ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal41g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-31
2dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-31
3dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic D... 141 5e-31
4dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 5e-31
5ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predic... 109 2e-21
6dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 2e-21
7dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 2e-21
8dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mR... 109 2e-21
9ref|XM_466567.1| Oryza sativa (japonica cultivar-group), mRNA 101 5e-19
10gb|BT016822.1| Zea mays clone Contig655 mRNA sequence 101 5e-19
11dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic D... 101 5e-19
12gb|AY104803.1| Zea mays PCO064157 mRNA sequence 101 5e-19
13ref|NM_189491.1| Oryza sativa (japonica cultivar-group), predic... 100 2e-18
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-18
15dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-18
16emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 94 1e-16
17emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 94 1e-16
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 94 1e-16
19emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 94 1e-16
20gb|AY107400.1| Zea mays PCO125916 mRNA sequence 84 1e-13
21ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.006
23dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.006
24dbj|AK068044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.093
25gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 1.5
26ref|XM_389492.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 1.5
27emb|AL445204.3| Human DNA sequence from clone RP11-232K22 on chr... 40 1.5
28emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 1.5
29emb|AL805974.8| Mouse DNA sequence from clone RP23-334F21 on chr... 40 1.5
30gb|L27063.1|STMDNAGYR Streptomyces coelicolor dnaA-gyrA region 40 1.5
31ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group... 38 5.8
32ref|XM_477674.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.8
33ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group... 38 5.8
34ref|NM_026059.2| Mus musculus RIKEN cDNA 2900005J15 gene (290000... 38 5.8
35gb|AC116151.10| Mus musculus chromosome 5, clone RP24-84G9, comp... 38 5.8
36gb|BC106090.1| Mus musculus cDNA clone MGC:117722 IMAGE:30846110... 38 5.8
37ref|XM_582287.2| PREDICTED: Bos taurus similar to Huntingtin int... 38 5.8
38gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Ho... 38 5.8
39gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Ho... 38 5.8
40ref|NM_001010825.1| Mus musculus DNA segment, Chr 5, ERATO Doi 4... 38 5.8
41ref|XM_543446.2| PREDICTED: Canis familiaris similar to Huntingt... 38 5.8
42gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosom... 38 5.8
43gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, comple... 38 5.8
44gb|AC159240.3| Mus musculus BAC clone RP24-555M20 from chromosom... 38 5.8
45emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 38 5.8
46emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 38 5.8
47emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 38 5.8
48gb|AF200320.1| Bradyrhizobium japonicum IntA (intA) and PipA (pi... 38 5.8
49gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence 38 5.8
50gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 5.8
51gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 38 5.8
52dbj|AK013483.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 38 5.8
53dbj|AK087477.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 38 5.8
54dbj|AK076604.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 5.8
55dbj|AK015504.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 5.8
56dbj|AK054325.1| Mus musculus 2 days pregnant adult female ovary ... 38 5.8
57dbj|AK044446.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 38 5.8
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
59gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 38 5.8
60gb|BC094288.1| Mus musculus cDNA clone IMAGE:6439764 38 5.8
61gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosom... 38 5.8
62dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 5.8
63gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence 38 5.8
64dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 5.8
65dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
66dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
67dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
68dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
69gb|DP000020.1| Equus caballus target 1 genomic scaffold 38 5.8
70gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, com... 38 5.8 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 5e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                            
Query: 2        tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
                |||| ||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||
Sbjct: 23480973 tgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaaggtcg 23481032

                                                                            
Query: 62       acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
                 | ||||||||||||  |||  ||||||||| ||||||| ||||||||||||||||||||
Sbjct: 23481033 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagt 23481092

                   
Query: 122      cgc 124
                |||
Sbjct: 23481093 cgc 23481095



 Score =  101 bits (51), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                            
Query: 14       agctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgctccg 73
                |||||||||| ||||||| ||||||| | ||||||||| |||| |||| | |||||||||
Sbjct: 23410941 agctcttcctcctctcccgccccgacctcgacgacctcgccaatgtcgccctccgctccg 23411000

                                                                   
Query: 74       acgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
                | |  |||  ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 23411001 atgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagtcgc 23411051



 Score = 44.1 bits (22), Expect = 0.093
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 7        gcccacaagctcttcctgctctcccaccccgacg 40
                |||| |||||||||||| |||||||| |||||||
Sbjct: 23471204 gcccgcaagctcttcctcctctcccatcccgacg 23471237



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 65       tccgctccgacgtgctctccgccgtcaaatccg 97
                ||||||||||||| |||  ||||||||||||||
Sbjct: 23471269 tccgctccgacgtcctccacgccgtcaaatccg 23471301
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1791_B03
          Length = 166214

 Score =  141 bits (71), Expect = 5e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                         
Query: 2     tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
             |||| ||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||
Sbjct: 46656 tgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaaggtcg 46715

                                                                         
Query: 62    acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
              | ||||||||||||  |||  ||||||||| ||||||| ||||||||||||||||||||
Sbjct: 46716 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagt 46775

                
Query: 122   cgc 124
             |||
Sbjct: 46776 cgc 46778



 Score = 44.1 bits (22), Expect = 0.093
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 7     gcccacaagctcttcctgctctcccaccccgacg 40
             |||| |||||||||||| |||||||| |||||||
Sbjct: 36887 gcccgcaagctcttcctcctctcccatcccgacg 36920



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 65    tccgctccgacgtgctctccgccgtcaaatccg 97
             ||||||||||||| |||  ||||||||||||||
Sbjct: 36952 tccgctccgacgtcctccacgccgtcaaatccg 36984
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>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1653_F07, complete sequence
          Length = 110109

 Score =  141 bits (71), Expect = 5e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                         
Query: 2     tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
             |||| ||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||
Sbjct: 99648 tgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaaggtcg 99707

                                                                         
Query: 62    acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
              | ||||||||||||  |||  ||||||||| ||||||| ||||||||||||||||||||
Sbjct: 99708 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagt 99767

                
Query: 122   cgc 124
             |||
Sbjct: 99768 cgc 99770



 Score =  101 bits (51), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                         
Query: 14    agctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgctccg 73
             |||||||||| ||||||| ||||||| | ||||||||| |||| |||| | |||||||||
Sbjct: 29616 agctcttcctcctctcccgccccgacctcgacgacctcgccaatgtcgccctccgctccg 29675

                                                                
Query: 74    acgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
             | |  |||  ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 29676 atgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagtcgc 29726



 Score = 44.1 bits (22), Expect = 0.093
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 7     gcccacaagctcttcctgctctcccaccccgacg 40
             |||| |||||||||||| |||||||| |||||||
Sbjct: 89879 gcccgcaagctcttcctcctctcccatcccgacg 89912



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 65    tccgctccgacgtgctctccgccgtcaaatccg 97
             ||||||||||||| |||  ||||||||||||||
Sbjct: 89944 tccgctccgacgtcctccacgccgtcaaatccg 89976
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>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full
           insert sequence
          Length = 1371

 Score =  141 bits (71), Expect = 5e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
           |||| ||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||
Sbjct: 77  tgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaaggtcg 136

                                                                       
Query: 62  acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
            | ||||||||||||  |||  ||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagt 196

              
Query: 122 cgc 124
           |||
Sbjct: 197 cgc 199
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>ref|XM_472939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score =  109 bits (55), Expect = 2e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
           |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 55  cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 114

                                                                  
Query: 70  tccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
            |||| || ||| |||| |||||||||||||| |||||| | |||| ||||||||
Sbjct: 115 gccgatgtcctcgccgcagtcaaatccgatgatatggcgtctctgtacgagtcgc 169
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>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full
           insert sequence
          Length = 1510

 Score =  109 bits (55), Expect = 2e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
           |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 176 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 235

                                                                  
Query: 70  tccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
            |||| || ||| |||| |||||||||||||| |||||| | |||| ||||||||
Sbjct: 236 gccgatgtcctcgccgcagtcaaatccgatgatatggcgtctctgtacgagtcgc 290
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>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full
           insert sequence
          Length = 1515

 Score =  109 bits (55), Expect = 2e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
           |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 181 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 240

                                                                  
Query: 70  tccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
            |||| || ||| |||| |||||||||||||| |||||| | |||| ||||||||
Sbjct: 241 gccgatgtcctcgccgcagtcaaatccgatgatatggcgtctctgtacgagtcgc 295
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>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit7,
           complete cds
          Length = 1547

 Score =  109 bits (55), Expect = 2e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
           |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 139 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 198

                                                                  
Query: 70  tccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
            |||| || ||| |||| |||||||||||||| |||||| | |||| ||||||||
Sbjct: 199 gccgatgtcctcgccgcagtcaaatccgatgatatggcgtctctgtacgagtcgc 253
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>ref|XM_466567.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score =  101 bits (51), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                        
Query: 14   agctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgctccg 73
            |||||||||| ||||||| ||||||| | ||||||||| |||| |||| | |||||||||
Sbjct: 2000 agctcttcctcctctcccgccccgacctcgacgacctcgccaatgtcgccctccgctccg 2059

                                                               
Query: 74   acgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
            | |  |||  ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 2060 atgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagtcgc 2110
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>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence
          Length = 1636

 Score =  101 bits (51), Expect = 5e-19
 Identities = 105/123 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
           |||| ||||||||||||||||| || |||||||||  |||||| ||||||||||||||||
Sbjct: 170 tgctggcccacaagctcttccttctatcccacccctccgttgatgacctctccaaggtcg 229

                                                                       
Query: 62  acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
            | ||||| |||| || |||  | |||| ||||||||||| |||||| ||||||| ||||
Sbjct: 230 ccctccgcgccgaagtcctcgacaccgtgaaatccgatgatatggcgacgctgtttgagt 289

              
Query: 122 cgc 124
           |||
Sbjct: 290 cgc 292
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>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0038P01
          Length = 148506

 Score =  101 bits (51), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                          
Query: 14     agctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgctccg 73
              |||||||||| ||||||| ||||||| | ||||||||| |||| |||| | |||||||||
Sbjct: 124016 agctcttcctcctctcccgccccgacctcgacgacctcgccaatgtcgccctccgctccg 124075

                                                                 
Query: 74     acgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagtcgc 124
              | |  |||  ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 124076 atgccctcgacgccgtcaagtccgatggcatggcgccgctgttcgagtcgc 124126
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>gb|AY104803.1| Zea mays PCO064157 mRNA sequence
          Length = 1631

 Score =  101 bits (51), Expect = 5e-19
 Identities = 105/123 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
           |||| ||||||||||||||||| || |||||||||  |||||| ||||||||||||||||
Sbjct: 185 tgctggcccacaagctcttccttctatcccacccctccgttgatgacctctccaaggtcg 244

                                                                       
Query: 62  acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
            | ||||| |||| || |||  | |||| ||||||||||| |||||| ||||||| ||||
Sbjct: 245 ccctccgcgccgaagtcctcgacaccgtgaaatccgatgatatggcgacgctgtttgagt 304

              
Query: 122 cgc 124
           |||
Sbjct: 305 cgc 307
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>ref|NM_189491.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
           |||| ||||||||||||||||| ||||||||||||||| |  |||||||| ||||||| |
Sbjct: 386 tgctagcccacaagctcttcctcctctcccaccccgacctcaacgacctcgccaaggttg 445

                                                                       
Query: 62  acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
            | ||||||||||||  |||  ||||||||| ||||||| |||||||| ||| || ||||
Sbjct: 446 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgctgctatttgagt 505

             
Query: 122 cg 123
           ||
Sbjct: 506 cg 507
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                            
Query: 2        tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
                |||| ||||||||||||||||| ||||||||||||||| |  |||||||| ||||||| |
Sbjct: 43069784 tgctagcccacaagctcttcctcctctcccaccccgacctcaacgacctcgccaaggttg 43069843

                                                                            
Query: 62       acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
                 | ||||||||||||  |||  ||||||||| ||||||| |||||||| ||| || ||||
Sbjct: 43069844 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgctgctatttgagt 43069903

                  
Query: 122      cg 123
                ||
Sbjct: 43069904 cg 43069905
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>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                         
Query: 2     tgcttgcccacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcg 61
             |||| ||||||||||||||||| ||||||||||||||| |  |||||||| ||||||| |
Sbjct: 66813 tgctagcccacaagctcttcctcctctcccaccccgacctcaacgacctcgccaaggttg 66872

                                                                         
Query: 62    acatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgctgttcgagt 121
              | ||||||||||||  |||  ||||||||| ||||||| |||||||| ||| || ||||
Sbjct: 66873 ccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgctgctatttgagt 66932

               
Query: 122   cg 123
             ||
Sbjct: 66933 cg 66934
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>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 10    cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
             |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 38750 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 38809

                                            
Query: 70    tccgacgtgctctccgccgtcaaatccgatg 100
              |||| || ||| |||| |||||||||||||
Sbjct: 38810 gccgatgtcctcgccgcagtcaaatccgatg 38840
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                          
Query: 10     cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
              |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 105563 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 105622

                                             
Query: 70     tccgacgtgctctccgccgtcaaatccgatg 100
               |||| || ||| |||| |||||||||||||
Sbjct: 105623 gccgatgtcctcgccgcagtcaaatccgatg 105653
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                            
Query: 10       cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
                |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 24216338 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 24216397

                                               
Query: 70       tccgacgtgctctccgccgtcaaatccgatg 100
                 |||| || ||| |||| |||||||||||||
Sbjct: 24216398 gccgatgtcctcgccgcagtcaaatccgatg 24216428
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>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 10    cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
             |||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 10813 cacaagctgttcctgctctcgcacccggacgtggacgacctcgccaaggtcgacctccgc 10872

                                            
Query: 70    tccgacgtgctctccgccgtcaaatccgatg 100
              |||| || ||| |||| |||||||||||||
Sbjct: 10873 gccgatgtcctcgccgcagtcaaatccgatg 10903
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>gb|AY107400.1| Zea mays PCO125916 mRNA sequence
          Length = 1443

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacaagctcttcctgctctcccaccccgacgttgacgacctctccaaggtcgacatccgc 69
           |||||||| ||||| || || ||||||||||| ||||||||| ||||||||||| | |||
Sbjct: 99  cacaagctgttcctcctgtcgcaccccgacgtcgacgacctcgccaaggtcgacctacgc 158

                                                 
Query: 70  tccgacgtgctctccgccgtcaaatccgatgacatggc 107
            | |||||| || | || ||||||||||||||||||||
Sbjct: 159 gctgacgtgttcgcagcagtcaaatccgatgacatggc 196
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>ref|XM_483067.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                       
Query: 53  ccaaggtcgacatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgc 112
           ||||||||| | ||| ||||||||  |||  | ||||||| ||||||| |||||||| | 
Sbjct: 445 ccaaggtcgccctccactccgacgccctcgacaccgtcaagtccgatggcatggcgctgt 386

                       
Query: 113 tgttcgagtcgc 124
           ||||||||||||
Sbjct: 385 tgttcgagtcgc 374
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                            
Query: 53       ccaaggtcgacatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgc 112
                ||||||||| | ||| ||||||||  |||  | ||||||| ||||||| |||||||| | 
Sbjct: 24130430 ccaaggtcgccctccactccgacgccctcgacaccgtcaagtccgatggcatggcgctgt 24130371

                            
Query: 113      tgttcgagtcgc 124
                ||||||||||||
Sbjct: 24130370 tgttcgagtcgc 24130359
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                         
Query: 53    ccaaggtcgacatccgctccgacgtgctctccgccgtcaaatccgatgacatggcgccgc 112
             ||||||||| | ||| ||||||||  |||  | ||||||| ||||||| |||||||| | 
Sbjct: 83916 ccaaggtcgccctccactccgacgccctcgacaccgtcaagtccgatggcatggcgctgt 83857

                         
Query: 113   tgttcgagtcgc 124
             ||||||||||||
Sbjct: 83856 tgttcgagtcgc 83845
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>dbj|AK068044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132L02, full
           insert sequence
          Length = 1103

 Score = 44.1 bits (22), Expect = 0.093
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 7   gcccacaagctcttcctgctctcccaccccgacg 40
           |||| |||||||||||| |||||||| |||||||
Sbjct: 98  gcccgcaagctcttcctcctctcccatcccgacg 131



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 65  tccgctccgacgtgctctccgccgtcaaatccg 97
           ||||||||||||| |||  ||||||||||||||
Sbjct: 163 tccgctccgacgtcctccacgccgtcaaatccg 195
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ccgtcaaatccgatgacatg 105
              ||||||||||||||||||||
Sbjct: 613709 ccgtcaaatccgatgacatg 613728
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>ref|XM_389492.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09316.1)
           partial mRNA
          Length = 651

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 65  tccgctccgacgtgctctccgccgtcaaatcc 96
           |||||||||||||| || ||||| ||||||||
Sbjct: 146 tccgctccgacgtgatccccgccatcaaatcc 177
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>emb|AL445204.3| Human DNA sequence from clone RP11-232K22 on chromosome 13 Contains the
              3' end of a novel gene, complete sequence
          Length = 129923

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      gcccacaagctcttcctgctctcc 30
              ||||||||||||| ||||||||||
Sbjct: 127106 gcccacaagctctccctgctctcc 127129



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      gcccacaagctcttcctgctctcc 30
              ||||||||||||| ||||||||||
Sbjct: 127043 gcccacaagctctccctgctctcc 127066



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      gcccacaagctcttcctgctctcc 30
              ||||||||||||| ||||||||||
Sbjct: 126994 gcccacaagctctccctgctctcc 127017



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      gcccacaagctcttcctgctctcc 30
              ||||||||||||| ||||||||||
Sbjct: 126945 gcccacaagctctccctgctctcc 126968
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gcttgcccacaagctcttcc 22
             ||||||||||||||||||||
Sbjct: 41378 gcttgcccacaagctcttcc 41397
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>emb|AL805974.8| Mouse DNA sequence from clone RP23-334F21 on chromosome X, complete
             sequence
          Length = 95826

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tcttcctgctctcccacccc 36
             ||||||||||||||||||||
Sbjct: 68102 tcttcctgctctcccacccc 68083
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>gb|L27063.1|STMDNAGYR Streptomyces coelicolor dnaA-gyrA region
          Length = 8200

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   gcttgcccacaagctcttcc 22
           ||||||||||||||||||||
Sbjct: 421 gcttgcccacaagctcttcc 402
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>ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127
           mRNA
          Length = 1121

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 172 ctccaaggtcgacatccgc 190
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>ref|XM_477674.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1099

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 173 ctccaaggtcgacatccgc 191
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>ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127
           mRNA
          Length = 1103

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 174 ctccaaggtcgacatccgc 192
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>ref|NM_026059.2| Mus musculus RIKEN cDNA 2900005J15 gene (2900005J15Rik), mRNA
          Length = 2028

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ctcttcctgctctcccacc 34
           |||||||||||||||||||
Sbjct: 738 ctcttcctgctctcccacc 756
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>gb|AC116151.10| Mus musculus chromosome 5, clone RP24-84G9, complete sequence
          Length = 204954

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     ctcttcctgctctcccacc 34
              |||||||||||||||||||
Sbjct: 131323 ctcttcctgctctcccacc 131341
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>gb|BC106090.1| Mus musculus cDNA clone MGC:117722 IMAGE:30846110, complete cds
          Length = 3150

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 663 gcccacaagctcttcctgc 681
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>ref|XM_582287.2| PREDICTED: Bos taurus similar to Huntingtin interacting protein E
           (LOC505923), mRNA
          Length = 3352

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 793 gcccacaagctcttcctgc 811
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>gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 150308

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    ctcttcctgctctcccacc 34
             |||||||||||||||||||
Sbjct: 40807 ctcttcctgctctcccacc 40789
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>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237199

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ctcttcctgctctcccacc 34
             |||||||||||||||||||
Sbjct: 59336 ctcttcctgctctcccacc 59354
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>ref|NM_001010825.1| Mus musculus DNA segment, Chr 5, ERATO Doi 40, expressed
           (D5Ertd40e), mRNA
          Length = 3139

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 676 gcccacaagctcttcctgc 694
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>ref|XM_543446.2| PREDICTED: Canis familiaris similar to Huntingtin interacting
           protein E (LOC486320), mRNA
          Length = 2397

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 790 gcccacaagctcttcctgc 808
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>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence
          Length = 180794

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     ctcttcctgctctcccacc 34
              |||||||||||||||||||
Sbjct: 101620 ctcttcctgctctcccacc 101638
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>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence
          Length = 207960

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ctcttcctgctctcccacc 34
             |||||||||||||||||||
Sbjct: 17711 ctcttcctgctctcccacc 17729
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>gb|AC159240.3| Mus musculus BAC clone RP24-555M20 from chromosome 5, complete sequence
          Length = 197104

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      gcccacaagctcttcctgc 25
              |||||||||||||||||||
Sbjct: 193090 gcccacaagctcttcctgc 193072
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 100    gacatggcgccgctgttcg 118
              |||||||||||||||||||
Sbjct: 289714 gacatggcgccgctgttcg 289696
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 100    gacatggcgccgctgttcg 118
              |||||||||||||||||||
Sbjct: 201183 gacatggcgccgctgttcg 201165
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    gacatggcgccgctgttcg 118
              |||||||||||||||||||
Sbjct: 197306 gacatggcgccgctgttcg 197324
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>gb|AF200320.1| Bradyrhizobium japonicum IntA (intA) and PipA (pipA) genes,
           complete cds; and unknown genes
          Length = 6678

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 12  caagctcttcctgctctcc 30
           |||||||||||||||||||
Sbjct: 83  caagctcttcctgctctcc 101
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>gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence
          Length = 123244

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 18   cttcctgctctcccacccc 36
            |||||||||||||||||||
Sbjct: 2207 cttcctgctctcccacccc 2189
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 100     gacatggcgccgctgttcg 118
               |||||||||||||||||||
Sbjct: 2399519 gacatggcgccgctgttcg 2399537
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     cccaccccgacgttgacga 47
              |||||||||||||||||||
Sbjct: 116034 cccaccccgacgttgacga 116016
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>dbj|AK013483.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900005J15
           product:unclassifiable, full insert sequence
          Length = 1226

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ctcttcctgctctcccacc 34
           |||||||||||||||||||
Sbjct: 746 ctcttcctgctctcccacc 764
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>dbj|AK087477.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130304A01 product:hypothetical TPR
           repeat containing protein, full insert sequence
          Length = 3139

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 676 gcccacaagctcttcctgc 694
to top
>dbj|AK076604.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921531M11 product:hypothetical protein,
           full insert sequence
          Length = 2028

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ctcttcctgctctcccacc 34
           |||||||||||||||||||
Sbjct: 738 ctcttcctgctctcccacc 756
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>dbj|AK015504.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930465D24 product:hypothetical protein,
           full insert sequence
          Length = 1813

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ctcttcctgctctcccacc 34
           |||||||||||||||||||
Sbjct: 262 ctcttcctgctctcccacc 280
to top
>dbj|AK054325.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330015C23
           product:HUNTINGTIN INTERACTING PROTEIN HYPE (FRAGMENT)
           homolog [Homo sapiens], full insert sequence
          Length = 2537

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 457 gcccacaagctcttcctgc 475
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>dbj|AK044446.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930013L13 product:Huntingtin interacting protein
           HYPE homolog, full insert sequence
          Length = 2773

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 7   gcccacaagctcttcctgc 25
           |||||||||||||||||||
Sbjct: 501 gcccacaagctcttcctgc 519
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 51       ctccaaggtcgacatccgc 69
                |||||||||||||||||||
Sbjct: 13045241 ctccaaggtcgacatccgc 13045259
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 60     cgacatccgctccgacgtgctctccgccgtc 90
              ||||| ||||| | |||||||||||||||||
Sbjct: 366126 cgacacccgcttctacgtgctctccgccgtc 366156
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>gb|BC094288.1| Mus musculus cDNA clone IMAGE:6439764
          Length = 1285

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ctcttcctgctctcccacc 34
           |||||||||||||||||||
Sbjct: 780 ctcttcctgctctcccacc 798
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>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence
          Length = 181229

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     ctcttcctgctctcccacc 34
              |||||||||||||||||||
Sbjct: 118826 ctcttcctgctctcccacc 118844
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 3       gcttgcccacaagctcttc 21
               |||||||||||||||||||
Sbjct: 5290515 gcttgcccacaagctcttc 5290497
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>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence
          Length = 171209

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     cttcctgctctcccacccc 36
              |||||||||||||||||||
Sbjct: 153374 cttcctgctctcccacccc 153356
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      caagctcttcctgctctcc 30
               |||||||||||||||||||
Sbjct: 5016876 caagctcttcctgctctcc 5016858
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0077F02
          Length = 172442

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     ctccaaggtcgacatccgc 69
              |||||||||||||||||||
Sbjct: 119538 ctccaaggtcgacatccgc 119556
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>dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D02, full
           insert sequence
          Length = 1099

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 173 ctccaaggtcgacatccgc 191
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>dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066C05, full
           insert sequence
          Length = 1122

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 172 ctccaaggtcgacatccgc 190
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>dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D04, full
           insert sequence
          Length = 1103

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  ctccaaggtcgacatccgc 69
           |||||||||||||||||||
Sbjct: 174 ctccaaggtcgacatccgc 192
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 18      cttcctgctctcccacccc 36
               |||||||||||||||||||
Sbjct: 1786018 cttcctgctctcccacccc 1786000
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>gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, complete sequence
          Length = 224918

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     gcccacaagctcttcctgc 25
             |||||||||||||||||||
Sbjct: 77977 gcccacaagctcttcctgc 77959


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 666,738
Number of Sequences: 3902068
Number of extensions: 666738
Number of successful extensions: 50601
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50061
Number of HSP's gapped (non-prelim): 540
length of query: 124
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 103
effective length of database: 17,151,101,840
effective search space: 1766563489520
effective search space used: 1766563489520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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