D +D+ Sbjct: 281 VYGGADIGSQMRALDRGCD--LLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGF 338 Query: 248 IKELRSI--RGTISG--DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + G + Q +FS + +AR+ L I T V S S + Sbjct: 339 EPQIRRIVDEEDMPGVLERQTLMFSATFPREIQNLARSFLKEYI--FLTVGRVGSTSENI 396 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + ++K S + ++L Sbjct: 397 TQRVEYVDDQDKRSLLLDLL 416
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 46.6 bits (109), Expect = 8e-05 Identities = 48/231 (20%), Positives = 104/231 (45%), Gaps = 10/231 (4%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSL---KAIDISNVSMLVIDG 220 +G+ +V + GA I QI+ LK E ++ TP R+++L++ + ++ V+ +V+D Sbjct: 697 MGLRAVCAYGGAPIREQIAELKR-GAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDE 755 Query: 221 LKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 D+ ++ I + D Q +FS + ++ + +L I SV + Sbjct: 756 ADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVA 815 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE- 577 + + Q V + K +V E+L + + + A+ L+ A L L ++ Sbjct: 816 KE--IEQIVEVRDEPSKFHRVLELLGELYDR--DEDARTLIFVERQEKADDLLKELMMKG 871 Query: 578 --ILTVNDG----SQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVLV 712 ++++ G + ST + G++ +L+ S+A G++ ++ LV Sbjct: 872 YPCMSIHGGKDQIDRDSTISDFKK-GVVPILI--ATSVAARGLDVKQLKLV 919
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 46.2 bits (108), Expect = 1e-04 Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRG-TISGDAQVTIFS 310 +++TP RLL+L+ ++D+S V +V+D ++ ++++ I G T S D Q +F+ Sbjct: 252 VVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFEEDIKRIIGQTKSKDRQTLMFT 311 Query: 311 GQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLE 490 + +A + + N S + +TQ V K K+ ++L+ + Sbjct: 312 ATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLKK-YQ 370 Query: 491 NHASKTAKVLLVAANDNVAQKLSSSL 568 + K KVL+ A A ++ +L Sbjct: 371 SGPKKNDKVLIFALYKKEASRVERNL 396
>SUB2_ASPOR (Q2U6P7) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 441 Score = 45.8 bits (107), Expect = 1e-04 Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 3/184 (1%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCE--PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + + + G I+ + L + E P ++ TP RL LV K + + NV V+D Sbjct: 156 VKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDK 215 Query: 230 FMD-LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +D +++ ++++ I D QV +FS Q V + + + +D+ + Sbjct: 216 MLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEIRPVCKKFMRNPLEVYVDDDTKLTLH 275 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILT 586 ++ ++ EK K+ E+L+ + N K L A N KL + Sbjct: 276 GLQQYYIKL-SEAEKNRKLNELLDSLEFNQVIIFVKSTLRA---NELDKLLRECNFPSIA 331 Query: 587 VNDG 598 V+ G Sbjct: 332 VHSG 335
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 45.8 bits (107), Expect = 1e-04 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I Q+ + + C+ L++TP RL++L+ I + N+ LV+D +D+ Sbjct: 313 VYGGADIGSQLRQIERGCD--LLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGF 370 Query: 248 IKELRSIRGTISG-------DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++R I + G D Q +FS + +AR+ L I + V S S Sbjct: 371 EPQIRRI---VEGEDMPKVNDRQTLMFSATFPRDIQILARDFLKDYI--FLSVGRVGSTS 425 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +TQ V + +K S + +IL H L+ +A LS L Sbjct: 426 ENITQKVEYVEDIDKRSVLLDIL------HTHAGGLTLIFVETKRMADSLSDFL 473
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 45.8 bits (107), Expect = 1e-04 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ G+ I +Q+ + + C+ L++TP RL +L+ I ++NV LV+D +D+ Sbjct: 259 VYGGSPIGNQLREIERGCD--LLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGF 316 Query: 248 IKELRSI----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I T G+ Q +FS +AR+ L I + V S S + Sbjct: 317 EPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYI--FLSVGRVGSTSENI 374 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 TQ V + ++K S + ++L AS L+ +A +L+ L ++ Sbjct: 375 TQKVLYVENQDKKSALLDLLS------ASTDGLTLIFVETKRMADQLTDFLIMQ 422
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 45.4 bits (106), Expect = 2e-04 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 2/147 (1%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + SV L G S+E Q S L + P+ +I+TP R L L +D+S++ +V D Sbjct: 188 LKSVLLVGGDSLEEQFS-LMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLF 246 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVAR-NLLHGRITKLTTNDSVASRSAF 412 ++ +L I + + Q +FS +S AR L + +L T ++ Sbjct: 247 EMGFADQLTEILYGLPANRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPD--- 303 Query: 413 VTQHVHFCTK-EEKTSKVKEILEHVLE 490 ++V F K EK + IL V++ Sbjct: 304 -LENVFFSVKSSEKEGALLHILHEVIK 329
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 45.4 bits (106), Expect = 2e-04 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Frame = +2 Query: 113 KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL-KGFMDLNIIKELRSIRGTISGD 289 K P +++TP RL LV K ID+S+V VID K +L++ ++++ I D Sbjct: 181 KDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRD 240 Query: 290 AQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKE 469 QV +FS Q + R L + ++ +D + Q+ + EK K+ + Sbjct: 241 KQVMMFSATLSQEIRPICRRFLQNPL-EIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQ 299 Query: 470 ILE 478 +L+ Sbjct: 300 LLD 302
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 45.4 bits (106), Expect = 2e-04 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Frame = +2 Query: 113 KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL-KGFMDLNIIKELRSIRGTISGD 289 K P +++TP RL LV K ID+S+V VID K +L++ ++++ I D Sbjct: 174 KDTAPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRD 233 Query: 290 AQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKE 469 QV +FS Q + R L + ++ +D + Q+ + EK K+ + Sbjct: 234 KQVMMFSATLSQEIRPICRRFLQNPL-EIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQ 292 Query: 470 ILE 478 +L+ Sbjct: 293 LLD 295
>SPB4_CANGA (Q6FKS8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 617 Score = 45.1 bits (105), Expect = 2e-04 Identities = 26/133 (19%), Positives = 57/133 (42%) Frame = +2 Query: 86 SIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRS 265 S+ ++ L P+ LI TP R+L+ + ++ S+ M+V+D +D++ K++ Sbjct: 129 SVRDDVNTLLDERPQILIGTPGRVLDFLQSPSVKTSSCGMVVLDEADRLLDVSFFKDVEK 188 Query: 266 IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKE 445 I + + +FS + + + L + K+T N + + E Sbjct: 189 ILNVLPKQRRTGLFSATISSAGTLIFKTGLRNPV-KITVNSQGKNAPTTLNLFYSVMKPE 247 Query: 446 EKTSKVKEILEHV 484 EK + I+ ++ Sbjct: 248 EKLQNLIHIMNNI 260
>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 438 Score = 45.1 bits (105), Expect = 2e-04 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 1/161 (0%) Frame = +2 Query: 113 KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL-KGFMDLNIIKELRSIRGTISGD 289 K P +++TP RL LV ID+S+V VID K +L++ ++++ I D Sbjct: 173 KDTAPHIVVATPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRD 232 Query: 290 AQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKE 469 QV +FS Q + R L + ++ +D + Q+ + EK K+ + Sbjct: 233 KQVMMFSATLSQEIRPICRRFLQNPL-EIFVDDEAKLTLHGLQQYYIRLEEREKNRKLAQ 291 Query: 470 ILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVN 592 +L+ + N K L A N KL ++ +TV+ Sbjct: 292 LLDDLEFNQVIIFVKSTLRA---NELTKLLNASNFPAITVH 329
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 45.1 bits (105), Expect = 2e-04 Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 3/163 (1%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSL---KAIDISNVSMLVID 217 +L + +V + G+ I+ QI+ LK ++ TP R+++L++ + + +S V+ LVID Sbjct: 485 ALELTAVCAYGGSPIKDQIAALKK-GTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVID 543 Query: 218 GLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVA 397 D+ ++ + +I D Q +FS + +AR +L R ++DS+ Sbjct: 544 EADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLARRVLSKR-----SSDSLG 598 Query: 398 SRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLV 526 V + S++ + +E V +N SK ++L V Sbjct: 599 PIEIIVG------ARSVVASEITQFVE-VFQNEKSKFPRLLEV 634
>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 565 Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/135 (22%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 GA + +++ K + +ISTP RL+++V +A+D+SNV L+ D D I++ Sbjct: 239 GAKLRNKVISDKKYD--LIISTPLRLIDVVKNEALDLSNVKHLIFDEADKLFDKTFIEQT 296 Query: 260 RSIRGTISGDA-QVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 I + + + + ++FS S A ++++ + + + A+ + + Q + FC Sbjct: 297 DDILNSCTDPSMRKSMFSATIPSSVEETANSIMNDPVRVIIGHKEAANTN--IEQKLIFC 354 Query: 437 TKEE-KTSKVKEILE 478 EE K ++++++ Sbjct: 355 GNEEGKLIAIRQLVQ 369
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 44.7 bits (104), Expect = 3e-04 Identities = 32/146 (21%), Positives = 66/146 (45%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 L++TP RL++ + +K I++ V+ LV+D +D+ ++R I G I D Q +FS Sbjct: 228 LVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSA 287 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLEN 493 + +A I +++ + + VTQ + K +++++++ E Sbjct: 288 TWPREIQRLAAEFQKQWI-RISVGSTELQANKDVTQRFILTQEFAKQDELRKLMQEHREE 346 Query: 494 HASKTAKVLLVAANDNVAQKLSSSLK 571 +VL+ A +L L+ Sbjct: 347 ------RVLVFCKMKRTADELERQLR 366
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 3/148 (2%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNV---SMLV 211 A++L + V+ + G +I+ QI+ LK E +++TP RL++L++ ++N+ + LV Sbjct: 658 AKALKLRVVAAYGGNAIKDQIAELKR-GAEIIVATPGRLIDLLAANGGRVTNLKRATYLV 716 Query: 212 IDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDS 391 +D D+ ++ I + D Q +FS + + + +L + S Sbjct: 717 LDEADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLRDPVEITVGGRS 776 Query: 392 VASRSAFVTQHVHFCTKEEKTSKVKEIL 475 V + +TQ V + +K +++ E+L Sbjct: 777 VVAPE--ITQIVEVMDEGKKFNRLLELL 802
>PRP5_ASHGO (Q754U8) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 44.3 bits (103), Expect = 4e-04 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 4/198 (2%) Frame = +2 Query: 38 TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN---VSML 208 T+ I S+ G+ ++ QI+ +K E +I+TP R ++L+SL + ++ N + + Sbjct: 335 TSGDPSIRSLCCTGGSELKRQINDIKR-GVEIVIATPGRFIDLLSLNSGNLINPKRIVFV 393 Query: 209 VIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTND 388 V+D DL ++ I I D Q +FS + A +LH + + Sbjct: 394 VMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYITVNSK 453 Query: 389 SVASRSAFVTQHVHFCTKEEKTSKVKEILEHV-LENHASKTAKVLLVAANDNVAQKLSSS 565 S+ + + + Q V + EE K K ++ + L K ++ ++ + L + Sbjct: 454 SLINEN--IEQKVEIFSNEE--DKFKSLIHWLALTQQNLNDEKTIVFVSSQQICDILYNR 509 Query: 566 LKLEILTVNDGSQGSTFT 619 L+ T G +T Sbjct: 510 LEANGFTTFAIHAGKIYT 527
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 5/145 (3%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + + ++ GA I Q+ + + C+ L++TP RL +L+ + ++N+ LV+D Sbjct: 298 VRACVVYGGADIGQQMRNMDRGCD--LLVATPGRLKDLLDRGKVSLANIRYLVLDEADRM 355 Query: 233 MDLNIIKELRSIRGTIS----GDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 +D+ ++R I D Q +FS + +AR+ L + + V S Sbjct: 356 LDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYV--FLSVGRVGS 413 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEIL 475 S +TQ + + +EK S + ++L Sbjct: 414 TSENITQKILYVEDDEKKSVILDLL 438
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 44.3 bits (103), Expect = 4e-04 Identities = 35/151 (23%), Positives = 65/151 (43%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + S ++ GA QI L+ E I+TP RL++ + ++ + LV+D + Sbjct: 196 LKSTCIYGGAPKGPQIRDLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRML 254 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + L I + S + + Sbjct: 255 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYI-HINIGALELSANHNI 313 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKT 508 Q V C EK K+ ++E ++ +KT Sbjct: 314 LQIVDVCHDVEKDEKLIRLMEEIMSEKENKT 344
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 44.3 bits (103), Expect = 4e-04 Identities = 35/151 (23%), Positives = 65/151 (43%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + S ++ GA QI L+ E I+TP RL++ + ++ + LV+D + Sbjct: 196 LKSTCIYGGAPKGPQIRDLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRML 254 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 D+ ++R I I D Q ++S + +A + L I + S + + Sbjct: 255 DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYI-HINIGALELSANHNI 313 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKT 508 Q V C EK K+ ++E ++ +KT Sbjct: 314 LQIVDVCHDVEKDEKLIRLMEEIMSEKENKT 344
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 44.3 bits (103), Expect = 4e-04 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + SV L G S+E Q G+ + P+ +I+TP R L L +D+S++ +V D Sbjct: 190 LKSVLLVGGDSLEEQF-GMMAGNPDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLF 248 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVAR-NLLHGRITKLTTNDSVASRSAF 412 ++ +L I + Q +FS +S AR L + +L T ++ Sbjct: 249 EMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESKISPD--- 305 Query: 413 VTQHVHFCTKE-EKTSKVKEILEHVLE 490 Q+ F K EK + IL V++ Sbjct: 306 -LQNAFFSVKSAEKEGALLYILNEVIK 331
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 43.9 bits (102), Expect = 5e-04 Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 6/175 (3%) Frame = +2 Query: 71 LHPGASIEHQISGLK-SCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GASI++QI ++ C L++TP RL +L+ + I ++NV LV+D +D+ Sbjct: 276 VYGGASIDNQIKQMRYGCN--LLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGF 333 Query: 248 IKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKL-----TTNDSVASRSAF 412 ++R I + G ++ + Q +AT + H L + V S S Sbjct: 334 EPQIRRI---VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSEN 390 Query: 413 VTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLE 577 +TQ + + +K + ++L AS L+ A L+ L +E Sbjct: 391 ITQKILYVEDFDKNDTLLDLLA------ASNEGLTLIFVETKRAADSLTDFLIME 439
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 43.9 bits (102), Expect = 5e-04 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +++ GA I QI + + C+ L +TP RL++L+ I ++N+ LV+D Sbjct: 284 VRPCAVYGGADIRAQIRQIDQGCD--LLSATPGRLVDLIDRGRISLANIKFLVLDEADRM 341 Query: 233 MDLNIIKELRSI----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 +D+ ++R I T + Q +FS + +AR+ L + + V S Sbjct: 342 LDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYV--FLSVGRVGS 399 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEIL 475 S +TQ V EK S + +IL Sbjct: 400 TSENITQKVVHVEDSEKRSYLLDIL 424
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 43.9 bits (102), Expect = 5e-04 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C+ L++TP RL +L+ + ++++ LV+D +D+ Sbjct: 273 VYGGADIGGQIRNLERGCD--LLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMGF 330 Query: 248 IKELRSIRGTIS----GDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I D Q +FS + +AR+ L I + V S S + Sbjct: 331 EPQIRHIVQECDMPGVEDRQTLMFSATFPKEIQFLARDFLKEYI--FLSVGRVGSTSENI 388 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ + + EEK S + ++L Sbjct: 389 TQKILYVEDEEKKSVLLDLL 408
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 43.9 bits (102), Expect = 5e-04 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 8/174 (4%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I Q+ + + C+ L++TP RL++L+ I + N+ LV+D +D+ Sbjct: 309 VYGGADIGSQLRQIERGCD--LLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMGF 366 Query: 248 IKELRSIRGTISG-------DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++R I + G + Q +FS + +AR+ L + + V S S Sbjct: 367 EPQIRRI---VEGEDMPNVNERQTLMFSATFPRDIQMLARDFLKDYV--FLSVGRVGSTS 421 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +TQ V + +K S +L +L H + + L+ +A LS L Sbjct: 422 ENITQKVEYVEDHDKRS----VLLDILHTHGT-SGLTLIFVETKRMADALSDFL 470
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 43.1 bits (100), Expect = 8e-04 Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I Q+ + + C+ L +TP RL++L+ I +SNV LV+D +D+ Sbjct: 309 VYGGADIVTQLRQIERGCD--LLSATPGRLVDLMERGRISLSNVRFLVLDEADRMLDMGF 366 Query: 248 IKELRSIRGTISG-------DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++R I + G D Q +FS + +A++ L + + V S S Sbjct: 367 EPQIRRI---VEGEDMPGVMDRQTLMFSATFPRDIQLLAKDFLKEYV--FLSVGRVGSTS 421 Query: 407 AFVTQHVHFCTKEEKTSKVKEIL 475 +TQ + + ++K S + ++L Sbjct: 422 ENITQKIEYVEDDDKRSVLLDVL 444
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 43.1 bits (100), Expect = 8e-04 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 LI TP R+L+ L ++ SN+ MLV+D +D+ K L +I T+S Q +FS Sbjct: 166 LIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFS 225 Query: 311 GQCDQSAATVAR 346 QS A +AR Sbjct: 226 ATQSQSVADLAR 237
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 43.1 bits (100), Expect = 8e-04 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 2/147 (1%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 + SV L G S+E Q + + P+ +I+TP R L L +D+S++ +V D Sbjct: 169 LKSVLLVGGDSLEEQFAMIAG-NPDIIIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLF 227 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVAR-NLLHGRITKLTTNDSVASRSAF 412 ++ +L I + + Q +FS +S AR L + +L T ++ Sbjct: 228 EMGFAAQLTEILHGLPANRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPD--- 284 Query: 413 VTQHVHFCTK-EEKTSKVKEILEHVLE 490 Q+ F K EK + IL V++ Sbjct: 285 -LQNAFFSVKSSEKEGALLYILHEVIK 310
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 42.7 bits (99), Expect = 0.001 Identities = 40/191 (20%), Positives = 75/191 (39%), Gaps = 10/191 (5%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCE--PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + + + G I+ I L + E P ++ TP RL LV K + + NV V+D Sbjct: 156 VKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDK 215 Query: 230 FMD--------LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTN 385 +D ++ ++++ I D QV +FS Q + + + + + Sbjct: 216 MLDQIGKQAQIAHMRRDVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDD 275 Query: 386 DSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSS 565 D+ + ++ ++ EK K+ E+L+ + N K L A N KL Sbjct: 276 DTKLTLHGLQQYYIKL-SESEKNRKLNELLDSLEFNQVIIFVKSTLRA---NELDKLLRE 331 Query: 566 LKLEILTVNDG 598 + V+ G Sbjct: 332 CNFPSIAVHSG 342
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 42.4 bits (98), Expect = 0.001 Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 2/174 (1%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ +S G + Q+ L++ + L++TP RLL+ + + V ++V+D Sbjct: 112 GLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRM 171 Query: 233 MDLNIIKELRSI--RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +D+ I ++R I + + Q +FS +A+ ++VAS + Sbjct: 172 LDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASET 231 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 V QHV+ + K K + V +N K +V++ A + +++ L Sbjct: 232 --VEQHVYAVAGSD---KYKLLYNLVTQN---KWERVMVFANRKDEVRRIEEKL 277
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 2/145 (1%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 L + +S A +++QI K + +ISTP RL+++V +++D+S V L+ D Sbjct: 229 LSVALLSKSLAAKLKNQIVSDKKYD--IIISTPLRLIDIVKSESLDLSAVKYLIFDEADK 286 Query: 230 FMDLNIIKELRSIRGTIS-GDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 D +++ I S + +FS S +A++++ + + + A+ + Sbjct: 287 LFDKTFVEQTDDILSACSHPNISKVLFSATLPSSVEELAQSIMTDPVRVIIGHKEAANTN 346 Query: 407 AFVTQHVHFCTKEE-KTSKVKEILE 478 + Q + FC EE K ++++++ Sbjct: 347 --IEQKLVFCGNEEGKLVAIRQLIQ 369
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/139 (19%), Positives = 66/139 (47%), Gaps = 6/139 (4%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G S + QI+ +++ + L+ TP R+ + + +D+S + +V+D + +DL +++ Sbjct: 243 GTSYQSQINQIRN-GIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQV 301 Query: 260 RSI-----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQH 424 I + + Q +FS C Q VA+ + R ++ + ++A +H Sbjct: 302 EDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEH 361 Query: 425 VHF-CTKEEKTSKVKEILE 478 + C ++ + + ++L+ Sbjct: 362 LAIQCHWSQRPAVIGDVLQ 380
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/139 (19%), Positives = 66/139 (47%), Gaps = 6/139 (4%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G S + QI+ +++ + L+ TP R+ + + +D+S + +V+D + +DL +++ Sbjct: 246 GTSYQSQINHIRN-GIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQV 304 Query: 260 RSI-----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQH 424 I + + Q +FS C Q VA+ + R ++ + ++A +H Sbjct: 305 EDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEH 364 Query: 425 VHF-CTKEEKTSKVKEILE 478 + C ++ + + ++L+ Sbjct: 365 LAIQCHWSQRPAVIGDVLQ 383
>DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 740 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 LI TP RLL+ + D+SNV MLV+D +D+ K + +I + D Q +FS Sbjct: 164 LICTPGRLLQHMDQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDRQTLLFS 223 Query: 311 GQCDQSAATVAR 346 +S + +AR Sbjct: 224 ATQTKSVSDLAR 235
>SPB4_USTMA (Q4P9E5) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 767 Score = 41.6 bits (96), Expect = 0.002 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Frame = +2 Query: 110 LKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGD 289 L+ + L+ TP RL EL+S K + S++ +LV+D +DL + LR I + Sbjct: 204 LRDSGADILVGTPGRLEELLSKKGVKKSSLEVLVLDEADRLLDLGFTENLRRILSLLPKQ 263 Query: 290 AQVTIFSGQCDQSAATVARNLLHGRI-------TKLTTNDSV--ASRSAFVTQHVH-FCT 439 + +FS + + + R L + K T+ S+ + R+ Q+++ C Sbjct: 264 RRTGLFSATMTDALSELVRIGLRNPVRVVVKVEAKHKTSSSIDDSRRTPATLQNLYQLCR 323 Query: 440 KEEKTSKVKEI-LEHVLENHASKTAKVLLV 526 + K +++ I L +N S A+ L+V Sbjct: 324 AQNKLAQLARIVLFESSQNAISGGARKLIV 353
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 LI TP R+L+ + ++ SN+ MLV+D +D+ K L +I G + D Q +FS Sbjct: 166 LIGTPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQKTLDAIVGNLPPDRQTLLFS 225 Query: 311 GQCDQSAATVAR 346 QS + +AR Sbjct: 226 ATQSQSISDLAR 237
>SPB4_KLULA (Q6CN92) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 596 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/108 (20%), Positives = 49/108 (45%) Frame = +2 Query: 83 ASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELR 262 AS+ I+ P+ L+ TP R+L+ + + ++ +V+D +DLN K++ Sbjct: 128 ASVRDDINSFTDNRPQILVGTPGRVLDFLQKTNVKTASCGTVVLDEADKLLDLNFQKDVE 187 Query: 263 SIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +I + + +FS + + A + + + + ++S A S Sbjct: 188 TILKMLPKQRRTGLFSATIESAGAQIFKTGMRNPVKVAVKSNSSAPSS 235
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 41.2 bits (95), Expect = 0.003 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 3/146 (2%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLK 226 S+ I ++ G + Q LK+ +++TP RL +L ++D+ V LV+D Sbjct: 185 SVDIRVTCIYGGVKKDEQREALKTAA--IVVATPGRLKDLKDDGSVDLGKVKYLVLDEAD 242 Query: 227 GFMDLNIIKELRS-IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASR 403 +D ++++ IR T Q +F+ S +A + + +T D A Sbjct: 243 RMLDKGFEQDIKDIIRSTPDSTRQTVMFTATWPPSVRDLAASFMTSAVTVTIGGDPSADP 302 Query: 404 SA--FVTQHVHFCTKEEKTSKVKEIL 475 A + Q V +EK +++ ++L Sbjct: 303 RANTRIKQVVEVVKPQEKEARLVQLL 328
>AROB_PICTO (Q6L1G8) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 338 Score = 40.8 bits (94), Expect = 0.004 Identities = 38/177 (21%), Positives = 82/177 (46%) Frame = +2 Query: 68 SLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 SL G +IE ++ + + +P+++I ER++ L S+ A +S VS K F D Sbjct: 170 SLKMGITIEPELFNIINNDPDYIIENIERIITL-SINA-KLSIVS-------KDFHDKKH 220 Query: 248 IKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHV 427 ++ + + TI G A + F+ A ++ I+K N +++ + + + Sbjct: 221 LRYVLNFGHTI-GHALESYFNNNISHGEAVANGMIIEAYISKCLGNADISNEIRSIIKRL 279 Query: 428 HFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDG 598 F + ++ + +LE++ + S++ + +VA N K+ + E+L + G Sbjct: 280 GFKIIDFRSVDINRLLEYIKNDKKSESGYINIVAVNGIGRYKIEALSPEEMLKILGG 336
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 40.4 bits (93), Expect = 0.005 Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 5/178 (2%) Frame = +2 Query: 80 GASIEHQISGLKSCE--PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNII 250 G I + LK+ + P +++TP RL LV+ K+I ++N+ VID ++ +++ Sbjct: 157 GTPITRDLEKLKNKDTCPHIVVATPGRLHALVTEKSIRLNNIKSFVIDECDKVLEAVDMR 216 Query: 251 KELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVH 430 ++++ I QV +FS Q V + + + ++ +D + Q+ Sbjct: 217 RDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPL-EIYVDDEAKLTLHGLQQYYI 275 Query: 431 FCTKEEKTSKVKEILEHVLENHASKTAKVLLVAAND--NVAQKLSSSLKLEILTVNDG 598 ++EK K+ ++L+ + N ++ V + N KL S + V+ G Sbjct: 276 KLDEKEKNRKLSDLLDSLEFNQV-----IIFVRSTQRANELNKLLCSSNFPSIAVHSG 328
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 40.4 bits (93), Expect = 0.005 Identities = 36/180 (20%), Positives = 75/180 (41%) Frame = +2 Query: 17 ASAFNV*TAESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN 196 A AF A ++ + ++ G+S Q++GL+ + ++ TP R+++ + +D+S Sbjct: 98 AEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR-GAQVVVGTPGRMIDHLERATLDLSR 156 Query: 197 VSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKL 376 V LV+D + + ++ I QV +FS + ++ LH ++ Sbjct: 157 VDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPF-EV 215 Query: 377 TTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKL 556 T A ++ K + ++V E+ E + V A + +A+KL Sbjct: 216 TCKAKTAVAENISQSYIQVARKMDALTRVLEV-----EPFEAMIVFVRTKQATEEIAEKL 270
>DBP10_GIBZE (Q4HZ42) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 897 Score = 40.4 bits (93), Expect = 0.005 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLN 244 V L G S+E Q G + P+ +I+TP R L L ++D+S++ +V D ++ Sbjct: 184 VLLVGGDSLEEQF-GYMAANPDIVIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMG 242 Query: 245 IIKELRSIRGTISGDAQVTIFSGQCDQSAATVAR-NLLHGRITKLTTNDSVAS--RSAFV 415 +L I + Q +FS S AR L + +L V+ SAF Sbjct: 243 FAAQLTEILHALPPSRQSLLFSATLPASLVEFARAGLQDPSLVRLDAEQKVSPDLESAF- 301 Query: 416 TQHVHFCTK-EEKTSKVKEILEHVLE 490 F K EK + IL V++ Sbjct: 302 -----FAVKGAEKEGSLLHILHDVIK 322
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 40.0 bits (92), Expect = 0.007 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 7/211 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELV-SLKAIDISNVSMLVIDGLKGFMDLNIIKE 256 G ++ Q LK+ PE +I+TP R ++ V + + ++ +V +LVID ++ +E Sbjct: 361 GLNLRVQEQELKT-RPEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQE 419 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 L I + Q +FS + S +++ + L R ++ N + S V + V Sbjct: 420 LTEILTLLPKKRQTLLFSATMNSSISSLIQ-LSLSRPVRVMINPPKQAASGLVQEFVRI- 477 Query: 437 TKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDG------ 598 K +K L + K + ++ A A +L + L +L V G Sbjct: 478 ---RKRDHLKPALLASILKKMDKEQRTIIFVARKETAHRL--RIMLGLLGVRIGELHGAL 532 Query: 599 SQGSTFTVCSSMGLINVLVKGCESLATSGVE 691 SQ ++ + V + C LA+ G++ Sbjct: 533 SQEQRLQSITAFKKLEVPILVCTDLASRGLD 563
>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 40.0 bits (92), Expect = 0.007 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 6/156 (3%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDI--SNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQV 298 P L+STP RLLEL+S + S+ MLV+D +DL + L++I + + Sbjct: 165 PNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNIIRRLPKQRRT 224 Query: 299 TIFSGQCDQSAATVARNLLHGRITKLT----TNDSVASRSAFVTQHVHFCTKEEKTSKVK 466 +FS ++ + R L + + T+ + R+ Q + T T Sbjct: 225 GLFSASISEAVDQIVRVGLRNPVKVMVKVKGTSGAQDKRTPASLQMTYLTT---PTIHKF 281 Query: 467 EILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKL 574 + L+H+L + K + A+ + LS+ L L Sbjct: 282 DALKHILHSVDPTPQKTIFFASTCSGVDYLSAILPL 317
>UAP56_DROME (Q27268) ATP-dependent RNA helicase WM6 (EC 3.6.1.-) (DEAD box| protein UAP56) (HEL/UAP56) Length = 424 Score = 40.0 bits (92), Expect = 0.007 Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKE 256 G +I+ LKS P ++ TP R+L L+ K +++ + V+D ++ L++ ++ Sbjct: 148 GMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRD 207 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 ++ I + QV +FS + V + + + ++ +D + QH Sbjct: 208 VQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPM-EVYVDDEAKLTLHGLQQHYVNL 266 Query: 437 TKEEKTSKVKEILEHVLE 490 + EK K+ E+L+ VLE Sbjct: 267 KENEKNKKLFELLD-VLE 283
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 39.7 bits (91), Expect = 0.009 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGL 223 S+G+ SV + G + Q L +P L++TP R+++ L K + N+ LV+D Sbjct: 159 SMGLRSVCIVGGMDMMDQARDLMR-KPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEA 217 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTN 385 +D++ L I I +FS A + R LH + +N Sbjct: 218 DRLLDMDFGPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSN 271
>ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) (Rescuer of| KEM1 protein 1) Length = 564 Score = 39.7 bits (91), Expect = 0.009 Identities = 28/135 (20%), Positives = 66/135 (48%), Gaps = 2/135 (1%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 GA +++++ K + +ISTP RL+++V +A+D+S V L+ D D +++ Sbjct: 237 GAKLKNKVVSDKKYD--IIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVEQS 294 Query: 260 RSIRGTI-SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 I + +FS + +A++++ + + + A+ + + Q + FC Sbjct: 295 DDILSACREPSLRKAMFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTN--IEQKLIFC 352 Query: 437 TKEE-KTSKVKEILE 478 EE K ++++++ Sbjct: 353 GNEEGKLIAIRQLVQ 367
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 39.7 bits (91), Expect = 0.009 Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G++ ++ G + Q+ L++ + L++TP RLL+ + + V ++V+D Sbjct: 112 GLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRM 171 Query: 233 MDLNIIKELRSI--RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +D+ I ++R I + G+ Q +FS +A+ ++VAS + Sbjct: 172 LDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDT 231 Query: 407 AFVTQHVHFCTKEEK 451 V QHV+ +K Sbjct: 232 --VEQHVYAVAGSDK 244
>DBP6_YEAST (P53734) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-) (DEAD box| protein 6) Length = 629 Score = 39.3 bits (90), Expect = 0.012 Identities = 16/44 (36%), Positives = 32/44 (72%) Frame = +2 Query: 86 SIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 S++ + L + EP+ LI+TP RL++ +++K+I++ N+ L+ID Sbjct: 298 SLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIID 341
>SPB4_ASHGO (Q750F8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 599 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 2/108 (1%) Frame = +2 Query: 83 ASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELR 262 +S+ ++ P+ L+ TP RLL+ + + I S+ ++D +D+N K++ Sbjct: 128 SSVRDDVAAFLEHRPQILVGTPGRLLDFLKMPNIKTSSCGAAILDEADKLLDMNFEKDVE 187 Query: 263 SIRGTISGDAQVTIFSGQCDQSAATVARNLLHG--RITKLTTNDSVAS 400 +I + + +FS + V + + +++ T+N + +S Sbjct: 188 TILKMLPKQRRTGLFSATVSSAGTQVFKTGMRNPVKVSVKTSNKAPSS 235
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 39.3 bits (90), Expect = 0.012 Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 7/202 (3%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGD----AQ 295 + LI+TP RLL+++ + ++ + LV+D +DL +++SI + D Q Sbjct: 309 DILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQ 368 Query: 296 VTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEIL 475 +F+ S ++A+ L + ++ S +TQ V ++K K+ + Sbjct: 369 TMLFTATLSSSVESIAKGYLKNPL-HVSVGSRWDSDKPLITQVVRHTGDDDK--KLSFLK 425 Query: 476 EHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDG---SQGSTFTVCSSMGLIN 646 + +++N + D + +LS + I+T++ SQ + G N Sbjct: 426 DDLIKNGLPAIIFINYKETADWLTLRLSD--RFNIVTLHGSKSQSQRESAIQKLKSGTAN 483 Query: 647 VLVKGCESLATSGVEEFEIVLV 712 VL+ ++A G++ ++ LV Sbjct: 484 VLI--ATNVAARGLDIPDVALV 503
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 38.5 bits (88), Expect = 0.021 Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G + Q+ L++ + L++TP RLL+ + + V ++V+D +D+ I ++ Sbjct: 120 GMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQV 179 Query: 260 RSI--RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHF 433 R I + G+ Q +FS + +A+ + +S+ S V QH++ Sbjct: 180 RQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTD--PSIVEIESLNVASDNVEQHIYA 237 Query: 434 CTKEEK 451 +K Sbjct: 238 VAGADK 243
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 38.5 bits (88), Expect = 0.021 Identities = 25/135 (18%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + +++ ++ G +++ + ++ + + TP R+L+++ + + NV MLV+D Sbjct: 118 MNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADE 177 Query: 230 FMD--LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASR 403 + L +++ I + + QV + S ++ V R ++ + L D ++ Sbjct: 178 LLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLE 237 Query: 404 SAFVTQHVHFCTKEE 448 + Q+V KEE Sbjct: 238 G--IKQYVVNVDKEE 250
>SUB2_EMENI (Q5ASK8) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 451 Score = 38.5 bits (88), Expect = 0.021 Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 20/201 (9%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL--KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + + + G I+ I L K P ++ TP RL LV K + + NV V+D Sbjct: 157 VKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDK 216 Query: 230 FMD------------------LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 +D L++ ++++ I D QV +FS Q + + + Sbjct: 217 MLDQIGRSFNPNSQSRSPLTPLDMRRDVQEIFRATPTDKQVMMFSATLSQDVRPICKKFM 276 Query: 356 HGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAAN 535 + +D+ + ++ ++ EK K+ E+L+ + N K + A Sbjct: 277 RNPLEVYVDDDTKLTLHGLQQYYIKL-SEAEKNRKLNELLDSLEFNQVIIFVKSTIRA-- 333 Query: 536 DNVAQKLSSSLKLEILTVNDG 598 N KL + V+ G Sbjct: 334 -NELDKLLRECNFPSIAVHSG 353
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 38.5 bits (88), Expect = 0.021 Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 6/168 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G IE SG+ + L+ TP R+ + + +D++ + +V+D + +D+ ++ Sbjct: 371 GGQIERMRSGI-----DILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQV 425 Query: 260 RSI-----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQH 424 I + + Q +FS C VA+ + ++ ++A +H Sbjct: 426 EEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEH 485 Query: 425 VHF-CTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSS 565 + C E+ + + +++ V H +T ++ AQ+LS + Sbjct: 486 LAIKCHWTERAAVIGDVI-RVYSGHQGRT---IIFCETKKDAQELSQN 529
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 38.5 bits (88), Expect = 0.021 Identities = 23/89 (25%), Positives = 41/89 (46%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 E I S G + I LK +P ++ TP R+ +L+ +A+ + LVID Sbjct: 100 EGSQIRSKCFIGGTDKQKSIDKLK-IQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEA 158 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFS 310 +D+ + ++ I + D Q+ +FS Sbjct: 159 DLMLDMGFLADVDYIGSRMPEDLQMLVFS 187
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 38.5 bits (88), Expect = 0.021 Identities = 26/141 (18%), Positives = 62/141 (43%), Gaps = 1/141 (0%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 G V+L+ G + Q+ LK + ++ TP R+L+ + +++S + +V+D Sbjct: 102 GTRIVTLYGGQRYDIQLRALKQ-GAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEM 160 Query: 233 MDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHG-RITKLTTNDSVASRSA 409 + + I ++ ++ + + Q +FS + + + ++ + K+ N+ A Sbjct: 161 LRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDID 220 Query: 410 FVTQHVHFCTKEEKTSKVKEI 472 +VH K E + E+ Sbjct: 221 QSCWYVHGVRKNEALLRFLEV 241
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 38.1 bits (87), Expect = 0.027 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 3/146 (2%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLK 226 S+G+ + G E Q LK+ +++TP RL +L + ++D+ V LV+D Sbjct: 180 SVGVRVACVFGGVRKEEQREALKTAG--VVVATPGRLKDLQNDGSVDLGKVKYLVLDEAD 237 Query: 227 GFMDLNIIKELRS-IRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASR 403 +D ++++ IR Q +F+ S +A + +T D A Sbjct: 238 RMLDKGFEQDIKDIIRPMPVSKRQTIMFTATWPPSVRDLASTFMSSPVTVTIGGDPSADP 297 Query: 404 SA--FVTQHVHFCTKEEKTSKVKEIL 475 A + Q V EK S++ ++L Sbjct: 298 RANTRIKQVVEVVKPHEKESRLVQLL 323
>SPB4_ASPFU (Q4WYJ7) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 640 Score = 37.7 bits (86), Expect = 0.035 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDI--SNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQV 298 P L+STP RLLEL+S + S+ MLV+D +DL + L++I + + Sbjct: 165 PNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRT 224 Query: 299 TIFSGQCDQSAATVAR 346 +FS ++ + R Sbjct: 225 GLFSASVSEAVDQIVR 240
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 37.7 bits (86), Expect = 0.035 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I +Q+ + + C+ L++TP RL +L+ + ++N+ LV+D +D+ Sbjct: 271 VYGGAPIGNQMREVDRGCD--LLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGF 328 Query: 248 IKELRSIRGTIS----GDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + Q +FS +AR+ L I + V S S + Sbjct: 329 EPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYI--FLSVGRVGSTSENI 386 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ + + +K S + ++L Sbjct: 387 TQRILYVDDMDKKSALLDLL 406
>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 550 Score = 37.4 bits (85), Expect = 0.046 Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 2/125 (1%) Frame = +2 Query: 110 LKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISG- 286 + S + + L+STP RL++ + + I +S V LVID D +++ I + Sbjct: 234 INSSKYDILVSTPLRLIDSIKNETISLSKVEQLVIDETDKLFDQGFVEQTDEILSNCTNT 293 Query: 287 DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEE-KTSKV 463 + ++FS +A++++ I + + AS + + Q + F EE K + Sbjct: 294 KLRKSMFSATIPSGVEEMAQSIMKDPIRVIIGHKEAASNT--IEQKLVFTGNEEGKLLAI 351 Query: 464 KEILE 478 +++++ Sbjct: 352 RQMIQ 356
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 37.4 bits (85), Expect = 0.046 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 LI TP RLL+ + ++ SN+ +LV+D +D+ K L +I + Q +FS Sbjct: 166 LIGTPGRLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKALDAIVSNLPPSRQTLLFS 225 Query: 311 GQCDQSAATVAR 346 QS A +AR Sbjct: 226 ATQSQSLADLAR 237
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 37.4 bits (85), Expect = 0.046 Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKE 256 G SI+ LK P ++ TP R+L LV +++++ NV V+D ++ L++ ++ Sbjct: 150 GLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRD 209 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 ++ I + Q +FS + V R + + +++ + +V Sbjct: 210 VQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL- 268 Query: 437 TKEEKTSKVKEILEHVLE 490 EK K+ ++L+ VLE Sbjct: 269 KDSEKNRKLFDLLD-VLE 285
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 37.4 bits (85), Expect = 0.046 Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKE 256 G SI+ LK P ++ TP R+L LV +++++ NV V+D ++ L++ ++ Sbjct: 150 GLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRD 209 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 ++ I + Q +FS + V R + + +++ + +V Sbjct: 210 VQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL- 268 Query: 437 TKEEKTSKVKEILEHVLE 490 EK K+ ++L+ VLE Sbjct: 269 KDSEKNRKLFDLLD-VLE 285
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 37.0 bits (84), Expect = 0.061 Identities = 29/146 (19%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCE--PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + + + G+ I+ I +++ E P +++TP RL LV K + + NV VID Sbjct: 155 VKTAVFYGGSPIQKDIELIQNKETSPHVIVATPGRLHALVRDKHLRLGNVKTFVIDECDK 214 Query: 230 FMD-LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 +D +++ ++++ I QV +FS Q + + + + L ++ + Sbjct: 215 VLDQIDMRRDVQEIFRVTPRQKQVMMFSATLSQEIRPICKKFMSSPLEILVDDEGKLTLH 274 Query: 407 AFVTQHVHFCTKEEKTSKVKEILEHV 484 +V ++ K K+ ++L+++ Sbjct: 275 GLQQYYVD-VEEKSKNRKLGDLLDNL 299
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 37.0 bits (84), Expect = 0.061 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKAI-DISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+L+ + A+ D+ N+ MLV+D +D+ K + +I G + + Q +FS Sbjct: 170 LVCTPGRMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKERQTLLFS 229 Query: 311 GQCDQSAATVAR 346 + + +AR Sbjct: 230 ATQTKKVSDLAR 241
>Y623_MYCPN (P75172) Probable ATP-dependent RNA helicase MG425 homolog (EC| 3.6.1.-) (C12_orf450) Length = 450 Score = 37.0 bits (84), Expect = 0.061 Identities = 22/96 (22%), Positives = 47/96 (48%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLN 244 VSL G I Q+ L++ +PE ++ T R+++L+ I ++ L+ID + +D Sbjct: 105 VSLIGGIPIWQQLKQLEN-QPEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRG 163 Query: 245 IIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNL 352 ++L + I Q+ ++S ++ A+ + Sbjct: 164 FKRKLFDLLSRIEKFEQIAVYSASYNEETIETAKQI 199
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 37.0 bits (84), Expect = 0.061 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 3/138 (2%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ G S HQ + + C +I+TP RLL+ V I + +V+D +D+ Sbjct: 352 VYGGTSFRHQNECITRGCH--VVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGF 409 Query: 248 IKELRSI--RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQ 421 +++R I T+ + Q +FS + +A L + V + V Q Sbjct: 410 SEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYV--FVAIGIVGGACSDVKQ 467 Query: 422 HVHFCTKEEKTSKVKEIL 475 ++ K K SK+ EIL Sbjct: 468 TIYEVNKYAKRSKLIEIL 485
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 37.0 bits (84), Expect = 0.061 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 341 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 398 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G Q +FS + +AR+ L I V S S + Sbjct: 399 EPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLDEYI--FLAVGRVGSTSENI 456 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + + +K S + ++L Sbjct: 457 TQKVVWVEEMDKRSFLLDLL 476
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 36.6 bits (83), Expect = 0.079 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 5/171 (2%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 299 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 414 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 TQ V + + +K S + ++L N K + +L+ A L L Sbjct: 415 TQKVVWVEEADKRSFLLDLL-----NATGKDSLILVFVETKKGADSLEDFL 460
>SPB4_YARLI (Q6C193) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 626 Score = 36.6 bits (83), Expect = 0.079 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +2 Query: 122 EPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVT 301 +P+ +++TP RLLEL+ I S LV+D +DL +++ SI + + Sbjct: 156 KPQIIVATPGRLLELLRAPQIKTSAFDSLVLDEADRLLDLGFGRDITSIINILPKQRRTG 215 Query: 302 IFS 310 +FS Sbjct: 216 LFS 218
>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 605 Score = 36.6 bits (83), Expect = 0.079 Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 1/191 (0%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 P+ ++STP R++ + A+ + N++ LVID + +++ ++ I Q + Sbjct: 154 PDLVVSTPARVVTNLGSSALSLENLTHLVIDEADLVLSYGYEEDINALAKAIPRGVQTFL 213 Query: 305 FSGQCDQSAATVARNLLHGRIT-KLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEH 481 S T+ +T KL D + A V+Q V C ++EK +L + Sbjct: 214 MSATLTDEVDTLKGLFCRSPVTLKLEDKD---DQGAGVSQFVVRCAEDEKF-----LLTY 265 Query: 482 VLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKG 661 V+ KV++ D+V + L LE + S + S + ++ KG Sbjct: 266 VIFKLQLIKGKVIIFV--DDVDRCYRVKLFLEQFGIKSCVLNSELPINSRIHVVQEFNKG 323 Query: 662 CESLATSGVEE 694 + + E+ Sbjct: 324 VYDILIAADEQ 334
>DBP7_EMENI (Q5BGX6) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 778 Score = 36.6 bits (83), Expect = 0.079 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L++TP RL + L + +A+D+SNV LV+D M+L KEL+ I + + + Sbjct: 293 LVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQEIISKLDARQRPSRIP 352 Query: 311 GQCDQSAATVARNLLHGRITKL---TTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEH 481 G + A + L + KL + D+V ++ + T E+K + Sbjct: 353 GVPAKRATILCSATLKMNVQKLGEISLKDAVHIKADPADEDGE-KTAEDKDGDAFRVPAQ 411 Query: 482 VLENHASKTAKVLLV 526 + +++A AK+ LV Sbjct: 412 LKQSYAIVAAKLRLV 426
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 36.2 bits (82), Expect = 0.10 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C+ +++TP RL +L+ I + +V LV+D +D+ Sbjct: 262 VYGGADIRQQIRELERGCD--LIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMGF 319 Query: 248 IKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKL-----TTNDSVASRSAF 412 ++R I + G T+ + Q +AT ++ H L + V S S Sbjct: 320 EPQIRHI---VEGCDMPTVENRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSEN 376 Query: 413 VTQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILT 586 +TQ V +K S + ++L AS L+ +A L+ L ++ L+ Sbjct: 377 ITQKVLHVEDIDKRSVLLDLLA------ASDGGLTLVFVETKRMADALTDFLIMQNLS 428
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 36.2 bits (82), Expect = 0.10 Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 7/217 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKE 256 G ++ Q LK+ P+ +I+TP R ++ L + + + +V +LVID ++ +E Sbjct: 342 GLNLRQQEQALKT-RPDIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEE 400 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 L+ I I Q +FS + + +L + ++ + + + + Sbjct: 401 LQEIMSLIPSKRQTLLFSATMNSKIKQLI-SLSLKKPVRIMIDPPKQAADKLTQEFIRIR 459 Query: 437 TKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVND--GS--Q 604 ++ + L L+N + K ++++ A A KL L L + V + GS Q Sbjct: 460 KRDHLKPALLYQLIRKLDNTSQK--RIVVFVARKETAHKLRIVLGLLGMQVGELHGSLTQ 517 Query: 605 GSTFTVCSSMGLINVLVKGCESLATSGVE--EFEIVL 709 ++ + V V C LA+ G++ + E+V+ Sbjct: 518 EQRLQSVNNFKSLQVPVLICTDLASRGLDIPKIEVVI 554
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 36.2 bits (82), Expect = 0.10 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 1/138 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKE 256 G SI+ LK P ++ TP R+L LV ++ + NV V+D ++ L++ ++ Sbjct: 150 GLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRD 209 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 ++ I + Q +FS + V R + + +++ + +V Sbjct: 210 VQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL- 268 Query: 437 TKEEKTSKVKEILEHVLE 490 EK K+ ++L+ VLE Sbjct: 269 KDSEKNRKLFDLLD-VLE 285
>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 36.2 bits (82), Expect = 0.10 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAI--DISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQV 298 P L++TP RLLEL+S + S+ MLV+D +DL + L++I + + Sbjct: 165 PNLLVATPGRLLELLSSPHVYCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRT 224 Query: 299 TIFSGQCDQSAATVAR 346 +FS ++ + R Sbjct: 225 GLFSASVSEAVDQIVR 240
>SPB4_DEBHA (Q6BSM3) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 614 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/124 (19%), Positives = 56/124 (45%) Frame = +2 Query: 83 ASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELR 262 +S+ I + + LI+TP RLL+ +S + ++V + V+D +D++ +++ Sbjct: 137 SSVREDIDYFLTNKTHILIATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVI 196 Query: 263 SIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTK 442 I + + +FS + T+ R + + K+ + +A + +V + Sbjct: 197 KILKQLPKQRRTGLFSATISSAGDTIFRTGMANPV-KIVVKSKNSKNAAPTSLNVSYMHV 255 Query: 443 EEKT 454 E +T Sbjct: 256 EPET 259
>DDX10_HUMAN (Q13206) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 35.8 bits (81), Expect = 0.13 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 4/157 (2%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLL----ELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 G ++H+ + + L+ TP RLL E VS A D+ MLV+D +D+ Sbjct: 178 GKDLKHEAERINNIN--ILVCTPGRLLQHMDETVSFHATDLQ---MLVLDEADRILDMGF 232 Query: 248 IKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHV 427 + ++ + Q +FS +S +AR L + S A + Q+ Sbjct: 233 ADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNY 292 Query: 428 HFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAAND 538 C ++K S +L L +H K + V + + Sbjct: 293 IVCELQQKIS----VLYSFLRSHLKKKSIVFFSSCKE 325
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 35.8 bits (81), Expect = 0.13 Identities = 25/144 (17%), Positives = 64/144 (44%), Gaps = 3/144 (2%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLK--SCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 + + + G +I+ + K S P +++TP RL LV K + +++V V+D Sbjct: 149 VRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDK 208 Query: 230 FMD-LNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRS 406 ++ +++ ++++ + QV +FS + + + + ++ +D Sbjct: 209 LLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPL-EIYVDDETKLTL 267 Query: 407 AFVTQHVHFCTKEEKTSKVKEILE 478 + QH ++ K K+ ++L+ Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLD 291
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 35.8 bits (81), Expect = 0.13 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 299 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 414 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + + +K S + ++L Sbjct: 415 TQKVVWVEESDKRSFLLDLL 434
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 35.8 bits (81), Expect = 0.13 Identities = 28/168 (16%), Positives = 69/168 (41%), Gaps = 6/168 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G E +G+ + L+ TP R+ + + +D++ + +V+D + +D+ ++ Sbjct: 299 GGQFERMRNGI-----DILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQV 353 Query: 260 RSI-----RGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQH 424 I + + Q +FS C VA+ + ++ ++A +H Sbjct: 354 EEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEH 413 Query: 425 VHF-CTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSS 565 + C ++ + + +++ V H +T ++ AQ+LS + Sbjct: 414 LAIKCHWTQRAAVIGDVI-RVYSGHQGRT---IIFCETKKEAQELSQN 457
>DBP6_ASHGO (Q751D1) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 607 Score = 35.8 bits (81), Expect = 0.13 Identities = 15/44 (34%), Positives = 30/44 (68%) Frame = +2 Query: 86 SIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 S++ + + LK+ EP+ LI TP RL++ ++++ + N+ LV+D Sbjct: 285 SLKEESAKLKAQEPDVLIITPGRLVDHLNMQTFSLKNLKFLVLD 328
>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 679 Score = 35.4 bits (80), Expect = 0.18 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 VSL SI+ + L++ EP+ ++STP RL++ ++ I + N+ LVID Sbjct: 345 VSLKNDLSIKEEGIKLQTNEPDIIVSTPGRLVDHLTNGYISLKNLQYLVID 395
>DBP7_ASPOR (Q2UE66) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.18 Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSI 268 L++TP RL + L + +A+D+SNV LV+D M+L KEL+ I Sbjct: 280 LVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQGI 325
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 35.4 bits (80), Expect = 0.18 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 3/148 (2%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDG 220 AE + I + G + Q LKS +++TP RL +L + ++D+ V LV+D Sbjct: 170 AEKVDIQVACIFGGVKKDEQREALKSAA--VVVATPGRLKDLQNDGSLDLGRVKYLVLDE 227 Query: 221 LKGFMDLNIIKELRSIRGTIS-GDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVA 397 +D ++++ I + Q +F+ +A + +T D A Sbjct: 228 ADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSA 287 Query: 398 S--RSAFVTQHVHFCTKEEKTSKVKEIL 475 ++ + Q V EK ++ +IL Sbjct: 288 DPRANSRIKQVVEVVKPHEKEQRLVQIL 315
>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)| Length = 578 Score = 35.4 bits (80), Expect = 0.18 Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Frame = +2 Query: 110 LKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISG- 286 +KS + + ++STP RL+++V +D+S + L+ID D ++ I + Sbjct: 251 IKSSKYDIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHGFAEQTDEILTHCTNL 310 Query: 287 DAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEE-KTSKV 463 + +IFS S +A +++ + + + AS + + Q + F E+ K + Sbjct: 311 KIRKSIFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNT--IDQKLVFTGNEQGKLLAI 368 Query: 464 KEILE 478 +++++ Sbjct: 369 RQMIQ 373
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 35.4 bits (80), Expect = 0.18 Identities = 18/86 (20%), Positives = 41/86 (47%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 + LG + + G + I+ + +++TP RL++ + K +D+S LV+D Sbjct: 271 KKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEA 330 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVT 301 +D+ K+L + + + Q++ Sbjct: 331 DRMIDMGFEKDLNKVLDKLPTEKQLS 356
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 35.0 bits (79), Expect = 0.23 Identities = 18/87 (20%), Positives = 38/87 (43%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ ++V +++ N+ M V+D + ++ I + G QV +FS Sbjct: 163 VVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSA 222 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D + Sbjct: 223 TMPPEALEITRKFMNKPVRILVKRDEL 249
>ME31_DROME (P23128) Putative ATP-dependent RNA helicase me31b (EC 3.6.1.-)| (Maternal expression at 31B) Length = 459 Score = 35.0 bits (79), Expect = 0.23 Identities = 18/61 (29%), Positives = 34/61 (55%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 + +I+TP R+L+L+ K D+S+ +LV+D + L+ L + + D Q+ +F Sbjct: 178 QLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLF 237 Query: 308 S 310 S Sbjct: 238 S 238
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 35.0 bits (79), Expect = 0.23 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 5/148 (3%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +V ++ G + H I + + C L +TP RL++++ + I + + LV+D Sbjct: 395 VRAVVIYGGTQLGHSIRQIVQGCN--ILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 452 Query: 233 MDLNI---IKELRSIRGTISGDAQVTI-FSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 +D+ +K+L S G S + + T+ FS + +A L + V Sbjct: 453 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGG 511 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHV 484 V Q V + K K+ EIL ++ Sbjct: 512 ACRDVQQTVLQVGQFSKREKLVEILRNI 539
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 35.0 bits (79), Expect = 0.23 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 5/148 (3%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +V ++ G + H I + + C L +TP RL++++ + I + + LV+D Sbjct: 394 VRAVVIYGGTQLGHSIRQIVQGCN--ILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 451 Query: 233 MDLNI---IKELRSIRGTISGDAQVTI-FSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 +D+ +K+L S G S + + T+ FS + +A L + V Sbjct: 452 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGG 510 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHV 484 V Q V + K K+ EIL ++ Sbjct: 511 ACRDVQQTVLQVGQFSKREKLVEILRNI 538
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 35.0 bits (79), Expect = 0.23 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKAI-DISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+L+ + A+ D N+ MLV+D +DL + + +I G + + Q +FS Sbjct: 172 LVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFS 231 Query: 311 GQCDQSAATVAR 346 + + +AR Sbjct: 232 ATQTKKVSDLAR 243
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 34.7 bits (78), Expect = 0.30 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 8/218 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKE 256 G ++ Q LK P+ +I+TP R+++ + A + +V +LVID ++ E Sbjct: 328 GLNLRQQEQALK-LRPDIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDE 386 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 L I I Q +FS + + L + + A+ +TQ Sbjct: 387 LNEIMSLIPSKRQTLLFSATMNSRIKQLISLSLKKPVRIMIDPPKQAANK--LTQEFVRL 444 Query: 437 TKEEKTSKVKEILEHVLENHASKTAK-VLLVAANDNVAQKLSSSLKLEILTVND--GS-- 601 K E +L H+L S K +++ A VA +L L L + + GS Sbjct: 445 RKREHLKPA--LLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSLT 502 Query: 602 QGSTFTVCSSMGLINVLVKGCESLATSGVE--EFEIVL 709 Q ++ ++V V C LA+ G++ + E+V+ Sbjct: 503 QEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVI 540
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 34.7 bits (78), Expect = 0.30 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 298 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 413 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + +K S + +IL Sbjct: 414 TQKVVWVEDLDKRSFLLDIL 433
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 34.7 bits (78), Expect = 0.30 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 298 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 413 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + +K S + +IL Sbjct: 414 TQKVVWVEDLDKRSFLLDIL 433
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKAI-DISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+L+ + A + N+ MLV+D MD+ K + +I G + + Q +FS Sbjct: 173 LVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFS 232 Query: 311 GQCDQSAATVAR 346 + + +AR Sbjct: 233 ATQTKKVSDLAR 244
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 34.7 bits (78), Expect = 0.30 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 299 VYGGAEIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 414 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + + +K S + ++L Sbjct: 415 TQKVVWVEEIDKRSFLLDLL 434
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 34.7 bits (78), Expect = 0.30 Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 11/179 (6%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLN 244 V L+ GAS + Q L + + +++TP RL + +S +D+S+ + V+D +D Sbjct: 262 VCLYGGASKDDQ-RNLLNRGADIIVATPGRLKDFMSDGTVDLSHSAFAVLDEADRMLDKG 320 Query: 245 IIKELRSIRGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRIT-------KLTTNDSV- 394 ++++ I + Q +F+ QS T+A + + K T +V Sbjct: 321 FEEDIKMILSSCPPREKRQTLMFTATWPQSVQTLAATFMVSPVKIAIGSGGKETAGGAVE 380 Query: 395 ASRSAFVTQHVHFCTKEEKTSKVKEIL-EHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +A ++Q V K ++ E+L EH + + K ++L+ A ++ + L Sbjct: 381 LQANARISQSVEVLEPRGKEFRLLEVLKEH--QQGSKKNDRILVFCLYKKEATRIENFL 437
>SPB4_GIBZE (Q4HVW2) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDI--SNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQV 298 P LIS+P RL+EL+S + S+ +LV+D +DL +L+ I + + Sbjct: 163 PNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDLGFKPDLQKILSHLPKQRRT 222 Query: 299 TIFSGQCDQSAATVAR 346 +FS ++ + R Sbjct: 223 GLFSASVSEAVGEIIR 238
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 34.3 bits (77), Expect = 0.39 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 LI TP R+L+ + + SN+ +LV+D +D+ + L +I + Q +FS Sbjct: 166 LIGTPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASRQTLLFS 225 Query: 311 GQCDQSAATVARNLLH-----GRITKLTTNDSVASRSAFVTQHV 427 QS +AR L G + L N S A+ + ++ Sbjct: 226 ATQSQSLDDLARLSLTDYKQVGTMEVLNANSSSATPESLQQSYI 269
>DDX10_MOUSE (Q80Y44) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 34.3 bits (77), Expect = 0.39 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 1/154 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKE 256 G ++H+ + + L+ TP RLL+ + +N+ MLV+D +D+ Sbjct: 178 GKDLKHEAERINNIN--ILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADT 235 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 + +I + Q +FS +S +AR L + S A + Q+ C Sbjct: 236 MNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIIC 295 Query: 437 TKEEKTSKVKEILEHVLENHASKTAKVLLVAAND 538 +K S +L L +H K + V + + Sbjct: 296 ELHQKIS----VLFSFLRSHLKKKSIVFFSSCKE 325
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 34.3 bits (77), Expect = 0.39 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDG 220 AE LG VS+ G + E Q S S +++TP RLL+ + + +S + +V+D Sbjct: 349 AEPLGFRCVSVVGGHAFEEQ-SFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDE 407 Query: 221 LKGFMDLNIIKELRSIRGTI-------------------SGDAQVTIFSGQCDQSAATVA 343 +D+ ++ I ++ S Q +FS A +A Sbjct: 408 ADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLA 467 Query: 344 RNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKE-EKTSKVKEILE 478 ++ L + + T ++ V Q V + + +K +V+EILE Sbjct: 468 KSYLIEPV--MLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILE 511
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 34.3 bits (77), Expect = 0.39 Identities = 23/109 (21%), Positives = 47/109 (43%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 P+ ++STP R++ + A+ + N++ LVID + +++ ++ I Q + Sbjct: 184 PDLIVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYDEDINALAKAIPRGVQTFL 243 Query: 305 FSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEK 451 S T+ L R + + A ++Q V C ++EK Sbjct: 244 MSATLTSEVDTLKG--LFCRSPVILKLEDKEDEGAGISQFVVRCAEDEK 290
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 34.3 bits (77), Expect = 0.39 Identities = 17/105 (16%), Positives = 45/105 (42%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ +++ L++ P ++ TP R+ ++++ + + + M V+D G + ++ Sbjct: 139 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQI 198 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ QV + S V + + I L + + Sbjct: 199 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEEL 243
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 34.3 bits (77), Expect = 0.39 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDG 220 A LG VS+ G IE Q L+ E +++TP RLL+ + + + +S +++D Sbjct: 388 AGPLGFRVVSIVGGHQIEEQAYNLRD-GAEIVVATPGRLLDCIERRLLVLSQCCYVIMDE 446 Query: 221 LKGFMDLNIIKELRSI 268 +DL + + I Sbjct: 447 ADRMIDLGFEESVNKI 462
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 33.9 bits (76), Expect = 0.51 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +V ++ G H + + + C L +TP RL++++ + I + V LV+D Sbjct: 367 VRAVVIYGGTQFGHSVRQIVQGCN--ILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRM 424 Query: 233 MDLNI---IKELRSIRGTISGD-AQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVAS 400 +D+ +K+L S G S + Q +FS + +A + L + V Sbjct: 425 LDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVG-QVGG 483 Query: 401 RSAFVTQHVHFCTKEEKTSKVKEILEHV 484 V Q + + K K+ EIL ++ Sbjct: 484 ACRDVQQTILQVGQYSKREKLVEILRNI 511
>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 595 Score = 33.9 bits (76), Expect = 0.51 Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 6/198 (3%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 P+ +I+TP R + V+ + + + LVID + ++++++ ++ Q + Sbjct: 141 PDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFL 200 Query: 305 FSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHV 484 S ++ A++ + + L D AS +TQ+V C++++K +L ++ Sbjct: 201 MSATLSKNIASLQKLVCRNPFI-LAVKDKEASGK--LTQYVVKCSEQDKF-----LLAYI 252 Query: 485 LENHASKTAKVLLVAANDNVAQKLSSSLK---LEILTVN-DGSQGSTFTVCS--SMGLIN 646 L K+L+ N +L L+ L+ L +N + S + + GL Sbjct: 253 LLKLRLIKGKILIFVNEINRCYRLKLFLEQFGLKSLVLNSELPVNSRLHILEQYNKGLYQ 312 Query: 647 VLVKGCESLATSGVEEFE 700 +++ ES +EE E Sbjct: 313 IIIATDESGMMGEIEELE 330
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 33.9 bits (76), Expect = 0.51 Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 1/191 (0%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 P+ ++STP R++ + A+ + N++ LVID + ++ ++ I Q + Sbjct: 155 PDIVVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYEDDINALSKAIPRGVQTFL 214 Query: 305 FSGQCDQSAATVARNLLHGR-ITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEH 481 S T+ I KL D A V+Q V C ++EK +L + Sbjct: 215 MSATLTAEVDTLKGLFCRSPVILKLEDKD---DHGAGVSQFVVKCAEDEKF-----LLTY 266 Query: 482 VLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKG 661 V+ KV++ + + + +L L LE + S V S + ++ KG Sbjct: 267 VIFKLQLIKGKVIIFVGDIDRSYRL--KLFLEQFGIKSCILNSELPVNSRIHVVEEFNKG 324 Query: 662 CESLATSGVEE 694 + + E+ Sbjct: 325 VYDIIIAADEQ 335
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 33.9 bits (76), Expect = 0.51 Identities = 17/87 (19%), Positives = 36/87 (41%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ ++++ A+D S + M V+D + ++ + ++ D QV + S Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSA 210 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 V + I L D + Sbjct: 211 TMPSEVLDVTNRFMRNPIRILVKKDEL 237
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 33.9 bits (76), Expect = 0.51 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLK 226 L + L G S+ Q L++ P+ LI+TP RL++ L + + +S + +LVID Sbjct: 324 LDVRFALLVGGLSLNAQAHTLRTL-PDILIATPGRLIDHLTNTPSFTLSALDVLVIDEAD 382 Query: 227 GFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQS 328 ++ EL I Q +FS S Sbjct: 383 RMLEAGFTDELEEIIKACPRSRQTMLFSATMTDS 416
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 33.9 bits (76), Expect = 0.51 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA I QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 298 VYGGADIGQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 413 Query: 416 TQHVHFCTKEEKTSKVKEIL 475 TQ V + +K S + ++L Sbjct: 414 TQKVVWVEDLDKRSFLLDLL 433
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 33.5 bits (75), Expect = 0.67 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%) Frame = +2 Query: 80 GASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD--LNII 250 G +++ IS + K C + TP R+L+++ + I+ +V MLV+D + L Sbjct: 128 GKALQQDISKVNKGCH--VMSGTPGRVLDMIKRRIINTRHVKMLVLDEADELLSETLGFK 185 Query: 251 KELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVA 397 ++L I + QV + S + V + + + L D V+ Sbjct: 186 QQLYDIFTKLPSSVQVVVVSATMSKVVLEVTKKFMSDPVKILVKRDEVS 234
>DBP9_KLULA (Q6CUI6) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 594 Score = 33.5 bits (75), Expect = 0.67 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 I ++L G + + L + PE LI+TP +L++L+ + ++I + LVID Sbjct: 122 IKCLNLSSGNVSGNLLKSLLTENPEILIATPAKLVDLLDAQDVNIDRLKFLVID 175
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 33.5 bits (75), Expect = 0.67 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+ + L ++ SN+ +LV+D +D+ K++ +I G + Q +FS Sbjct: 173 LVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFS 232 Query: 311 GQCDQSAATVAR 346 +S +AR Sbjct: 233 ATQSESVNDLAR 244
>OFUT1_CAEEL (Q18014) Putative GDP-fucose protein O-fucosyltransferase 1| precursor (EC 2.4.1.221) (Peptide-O-fucosyltransferase) (O-FucT-1) Length = 389 Score = 33.5 bits (75), Expect = 0.67 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 8/103 (7%) Frame = +2 Query: 386 DSVASRSAFVTQ-------HVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAAN-DN 541 D+ +R F ++ H+ TKE + ++ILE ++E S AK + VA++ D+ Sbjct: 253 DTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGAKSVFVASDKDH 312 Query: 542 VAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKGCES 670 + +++ +LK + + +T + MG ++ V C S Sbjct: 313 MIDEINEALKPYEIEAHRQEPDDMYTSLAIMGRADLFVGNCVS 355
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 33.5 bits (75), Expect = 0.67 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +2 Query: 113 KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKELRSIRGTISGD 289 K+ ++ TP +L+L+ K I + V V+D +D + + ++ + D Sbjct: 191 KAINAHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGDQCIRVKKFLPKD 250 Query: 290 AQVTIFSGQCDQSAATVARNLL 355 Q+ +FS D S AR ++ Sbjct: 251 TQLVLFSATFDDSVREYARRVV 272
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/105 (15%), Positives = 43/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ ++ L+ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ + QV + S V + + I L + + Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/105 (15%), Positives = 43/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ ++ L+ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ + QV + S V + + I L + + Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/105 (15%), Positives = 43/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ ++ L+ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ + QV + S V + + I L + + Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/105 (15%), Positives = 43/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ ++ L+ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ + QV + S V + + I L + + Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/105 (15%), Positives = 43/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ ++ L+ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 129 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 188 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ + QV + S V + + I L + + Sbjct: 189 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 233
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 33.1 bits (74), Expect = 0.87 Identities = 20/100 (20%), Positives = 48/100 (48%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 I + ++ +S + Q + LK + ++ TP R+L+ + + + +S LVID + Sbjct: 99 IKATAVFGKSSFDKQKAELKQ-KSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEML 157 Query: 236 DLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLL 355 ++ I+++ +I + + +FS Q ++R + Sbjct: 158 NMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYM 197
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 33.1 bits (74), Expect = 0.87 Identities = 18/72 (25%), Positives = 33/72 (45%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 + L+ TP + L+ K ID +V + V+D +D ++ I+ + QV +F Sbjct: 217 QILVGTPGSVAGLLQKKQIDAKHVKVFVLDEADNMVDSSMGSTCARIKKYLPSSTQVVLF 276 Query: 308 SGQCDQSAATVA 343 S +S +A Sbjct: 277 SATFPESVLDLA 288
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 33.1 bits (74), Expect = 0.87 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +V ++ G + H I + + C L +TP RL++++ + I + + LV+D Sbjct: 392 VRAVVIYGGTQLGHSIRQIVQGCN--ILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 449 Query: 233 MDLNI---IKELRSIRGTISGDAQVTI-FSGQCDQSAATVARNLL 355 +D+ +K+L S G S + + T+ FS + +A L Sbjct: 450 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFL 494
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 33.1 bits (74), Expect = 0.87 Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 20/218 (9%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKE 256 G S+ Q + LK P+ +I+TP R ++ + A + + +LV+D ++ E Sbjct: 410 GFSLREQENILKK-RPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADE 468 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQH---- 424 L I TI Q +FS S + R L+ + + DS + S + Q Sbjct: 469 LNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMV--DSKKNTSMNLIQEFVRL 526 Query: 425 ------------VHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 +H C KE T +V E H + A LL A +L S+ Sbjct: 527 RPGREDKRLGYLLHLC-KEVYTGRVIVFFRQKKEAHRVRIAFGLLGLK----AAELHGSM 581 Query: 569 KLE--ILTVNDGSQGS-TFTVCSSMGLINVLVKGCESL 673 E I +V + +G +F + + + + +KG E++ Sbjct: 582 SQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETV 619
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 33.1 bits (74), Expect = 0.87 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 5/171 (2%) Frame = +2 Query: 71 LHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNI 247 ++ GA QI L + C L++TP RL++++ I + LV+D +D+ Sbjct: 299 VYGGADTVQQIRDLERGCH--LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356 Query: 248 IKELRSI--RGTI--SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFV 415 ++R I + T+ G +FS + +AR+ L I V S S + Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI--FLAVGRVGSTSENI 414 Query: 416 TQHVHFCTKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSL 568 TQ V + + +K S + ++L N K + L+ A L + L Sbjct: 415 TQKVVWVEELDKRSFLLDLL-----NATGKDSLTLVFVETKKGADSLENFL 460
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+ + L ++ SN+ +LV+D +D+ K++ +I G + Q +FS Sbjct: 171 LVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQTLLFS 230 Query: 311 GQCDQSAATVAR 346 S +AR Sbjct: 231 ATQSDSVKDLAR 242
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 32.7 bits (73), Expect = 1.1 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 1/139 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKE 256 G S++ Q LK P+ +I+TP R ++ + A + V +LV+D ++ E Sbjct: 364 GLSLKAQELELK-LRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADE 422 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 L I T+ Q +FS S + + L+ R ++ N + + V + V Sbjct: 423 LNEILTTLPKSRQTMLFSATMTSSVDRLIQIGLN-RPARVMVNSQKKTVTTLVQEFVRL- 480 Query: 437 TKEEKTSKVKEILEHVLEN 493 + + K L HV +N Sbjct: 481 -RPGREDKRMGYLAHVCKN 498
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/45 (28%), Positives = 27/45 (60%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELR 262 + LI T R+++ + ID++++ ++V+D DL IK++R Sbjct: 136 DILIGTCGRIIDFYKQRVIDLASIQVVVLDEADRMFDLGFIKDIR 180
>DDX24_MOUSE (Q9ESV0) ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box| protein 24) Length = 857 Score = 32.7 bits (73), Expect = 1.1 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 8/126 (6%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSM---LV 211 A+ GI++ L G S + Q L PE +I+TP RL ELV K +SN+ LV Sbjct: 411 AKFTGINTAILVGGMSTQKQQRMLNR-HPEIVIATPGRLWELVKEKHPHLSNLRQLRCLV 469 Query: 212 IDGLKGFMDLNIIKELRSIRGTISG-----DAQVTIFSGQCDQSAATVARNLLHGRITKL 376 ID ++ EL + ++ Q +FS AR L + K+ Sbjct: 470 IDEADRMVEKGHFAELSQLLEMLNDSQYNPSRQTLVFSATLTLVHQAPARILHKKHVKKM 529 Query: 377 TTNDSV 394 D + Sbjct: 530 DKTDKL 535
>DBP7_ASPFU (Q4WV71) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 758 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSI 268 L++TP RL + L + +A+D+SNV LV+D M+L +E++ I Sbjct: 280 LVATPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGI 325
>SUB2_CRYNE (Q5KNA3) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 442 Score = 32.7 bits (73), Expect = 1.1 Identities = 26/134 (19%), Positives = 58/134 (43%), Gaps = 1/134 (0%) Frame = +2 Query: 86 SIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKELR 262 S + +I K P ++ TP R + LV K ++ S V V+D ++ L++ ++++ Sbjct: 169 SADQEILANKEKCPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLEQLDMRRDVQ 228 Query: 263 SIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTK 442 I QV +FS + + + + ++ +D + Q + Sbjct: 229 EIFRATPHHKQVMMFSATLSKDIRATCKKFMQSPL-EIYVDDETKLTLHGLQQFYLKLEE 287 Query: 443 EEKTSKVKEILEHV 484 EK K+ ++L+++ Sbjct: 288 REKNRKLNDLLDNL 301
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 32.3 bits (72), Expect = 1.5 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKE 256 G S+ Q + LK P+ +I+TP R ++ + + + + + +LV+D ++ E Sbjct: 418 GFSLREQENILKK-RPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADE 476 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQ 421 L I TI Q +FS S + R L+ + + DS + S +TQ Sbjct: 477 LNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMV--DSKKNTSMNLTQ 529
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 32.3 bits (72), Expect = 1.5 Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 7/217 (3%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKE 256 G ++ Q LK+ P+ +I+TP R ++ + A ++ +V +LVID ++ E Sbjct: 315 GLNLRQQEQMLKT-RPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDE 373 Query: 257 LRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFC 436 L I + Q +FS + + +L R ++ + + + + V Sbjct: 374 LNEIMSLLPSKRQTLLFSATMNSRIKQLI-SLSLKRPVRIMIDPPKQAATKLTQEFVRIR 432 Query: 437 TKEEKTSKVKEILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVND--GS--Q 604 ++ + L L+ + K ++++ A ++A KL L L + V + GS Q Sbjct: 433 KRDHLKPSLLFNLIRKLDPNGQK--RIVVFVARKDMAHKLRIILGLLGMAVAELHGSLTQ 490 Query: 605 GSTFTVCSSMGLINVLVKGCESLATSGVE--EFEIVL 709 + + V V C LA+ G++ + E+V+ Sbjct: 491 EQRLDSVNKFKSLQVPVLICTDLASRGLDIPKIEVVI 527
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP R+L+ + A D+ N+ MLV+D MD+ + + ++ + Q +FS Sbjct: 182 LVCTPGRMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSRQTLLFS 241 Query: 311 GQCDQSAATVAR 346 + + +AR Sbjct: 242 ATQSKRVSDLAR 253
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 32.3 bits (72), Expect = 1.5 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +2 Query: 56 IHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGF 232 + +V ++ G H I + + C L +TP RL++++ + I + V LV+D Sbjct: 379 VRAVVIYGGTQFGHSIRQIVQGCN--ILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRM 436 Query: 233 MDLNIIKELRSI 268 +D+ E++ + Sbjct: 437 LDMGFGPEMKKL 448
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 32.3 bits (72), Expect = 1.5 Identities = 14/59 (23%), Positives = 33/59 (55%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 +I+TP R+L+L+ + +V M+V+D + + ++ + I T+ + Q+ ++S Sbjct: 219 VIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 32.3 bits (72), Expect = 1.5 Identities = 14/59 (23%), Positives = 33/59 (55%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 +I+TP R+L+L+ + +V M+V+D + + ++ + I T+ + Q+ ++S Sbjct: 219 VIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
>DBP9_CANAL (Q5A4P9) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 574 Score = 32.3 bits (72), Expect = 1.5 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Frame = +2 Query: 122 EPEFLISTPERLLELV--SLKAIDISNVSMLVIDGLKGFMDLNIIKELRSI 268 +PE +ISTP +L++++ + K ID+S V L ID + + + +L+ + Sbjct: 137 KPEIIISTPAKLIQILEKNEKNIDLSTVKNLTIDEVDLVLSFGYLDDLKKL 187
>PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2109 Score = 32.3 bits (72), Expect = 1.5 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 13/182 (7%) Frame = +2 Query: 11 GGASAFNV*TAESLGIHSVS----LHPGASIE----HQISGLKSCEPEFLIST---PERL 157 G SAF + E+ +H S P SIE H+ISG S PE I T E Sbjct: 1512 GETSAFPEISIETSTVHETSGETSAFPEISIETSTVHEISGESSAFPEIRIETSTSQEAR 1571 Query: 158 LELVSLKAIDISNVSMLVIDG-LKGFMDLNI-IKELRSIRGTISGDAQVTIFSGQCDQSA 331 E + I I ++ I G F +++I +R I G S ++ I Q A Sbjct: 1572 GETSAFPEITIEASTIQEISGETSAFPEISIETSTVREISGETSAFPEIRI-ETSTSQEA 1630 Query: 332 ATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENHASKTA 511 L I T +++ SAF + T++E S+ E +E AS T Sbjct: 1631 RGETSALPEITIETSTVHETSGEASAFPEISIETSTRQEARSEASAYPEVSIE--ASTTQ 1688 Query: 512 KV 517 +V Sbjct: 1689 EV 1690
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 32.3 bits (72), Expect = 1.5 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Frame = +2 Query: 47 SLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGL 223 S+G+ S + G + Q L +P +++TP R+++ L K + N+ LV+D Sbjct: 77 SMGLRSSCIVGGMDMMDQARDLMR-KPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEA 135 Query: 224 KGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRI 367 +D++ L I I +FS + R LH + Sbjct: 136 DRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPV 183
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 32.0 bits (71), Expect = 1.9 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 1/118 (0%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 + +++TP RLL+ + + D +V ML+ D + + ++ I Q +F Sbjct: 128 DLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLF 187 Query: 308 SGQCD-QSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILE 478 S + + A LL+ + K+ S R + H + E K + +E Sbjct: 188 SATLEGELLVDFAERLLNDPV-KVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIE 244
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLK 226 +G+ + L G + Q L S P +++TP RL++ L + K + ++ LV+D Sbjct: 133 IGVRTAVLVGGMDMMSQSIAL-SKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEAD 191 Query: 227 GFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLH 358 +DL+ + I I + +FS A + R L+ Sbjct: 192 RLLDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLN 235
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/105 (17%), Positives = 42/105 (40%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G S+ + L+ P+ ++ TP R+ +++ + + ++ M V+D + +++ Sbjct: 157 GTSVRDDMKALQD-GPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQI 215 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I + QV + S Q V + + L D + Sbjct: 216 YDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMREPVRILVKKDEL 260
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 32.0 bits (71), Expect = 1.9 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 2/136 (1%) Frame = +2 Query: 134 LISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP RLL+ L + + N+ L+ID +++ +E++ I + + Q +FS Sbjct: 257 LVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKERQSMLFS 316 Query: 311 GQCDQSAATVAR-NLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVL 487 +AR +L G + +V+S + + Q C +++ +L L Sbjct: 317 ATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKRFL----LLFSFL 372 Query: 488 ENHASKTAKVLLVAAN 535 + +A K V L + N Sbjct: 373 KRNAGKKIIVFLSSCN 388
>POLG_EC23W (O73556) Genome polyprotein [Contains: Coat protein VP0 (P1AB); Coat| protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPg (P3 Length = 2179 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 447 SSLVQKCTCCVTNALREATESFVVSFVILPCSRFLATVAALWSH*PLNIVT--CASPDMV 274 S LVQKCT ++A E ++ +V F+I R L + L+ H P NI+T C S +V Sbjct: 925 SLLVQKCTTFFSSAATELLDNDLVKFIIKILVRILCYM-VLYCHKP-NILTTACLSTLLV 982 Query: 273 PRIERSSLM 247 + SS++ Sbjct: 983 MDVTSSSVL 991
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 31.6 bits (70), Expect = 2.5 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 41 AESLGIHSVSLHPGASIEHQISGL-KSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 A +G+ +V + G+ Q + L K+ + + +TP RL + +S +I ++NVS V+D Sbjct: 281 ASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLD 340 Query: 218 GLKGFMDLNIIKELRSI 268 +D ++++ I Sbjct: 341 EADRMLDRGFSEDIKLI 357
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 31.6 bits (70), Expect = 2.5 Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 20/157 (12%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 LG VS+ G S + Q ++ E +++TP RLL+++ + + ++ +V+D Sbjct: 266 LGFKVVSVVGGYSAQEQALAVQE-GAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADR 324 Query: 230 FMDLNIIKELRSIRGTISGD--------------------AQVTIFSGQCDQSAATVARN 349 +D+ ++++ + ++ Q +++ + +A+ Sbjct: 325 MVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEKLAKK 384 Query: 350 LLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSK 460 L R + T S + VTQ V F +EK + Sbjct: 385 YL--RRPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKR 419
>ETFA_CLOTS (P71153) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 330 Score = 31.6 bits (70), Expect = 2.5 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++S + +V+L+ DI I G GF NIIKEL +RG + G ++ T+ +G Sbjct: 195 ILSIAKEAKNVVNLEEADIIVSGGRGIGGPDGF---NIIKELADVRGGVVGASRATVDAG 251 Query: 314 ------QCDQSAATVARNL 352 Q Q+ TV L Sbjct: 252 WITSDHQVGQTGKTVRPKL 270
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 31.6 bits (70), Expect = 2.5 Identities = 13/59 (22%), Positives = 33/59 (55%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 +I+TP R+L+L+ + ++ M+V+D + + ++ + I T+ + Q+ ++S Sbjct: 218 VIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLYS 276
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 31.6 bits (70), Expect = 2.5 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFS 310 L+ TP RLL+ + D S + ML++D +D+ L +I ++ Q +FS Sbjct: 164 LVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFS 223 Query: 311 GQCDQSAATVAR 346 +S +AR Sbjct: 224 ATQTKSVKDLAR 235
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 31.6 bits (70), Expect = 2.5 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEP-EFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 GI + G ++ I L EP L+ TP R+L+L S K D+S S+ V+D Sbjct: 125 GISCMVTTGGTNLRDDIMRLN--EPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADK 182 Query: 230 FMDLNIIKELRSIRGTISGDAQVTIFS 310 + + + I + + Q +FS Sbjct: 183 MLSRDFKSLVEQILSFLPQNHQSLLFS 209
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 31.6 bits (70), Expect = 2.5 Identities = 28/134 (20%), Positives = 54/134 (40%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 LGI + G ++ I L+ L+ TP R+L+L D+S M ++D Sbjct: 123 LGIKVMVTTGGTNLRDDIMRLEDTV-HVLVGTPGRVLDLAGKGVADLSESPMFIMDEADK 181 Query: 230 FMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSA 409 + + + + D Q+ +FS + LH + ++ D + R Sbjct: 182 LLSPDFTPIIEQVLHFFPEDRQILLFSATFPLTVKAFMDRNLH-KPYEINLMDELTLRG- 239 Query: 410 FVTQHVHFCTKEEK 451 +TQ+ F +++K Sbjct: 240 -ITQYYAFVDEKQK 252
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 31.6 bits (70), Expect = 2.5 Identities = 16/87 (18%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ N+ M V+D + ++ I + QV +FS Sbjct: 159 VVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSA 218 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D + Sbjct: 219 TMPPEALEITRKFMNKPVRILVKRDEL 245
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLK-SCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLK 226 LGI +V++ G S E Q L+ CE +I+TP RL++++ + + +S + +V+D Sbjct: 495 LGIRTVAVIGGISREDQGFRLRMGCE--IVIATPGRLIDVLENRYLVLSRCTYVVLDEAD 552 Query: 227 GFMDLNIIKELRSI 268 +D+ +++ I Sbjct: 553 RMIDMGFEPDVQKI 566
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 31.6 bits (70), Expect = 2.5 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKA-IDISNVSMLVIDGLKGFMDLNIIKE 256 G S++ Q + LK PE +I+TP RL++ V A + ++ +LV+D ++ E Sbjct: 445 GLSVKSQEAELK-LRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADE 503 Query: 257 LRSI-RGTISGDAQVTIFSGQCDQSAATVAR 346 L I + G Q +FS + R Sbjct: 504 LNEIVKSCPKGARQTMLFSATMTDDVEQLVR 534
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMD-LNIIKELRSIRGTISGDAQVTIFS 310 ++ TP LL+L+ K I + NV + V+D +D + + ++ + D Q+ +FS Sbjct: 234 VVGTPGTLLDLIRRKLIQLQNVKIFVLDEADNMLDKQGLGDQCIRVKKFLPKDTQLVLFS 293 Query: 311 GQCDQSAATVARNLL 355 + A+ ++ Sbjct: 294 ATFADAVKAYAQKVI 308
>POLG_EC23C (Q9YID8) Genome polyprotein [Contains: Coat protein VP0 (P1AB); Coat| protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPg (P3 Length = 2188 Score = 31.2 bits (69), Expect = 3.3 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 447 SSLVQKCTCCVTNALREATESFVVSFVILPCSRFLATVAALWSH*PLNIVT--CASPDMV 274 S LVQKCT ++A E ++ +V F++ R L + L+ H P NI+T C S ++ Sbjct: 934 SLLVQKCTTFFSSAATEILDNDLVKFIVKILVRILCYM-VLYCHKP-NILTTACLSTLLI 991 Query: 273 PRIERSSLM 247 + SS++ Sbjct: 992 MDVTSSSVL 1000
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/87 (18%), Positives = 36/87 (41%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ N+ M V+D + ++ I + QV +FS Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R + + L D + Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDEL 247
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 31.2 bits (69), Expect = 3.3 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKS-CEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDL 241 VS+ G S+E + L+ C+ L++TP RLL+ + + + V+ LV+D +D Sbjct: 248 VSIVGGHSLEEISANLRDGCD--ILVATPGRLLDCLDSHLLFLKQVNTLVLDEADKMIDF 305 Query: 242 NIIKELRSIRG---TISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAF 412 +L +I TIS + Q +F+ + VA L + ++ Sbjct: 306 GFEDQLTTILAKTETIS-NRQTMMFTATFSPTIEKVANGYL--------------KKPSY 350 Query: 413 VTQHVHFCTKEEKTSKVKEILEHV 484 VT EE K+K+I+ +V Sbjct: 351 VT-----VGGEESKPKIKQIVRYV 369
>IF4A6_TOBAC (Q40469) Eukaryotic initiation factor 4A-6 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-6) (eIF-4A-6) (Fragment) Length = 253 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/87 (19%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ N+ M V+D + ++ I + QV IFS Sbjct: 3 VVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGIFSA 62 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D + Sbjct: 63 TMPPEALEITRKFMNKPVRILVKRDEL 89
>UAP56_CAEEL (Q18212) Spliceosome RNA helicase BAT1 homolog (EC 3.6.1.-) (DEAD| box protein UAP56) Length = 425 Score = 31.2 bits (69), Expect = 3.3 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Frame = +2 Query: 53 GIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL-KG 229 G+ G +I+ L + P ++ TP R+L L + + V V+D K Sbjct: 138 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKM 197 Query: 230 FMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSA 409 D ++ ++++ I QV +FS + TV + + + ++ +D Sbjct: 198 IGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPM-EVYVDDEAKLTLH 256 Query: 410 FVTQHVHFCTKEEKTSKVKEILE 478 + QH + EK ++ +L+ Sbjct: 257 GLQQHYVKLKEAEKNRRLLNLLD 279
>POLG_EC22H (Q66578) Genome polyprotein [Contains: Coat protein VP0 (P1AB); Coat| protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPg (P3 Length = 2180 Score = 31.2 bits (69), Expect = 3.3 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 447 SSLVQKCTCCVTNALREATESFVVSFVILPCSRFLATVAALWSH*PLNIVT--CASPDMV 274 S LVQKCT ++A E ++ +V F++ R L + L+ H P NI+T C S ++ Sbjct: 926 SLLVQKCTTFFSSAATEILDNDLVKFIVKILVRILCYM-VLYCHKP-NILTTACLSTLLI 983 Query: 273 PRIERSSLM 247 + SS++ Sbjct: 984 MDVTSSSVL 992
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/105 (15%), Positives = 44/105 (41%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ +++ L++ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 138 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQI 197 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ QV + S V + + I L + + Sbjct: 198 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEEL 242
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/105 (15%), Positives = 44/105 (41%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ +++ L++ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 138 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQI 197 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ QV + S V + + I L + + Sbjct: 198 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEEL 242
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/105 (15%), Positives = 44/105 (41%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 G ++ +++ L++ P ++ TP R+ ++++ + + + M V+D + ++ Sbjct: 138 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQI 197 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 I ++ QV + S V + + I L + + Sbjct: 198 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEEL 242
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 31.2 bits (69), Expect = 3.3 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSI-RGTISGDAQVT 301 P+ ++STP R + A+ ++ + LV+D + +++ +I R G Q T Sbjct: 221 PDVIVSTPARAWHNIESGALSVAKLQYLVLDEADLVLSYGYDEDMENIARSLPKGGVQTT 280 Query: 302 IFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEK 451 + S + T L + ++ +TQ C +++K Sbjct: 281 MMSATLVSDELDTLKGFFCRNPTMLDLKEEFSNEDEKLTQFYVKCGEDDK 330
>DBP6_CANGA (Q6FST5) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 651 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +2 Query: 86 SIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVID 217 S + L EP+ I+TP RL++ ++ +I + N+ LV+D Sbjct: 317 SFNEEHKRLLKTEPDIFITTPGRLVDHLTNSSISLRNLKFLVLD 360
>UVRB_BACSK (Q5WDG7) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 660 Score = 30.8 bits (68), Expect = 4.3 Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 10/176 (5%) Frame = +2 Query: 137 ISTPERLLELV-SLKA---IDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 + +PE +LV S++ +D +++ ++D D+N ++ +RG + V I Sbjct: 148 LGSPEEYRDLVLSIRTGMEMDRNSLLRKLVDIQYDRNDINFVRGTFRVRGDV-----VEI 202 Query: 305 FSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHV------HFCTKEEKTSKVK 466 F D+ V I ++T D++ HV HF T+EEK K Sbjct: 203 FPASRDEQCMRV--EFFGDEIERITEVDALTGEIKGERHHVSIFPASHFVTREEKMKKAI 260 Query: 467 EILEHVLENHASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSM 634 +E LE S K +KL + +LE T D + CS + Sbjct: 261 ANIEVELEERLSVLRK----------EEKLLEAQRLEQRTRYDLEMMAEMGFCSGI 306
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELR-SIRGTISGDAQVTI 304 + +I TP + +++ K ID + + + V+D +D + E ++ T+ Q+ + Sbjct: 182 QLIIGTPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQQSLGEQSIRVKNTMPKSCQLVL 241 Query: 305 FS 310 FS Sbjct: 242 FS 243
>DBP5_NEUCR (Q8X0X2) ATP-dependent RNA helicase dbp-5 (EC 3.6.1.-)| Length = 483 Score = 30.8 bits (68), Expect = 4.3 Identities = 18/65 (27%), Positives = 32/65 (49%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 +++G +L A+I IS ++ TP +++LV + DIS + +LVID Sbjct: 166 QTIGQFCENLIVEAAIPGAISRETGVRGSVVVGTPGTVMDLVKRRQFDISQLKVLVIDEA 225 Query: 224 KGFMD 238 +D Sbjct: 226 DNMLD 230
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 30.8 bits (68), Expect = 4.3 Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 4/173 (2%) Frame = +2 Query: 137 ISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSGQ 316 + TP R+ +++ A+ ++ +LV+D + ++ I + D QV +FS Sbjct: 152 VGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSAT 211 Query: 317 CDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENH 496 + + + + + L +S+ + Q +E K + ++ E V Sbjct: 212 MPEEVLELTKKFMRDPVRILVKRESLTLEG--IKQFFIAVEEEHKLDTLMDLYETVSIAQ 269 Query: 497 ----ASKTAKVLLVAANDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLI 643 A+ KV +A N + SS+ E+ + +TF SS L+ Sbjct: 270 SVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLV 322
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/118 (16%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKS-CEPEFLISTPERLLELVSLKAIDISNVSMLVIDG 220 E + +HS + G ++ L+S C ++ TP R+ ++++ K + + + V+D Sbjct: 123 EYMKVHSHACIGGTNVREDARILESGCH--VVVGTPGRVYDMINRKVLRTQYIKLFVLDE 180 Query: 221 LKGFMDLNIIKELRSIRGTISGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSV 394 + +++ + + D QV + S V+R + ++ L + + Sbjct: 181 ADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEEL 238
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/87 (18%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ N+ M V+D + ++ I + QV +FS Sbjct: 162 VVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 221 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D + Sbjct: 222 TMPPEALEITRKFMNKPVRILVKRDEL 248
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/87 (22%), Positives = 36/87 (41%) Frame = +2 Query: 50 LGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKG 229 LGI+ + G + I L+ ++ TP R+L+L D+S M ++D Sbjct: 137 LGINVMVTTGGTGLRDDIIRLQD-PVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADK 195 Query: 230 FMDLNIIKELRSIRGTISGDAQVTIFS 310 + + + + D QV +FS Sbjct: 196 LLSIEFTPVIEQLLQFHPKDRQVMLFS 222
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Frame = +2 Query: 83 ASIEHQISGLKSCEPEFLISTPERLLE-LVSLKAIDISNVSMLVIDGLKGFMDLNIIKEL 259 A ++ ++G+ +++TP RLL+ + + N+ LVID +D+ +EL Sbjct: 283 AEVQKLLNGIN-----IIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 337 Query: 260 RSIRGTISGDAQVTIFSGQCDQSAATVAR 346 + I + Q +FS + +AR Sbjct: 338 KQIIKLLPARRQTMLFSATQTRKVEDLAR 366
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVID 217 L+ TP R+L+L S K D+S+ S+ ++D Sbjct: 168 LVGTPGRVLDLASRKVADLSDCSLFIMD 195
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 30.4 bits (67), Expect = 5.7 Identities = 17/75 (22%), Positives = 38/75 (50%) Frame = +2 Query: 44 ESLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGL 223 + L ++ V++ G E + +++ +++TP RL++ + I++SN +D Sbjct: 262 DKLNLNVVTIIGGHQYEETVHSVRN-GVHIVVATPGRLIDSLERGIINLSNCYFFTMDEA 320 Query: 224 KGFMDLNIIKELRSI 268 +D+ K L+SI Sbjct: 321 DKMIDMGFEKSLQSI 335
>MRH4_ASPOR (Q2TZH2) ATP-dependent RNA helicase mrh4, mitochondrial precursor| (EC 3.6.1.-) Length = 628 Score = 30.4 bits (67), Expect = 5.7 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Frame = +2 Query: 128 EFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIF 307 + L+STP L + + +S VS LV+D MD + + I ++ + I Sbjct: 320 DILVSTPHLLASIAKTEPYVLSRVSHLVLDEADSLMDRSFLPTTTEIISKVAPSLRKLIL 379 Query: 308 SGQCDQSAATVARNLLHGR---ITKLTT 382 C + NLL R I +LTT Sbjct: 380 ---CSATIPRSLDNLLRKRYPDIKRLTT 404
>DBP9_YARLI (Q6BZR4) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 544 Score = 30.4 bits (67), Expect = 5.7 Identities = 24/117 (20%), Positives = 47/117 (40%) Frame = +2 Query: 101 ISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTI 280 IS L +P ++ TP RLL+ K +D S V LVID + ++L + + Sbjct: 126 ISSLLEEKPSIIVGTPSRLLKYA--KEMDCSKVGYLVIDEADLLLSYGYKEDLIELSEML 183 Query: 281 SGDAQVTIFSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEK 451 I S ++ + + + + + + A + Q+ C++ +K Sbjct: 184 PKTKHTFIMSATLNKESDLMKQQFCRSTVASVAV--TAAEEERKLLQYYVKCSERDK 238
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 30.4 bits (67), Expect = 5.7 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVID 217 L+ TP R+L+L S K D+S S+ V+D Sbjct: 153 LVGTPGRVLDLASRKVADLSECSLFVMD 180
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 30.4 bits (67), Expect = 5.7 Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 1/139 (0%) Frame = +2 Query: 125 PEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTI 304 P +++TP RLL+ + + + ++ LV+D +D+ + + Q + Sbjct: 123 PHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLL 182 Query: 305 FSGQCDQSAATVARNLLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVK-EILEH 481 FS ++ A ++ GR+ + + S A F E +SK K +L+ Sbjct: 183 FSATWPEAIAAIS-----GRVQRDPLAIEIDSTDALPPIEQQF---YETSSKGKIPLLQR 234 Query: 482 VLENHASKTAKVLLVAAND 538 +L H + V D Sbjct: 235 LLSLHQPSSCVVFCNTKKD 253
>RR30_SPIOL (P19954) Plastid-specific 30S ribosomal protein 1, chloroplast| precursor (CS-S5) (CS5) (S22) (Ribosomal protein 1) (PSRP-1) Length = 302 Score = 30.4 bits (67), Expect = 5.7 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +2 Query: 533 NDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKGCE 667 N N+ LS+S+ L N S STFT S+GL NV VK + Sbjct: 12 NPNLTNSLSNSINLSSTPTNLSSLRSTFTNSCSLGL-NVAVKSVQ 55
>DDX1_HUMAN (Q92499) ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) (DEAD box| protein 1) (DEAD box protein retinoblastoma) (DBP-RB) Length = 740 Score = 30.0 bits (66), Expect = 7.4 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = +2 Query: 80 GASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISNVSMLVIDGLKGFM 235 G + Q+S L++ + ++ TP RL +LVS +++S V LV+D G + Sbjct: 326 GVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376
>YO12_CAEEL (P34668) Putative ATP-dependent RNA helicase ZK686.2 in chromosome| III (EC 3.6.1.-) Length = 593 Score = 30.0 bits (66), Expect = 7.4 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLK---AIDISNVSMLVID 217 VSL E + L S P +++TP RL++ ++ K ID+S + L++D Sbjct: 221 VSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLRFLIVD 274
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/87 (18%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ ++ M V+D + ++ I + QV +FS Sbjct: 162 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 221 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D V Sbjct: 222 TMPPEALEITRKFMNQPVRILVKRDDV 248
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 30.0 bits (66), Expect = 7.4 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTI-SGDAQVTIFS 310 LI+TP RLL+ + N+ LVID +++ E+R I + D Q +FS Sbjct: 241 LIATPGRLLDHLQNTPFVFKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKEDRQTMLFS 300 Query: 311 GQCDQSAATVAR 346 +AR Sbjct: 301 ATQTTKVEDLAR 312
>GPT_CRILO (P23338) UDP-N-acetylglucosamine--dolichyl-phosphate| N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GPT) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GlcNAc-1-P transferase) Length = 408 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%) Frame = +2 Query: 569 KLEILTVNDG-SQGSTFTVCSSMGLINVLVK 658 +L+++TV+ G S+ FT C++M LIN+L+K Sbjct: 339 RLQLVTVHRGESEDGAFTECNNMTLINLLLK 369
>GPT_CRIGR (P24140) UDP-N-acetylglucosamine--dolichyl-phosphate| N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GPT) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GlcNAc-1-P transferase) Length = 408 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%) Frame = +2 Query: 569 KLEILTVNDG-SQGSTFTVCSSMGLINVLVK 658 +L+++TV+ G S+ FT C++M LIN+L+K Sbjct: 339 RLQLVTVHRGESEDGAFTECNNMTLINLLLK 369
>AROC_CHRVO (Q7NYT5) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 366 Score = 30.0 bits (66), Expect = 7.4 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 13/76 (17%) Frame = -3 Query: 324 WSH*PLNIVTCASPDMVPRIERSSLMILRSMNPFSPSMTSI-------------DTFDIS 184 W H N A PD+VPR+E I +S++ + + D D Sbjct: 170 WEHVGGNPFFSADPDIVPRLEEYMDSIRKSLDSIGARLRVVADNVPVGWGEPVFDRLDAD 229 Query: 183 IAFSETSSRSLSGVDI 136 IA++ S ++ GV+I Sbjct: 230 IAYAMMSINAVKGVEI 245
>DBP9_DEBHA (Q6BLM5) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 586 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Frame = +2 Query: 101 ISGLKSCEPEFLISTPERLLEL----VSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSI 268 I+ L +PE ++STP +L+++ V+ I++S V L ID + + +++L+ + Sbjct: 138 INSLLINKPEIIVSTPAKLIQILEKNVNSNLINLSTVKNLTIDEVDLVLSYGYLEDLQKL 197
>XRCC1_RAT (Q9ESZ0) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 631 Score = 30.0 bits (66), Expect = 7.4 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Frame = +2 Query: 419 QHVHFCTKEEKTSKVKEILEHVLENHAS-KTAKVLLVAANDNVAQKLSSSLKLEILTVND 595 +HV C+ ++ T + + +L+ + + ++AK A ++ L + +I +V+ Sbjct: 7 RHVVSCSSQDSTHRAENLLK--ADTYRKWRSAK----AGEKTISVVLQLEKEEQIHSVDI 60 Query: 596 GSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVLV 712 G+ GS F + VLV AT+G +++E++LV Sbjct: 61 GNDGSAF--------VEVLVGSSAGGATAGEQDYEVLLV 91
>Y170_METJA (Q57634) Hypothetical mscS family protein MJ0170| Length = 350 Score = 30.0 bits (66), Expect = 7.4 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 350 LLHGRITKLTTNDSVASRSAFVTQHVHFCTKEEKTSKVKEILEHVLENH 496 LL I LT D R +T + + T EK + KEI++ ++ENH Sbjct: 235 LLDSAIENLTVRDR---RRVLMTIGLTYNTPVEKIKRAKEIIKEIVENH 280
>MS116_YEAST (P15424) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 664 Score = 30.0 bits (66), Expect = 7.4 Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Frame = +2 Query: 65 VSLHPGASIEHQISGLKSCEPEFLISTPERLLELVSLKAIDISN-VSMLVIDGLKGFMDL 241 VSL G ++ + P +I+TP RL++++ + V V+D +++ Sbjct: 216 VSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEI 275 Query: 242 NIIKELRSIRGTI-------SGDAQVTIFSGQCDQSAATVARNLLH 358 +L +I G + + + + +FS D +A N+++ Sbjct: 276 GFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMN 321
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/87 (18%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ ++ M V+D + ++ I + QV +FS Sbjct: 162 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 221 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D V Sbjct: 222 TMPPEALEITRKFMNKPVRILVKRDDV 248
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/87 (18%), Positives = 37/87 (42%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +++ ++ M V+D + ++ I + QV +FS Sbjct: 162 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 221 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 A + R ++ + L D V Sbjct: 222 TMPPEALEITRKFMNKPVRILVKRDDV 248
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 30.0 bits (66), Expect = 7.4 Identities = 18/87 (20%), Positives = 34/87 (39%) Frame = +2 Query: 134 LISTPERLLELVSLKAIDISNVSMLVIDGLKGFMDLNIIKELRSIRGTISGDAQVTIFSG 313 ++ TP R+ +++ +A+ V M V+D + ++ I + AQV + S Sbjct: 141 VVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSA 200 Query: 314 QCDQSAATVARNLLHGRITKLTTNDSV 394 Q V + I L D + Sbjct: 201 TMPQDVLEVTTKFMRDPIRILVKKDEL 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,883,709 Number of Sequences: 219361 Number of extensions: 1910622 Number of successful extensions: 5500 Number of sequences better than 10.0: 265 Number of HSP's better than 10.0 without gapping: 5308 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5482 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
